FvH4_6g44710

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000132
Physical Location & Seq
Reverse (-)
34441051 .. 34443267
2217 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g44710.t1

Sequence Viewer

Length: 1566 bp
ATGGAACTACAATGCCCTTCCTTCCAGGTCCTGTTTACTTCTTTCTTGCTACTTGTGATTCTGCTACTGAAAATAGGGAAGAGAGGCCACAACAACAACTCCTCTGCTTCAAAGCTGCTACCAGGGCCATGGAAGCTACCAATTATTGGAAACATACACCAGCTCATTGGCGCTCTACCCCATCGAGGACTCAGAGACTTGGCCAAGAAACATGGACCTCTTATGCACCTGAGGCTCGGAGAGGTTTCCACAGTTGTTGTTTCATCAGCAAAGTTTGCTGAAGAGGTGATGAAAACCCATGATATTATATTTGCATCAAGGCCCGAGGTCATTGCTTCAAGAATCATATCATATAATTCTACTGATATTGTATTTGCTCCATATGGTGATTACTGGAGAAGATTGCGAAAAATTTGCACACAGGAGCTCTTAAGTGCAAAGCGGGTTCAATCTTACCGGCCTATTAGGGAAAGAGAGGTACTGAGTCTCATAGAATGGATTGGTTCAAGAGCAGGATCACCTATTAATCTTACTCAGAAAGTTATTTCTTCCATATATGCCATCACTTCACAAGCTGCCTTTGGTGATCGATGCAATGAGGATCAAGAAGTTTTCAAATATGTGATGAAGGAAGCTAATAAGGCAGCATCAGGCTTCAATGTGGCAGATGTTTTTCCTTCTTTCAAATTACTTCATATGATAAGTGGAGTGCAGTCTAAACTGGAGATGCTGCACAAACAAGCTGATAGAATACTGGAAACATTCATCAAAGAACATACACAAGCTACAGCAACAGAAAAAAGTGATGAGGCAGAAGTACAGGAAGATCTGCTCGATGTTCTCCTAAAATTTCACGTCGACCATAATGGTGGCCATGAGCTTTCTTTAACTACTGACAACATCAAAGCAGTGACCTTGGATATTTTTACCGCTGGGAGTGAGACATCAGCTACGACTGTAGATTGGTCAATGTCAGAAATGATCAAAAATCCGAGAATCATGAAAAAGGCACAGGATGAGGTGAGGGAAGTGTTCAACAGAACACAGCAAGTAAACGAAACAAGCATTAGAGAGATGAAATATTTAAAGTTGGTTATTCAAGAGTCAATGAGGTTACACCCTCCTGGTCCCCTGTTAGCTCCAAGAGAATGTGGAGAGAAGTGTGAGATTGATGGATATGAAATACCTGTGAAAACAAAGGTAATCGTGAATGCTTGGGCAATCGGAAGAGATCCCAATCACTGGACTGAGTCGGAGACCTTTAATCCGGAGAGATTCCTTGATAGCTCTATTGACTACCAAGGAACAAACTTTAATTTCATCCCATTTGGTGCTGGAAGGAGATTATGCCCTGGCATATTATTTGGTCTGGCTAATGTTGAGCTCCCACTAGCAATGTTATTATATCATTTTGATTGGAAACTCCCCAATGGAATGAAGGATGAAGACCTGGACATGACTGAGGAATTCGGCGCTGTAGTCCGCAGAAAACATGATCTGCATTTGATTCCCACACCTTATCATCGTCCTCCTCCGACTGATGCAAATTCAAATATAGAAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

522

Amino Acids

58.98

Weight (kDa)

6.54

Isoelectric Point (pI)

38.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 495 3.4e-101 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 146, 1242
AccI GTMKAC 1 cut(s) 858
AccIII TCCGGA 1 cut(s) 1267
AciI CCGC 3 cut(s) 442, 930, 1483
AclWI GGATC 3 cut(s) 523, 609, 1226
AcoI YGGCCR 2 cut(s) 201, 871
AcsI RAATTY 4 cut(s) 411, 848, 1466, 1546
AcuI CTGAAG 1 cut(s) 300
AfaI GTAC 2 cut(s) 480, 819
AfiI CCNNNNNNNGG 3 cut(s) 146, 185, 1242
AflII CTTAAG 1 cut(s) 430
AjiI CACGTC 1 cut(s) 856
AjnI CCWGG 5 cut(s) 24, 121, 1123, 1351, 1449
Alw21I GWGCWC 2 cut(s) 429, 1386
Alw26I GTCTC 4 cut(s) 189, 491, 935, 1250
AlwI GGATC 3 cut(s) 523, 609, 1226
AlwNI CAGNNNCTG 1 cut(s) 31
Ama87I CYCGRG 1 cut(s) 323
Aor13HI TCCGGA 1 cut(s) 1267
AoxI GGCC 6 cut(s) 85, 125, 201, 320, 458, 871
ApeKI GCWGC 4 cut(s) 115, 575, 644, 730
ApoI RAATTY 4 cut(s) 411, 848, 1466, 1546
AseI ATTAAT 1 cut(s) 525
AspLEI GCGC 2 cut(s) 173, 1475
AspS9I GGNCC 5 cut(s) 28, 125, 215, 321, 1127
AsuHPI GGTGA 5 cut(s) 298, 398, 510, 596, 1033
AvaI CYCGRG 1 cut(s) 323
AvaII GGWCC 3 cut(s) 28, 215, 1127
AxyI CCTNAGG 1 cut(s) 230
BalI TGGCCA 2 cut(s) 203, 873
BanII GRGCYC 2 cut(s) 429, 1386
BbsI GAAGAC 1 cut(s) 1452
Bbv12I GWGCWC 2 cut(s) 429, 1386
BbvI GCAGC 4 cut(s) 102, 562, 656, 717
BccI CCATC 3 cut(s) 189, 569, 1166
BcgI CGANNNNNNTGC 4 cut(s) 314, 348, 396, 430
BciT130I CCWGG 5 cut(s) 26, 123, 1125, 1353, 1451
BclI TGATCA 1 cut(s) 981
BcoDI GTCTC 4 cut(s) 189, 491, 935, 1250
BfaI CTAG 1 cut(s) 1391
BfmI CTRYAG 3 cut(s) 786, 957, 1476
BfoI RGCGCY 2 cut(s) 174, 1476
BfrI CTTAAG 1 cut(s) 430
BglII AGATCT 1 cut(s) 826
BisI GCNGC 4 cut(s) 116, 576, 645, 731
BlsI GCNGC 4 cut(s) 117, 577, 646, 732
Bme1390I CCNGG 5 cut(s) 26, 123, 1125, 1353, 1451
Bme18I GGWCC 3 cut(s) 28, 215, 1127
BmeT110I CYCGRG 1 cut(s) 323
BmgBI CACGTC 1 cut(s) 856
BmgT120I GGNCC 5 cut(s) 28, 125, 215, 321, 1127
BmiI GGNNCC 1 cut(s) 1129
BmrFI CCNGG 5 cut(s) 26, 123, 1125, 1353, 1451
BmsI GCATC 5 cut(s) 323, 581, 656, 717, 1531
BpiI GAAGAC 1 cut(s) 1452
BpmI CTGGAG 2 cut(s) 415, 743
Bsa29I ATCGAT 1 cut(s) 589
BsaBI GATNNNNATC 1 cut(s) 1236
BsaI GGTCTC 1 cut(s) 1250
BsaJI CCNNGG 6 cut(s) 122, 128, 324, 915, 1300, 1351
BsaWI WCCGGW 1 cut(s) 1267
BsaXI ACNNNNNCTCC 2 cut(s) 83, 113
Bsc4I CCNNNNNNNGG 3 cut(s) 146, 185, 1242
Bse118I RCCGGY 1 cut(s) 456
Bse1I ACTGG 4 cut(s) 398, 726, 759, 1247
Bse21I CCTNAGG 1 cut(s) 230
Bse3DI GCAATG 3 cut(s) 330, 601, 1401
Bse8I GATNNNNATC 1 cut(s) 1236
BseAI TCCGGA 1 cut(s) 1267
BseBI CCWGG 5 cut(s) 26, 123, 1125, 1353, 1451
BseCI ATCGAT 1 cut(s) 589
BseDI CCNNGG 6 cut(s) 122, 128, 324, 915, 1300, 1351
BseGI GGATG 3 cut(s) 1021, 1320, 1447
BseJI GATNNNNATC 1 cut(s) 1236
BseLI CCNNNNNNNGG 3 cut(s) 146, 185, 1242
BseMI GCAATG 3 cut(s) 330, 601, 1401
BseMII CTCAG 6 cut(s) 205, 221, 473, 548, 1239, 1452
BseNI ACTGG 4 cut(s) 398, 726, 759, 1247
BseRI GAGGAG 2 cut(s) 91, 1521
BseXI GCAGC 4 cut(s) 102, 562, 656, 717
BseYI CCCAGC 1 cut(s) 932
BsgI GTGCAG 2 cut(s) 716, 731
BshFI GGCC 6 cut(s) 87, 127, 203, 322, 460, 873
BshVI ATCGAT 1 cut(s) 589
BsiHKAI GWGCWC 2 cut(s) 429, 1386
BsiHKCI CYCGRG 1 cut(s) 323
BsiSI CCGG 2 cut(s) 457, 1268
BslFI GGGAC 1 cut(s) 1113
BslI CCNNNNNNNGG 3 cut(s) 146, 185, 1242
BsmAI GTCTC 4 cut(s) 189, 491, 935, 1250
BsmFI GGGAC 1 cut(s) 1113
BsmI GAATGC 1 cut(s) 1216
BsnI GGCC 6 cut(s) 87, 127, 203, 322, 460, 873
Bso31I GGTCTC 1 cut(s) 1250
BsoBI CYCGRG 1 cut(s) 323
Bsp1286I GDGCHC 2 cut(s) 429, 1386
Bsp13I TCCGGA 1 cut(s) 1267
Bsp143I GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
Bsp19I CCATGG 1 cut(s) 128
BspACI CCGC 3 cut(s) 442, 930, 1483
BspANI GGCC 6 cut(s) 87, 127, 203, 322, 460, 873
BspCNI CTCAG 6 cut(s) 204, 222, 474, 547, 1240, 1453
BspDI ATCGAT 1 cut(s) 589
BspEI TCCGGA 1 cut(s) 1267
BspHI TCATGA 1 cut(s) 999
BspLI GGNNCC 1 cut(s) 1129
BspPI GGATC 3 cut(s) 523, 609, 1226
BspTI CTTAAG 1 cut(s) 430
BspTNI GGTCTC 1 cut(s) 1250
BsrDI GCAATG 3 cut(s) 330, 601, 1401
BsrFI RCCGGY 1 cut(s) 456
BsrI ACTGG 4 cut(s) 398, 726, 759, 1247
BssAI RCCGGY 1 cut(s) 456
BssECI CCNNGG 6 cut(s) 122, 128, 324, 915, 1300, 1351
BssMI GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
BssT1I CCWWGG 3 cut(s) 128, 915, 1300
Bst2UI CCWGG 5 cut(s) 26, 123, 1125, 1353, 1451
Bst4CI ACNGT 2 cut(s) 253, 958
Bst6I CTCTTC 3 cut(s) 74, 276, 1222
BstAFI CTTAAG 1 cut(s) 430
BstAPI GCANNNNNTGC 1 cut(s) 275
BstDEI CTNAG 6 cut(s) 191, 230, 482, 534, 1248, 1461
BstDSI CCRYGG 1 cut(s) 128
BstF5I GGATG 3 cut(s) 1021, 1320, 1447
BstH2I RGCGCY 2 cut(s) 174, 1476
BstHHI GCGC 2 cut(s) 173, 1475
BstKTI GATC 7 cut(s) 518, 589, 604, 829, 984, 1234, 1498
BstMAI GTCTC 4 cut(s) 189, 491, 935, 1250
BstMBI GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
BstMWI GCNNNNNNNGC 5 cut(s) 124, 133, 232, 275, 641
BstNI CCWGG 5 cut(s) 26, 123, 1125, 1353, 1451
BstSCI CCNGG 5 cut(s) 24, 121, 1123, 1351, 1449
BstSFI CTRYAG 3 cut(s) 786, 957, 1476
BstV1I GCAGC 4 cut(s) 102, 562, 656, 717
BstV2I GAAGAC 1 cut(s) 1452
BstX2I RGATCY 2 cut(s) 826, 1231
BstXI CCANNNNNNTGG 3 cut(s) 129, 167, 869
BstYI RGATCY 2 cut(s) 826, 1231
Bsu15I ATCGAT 1 cut(s) 589
Bsu36I CCTNAGG 1 cut(s) 230
BsuRI GGCC 6 cut(s) 87, 127, 203, 322, 460, 873
BsuTUI ATCGAT 1 cut(s) 589
BtgI CCRYGG 1 cut(s) 128
BtrI CACGTC 1 cut(s) 856
BtsCI GGATG 3 cut(s) 1021, 1320, 1447
BtsI GCAGTG 1 cut(s) 915
BtsIMutI CAGTG 2 cut(s) 915, 1240
CaiI CAGNNNCTG 1 cut(s) 31
CciI TCATGA 1 cut(s) 999
CfoI GCGC 2 cut(s) 173, 1475
Cfr10I RCCGGY 1 cut(s) 456
Cfr13I GGNCC 5 cut(s) 28, 125, 215, 321, 1127
ClaI ATCGAT 1 cut(s) 589
Csp6I GTAC 2 cut(s) 479, 818
CspCI CAANNNNNGTGG 2 cut(s) 238, 273
CviAII CATG 7 cut(s) 129, 212, 299, 875, 1000, 1456, 1493
CviQI GTAC 2 cut(s) 479, 818
DdeI CTNAG 6 cut(s) 191, 230, 482, 534, 1248, 1461
DpnI GATC 7 cut(s) 517, 588, 603, 828, 983, 1233, 1497
DpnII GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
DraI TTTAAA 1 cut(s) 1086
EaeI YGGCCR 2 cut(s) 201, 871
Eam1104I CTCTTC 3 cut(s) 74, 276, 1222
EarI CTCTTC 3 cut(s) 74, 276, 1222
Ecl136II GAGCTC 2 cut(s) 427, 1384
Eco130I CCWWGG 3 cut(s) 128, 915, 1300
Eco24I GRGCYC 2 cut(s) 429, 1386
Eco31I GGTCTC 1 cut(s) 1250
Eco47I GGWCC 3 cut(s) 28, 215, 1127
Eco53kI GAGCTC 2 cut(s) 427, 1384
Eco57I CTGAAG 1 cut(s) 300
Eco81I CCTNAGG 1 cut(s) 230
Eco88I CYCGRG 1 cut(s) 323
EcoICRI GAGCTC 2 cut(s) 427, 1384
EcoO109I RGGNCCY 1 cut(s) 28
EcoRI GAATTC 1 cut(s) 1466
EcoRII CCWGG 5 cut(s) 24, 121, 1123, 1351, 1449
EcoT14I CCWWGG 3 cut(s) 128, 915, 1300
EcoT38I GRGCYC 2 cut(s) 429, 1386
ErhI CCWWGG 3 cut(s) 128, 915, 1300
FaeI CATG 7 cut(s) 132, 215, 302, 878, 1003, 1459, 1496
FaqI GGGAC 1 cut(s) 1113
FatI CATG 7 cut(s) 128, 211, 298, 874, 999, 1455, 1492
FauI CCCGC 1 cut(s) 435
FauNDI CATATG 2 cut(s) 382, 696
FbaI TGATCA 1 cut(s) 981
FblI GTMKAC 1 cut(s) 858
Fnu4HI GCNGC 4 cut(s) 116, 576, 645, 731
FokI GGATG 3 cut(s) 1028, 1307, 1454
FriOI GRGCYC 2 cut(s) 429, 1386
Fsp4HI GCNGC 4 cut(s) 116, 576, 645, 731
FspBI CTAG 1 cut(s) 1391
GlaI GCGC 2 cut(s) 172, 1474
GluI GCNGC 4 cut(s) 116, 576, 645, 731
GsaI CCCAGC 1 cut(s) 936
GsuI CTGGAG 2 cut(s) 415, 743
HaeII RGCGCY 2 cut(s) 174, 1476
HaeIII GGCC 6 cut(s) 87, 127, 203, 322, 460, 873
HapII CCGG 2 cut(s) 457, 1268
HhaI GCGC 2 cut(s) 173, 1475
Hin1II CATG 7 cut(s) 132, 215, 302, 878, 1003, 1459, 1496
Hin6I GCGC 2 cut(s) 171, 1473
HinP1I GCGC 2 cut(s) 171, 1473
HincII GTYRAC 1 cut(s) 859
HindII GTYRAC 1 cut(s) 859
HinfI GANTC 9 cut(s) 58, 189, 342, 484, 996, 1103, 1250, 1275, 1507
HpaII CCGG 2 cut(s) 457, 1268
HphI GGTGA 5 cut(s) 298, 398, 510, 596, 1033
Hpy166II GTNNAC 3 cut(s) 36, 859, 1054
Hpy188I TCNGA 8 cut(s) 194, 239, 537, 976, 993, 1226, 1255, 1536
Hpy188III TCNNGA 7 cut(s) 339, 507, 605, 1000, 1100, 1207, 1268
Hpy8I GTNNAC 3 cut(s) 36, 859, 1054
Hpy99I CGWCG 1 cut(s) 860
HpyAV CCTTC 6 cut(s) 27, 31, 622, 687, 1332, 1432
HpyCH4III ACNGT 2 cut(s) 253, 958
HpyCH4IV ACGT 1 cut(s) 855
HpyCH4V TGCA 9 cut(s) 226, 314, 417, 437, 594, 712, 733, 1501, 1544
HpyF10VI GCNNNNNNNGC 5 cut(s) 124, 133, 232, 275, 641
HpyF3I CTNAG 6 cut(s) 191, 230, 482, 534, 1248, 1461
HpySE526I ACGT 1 cut(s) 855
Hsp92II CATG 7 cut(s) 132, 215, 302, 878, 1003, 1459, 1496
HspAI GCGC 2 cut(s) 171, 1473
Kpn2I TCCGGA 1 cut(s) 1267
Ksp22I TGATCA 1 cut(s) 981
Kzo9I GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
LmnI GCTCC 4 cut(s) 382, 424, 1144, 1389
Lsp1109I GCAGC 4 cut(s) 102, 562, 656, 717
LweI GCATC 5 cut(s) 323, 581, 656, 717, 1531
MaeI CTAG 1 cut(s) 1391
MaeII ACGT 1 cut(s) 855
MaeIII GTNAC 2 cut(s) 910, 1113
MalI GATC 7 cut(s) 517, 588, 603, 828, 983, 1233, 1497
MboI GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
MboII GAAGA 7 cut(s) 91, 293, 411, 540, 836, 1239, 1457
MflI RGATCY 2 cut(s) 826, 1231
MhlI GDGCHC 2 cut(s) 429, 1386
MlsI TGGCCA 2 cut(s) 203, 873
MluCI AATT 8 cut(s) 141, 355, 411, 686, 848, 1315, 1466, 1546
MluNI TGGCCA 2 cut(s) 203, 873
MlyI GAGTC 4 cut(s) 183, 493, 1112, 1259
MmeI TCCRAC 2 cut(s) 1233, 1559
Mox20I TGGCCA 2 cut(s) 203, 873
MroI TCCGGA 1 cut(s) 1267
MscI TGGCCA 2 cut(s) 203, 873
MseI TTAA 6 cut(s) 431, 525, 887, 1085, 1263, 1314
MslI CAYNNNNRTG 1 cut(s) 867
Msp20I TGGCCA 2 cut(s) 203, 873
MspA1I CMGCKG 1 cut(s) 932
MspCI CTTAAG 1 cut(s) 430
MspI CCGG 2 cut(s) 457, 1268
MspR9I CCNGG 5 cut(s) 26, 123, 1125, 1353, 1451
Mva1269I GAATGC 1 cut(s) 1216
MvaI CCWGG 5 cut(s) 26, 123, 1125, 1353, 1451
MwoI GCNNNNNNNGC 5 cut(s) 124, 133, 232, 275, 641
NcoI CCATGG 1 cut(s) 128
NdeI CATATG 2 cut(s) 382, 696
NdeII GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
NlaIII CATG 7 cut(s) 132, 215, 302, 878, 1003, 1459, 1496
NlaIV GGNNCC 1 cut(s) 1129
NmuCI GTSAC 1 cut(s) 910
PagI TCATGA 1 cut(s) 999
PctI GAATGC 1 cut(s) 1216
PfeI GAWTC 5 cut(s) 58, 342, 996, 1275, 1507
PflFI GACNNNGTC 1 cut(s) 1249
PflMI CCANNNNNTGG 2 cut(s) 146, 1242
PkrI GCNGC 4 cut(s) 117, 577, 646, 732
PleI GAGTC 4 cut(s) 183, 492, 1111, 1258
PpsI GAGTC 4 cut(s) 183, 492, 1111, 1258
PpuMI RGGWCCY 1 cut(s) 28
PshBI ATTAAT 1 cut(s) 525
Psp124BI GAGCTC 2 cut(s) 429, 1386
Psp5II RGGWCCY 1 cut(s) 28
Psp6I CCWGG 5 cut(s) 24, 121, 1123, 1351, 1449
PspFI CCCAGC 1 cut(s) 932
PspGI CCWGG 5 cut(s) 24, 121, 1123, 1351, 1449
PspN4I GGNNCC 1 cut(s) 1129
PspPI GGNCC 5 cut(s) 28, 125, 215, 321, 1127
PspPPI RGGWCCY 1 cut(s) 28
PstNI CAGNNNCTG 1 cut(s) 31
PsuI RGATCY 2 cut(s) 826, 1231
PsyI GACNNNGTC 1 cut(s) 1249
RsaI GTAC 2 cut(s) 480, 819
RsaNI GTAC 2 cut(s) 479, 818
RseI CAYNNNNRTG 1 cut(s) 867
SacI GAGCTC 2 cut(s) 429, 1386
SalI GTCGAC 1 cut(s) 857
SaqAI TTAA 6 cut(s) 431, 525, 887, 1085, 1263, 1314
SatI GCNGC 4 cut(s) 116, 576, 645, 731
Sau3AI GATC 7 cut(s) 515, 586, 601, 826, 981, 1231, 1495
Sau96I GGNCC 5 cut(s) 28, 125, 215, 321, 1127
SchI GAGTC 4 cut(s) 183, 493, 1112, 1259
ScrFI CCNGG 5 cut(s) 26, 123, 1125, 1353, 1451
SduI GDGCHC 2 cut(s) 429, 1386
SfaNI GCATC 5 cut(s) 323, 581, 656, 717, 1531
SfcI CTRYAG 3 cut(s) 786, 957, 1476
SinI GGWCC 3 cut(s) 28, 215, 1127
SmiMI CAYNNNNRTG 1 cut(s) 867
SmlI CTYRAG 1 cut(s) 430
SmoI CTYRAG 1 cut(s) 430
Sse9I AATT 8 cut(s) 141, 355, 411, 686, 848, 1315, 1466, 1546
SsiI CCGC 3 cut(s) 442, 930, 1483
SspI AATATT 1 cut(s) 1082
SspMI CTAG 1 cut(s) 1391
SstI GAGCTC 2 cut(s) 429, 1386
StyD4I CCNGG 5 cut(s) 24, 121, 1123, 1351, 1449
StyI CCWWGG 3 cut(s) 128, 915, 1300
TaaI ACNGT 2 cut(s) 253, 958
TaiI ACGT 1 cut(s) 858
TaqI TCGA 4 cut(s) 184, 589, 834, 858
TasI AATT 8 cut(s) 141, 355, 411, 686, 848, 1315, 1466, 1546
TatI WGTACW 1 cut(s) 817
TfiI GAWTC 5 cut(s) 58, 342, 996, 1275, 1507
Tru1I TTAA 6 cut(s) 431, 525, 887, 1085, 1263, 1314
Tru9I TTAA 6 cut(s) 431, 525, 887, 1085, 1263, 1314
TscAI CASTG 2 cut(s) 915, 1247
TseFI GTSAC 1 cut(s) 910
TseI GCWGC 4 cut(s) 115, 575, 644, 730
Tsp45I GTSAC 1 cut(s) 910
TspRI CASTG 2 cut(s) 915, 1247
Tth111I GACNNNGTC 1 cut(s) 1249
Van91I CCANNNNNTGG 2 cut(s) 146, 1242
Vha464I CTTAAG 1 cut(s) 430
VpaK11BI GGWCC 3 cut(s) 28, 215, 1127
VspI ATTAAT 1 cut(s) 525
XapI RAATTY 4 cut(s) 411, 848, 1466, 1546
XmiI GTMKAC 1 cut(s) 858
XspI CTAG 1 cut(s) 1391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.