RchiOBHm_Chr3g0447771

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
Physical Location & Seq
Reverse (-)
343194 .. 343568
375 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41523

Sequence Viewer

Length: 375 bp
ATGAAGTTGGTAATAAAAGAAACACTACGATTGCACCCTCCTGTTGCCTTAATACCAAGACAGGCAAACAAAAGATGCAAAGTCAGTGGATATGATGTACCATCTGGAGCCAGGGTGTTGGTAAATGCTTGGGCAATAGGAAGAGACCCGAGACATTGGGGCACCAGTGCTGATTGCTTTGAGCCTGAGAGGTTTCAAGGTTCTTCCATTGATTTTAAAGGGTCCGACTTTGAATTCATTCCATTTGGGGCTGGTAAGAGAATGTGTCCAGGCATCTTATTTGGAACTGCTGCTATTGAGATTGCACTTTCTCAGTTGCTCTACTACTTCAACTGGAACTCCCAAATGGGAAAAACCCACCAGAGCTTAACATGA
Functional Annotation

Protein Analysis

124

Amino Acids

13.86

Weight (kDa)

9.37

Isoelectric Point (pI)

36.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 2 - 118 6.2e-36 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 161
AcsI RAATTY 1 cut(s) 233
AfaI GTAC 1 cut(s) 99
AgsI TTSAA 3 cut(s) 197, 233, 331
AjnI CCWGG 2 cut(s) 110, 268
AluBI AGCT 1 cut(s) 366
AluI AGCT 1 cut(s) 366
Alw26I GTCTC 2 cut(s) 138, 145
Ama87I CYCGRG 1 cut(s) 148
ApeKI GCWGC 1 cut(s) 290
ApoI RAATTY 1 cut(s) 233
Asp700I GAANNNNTTC 1 cut(s) 237
AspS9I GGNCC 1 cut(s) 222
AvaI CYCGRG 1 cut(s) 148
AvaII GGWCC 1 cut(s) 222
BaeGI GKGCMC 1 cut(s) 164
BanI GGYRCC 1 cut(s) 161
BbvI GCAGC 1 cut(s) 277
BccI CCATC 1 cut(s) 109
BciT130I CCWGG 2 cut(s) 112, 270
BcoDI GTCTC 2 cut(s) 138, 145
BisI GCNGC 1 cut(s) 291
BlsI GCNGC 1 cut(s) 292
Bme1390I CCNGG 2 cut(s) 112, 270
Bme18I GGWCC 1 cut(s) 222
BmeT110I CYCGRG 1 cut(s) 148
BmgT120I GGNCC 1 cut(s) 222
BmiI GGNNCC 3 cut(s) 109, 163, 223
BmrFI CCNGG 2 cut(s) 112, 270
BmsI GCATC 2 cut(s) 65, 282
BpmI CTGGAG 1 cut(s) 126
BsaI GGTCTC 1 cut(s) 138
BsaJI CCNNGG 1 cut(s) 111
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 323, 353
Bse1I ACTGG 2 cut(s) 165, 338
BseBI CCWGG 2 cut(s) 112, 270
BseDI CCNNGG 1 cut(s) 111
BseMII CTCAG 2 cut(s) 177, 326
BseNI ACTGG 2 cut(s) 165, 338
BseSI GKGCMC 1 cut(s) 164
BseXI GCAGC 1 cut(s) 277
BshNI GGYRCC 1 cut(s) 161
BsiHKCI CYCGRG 1 cut(s) 148
BsmAI GTCTC 2 cut(s) 138, 145
Bso31I GGTCTC 1 cut(s) 138
BsoBI CYCGRG 1 cut(s) 148
Bsp1286I GDGCHC 1 cut(s) 164
BspCNI CTCAG 2 cut(s) 178, 325
BspLI GGNNCC 3 cut(s) 109, 163, 223
BspT107I GGYRCC 1 cut(s) 161
BspTNI GGTCTC 1 cut(s) 138
BsrI ACTGG 2 cut(s) 165, 338
BssECI CCNNGG 1 cut(s) 111
Bst2UI CCWGG 2 cut(s) 112, 270
Bst6I CTCTTC 1 cut(s) 136
BstDEI CTNAG 2 cut(s) 186, 312
BstMAI GTCTC 2 cut(s) 138, 145
BstNI CCWGG 2 cut(s) 112, 270
BstSCI CCNGG 2 cut(s) 110, 268
BstSLI GKGCMC 1 cut(s) 164
BstV1I GCAGC 1 cut(s) 277
BstXI CCANNNNNNTGG 1 cut(s) 118
BtsIMutI CAGTG 2 cut(s) 91, 172
Cfr13I GGNCC 1 cut(s) 222
Csp6I GTAC 1 cut(s) 98
CspCI CAANNNNNGTGG 2 cut(s) 67, 102
CviAII CATG 1 cut(s) 372
CviJI RGCY 4 cut(s) 110, 184, 251, 366
CviKI_1 RGCY 4 cut(s) 110, 184, 251, 366
CviQI GTAC 1 cut(s) 98
DdeI CTNAG 2 cut(s) 186, 312
DraI TTTAAA 1 cut(s) 217
Eam1104I CTCTTC 1 cut(s) 136
EarI CTCTTC 1 cut(s) 136
Eco31I GGTCTC 1 cut(s) 138
Eco47I GGWCC 1 cut(s) 222
Eco88I CYCGRG 1 cut(s) 148
EcoRI GAATTC 1 cut(s) 233
EcoRII CCWGG 2 cut(s) 110, 268
FaeI CATG 1 cut(s) 375
FaiI YATR 2 cut(s) 93, 373
FatI CATG 1 cut(s) 371
Fnu4HI GCNGC 1 cut(s) 291
Fsp4HI GCNGC 1 cut(s) 291
GluI GCNGC 1 cut(s) 291
GsuI CTGGAG 1 cut(s) 126
Hin1II CATG 1 cut(s) 375
Hpy188I TCNGA 1 cut(s) 226
Hpy188III TCNNGA 1 cut(s) 105
HpyCH4V TGCA 3 cut(s) 34, 78, 305
HpyF3I CTNAG 2 cut(s) 186, 312
Hsp92II CATG 1 cut(s) 375
LmnI GCTCC 1 cut(s) 107
Lsp1109I GCAGC 1 cut(s) 277
LweI GCATC 2 cut(s) 65, 282
MboII GAAGA 2 cut(s) 153, 195
MhlI GDGCHC 1 cut(s) 164
MluCI AATT 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 249
MnlI CCTC 2 cut(s) 48, 183
MroXI GAANNNNTTC 1 cut(s) 237
MseI TTAA 3 cut(s) 50, 216, 368
MspR9I CCNGG 2 cut(s) 112, 270
MvaI CCWGG 2 cut(s) 112, 270
NlaIII CATG 1 cut(s) 375
NlaIV GGNNCC 3 cut(s) 109, 163, 223
PdmI GAANNNNTTC 1 cut(s) 237
PkrI GCNGC 1 cut(s) 292
Psp6I CCWGG 2 cut(s) 110, 268
PspGI CCWGG 2 cut(s) 110, 268
PspN4I GGNNCC 3 cut(s) 109, 163, 223
PspPI GGNCC 1 cut(s) 222
RsaI GTAC 1 cut(s) 99
RsaNI GTAC 1 cut(s) 98
SaqAI TTAA 3 cut(s) 50, 216, 368
SatI GCNGC 1 cut(s) 291
Sau96I GGNCC 1 cut(s) 222
ScrFI CCNGG 2 cut(s) 112, 270
SduI GDGCHC 1 cut(s) 164
SetI ASST 3 cut(s) 194, 202, 368
SfaNI GCATC 2 cut(s) 65, 282
SinI GGWCC 1 cut(s) 222
Sse9I AATT 1 cut(s) 233
StyD4I CCNGG 2 cut(s) 110, 268
TasI AATT 1 cut(s) 233
Tru1I TTAA 3 cut(s) 50, 216, 368
Tru9I TTAA 3 cut(s) 50, 216, 368
TscAI CASTG 2 cut(s) 91, 172
TseI GCWGC 1 cut(s) 290
TspDTI ATGAA 2 cut(s) 17, 226
TspRI CASTG 2 cut(s) 91, 172
VpaK11BI GGWCC 1 cut(s) 222
XapI RAATTY 1 cut(s) 233
XmnI GAANNNNTTC 1 cut(s) 237
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.