Rh1CG138500

iron ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000132
Physical Location & Seq
Forward (+)
30297640 .. 30316995
19356 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG138500.1

Sequence Viewer

Length: 1770 bp
ATGGTTCCCCTAATGCTTCAAATTCAAAATGCTCCTTCCCTTCCTCTCTATACTTCTCTGATTGCGCTAGTTATCCTAGTTCTATATTGGAGGAGATTGAAAACCAGCCATACCTCAATACTTAATCTACCGCCAGGTCCGCGGAAACTACCGGTTATAGGAAACTTGCTTCAGTTGGTAGGCTCACTACCACATCATTCTCTAAGAGACTTGGCCAAGAAGTATGGACCAATCATGCACCTCAAAGTGGGACAAGTATCAGCCGTAGTGATTTCATCTCCACAACTAGCTGAAGAGGTGTTGAGGACACATGAGACTGCCTTCTCGCAACGCCCCACTGTTTTTGCTATTGAGGCAAATGCGCAAATTTGTGTGTCGGAGCTCCTAAGTACAAAGCGTGTGCAGTCTTTTGCATCAATAAGAGAAGAAGAGGCATGGAATCTTGTTGGATCAGTTCATTCCTCAGCATCACAGCCACAGCTAGTCAACCTCAGCGAGATGATTTTCTCCATGCAAAACGGCATCACTGCCCGGGCAGCCTTGGGGAAGAAGTGCAAACATCAACAAGAATTTACATCATTGATCGATGAAATCAACCAGCTTGCAGGAGGCTTTGCAGTGCCGGATTTGTTCCCTTCTCTCAAGTTCCTTCGTCATGTCACACGTTTCAAGCCTGCCCTTGAGAAAATACACGGAAAAATGGACAGGATGCTTGATGAAATCATCAATGATCATAAAGTGAAAAGAGAATCATCAGCTGGTGATGATCCTCTGCAAGAAGATATAGTTGATGTGCTTTTACAACTTCAGGAGTCTAGTGATCAGCTCCAGCTGGATGTCAAAACCAAGCATATCAAAGCTATCACCATGGACATGTATACTTCTGGAAGTGAAACTTCAGCAACTACCACAGAATGGGCAATGGCAGAATTAGTGAGAAATCCAAGAGTAATGGAGAAAGCACAAGCCGAGGTACGACAACTTCTCGCAGGCAAGAGGAAAATCCATGATGCAGACATTAAAAAACTAGACTACCTGAAATCGGTTGTAAAAGAAACTCTAAGGTTACACCCTCCTCTTGCCTTAATCGCAAGACAAGCCACTCAGAGATGCAAAATTAGTGGATATGATATACCATCTGAAACCAAACTCTTGGTCAATGCTTGGGCCATTGGAAGAGACCCAAAGCATTGGGGGGATAGTGCTGATTGCTTTGAGCCTGAGAGGTTCCAAGGTTCTTCCATTGATTTCAGAGGGACCAACTTTGAATTTATTCCATTTGGGGCTGGTAAGAGAATGTGTCCAGGCATATCATTCGGAACTGCATCAGTTGAGATTGCACTTGCTCAACTGTTGTACCACTTCAACTGGAAACTCCCCAATGGGACAAAATCAGAAGATCTTGACATGACTGAATCAATGGGAATGAGCGCAAGGAAGAAGAATGACTTGAAAGGGACAGTGCTCCACGCCATTGAGTATGTCAAGTCAAGAGAAGGAAATAATCCAGAAAAGGTTCGGCTGGGTCATCAATTCAATTTCAAGGAAAAGCATCAAAAGGTTAGAATTGCAACCTCCAGCTTCACTTGTTTCTCTGCACAGCTTGCCCAGGAGGATAAACCGGAGTCTGTAGTAGTGAAAGAGAAAAGCGTGTCAGTGATTCCTTTGGCTAGAGGAAAGGGAAAAAGGATGGGTGTAAGTCCTCTTCGACATTTTCATCAAGCGTATGTAAATCCATTTGAGGATGTTACAGGCGTTCAGGTCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

589

Amino Acids

65.84

Weight (kDa)

9.2

Isoelectric Point (pI)

37.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 44 - 481 5.3e-89 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1768
Acc16I TGCGCA 1 cut(s) 363
AccB7I CCANNNNNTGG 1 cut(s) 915
AccI GTMKAC 1 cut(s) 878
AccII CGCG 1 cut(s) 142
AciI CCGC 3 cut(s) 131, 140, 142
AclWI GGATC 2 cut(s) 457, 761
AcoI YGGCCR 1 cut(s) 213
AcsI RAATTY 4 cut(s) 21, 366, 569, 1268
AcuI CTGAAG 4 cut(s) 155, 312, 791, 882
AfaI GTAC 3 cut(s) 391, 975, 1358
AfiI CCNNNNNNNGG 4 cut(s) 158, 247, 915, 1042
AflIII ACRYGT 2 cut(s) 662, 873
AgeI ACCGGT 1 cut(s) 151
AgsI TTSAA 9 cut(s) 20, 26, 100, 670, 1268, 1366, 1453, 1537, 1543
AjnI CCWGG 3 cut(s) 133, 1303, 1608
Alw21I GWGCWC 2 cut(s) 384, 1467
Alw26I GTCTC 3 cut(s) 201, 308, 1173
AlwI GGATC 2 cut(s) 457, 761
Ama87I CYCGRG 1 cut(s) 531
AoxI GGCC 2 cut(s) 213, 1167
ApeKI GCWGC 1 cut(s) 536
ApoI RAATTY 4 cut(s) 21, 366, 569, 1268
ArsI GACNNNNNNTTYG 2 cut(s) 1140, 1172
AsiGI ACCGGT 1 cut(s) 151
Asp700I GAANNNNTTC 2 cut(s) 1272, 1515
AspLEI GCGC 3 cut(s) 67, 364, 1433
AspS9I GGNCC 4 cut(s) 137, 227, 1167, 1257
AsuC2I CCSGG 2 cut(s) 532, 533
AsuHPI GGTGA 2 cut(s) 773, 856
AvaI CYCGRG 1 cut(s) 531
AvaII GGWCC 3 cut(s) 137, 227, 1257
BaeI ACNNNNGTAYC 2 cut(s) 1340, 1373
BalI TGGCCA 1 cut(s) 215
BanII GRGCYC 1 cut(s) 384
BarI GAAGNNNNNNTAC 4 cut(s) 966, 998, 1689, 1721
Bbv12I GWGCWC 2 cut(s) 384, 1467
BbvCI CCTCAGC 2 cut(s) 463, 491
BbvI GCAGC 1 cut(s) 548
BccI CCATC 2 cut(s) 1144, 1684
BceAI ACGGC 2 cut(s) 248, 535
BcgI CGANNNNNNTGC 2 cut(s) 1297, 1331
BciT130I CCWGG 3 cut(s) 135, 1305, 1610
BclI TGATCA 2 cut(s) 730, 820
BcnI CCSGG 2 cut(s) 532, 533
BcoDI GTCTC 3 cut(s) 201, 308, 1173
BfaI CTAG 7 cut(s) 68, 77, 287, 482, 816, 1028, 1671
BfmI CTRYAG 1 cut(s) 1629
BglII AGATCT 1 cut(s) 1399
BisI GCNGC 1 cut(s) 537
BlsI GCNGC 1 cut(s) 538
Bme1390I CCNGG 5 cut(s) 135, 532, 533, 1305, 1610
Bme18I GGWCC 3 cut(s) 137, 227, 1257
BmeT110I CYCGRG 1 cut(s) 531
BmgT120I GGNCC 4 cut(s) 137, 227, 1167, 1257
BmiI GGNNCC 3 cut(s) 6, 1229, 1258
BmrFI CCNGG 5 cut(s) 135, 532, 533, 1305, 1610
BmsI GCATC 8 cut(s) 422, 476, 531, 699, 1000, 1100, 1334, 1561
BpmI CTGGAG 2 cut(s) 812, 1561
Bpu10I CCTNAGC 2 cut(s) 463, 491
BpuEI CTTGAG 2 cut(s) 626, 701
BpuMI CCSGG 2 cut(s) 532, 533
Bsa29I ATCGAT 1 cut(s) 585
BsaI GGTCTC 1 cut(s) 1173
BsaJI CCNNGG 7 cut(s) 140, 531, 540, 867, 969, 1231, 1608
BsaWI WCCGGW 2 cut(s) 151, 1621
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 247, 915, 1042
Bse118I RCCGGY 1 cut(s) 151
Bse1I ACTGG 1 cut(s) 1373
Bse3DI GCAATG 1 cut(s) 927
BseBI CCWGG 3 cut(s) 135, 1305, 1610
BseCI ATCGAT 1 cut(s) 585
BseDI CCNNGG 7 cut(s) 140, 531, 540, 867, 969, 1231, 1608
BseGI GGATG 4 cut(s) 714, 841, 1695, 1750
BseLI CCNNNNNNNGG 4 cut(s) 158, 247, 915, 1042
BseMI GCAATG 1 cut(s) 927
BseMII CTCAG 4 cut(s) 477, 505, 1118, 1212
BseNI ACTGG 1 cut(s) 1373
BseRI GAGGAG 2 cut(s) 106, 1065
BseXI GCAGC 1 cut(s) 548
BseYI CCCAGC 1 cut(s) 1522
BsgI GTGCAG 2 cut(s) 422, 1581
Bsh1236I CGCG 1 cut(s) 142
BshFI GGCC 2 cut(s) 215, 1169
BshTI ACCGGT 1 cut(s) 151
BshVI ATCGAT 1 cut(s) 585
BsiHKAI GWGCWC 2 cut(s) 384, 1467
BsiHKCI CYCGRG 1 cut(s) 531
BsiSI CCGG 4 cut(s) 152, 532, 623, 1622
BslFI GGGAC 4 cut(s) 264, 1270, 1399, 1471
BslI CCNNNNNNNGG 4 cut(s) 158, 247, 915, 1042
BsmAI GTCTC 3 cut(s) 201, 308, 1173
BsmFI GGGAC 4 cut(s) 264, 1270, 1399, 1471
BsnI GGCC 2 cut(s) 215, 1169
Bso31I GGTCTC 1 cut(s) 1173
BsoBI CYCGRG 1 cut(s) 531
Bsp1286I GDGCHC 2 cut(s) 384, 1467
Bsp143I GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
Bsp19I CCATGG 1 cut(s) 867
BspACI CCGC 3 cut(s) 131, 140, 142
BspANI GGCC 2 cut(s) 215, 1169
BspCNI CTCAG 4 cut(s) 476, 504, 1117, 1213
BspDI ATCGAT 1 cut(s) 585
BspFNI CGCG 1 cut(s) 142
BspLI GGNNCC 3 cut(s) 6, 1229, 1258
BspPI GGATC 2 cut(s) 457, 761
BspTNI GGTCTC 1 cut(s) 1173
BsrDI GCAATG 1 cut(s) 927
BsrFI RCCGGY 1 cut(s) 151
BsrI ACTGG 1 cut(s) 1373
BssAI RCCGGY 1 cut(s) 151
BssECI CCNNGG 7 cut(s) 140, 531, 540, 867, 969, 1231, 1608
BssMI GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
BssNAI GTATAC 1 cut(s) 879
BssT1I CCWWGG 3 cut(s) 540, 867, 1231
Bst1107I GTATAC 1 cut(s) 879
Bst2UI CCWGG 3 cut(s) 135, 1305, 1610
Bst4CI ACNGT 3 cut(s) 340, 1353, 1462
Bst6I CTCTTC 4 cut(s) 288, 423, 1171, 1710
BstAPI GCANNNNNTGC 1 cut(s) 1604
BstC8I GCNNGC 4 cut(s) 603, 675, 991, 1605
BstDEI CTNAG 7 cut(s) 203, 386, 463, 491, 1061, 1104, 1221
BstDSI CCRYGG 2 cut(s) 140, 867
BstF5I GGATG 4 cut(s) 714, 841, 1695, 1750
BstFNI CGCG 1 cut(s) 142
BstHHI GCGC 3 cut(s) 67, 364, 1433
BstKTI GATC 6 cut(s) 452, 585, 733, 769, 823, 1402
BstMAI GTCTC 3 cut(s) 201, 308, 1173
BstMBI GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
BstMWI GCNNNNNNNGC 6 cut(s) 139, 353, 536, 1088, 1097, 1604
BstNI CCWGG 3 cut(s) 135, 1305, 1610
BstNSI RCATGY 1 cut(s) 877
BstSCI CCNGG 5 cut(s) 133, 530, 531, 1303, 1608
BstSFI CTRYAG 1 cut(s) 1629
BstUI CGCG 1 cut(s) 142
BstV1I GCAGC 1 cut(s) 548
BstX2I RGATCY 1 cut(s) 1399
BstXI CCANNNNNNTGG 2 cut(s) 1153, 1191
BstYI RGATCY 1 cut(s) 1399
BstZ17I GTATAC 1 cut(s) 879
Bsu15I ATCGAT 1 cut(s) 585
BsuRI GGCC 2 cut(s) 215, 1169
BsuTUI ATCGAT 1 cut(s) 585
BtgI CCRYGG 2 cut(s) 140, 867
BtsCI GGATG 4 cut(s) 714, 841, 1695, 1750
BtsI GCAGTG 2 cut(s) 525, 624
BtsIMutI CAGTG 5 cut(s) 336, 525, 624, 1467, 1662
Cac8I GCNNGC 4 cut(s) 603, 675, 991, 1605
CfoI GCGC 3 cut(s) 67, 364, 1433
Cfr10I RCCGGY 1 cut(s) 151
Cfr13I GGNCC 4 cut(s) 137, 227, 1167, 1257
Cfr42I CCGCGG 1 cut(s) 143
Cfr9I CCCGGG 1 cut(s) 531
ClaI ATCGAT 1 cut(s) 585
Csp6I GTAC 3 cut(s) 390, 974, 1357
CspAI ACCGGT 1 cut(s) 151
CspCI CAANNNNNGTGG 4 cut(s) 325, 360, 1102, 1137
CviAII CATG 9 cut(s) 235, 311, 435, 511, 656, 868, 874, 1007, 1408
CviQI GTAC 3 cut(s) 390, 974, 1357
DdeI CTNAG 7 cut(s) 203, 386, 463, 491, 1061, 1104, 1221
DpnI GATC 6 cut(s) 451, 584, 732, 768, 822, 1401
DpnII GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
EaeI YGGCCR 1 cut(s) 213
Eam1104I CTCTTC 4 cut(s) 288, 423, 1171, 1710
EarI CTCTTC 4 cut(s) 288, 423, 1171, 1710
Ecl136II GAGCTC 1 cut(s) 382
Eco130I CCWWGG 3 cut(s) 540, 867, 1231
Eco24I GRGCYC 1 cut(s) 384
Eco31I GGTCTC 1 cut(s) 1173
Eco47I GGWCC 3 cut(s) 137, 227, 1257
Eco53kI GAGCTC 1 cut(s) 382
Eco57I CTGAAG 4 cut(s) 155, 312, 791, 882
Eco88I CYCGRG 1 cut(s) 531
EcoICRI GAGCTC 1 cut(s) 382
EcoRII CCWGG 3 cut(s) 133, 1303, 1608
EcoT14I CCWWGG 3 cut(s) 540, 867, 1231
EcoT38I GRGCYC 1 cut(s) 384
ErhI CCWWGG 3 cut(s) 540, 867, 1231
FaeI CATG 9 cut(s) 238, 314, 438, 514, 659, 871, 877, 1010, 1411
FalI AAGNNNNNCTT 4 cut(s) 880, 912, 1433, 1465
FaqI GGGAC 4 cut(s) 264, 1270, 1399, 1471
FatI CATG 9 cut(s) 234, 310, 434, 510, 655, 867, 873, 1006, 1407
FbaI TGATCA 2 cut(s) 730, 820
FblI GTMKAC 1 cut(s) 878
Fnu4HI GCNGC 1 cut(s) 537
FokI GGATG 4 cut(s) 721, 848, 1702, 1757
FriOI GRGCYC 1 cut(s) 384
Fsp4HI GCNGC 1 cut(s) 537
FspBI CTAG 7 cut(s) 68, 77, 287, 482, 816, 1028, 1671
FspI TGCGCA 1 cut(s) 363
GlaI GCGC 3 cut(s) 66, 363, 1432
GluI GCNGC 1 cut(s) 537
GsaI CCCAGC 1 cut(s) 1526
GsuI CTGGAG 2 cut(s) 812, 1561
HaeIII GGCC 2 cut(s) 215, 1169
HapII CCGG 4 cut(s) 152, 532, 623, 1622
HhaI GCGC 3 cut(s) 67, 364, 1433
Hin1II CATG 9 cut(s) 238, 314, 438, 514, 659, 871, 877, 1010, 1411
Hin6I GCGC 3 cut(s) 65, 362, 1431
HinP1I GCGC 3 cut(s) 65, 362, 1431
HincII GTYRAC 1 cut(s) 487
HindII GTYRAC 1 cut(s) 487
HinfI GANTC 6 cut(s) 439, 749, 812, 1415, 1625, 1660
HpaII CCGG 4 cut(s) 152, 532, 623, 1622
HphI GGTGA 2 cut(s) 773, 856
Hpy166II GTNNAC 2 cut(s) 487, 879
Hpy188I TCNGA 7 cut(s) 60, 379, 1107, 1141, 1253, 1319, 1396
Hpy188III TCNNGA 5 cut(s) 809, 885, 1403, 1491, 1508
Hpy8I GTNNAC 2 cut(s) 487, 879
HpyAV CCTTC 6 cut(s) 45, 50, 331, 645, 659, 1490
HpyCH4III ACNGT 3 cut(s) 340, 1353, 1462
HpyCH4IV ACGT 1 cut(s) 664
HpyF10VI GCNNNNNNNGC 6 cut(s) 139, 353, 536, 1088, 1097, 1604
HpyF3I CTNAG 7 cut(s) 203, 386, 463, 491, 1061, 1104, 1221
HpySE526I ACGT 1 cut(s) 664
Hsp92II CATG 9 cut(s) 238, 314, 438, 514, 659, 871, 877, 1010, 1411
HspAI GCGC 3 cut(s) 65, 362, 1431
Ksp22I TGATCA 2 cut(s) 730, 820
KspI CCGCGG 1 cut(s) 143
Kzo9I GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
LmnI GCTCC 5 cut(s) 37, 379, 387, 831, 1470
Lsp1109I GCAGC 1 cut(s) 548
LweI GCATC 8 cut(s) 422, 476, 531, 699, 1000, 1100, 1334, 1561
MaeI CTAG 7 cut(s) 68, 77, 287, 482, 816, 1028, 1671
MaeII ACGT 1 cut(s) 664
MaeIII GTNAC 3 cut(s) 658, 1065, 1747
MalI GATC 6 cut(s) 451, 584, 732, 768, 822, 1401
MboI GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
MflI RGATCY 1 cut(s) 1399
MhlI GDGCHC 2 cut(s) 384, 1467
MlsI TGGCCA 1 cut(s) 215
MluCI AATT 9 cut(s) 21, 366, 569, 929, 1116, 1268, 1532, 1537, 1566
MluNI TGGCCA 1 cut(s) 215
MlyI GAGTC 2 cut(s) 821, 1634
MmeI TCCRAC 2 cut(s) 357, 427
Mox20I TGGCCA 1 cut(s) 215
MroXI GAANNNNTTC 2 cut(s) 1272, 1515
MscI TGGCCA 1 cut(s) 215
MseI TTAA 3 cut(s) 123, 1020, 1085
MslI CAYNNNNRTG 1 cut(s) 872
Msp20I TGGCCA 1 cut(s) 215
MspA1I CMGCKG 3 cut(s) 142, 758, 832
MspI CCGG 4 cut(s) 152, 532, 623, 1622
MspR9I CCNGG 5 cut(s) 135, 532, 533, 1305, 1610
MvaI CCWGG 3 cut(s) 135, 1305, 1610
MvnI CGCG 1 cut(s) 142
MwoI GCNNNNNNNGC 6 cut(s) 139, 353, 536, 1088, 1097, 1604
NciI CCSGG 2 cut(s) 532, 533
NcoI CCATGG 1 cut(s) 867
NdeII GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
NlaIII CATG 9 cut(s) 238, 314, 438, 514, 659, 871, 877, 1010, 1411
NlaIV GGNNCC 3 cut(s) 6, 1229, 1258
NmeAIII GCCGAG 1 cut(s) 994
NmuCI GTSAC 1 cut(s) 658
NsbI TGCGCA 1 cut(s) 363
NspI RCATGY 1 cut(s) 877
PciI ACATGT 1 cut(s) 873
PdmI GAANNNNTTC 2 cut(s) 1272, 1515
PfeI GAWTC 4 cut(s) 439, 749, 1415, 1660
PflMI CCANNNNNTGG 1 cut(s) 915
PinAI ACCGGT 1 cut(s) 151
PkrI GCNGC 1 cut(s) 538
PleI GAGTC 2 cut(s) 820, 1633
PpsI GAGTC 2 cut(s) 820, 1633
PscI ACATGT 1 cut(s) 873
PsiI TTATAA 1 cut(s) 1768
Psp124BI GAGCTC 1 cut(s) 384
Psp6I CCWGG 3 cut(s) 133, 1303, 1608
PspFI CCCAGC 1 cut(s) 1522
PspGI CCWGG 3 cut(s) 133, 1303, 1608
PspN4I GGNNCC 3 cut(s) 6, 1229, 1258
PspPI GGNCC 4 cut(s) 137, 227, 1167, 1257
PsuI RGATCY 1 cut(s) 1399
PvuII CAGCTG 2 cut(s) 758, 832
RsaI GTAC 3 cut(s) 391, 975, 1358
RsaNI GTAC 3 cut(s) 390, 974, 1357
RseI CAYNNNNRTG 1 cut(s) 872
SacI GAGCTC 1 cut(s) 384
SacII CCGCGG 1 cut(s) 143
SaqAI TTAA 3 cut(s) 123, 1020, 1085
SatI GCNGC 1 cut(s) 537
Sau3AI GATC 6 cut(s) 449, 582, 730, 766, 820, 1399
Sau96I GGNCC 4 cut(s) 137, 227, 1167, 1257
SchI GAGTC 2 cut(s) 821, 1634
ScrFI CCNGG 5 cut(s) 135, 532, 533, 1305, 1610
SduI GDGCHC 2 cut(s) 384, 1467
SfaNI GCATC 8 cut(s) 422, 476, 531, 699, 1000, 1100, 1334, 1561
SfcI CTRYAG 1 cut(s) 1629
Sfr303I CCGCGG 1 cut(s) 143
SgrBI CCGCGG 1 cut(s) 143
SinI GGWCC 3 cut(s) 137, 227, 1257
SmaI CCCGGG 1 cut(s) 533
SmiMI CAYNNNNRTG 1 cut(s) 872
SmlI CTYRAG 2 cut(s) 641, 680
SmoI CTYRAG 2 cut(s) 641, 680
SrfI GCCCGGGC 1 cut(s) 533
Sse9I AATT 9 cut(s) 21, 366, 569, 929, 1116, 1268, 1532, 1537, 1566
SsiI CCGC 3 cut(s) 131, 140, 142
SspMI CTAG 7 cut(s) 68, 77, 287, 482, 816, 1028, 1671
SstI GAGCTC 1 cut(s) 384
StyD4I CCNGG 5 cut(s) 133, 530, 531, 1303, 1608
StyI CCWWGG 3 cut(s) 540, 867, 1231
TaaI ACNGT 3 cut(s) 340, 1353, 1462
TaiI ACGT 1 cut(s) 667
TaqI TCGA 2 cut(s) 585, 1708
TasI AATT 9 cut(s) 21, 366, 569, 929, 1116, 1268, 1532, 1537, 1566
TatI WGTACW 1 cut(s) 389
TfiI GAWTC 4 cut(s) 439, 749, 1415, 1660
Tru1I TTAA 3 cut(s) 123, 1020, 1085
Tru9I TTAA 3 cut(s) 123, 1020, 1085
TscAI CASTG 5 cut(s) 343, 532, 624, 1467, 1662
TseFI GTSAC 1 cut(s) 658
TseI GCWGC 1 cut(s) 536
Tsp45I GTSAC 1 cut(s) 658
TspDTI ATGAA 5 cut(s) 264, 446, 603, 732, 1706
TspGWI ACGGA 1 cut(s) 708
TspMI CCCGGG 1 cut(s) 531
TspRI CASTG 5 cut(s) 343, 532, 624, 1467, 1662
Van91I CCANNNNNTGG 1 cut(s) 915
VpaK11BI GGWCC 3 cut(s) 137, 227, 1257
XapI RAATTY 4 cut(s) 21, 366, 569, 1268
XceI RCATGY 1 cut(s) 877
XmaI CCCGGG 1 cut(s) 531
XmiI GTMKAC 1 cut(s) 878
XmnI GAANNNNTTC 2 cut(s) 1272, 1515
XspI CTAG 7 cut(s) 68, 77, 287, 482, 816, 1028, 1671
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.