MD04G1245500.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000132
Physical Location & Seq
Forward (+)
32105121 .. 32107013
1893 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1245500.v1.1.491

Sequence Viewer

Length: 1560 bp
ATGTCTCTAATGCTCGACATCCAAATTTTTTTCCTCGCTGTAATATTTACTTGTCTGGTCGCCCTTGTTACCCCCCTTGTTATATATTGGAAGAGGCATGCTACTAGTACTACAACTGTTCGGCTGCCCCCGGGGCCATGGAAGGTGCCTCTCATCGGAAACTTGCATCAAATGGCCGCCAGCTCTTTACCCCATCACTGCATGACAGACTTGGCCAACAAGTATGGCCCTATCATGCACCTCAAACTGGGACAACTCTCAGCCGTAGTCATTTCATCGCCGGAATTTGTTCAAGAGATGCTGAAGACGCATGATGTTGCTTTCTCACAACGCCCAACGTTTCTTGCTGCTGAAATTTTGTCCTATAATTCAGGGATCATCTTTTCTCCTTATAACGATTTTTGGAGACAAATGCGAAAGATTTGCATGCTGGAGCTCCTTAGTGCAAAACGCGTGGAGTCATTTGCATCAATAAGACAAGAAGAGGCATCAAATCTTGTTGAATCAATTTCCTTATCAGATGGTCATCCGTTCAATCTCAGTGAAATGATCTTCTCCCTGCAAAGCGTCATTATTGCCCGTGCGGCCTTTGGAAAGAAGTGCAAGTATCAACAAGAGTTTTTATCACAGCTCCAGGATGCAGTTAGGCTTGCAGCAGAATTTGATGTGCCGGATTTGTTCCCTTCACTCAAATTCCTCCGTTATGTCATAAATTTGAAGCCTGCGGTTGAGAAAGTACACCAGAAAATGGACAAGATCCTTGATGAAATTATCAGCGATCATAGAGTGAAAAGAAATGAGGAATCAGCTGCCGGAGACGACCATCAGGAAGATATAGTTGATGTGCTACTGCGGCTCCAGGAGTCTGGTGAGCTCCAATTTGATCTCACAACCACCCAAATCAAAGCTGTCACCCTGGACATGTTTTCTGCTGGAAGTGAGACTTCAGCAACTACTACAGAATGGGCAATGGCTGAACTTCTGAGAAGTCCAAGAGCAATGAAAAAAGCACAGGCCGAGGTACGCCAACTTGTCGGAGGAAAGGGGAAGATTGAAGAGTCAGACATTAAGAAACTCGACTACTTAAATTTGGTCATAAGGGAAACTCTACGATTACACCCTCCTCCCTTCATCCCAAGACAAGCAAGCGAAAAATGCACTATTGGCGGGTATGATATACCAACTGAAGCAACAGTCTTCATCAATGCTTGGGGAATTGGGAGAGACCCCAAGTATTGGGAGAATGCTGATTGTTTTCTGCCGGAGAGATTCCAAGGCTCTTCTGTTGATTTTCGAGGGACCAACTTTGAATTGGTTCCATCTGGGGGTGGCAGGAGAATGTGTCCAGGCATATCATTTGCAACCGCAAGTATTGAACTTGCACTTTCTCATCTGCTCTACCACTTTGACTGGAAACTCCCCAATGCAAATGGCAGTAGCAATGAGACAAAGTTATTAGAAGAGCTTGATATGACTGAATGTAAGGGATTGAATGTTAGGAAGAAGAATAACTTGTATCTTATCGCCATTCCATTCATTTCGTCCTCAGAAATGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko00590 ko00591 ko01100 ko04212 ko04726 ko04750 ko04913 ko04917 ko04927 ko04934 map00140 map00590 map00591 map01100 map04212 map04726 map04750 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

520

Amino Acids

58.44

Weight (kDa)

6.15

Isoelectric Point (pI)

45.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 43 - 477 1.3e-97 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 393
AccB1I GGYRCC 1 cut(s) 145
AccB7I CCANNNNNTGG 2 cut(s) 748, 1236
AccII CGCG 1 cut(s) 453
AciI CCGC 6 cut(s) 177, 584, 725, 853, 1167, 1365
AclI AACGTT 1 cut(s) 338
AclWI GGATC 2 cut(s) 383, 751
AcoI YGGCCR 2 cut(s) 174, 213
AcsI RAATTY 7 cut(s) 24, 284, 354, 659, 692, 712, 1087
AcuI CTGAAG 3 cut(s) 323, 930, 1206
AfaI GTAC 3 cut(s) 109, 738, 1023
AfiI CCNNNNNNNGG 5 cut(s) 155, 247, 748, 1236, 1325
AflIII ACRYGT 2 cut(s) 451, 921
AgsI TTSAA 8 cut(s) 293, 503, 535, 718, 1055, 1310, 1376, 1492
AhlI ACTAGT 1 cut(s) 104
AjnI CCWGG 4 cut(s) 633, 858, 915, 1345
AluBI AGCT 7 cut(s) 183, 436, 631, 809, 874, 908, 1465
AluI AGCT 7 cut(s) 183, 436, 631, 809, 874, 908, 1465
Alw21I GWGCWC 2 cut(s) 438, 876
Alw26I GTCTC 6 cut(s) 9, 400, 810, 935, 1218, 1439
AlwI GGATC 2 cut(s) 383, 751
Ama87I CYCGRG 1 cut(s) 130
AoxI GGCC 6 cut(s) 134, 174, 213, 226, 585, 1014
ApeKI GCWGC 4 cut(s) 124, 347, 653, 809
ApoI RAATTY 7 cut(s) 24, 284, 354, 659, 692, 712, 1087
Asp700I GAANNNNTTC 2 cut(s) 288, 1314
AspS9I GGNCC 3 cut(s) 134, 227, 1299
AsuC2I CCSGG 2 cut(s) 131, 132
AsuHPI GGTGA 2 cut(s) 881, 904
AvaI CYCGRG 1 cut(s) 130
AvaII GGWCC 1 cut(s) 1299
BalI TGGCCA 1 cut(s) 215
BanI GGYRCC 1 cut(s) 145
BanII GRGCYC 2 cut(s) 438, 876
BbsI GAAGAC 2 cut(s) 311, 1189
Bbv12I GWGCWC 2 cut(s) 438, 876
BbvI GCAGC 4 cut(s) 111, 334, 665, 796
BccI CCATC 4 cut(s) 201, 515, 831, 1327
BceAI ACGGC 1 cut(s) 248
BcgI CGANNNNNNTGC 2 cut(s) 405, 439
BciT130I CCWGG 4 cut(s) 635, 860, 917, 1347
BcnI CCSGG 2 cut(s) 131, 132
BcoDI GTCTC 6 cut(s) 9, 400, 810, 935, 1218, 1439
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 1 cut(s) 105
BfmI CTRYAG 1 cut(s) 957
BglI GCCNNNNNGGC 2 cut(s) 133, 584
BisI GCNGC 7 cut(s) 125, 177, 348, 585, 654, 810, 854
BlsI GCNGC 7 cut(s) 126, 178, 349, 586, 655, 811, 855
BmcAI AGTACT 1 cut(s) 109
Bme1390I CCNGG 6 cut(s) 131, 132, 635, 860, 917, 1347
Bme18I GGWCC 1 cut(s) 1299
BmeT110I CYCGRG 1 cut(s) 130
BmgT120I GGNCC 3 cut(s) 134, 227, 1299
BmiI GGNNCC 5 cut(s) 135, 147, 857, 1300, 1317
BmrFI CCNGG 6 cut(s) 131, 132, 635, 860, 917, 1347
BmrI ACTGGG 1 cut(s) 257
BmsI GCATC 5 cut(s) 175, 288, 476, 497, 628
BmuI ACTGGG 1 cut(s) 257
BpiI GAAGAC 2 cut(s) 311, 1189
BpmI CTGGAG 3 cut(s) 452, 617, 842
BpuMI CCSGG 2 cut(s) 131, 132
BsaBI GATNNNNATC 1 cut(s) 525
BsaI GGTCTC 1 cut(s) 1218
BsaJI CCNNGG 7 cut(s) 129, 130, 131, 137, 915, 1017, 1273
BsaXI ACNNNNNCTCC 4 cut(s) 840, 870, 1327, 1357
Bsc4I CCNNNNNNNGG 5 cut(s) 155, 247, 748, 1236, 1325
Bse1I ACTGG 2 cut(s) 252, 1415
Bse3DI GCAATG 3 cut(s) 975, 1005, 1447
Bse8I GATNNNNATC 1 cut(s) 525
BseBI CCWGG 4 cut(s) 635, 860, 917, 1347
BseDI CCNNGG 7 cut(s) 129, 130, 131, 137, 915, 1017, 1273
BseGI GGATG 4 cut(s) 18, 526, 643, 1131
BseJI GATNNNNATC 1 cut(s) 525
BseLI CCNNNNNNNGG 5 cut(s) 155, 247, 748, 1236, 1325
BseMI GCAATG 3 cut(s) 975, 1005, 1447
BseMII CTCAG 4 cut(s) 273, 553, 974, 1560
BseNI ACTGG 2 cut(s) 252, 1415
BseRI GAGGAG 1 cut(s) 1113
BseXI GCAGC 4 cut(s) 111, 334, 665, 796
Bsh1236I CGCG 1 cut(s) 453
BshFI GGCC 6 cut(s) 136, 176, 215, 228, 587, 1016
BshNI GGYRCC 1 cut(s) 145
BsiHKAI GWGCWC 2 cut(s) 438, 876
BsiHKCI CYCGRG 1 cut(s) 130
BsiSI CCGG 5 cut(s) 131, 281, 671, 813, 1262
BslFI GGGAC 2 cut(s) 264, 1312
BslI CCNNNNNNNGG 5 cut(s) 155, 247, 748, 1236, 1325
BsmAI GTCTC 6 cut(s) 9, 400, 810, 935, 1218, 1439
BsmBI CGTCTC 1 cut(s) 810
BsmFI GGGAC 2 cut(s) 264, 1312
BsmI GAATGC 1 cut(s) 1249
BsnI GGCC 6 cut(s) 136, 176, 215, 228, 587, 1016
Bso31I GGTCTC 1 cut(s) 1218
BsoBI CYCGRG 1 cut(s) 130
Bsp1286I GDGCHC 2 cut(s) 438, 876
Bsp143I GATC 5 cut(s) 375, 549, 756, 778, 883
Bsp19I CCATGG 1 cut(s) 137
BspACI CCGC 6 cut(s) 177, 584, 725, 853, 1167, 1365
BspANI GGCC 6 cut(s) 136, 176, 215, 228, 587, 1016
BspCNI CTCAG 4 cut(s) 272, 552, 975, 1559
BspFNI CGCG 1 cut(s) 453
BspLI GGNNCC 5 cut(s) 135, 147, 857, 1300, 1317
BspPI GGATC 2 cut(s) 383, 751
BspQI GCTCTTC 2 cut(s) 1285, 1455
BspT107I GGYRCC 1 cut(s) 145
BspTNI GGTCTC 1 cut(s) 1218
BsrDI GCAATG 3 cut(s) 975, 1005, 1447
BsrI ACTGG 2 cut(s) 252, 1415
BssECI CCNNGG 7 cut(s) 129, 130, 131, 137, 915, 1017, 1273
BssMI GATC 5 cut(s) 375, 549, 756, 778, 883
BssT1I CCWWGG 2 cut(s) 137, 1273
Bst2UI CCWGG 4 cut(s) 635, 860, 917, 1347
Bst4CI ACNGT 2 cut(s) 118, 1195
Bst6I CTCTTC 5 cut(s) 86, 477, 1050, 1285, 1455
BstC8I GCNNGC 6 cut(s) 99, 181, 428, 651, 723, 1147
BstDEI CTNAG 5 cut(s) 259, 440, 539, 983, 1546
BstDSI CCRYGG 1 cut(s) 137
BstF5I GGATG 4 cut(s) 18, 526, 643, 1131
BstFNI CGCG 1 cut(s) 453
BstKTI GATC 5 cut(s) 378, 552, 759, 781, 886
BstMAI GTCTC 6 cut(s) 9, 400, 810, 935, 1218, 1439
BstMBI GATC 5 cut(s) 375, 549, 756, 778, 883
BstMWI GCNNNNNNNGC 6 cut(s) 133, 307, 584, 853, 1155, 1164
BstNI CCWGG 4 cut(s) 635, 860, 917, 1347
BstNSI RCATGY 3 cut(s) 101, 430, 925
BstSCI CCNGG 6 cut(s) 129, 130, 633, 858, 915, 1345
BstSFI CTRYAG 1 cut(s) 957
BstUI CGCG 1 cut(s) 453
BstV1I GCAGC 4 cut(s) 111, 334, 665, 796
BstV2I GAAGAC 2 cut(s) 311, 1189
BstX2I RGATCY 1 cut(s) 756
BstXI CCANNNNNNTGG 1 cut(s) 866
BstYI RGATCY 1 cut(s) 756
BsuRI GGCC 6 cut(s) 136, 176, 215, 228, 587, 1016
BtgI CCRYGG 1 cut(s) 137
BtgZI GCGATG 1 cut(s) 261
BtsCI GGATG 4 cut(s) 18, 526, 643, 1131
BtsI GCAGTG 1 cut(s) 196
BtsIMutI CAGTG 2 cut(s) 196, 547
Cac8I GCNNGC 6 cut(s) 99, 181, 428, 651, 723, 1147
Cfr13I GGNCC 3 cut(s) 134, 227, 1299
Cfr9I CCCGGG 1 cut(s) 130
CseI GACGC 2 cut(s) 316, 556
Csp6I GTAC 3 cut(s) 108, 737, 1022
CspCI CAANNNNNGTGG 2 cut(s) 435, 470
CviAII CATG 7 cut(s) 98, 138, 202, 235, 311, 427, 922
CviQI GTAC 3 cut(s) 108, 737, 1022
DdeI CTNAG 5 cut(s) 259, 440, 539, 983, 1546
DpnI GATC 5 cut(s) 377, 551, 758, 780, 885
DpnII GATC 5 cut(s) 375, 549, 756, 778, 883
EaeI YGGCCR 2 cut(s) 174, 213
Eam1104I CTCTTC 5 cut(s) 86, 477, 1050, 1285, 1455
EarI CTCTTC 5 cut(s) 86, 477, 1050, 1285, 1455
Ecl136II GAGCTC 2 cut(s) 436, 874
Eco130I CCWWGG 2 cut(s) 137, 1273
Eco24I GRGCYC 2 cut(s) 438, 876
Eco31I GGTCTC 1 cut(s) 1218
Eco47I GGWCC 1 cut(s) 1299
Eco53kI GAGCTC 2 cut(s) 436, 874
Eco57I CTGAAG 3 cut(s) 323, 930, 1206
Eco88I CYCGRG 1 cut(s) 130
EcoICRI GAGCTC 2 cut(s) 436, 874
EcoRII CCWGG 4 cut(s) 633, 858, 915, 1345
EcoT14I CCWWGG 2 cut(s) 137, 1273
EcoT38I GRGCYC 2 cut(s) 438, 876
ErhI CCWWGG 2 cut(s) 137, 1273
Esp3I CGTCTC 1 cut(s) 810
FaeI CATG 7 cut(s) 101, 141, 205, 238, 314, 430, 925
FalI AAGNNNNNCTT 4 cut(s) 928, 960, 1496, 1528
FaqI GGGAC 2 cut(s) 264, 1312
FatI CATG 7 cut(s) 97, 137, 201, 234, 310, 426, 921
FauI CCCGC 1 cut(s) 1160
Fnu4HI GCNGC 7 cut(s) 125, 177, 348, 585, 654, 810, 854
FokI GGATG 4 cut(s) 5, 513, 650, 1118
FriOI GRGCYC 2 cut(s) 438, 876
Fsp4HI GCNGC 7 cut(s) 125, 177, 348, 585, 654, 810, 854
FspBI CTAG 1 cut(s) 105
GluI GCNGC 7 cut(s) 125, 177, 348, 585, 654, 810, 854
GsuI CTGGAG 3 cut(s) 452, 617, 842
HaeIII GGCC 6 cut(s) 136, 176, 215, 228, 587, 1016
HapII CCGG 5 cut(s) 131, 281, 671, 813, 1262
HgaI GACGC 2 cut(s) 316, 556
Hin1II CATG 7 cut(s) 101, 141, 205, 238, 314, 430, 925
HinfI GANTC 6 cut(s) 458, 503, 803, 863, 1058, 1269
HpaII CCGG 5 cut(s) 131, 281, 671, 813, 1262
HphI GGTGA 2 cut(s) 881, 904
Hpy166II GTNNAC 1 cut(s) 739
Hpy188I TCNGA 6 cut(s) 158, 520, 984, 1037, 1063, 1549
Hpy188III TCNNGA 2 cut(s) 293, 827
Hpy8I GTNNAC 1 cut(s) 739
HpyAV CCTTC 3 cut(s) 136, 693, 1138
HpyCH4III ACNGT 2 cut(s) 118, 1195
HpyCH4IV ACGT 1 cut(s) 338
HpyF10VI GCNNNNNNNGC 6 cut(s) 133, 307, 584, 853, 1155, 1164
HpyF3I CTNAG 5 cut(s) 259, 440, 539, 983, 1546
HpySE526I ACGT 1 cut(s) 338
Hsp92II CATG 7 cut(s) 101, 141, 205, 238, 314, 430, 925
Kzo9I GATC 5 cut(s) 375, 549, 756, 778, 883
LguI GCTCTTC 2 cut(s) 1285, 1455
LmnI GCTCC 5 cut(s) 433, 441, 636, 861, 879
Lsp1109I GCAGC 4 cut(s) 111, 334, 665, 796
LweI GCATC 5 cut(s) 175, 288, 476, 497, 628
MaeI CTAG 1 cut(s) 105
MaeII ACGT 1 cut(s) 338
MaeIII GTNAC 2 cut(s) 67, 910
MalI GATC 5 cut(s) 377, 551, 758, 780, 885
MboI GATC 5 cut(s) 375, 549, 756, 778, 883
MflI RGATCY 1 cut(s) 756
MhlI GDGCHC 2 cut(s) 438, 876
MlsI TGGCCA 1 cut(s) 215
MluI ACGCGT 1 cut(s) 451
MluNI TGGCCA 1 cut(s) 215
MlyI GAGTC 3 cut(s) 467, 872, 1067
MmeI TCCRAC 1 cut(s) 1015
Mox20I TGGCCA 1 cut(s) 215
MroXI GAANNNNTTC 2 cut(s) 288, 1314
MscI TGGCCA 1 cut(s) 215
MseI TTAA 2 cut(s) 1068, 1085
Msp20I TGGCCA 1 cut(s) 215
MspA1I CMGCKG 1 cut(s) 809
MspI CCGG 5 cut(s) 131, 281, 671, 813, 1262
MspR9I CCNGG 6 cut(s) 131, 132, 635, 860, 917, 1347
Mva1269I GAATGC 1 cut(s) 1249
MvaI CCWGG 4 cut(s) 635, 860, 917, 1347
MvnI CGCG 1 cut(s) 453
MwoI GCNNNNNNNGC 6 cut(s) 133, 307, 584, 853, 1155, 1164
NciI CCSGG 2 cut(s) 131, 132
NcoI CCATGG 1 cut(s) 137
NdeII GATC 5 cut(s) 375, 549, 756, 778, 883
NlaIII CATG 7 cut(s) 101, 141, 205, 238, 314, 430, 925
NlaIV GGNNCC 5 cut(s) 135, 147, 857, 1300, 1317
NmeAIII GCCGAG 1 cut(s) 1042
NmuCI GTSAC 1 cut(s) 910
NspI RCATGY 3 cut(s) 101, 430, 925
PaeI GCATGC 2 cut(s) 101, 430
PciI ACATGT 1 cut(s) 921
PciSI GCTCTTC 2 cut(s) 1285, 1455
PctI GAATGC 1 cut(s) 1249
PdmI GAANNNNTTC 2 cut(s) 288, 1314
PfeI GAWTC 3 cut(s) 503, 803, 1269
PflMI CCANNNNNTGG 2 cut(s) 748, 1236
PfoI TCCNGGA 2 cut(s) 633, 858
PkrI GCNGC 7 cut(s) 126, 178, 349, 586, 655, 811, 855
PleI GAGTC 3 cut(s) 466, 871, 1066
PpsI GAGTC 3 cut(s) 466, 871, 1066
PscI ACATGT 1 cut(s) 921
PsiI TTATAA 1 cut(s) 393
Psp124BI GAGCTC 2 cut(s) 438, 876
Psp1406I AACGTT 1 cut(s) 338
Psp6I CCWGG 4 cut(s) 633, 858, 915, 1345
PspGI CCWGG 4 cut(s) 633, 858, 915, 1345
PspN4I GGNNCC 5 cut(s) 135, 147, 857, 1300, 1317
PspPI GGNCC 3 cut(s) 134, 227, 1299
PsuI RGATCY 1 cut(s) 756
PvuII CAGCTG 1 cut(s) 809
RsaI GTAC 3 cut(s) 109, 738, 1023
RsaNI GTAC 3 cut(s) 108, 737, 1022
SacI GAGCTC 2 cut(s) 438, 876
SapI GCTCTTC 2 cut(s) 1285, 1455
SaqAI TTAA 2 cut(s) 1068, 1085
SatI GCNGC 7 cut(s) 125, 177, 348, 585, 654, 810, 854
Sau3AI GATC 5 cut(s) 375, 549, 756, 778, 883
Sau96I GGNCC 3 cut(s) 134, 227, 1299
ScaI AGTACT 1 cut(s) 109
SchI GAGTC 3 cut(s) 467, 872, 1067
ScrFI CCNGG 6 cut(s) 131, 132, 635, 860, 917, 1347
SduI GDGCHC 2 cut(s) 438, 876
SfaNI GCATC 5 cut(s) 175, 288, 476, 497, 628
SfcI CTRYAG 1 cut(s) 957
SinI GGWCC 1 cut(s) 1299
SmaI CCCGGG 1 cut(s) 132
SpeI ACTAGT 1 cut(s) 104
SphI GCATGC 2 cut(s) 101, 430
SsiI CCGC 6 cut(s) 177, 584, 725, 853, 1167, 1365
SspI AATATT 1 cut(s) 45
SspMI CTAG 1 cut(s) 105
SstI GAGCTC 2 cut(s) 438, 876
StyD4I CCNGG 6 cut(s) 129, 130, 633, 858, 915, 1345
StyI CCWWGG 2 cut(s) 137, 1273
TaaI ACNGT 2 cut(s) 118, 1195
TaiI ACGT 1 cut(s) 341
TaqI TCGA 3 cut(s) 15, 1077, 1294
TatI WGTACW 2 cut(s) 107, 736
TauI GCSGC 3 cut(s) 179, 587, 856
TfiI GAWTC 3 cut(s) 503, 803, 1269
Tru1I TTAA 2 cut(s) 1068, 1085
Tru9I TTAA 2 cut(s) 1068, 1085
TscAI CASTG 2 cut(s) 203, 547
TseFI GTSAC 1 cut(s) 910
TseI GCWGC 4 cut(s) 124, 347, 653, 809
Tsp45I GTSAC 1 cut(s) 910
TspDTI ATGAA 6 cut(s) 264, 780, 1016, 1120, 1189, 1525
TspGWI ACGGA 2 cut(s) 519, 689
TspMI CCCGGG 1 cut(s) 130
TspRI CASTG 2 cut(s) 203, 547
Van91I CCANNNNNTGG 2 cut(s) 748, 1236
VpaK11BI GGWCC 1 cut(s) 1299
XapI RAATTY 7 cut(s) 24, 284, 354, 659, 692, 712, 1087
XceI RCATGY 3 cut(s) 101, 430, 925
XcmI CCANNNNNNNNNTGG 1 cut(s) 1309
XmaI CCCGGG 1 cut(s) 130
XmnI GAANNNNTTC 2 cut(s) 288, 1314
XspI CTAG 1 cut(s) 105
ZrmI AGTACT 1 cut(s) 109
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.