MD11G1202300.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000132
Physical Location & Seq
Forward (+)
29329913 .. 29331847
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1202300.v1.1.491

Sequence Viewer

Length: 1551 bp
ATGGAGCTTCAATGGCCTTCCTTCCAAGTCCTGTTTACCTTTTTTCTCTTTGTCATCACGGTACTGAAAATAGCCAATAGACGCAAAACCAAAGAGTCGGCTGTAAATCTACCTCCAGGGCCATGGAAGCTTCCCTTCATAGGAAACATTCACCAGCTCGTTGGGTCACAGCCTCATCATGGACTACGAAACTTAGCCAAGAAATATGGACCCCTTATGCATCTACAGCTTGGGGAAGTTTCCACCGTCGTTGTTTCTTCGGCAGAGTATGCCAAAGAGGTGATGAAAACCCATGATGTTGTGTTTGCATCAAGGCCCCCTATCCTTGCTACAAGGATCTTATCTTACGAGTCCACAAACATTGCCTTTGCACCATGTGGTGATTACTGGAGACAACTACGAAAAATTTGCACACTAGAGCTTTTAAGCGCTAATCGTGTGCAAGGCCACCGACCTCTTAGGGAAGAAGAGTTAGGGAATCTCATTACATGGATTGGTTCAAACGCAGGATCACCGATCAACCTCACTGAGAAAGTTTACTCATCTACGTATACCATCACGTCACGAGCAGCCTTTGGCAAAAAAAGCGAAGATCACGAAAAGTTCATAGATGCTGTGAAGCAGTCTATAGCGGTGGCAGCAGGATTTGATCTTGCAGATGTTTTTCCTTCTGTCAAACTGCTTCATCTGATAGGTGGAATTAGGCCTACACTCGAGCGGCTGCATAAAGTAACTGACAGGATAATGGAAAACATCATTAACGAACATAAAAAGAAAAGGTCAACGACAAAAAGTGGAGAAGGTGAAGCAGAGGTAGACCTGGTCGACGTTCTCTTAAAATTTCACGAGCATGGCAATGGCCTTGAGTTTTCCTTAACTACTGACAACATCAAAGCAGTAATCTTGGACATTTTCGGAGCTGGGAGTGAGACATCAGCTACCACTGTAGATTGGGCCATGTCAGAAATGATAAAAAATTCAAGAATAATGAAAATGGCACAAGATGACGTGAGAGAAGTGTATAACAGAATTGGGAAGGTAGACGAAACAGGCATTAGAGAGATGAAATATTTAAGCTTGGTGATCAAAGAGACACTCAGGCTACACCCTCCTGCTCCGCTCTTACTTCCAAGAGAATCTAGTGAGAGTTGTAAGATTAACGGATATGAAATACCTGTCAAAACCAAGGTAATTGTGAATGGATGGGCAATTGGAAGAGATCCCAATCACTGGACTGAAACAGAGAGCTTCTATCCAGAGAGATTCCTTGATAGCTCCATTGACTACAAGGGAACAAACTTCGAATATATCCCGTTTGGCGCTGGAAGGAGGATATGCCTGGGAATTTTATATGGCTTGGCCAACGTTGAGCTCCCACTTGCCCTTTTGTTGTACCATTTTGATTGGAAACTCCCTGATGGGATGACGCATGAAGACCTGGACATGACTGAGCTTTTCGGCATTACAGTTCGAAGAAAAGACGATCTGCGCTTGATCCCCATTCCTTATCATCCTCCATCTAGTAAGAAACCGCCAGTAGAACAAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

517

Amino Acids

58.28

Weight (kDa)

7.73

Isoelectric Point (pI)

41.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 38 - 488 1.4e-98 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1230
AccBSI CCGCTC 2 cut(s) 718, 1120
AccI GTMKAC 4 cut(s) 551, 816, 825, 1041
AciI CCGC 4 cut(s) 632, 718, 1118, 1532
AclI AACGTT 1 cut(s) 1365
AclWI GGATC 4 cut(s) 344, 517, 1214, 1489
AcoI YGGCCR 1 cut(s) 1359
AcsI RAATTY 4 cut(s) 405, 839, 976, 1344
AdeI CACNNNGTG 1 cut(s) 377
AfaI GTAC 2 cut(s) 63, 1394
AfeI AGCGCT 1 cut(s) 430
AfiI CCNNNNNNNGG 3 cut(s) 140, 179, 1230
AgsI TTSAA 3 cut(s) 11, 501, 981
AjiI CACGTC 2 cut(s) 561, 1009
AjnI CCWGG 4 cut(s) 115, 819, 1338, 1437
Alw21I GWGCWC 1 cut(s) 1374
Alw26I GTCTC 3 cut(s) 385, 923, 1085
AlwI GGATC 4 cut(s) 344, 517, 1214, 1489
Ama87I CYCGRG 1 cut(s) 713
Aor51HI AGCGCT 1 cut(s) 430
AoxI GGCC 8 cut(s) 14, 119, 314, 445, 704, 859, 954, 1359
ApeKI GCWGC 3 cut(s) 569, 638, 721
ApoI RAATTY 4 cut(s) 405, 839, 976, 1344
AspLEI GCGC 3 cut(s) 431, 1322, 1491
AspS9I GGNCC 4 cut(s) 119, 209, 315, 954
AsuHPI GGTGA 6 cut(s) 143, 292, 392, 504, 815, 1093
AsuII TTCGAA 2 cut(s) 1302, 1471
AvaI CYCGRG 1 cut(s) 713
AvaII GGWCC 1 cut(s) 209
BalI TGGCCA 1 cut(s) 1361
BanII GRGCYC 1 cut(s) 1374
BauI CACGAG 2 cut(s) 564, 845
BbsI GAAGAC 1 cut(s) 1440
Bbv12I GWGCWC 1 cut(s) 1374
BbvI GCAGC 3 cut(s) 581, 650, 708
BccI CCATC 4 cut(s) 563, 1197, 1412, 1525
BcgI CGANNNNNNTGC 2 cut(s) 390, 424
BciT130I CCWGG 4 cut(s) 117, 821, 1340, 1439
BclI TGATCA 1 cut(s) 1083
BcoDI GTCTC 3 cut(s) 385, 923, 1085
BfaI CTAG 3 cut(s) 416, 1140, 1521
BfmI CTRYAG 3 cut(s) 224, 627, 945
BfoI RGCGCY 2 cut(s) 432, 1323
BisI GCNGC 4 cut(s) 570, 639, 719, 722
BlsI GCNGC 4 cut(s) 571, 640, 720, 723
Bme1390I CCNGG 4 cut(s) 117, 821, 1340, 1439
Bme18I GGWCC 1 cut(s) 209
BmeT110I CYCGRG 1 cut(s) 713
BmgBI CACGTC 2 cut(s) 561, 1009
BmgT120I GGNCC 4 cut(s) 119, 209, 315, 954
BmiI GGNNCC 2 cut(s) 211, 317
BmrFI CCNGG 4 cut(s) 117, 821, 1340, 1439
BmsI GCATC 3 cut(s) 229, 317, 601
BpiI GAAGAC 1 cut(s) 1440
BpmI CTGGAG 2 cut(s) 99, 409
Bpu14I TTCGAA 2 cut(s) 1302, 1471
BpuEI CTTGAG 1 cut(s) 884
BsaAI YACGTR 1 cut(s) 549
BsaBI GATNNNNATC 1 cut(s) 1224
BsaJI CCNNGG 4 cut(s) 116, 122, 1185, 1339
Bsc4I CCNNNNNNNGG 3 cut(s) 140, 179, 1230
Bse1I ACTGG 3 cut(s) 392, 1235, 1535
Bse3DI GCAATG 2 cut(s) 360, 862
Bse8I GATNNNNATC 1 cut(s) 1224
BseBI CCWGG 4 cut(s) 117, 821, 1340, 1439
BseDI CCNNGG 4 cut(s) 116, 122, 1185, 1339
BseGI GGATG 3 cut(s) 1208, 1428, 1510
BseJI GATNNNNATC 1 cut(s) 1224
BseLI CCNNNNNNNGG 3 cut(s) 140, 179, 1230
BseMI GCAATG 2 cut(s) 360, 862
BseMII CTCAG 3 cut(s) 519, 1111, 1440
BseNI ACTGG 3 cut(s) 392, 1235, 1535
BseXI GCAGC 3 cut(s) 581, 650, 708
BseYI CCCAGC 1 cut(s) 920
BshFI GGCC 8 cut(s) 16, 121, 316, 447, 706, 861, 956, 1361
BsiHKAI GWGCWC 1 cut(s) 1374
BsiHKCI CYCGRG 1 cut(s) 713
BslI CCNNNNNNNGG 3 cut(s) 140, 179, 1230
BsmAI GTCTC 3 cut(s) 385, 923, 1085
BsnI GGCC 8 cut(s) 16, 121, 316, 447, 706, 861, 956, 1361
BsoBI CYCGRG 1 cut(s) 713
Bsp119I TTCGAA 2 cut(s) 1302, 1471
Bsp1286I GDGCHC 1 cut(s) 1374
Bsp143I GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
Bsp19I CCATGG 1 cut(s) 122
BspACI CCGC 4 cut(s) 632, 718, 1118, 1532
BspANI GGCC 8 cut(s) 16, 121, 316, 447, 706, 861, 956, 1361
BspCNI CTCAG 3 cut(s) 520, 1110, 1441
BspLI GGNNCC 2 cut(s) 211, 317
BspPI GGATC 4 cut(s) 344, 517, 1214, 1489
BspT104I TTCGAA 2 cut(s) 1302, 1471
BsrBI CCGCTC 2 cut(s) 718, 1120
BsrDI GCAATG 2 cut(s) 360, 862
BsrI ACTGG 3 cut(s) 392, 1235, 1535
BssECI CCNNGG 4 cut(s) 116, 122, 1185, 1339
BssMI GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
BssNAI GTATAC 1 cut(s) 552
BssSI CACGAG 2 cut(s) 564, 845
BssT1I CCWWGG 2 cut(s) 122, 1185
Bst1107I GTATAC 1 cut(s) 552
Bst2BI CACGAG 2 cut(s) 564, 845
Bst2UI CCWGG 4 cut(s) 117, 821, 1340, 1439
Bst4CI ACNGT 4 cut(s) 61, 247, 946, 1468
Bst6I CTCTTC 2 cut(s) 462, 1210
BstAPI GCANNNNNTGC 1 cut(s) 269
BstBAI YACGTR 1 cut(s) 549
BstBI TTCGAA 2 cut(s) 1302, 1471
BstDEI CTNAG 5 cut(s) 193, 458, 528, 1097, 1449
BstDSI CCRYGG 1 cut(s) 122
BstF5I GGATG 3 cut(s) 1208, 1428, 1510
BstH2I RGCGCY 2 cut(s) 432, 1323
BstHHI GCGC 3 cut(s) 431, 1322, 1491
BstKTI GATC 9 cut(s) 339, 512, 519, 595, 652, 1086, 1222, 1486, 1497
BstMAI GTCTC 3 cut(s) 385, 923, 1085
BstMBI GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
BstMWI GCNNNNNNNGC 6 cut(s) 13, 127, 226, 269, 585, 638
BstNI CCWGG 4 cut(s) 117, 821, 1340, 1439
BstSCI CCNGG 4 cut(s) 115, 819, 1338, 1437
BstSFI CTRYAG 3 cut(s) 224, 627, 945
BstSNI TACGTA 1 cut(s) 549
BstV1I GCAGC 3 cut(s) 581, 650, 708
BstV2I GAAGAC 1 cut(s) 1440
BstX2I RGATCY 2 cut(s) 336, 1219
BstXI CCANNNNNNTGG 2 cut(s) 123, 161
BstYI RGATCY 2 cut(s) 336, 1219
BstZ17I GTATAC 1 cut(s) 552
BsuRI GGCC 8 cut(s) 16, 121, 316, 447, 706, 861, 956, 1361
BtgI CCRYGG 1 cut(s) 122
BtrI CACGTC 2 cut(s) 561, 1009
BtsCI GGATG 3 cut(s) 1208, 1428, 1510
BtsIMutI CAGTG 3 cut(s) 525, 942, 1228
CfoI GCGC 3 cut(s) 431, 1322, 1491
Cfr13I GGNCC 4 cut(s) 119, 209, 315, 954
CseI GACGC 2 cut(s) 90, 1435
CsiI ACCWGGT 1 cut(s) 819
Csp6I GTAC 2 cut(s) 62, 1393
CspCI CAANNNNNGTGG 4 cut(s) 232, 267, 343, 378
CviAII CATG 9 cut(s) 123, 179, 293, 375, 489, 851, 958, 1430, 1444
CviQI GTAC 2 cut(s) 62, 1393
DdeI CTNAG 5 cut(s) 193, 458, 528, 1097, 1449
DpnI GATC 9 cut(s) 338, 511, 518, 594, 651, 1085, 1221, 1485, 1496
DpnII GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
DraIII CACNNNGTG 1 cut(s) 377
EaeI YGGCCR 1 cut(s) 1359
Eam1104I CTCTTC 2 cut(s) 462, 1210
EarI CTCTTC 2 cut(s) 462, 1210
Ecl136II GAGCTC 1 cut(s) 1372
Eco105I TACGTA 1 cut(s) 549
Eco130I CCWWGG 2 cut(s) 122, 1185
Eco147I AGGCCT 1 cut(s) 706
Eco24I GRGCYC 1 cut(s) 1374
Eco47I GGWCC 1 cut(s) 209
Eco47III AGCGCT 1 cut(s) 430
Eco53kI GAGCTC 1 cut(s) 1372
Eco88I CYCGRG 1 cut(s) 713
EcoICRI GAGCTC 1 cut(s) 1372
EcoO109I RGGNCCY 1 cut(s) 315
EcoRII CCWGG 4 cut(s) 115, 819, 1338, 1437
EcoT14I CCWWGG 2 cut(s) 122, 1185
EcoT22I ATGCAT 1 cut(s) 222
EcoT38I GRGCYC 1 cut(s) 1374
ErhI CCWWGG 2 cut(s) 122, 1185
FaeI CATG 9 cut(s) 126, 182, 296, 378, 492, 854, 961, 1433, 1447
FalI AAGNNNNNCTT 2 cut(s) 119, 151
FatI CATG 9 cut(s) 122, 178, 292, 374, 488, 850, 957, 1429, 1443
FbaI TGATCA 1 cut(s) 1083
FblI GTMKAC 4 cut(s) 551, 816, 825, 1041
Fnu4HI GCNGC 4 cut(s) 570, 639, 719, 722
FokI GGATG 3 cut(s) 1215, 1435, 1497
FriOI GRGCYC 1 cut(s) 1374
Fsp4HI GCNGC 4 cut(s) 570, 639, 719, 722
FspBI CTAG 3 cut(s) 416, 1140, 1521
GlaI GCGC 3 cut(s) 430, 1321, 1490
GluI GCNGC 4 cut(s) 570, 639, 719, 722
GsaI CCCAGC 1 cut(s) 924
GsuI CTGGAG 2 cut(s) 99, 409
HaeII RGCGCY 2 cut(s) 432, 1323
HaeIII GGCC 8 cut(s) 16, 121, 316, 447, 706, 861, 956, 1361
HgaI GACGC 2 cut(s) 90, 1435
HhaI GCGC 3 cut(s) 431, 1322, 1491
Hin1II CATG 9 cut(s) 126, 182, 296, 378, 492, 854, 961, 1433, 1447
Hin6I GCGC 3 cut(s) 429, 1320, 1489
HinP1I GCGC 3 cut(s) 429, 1320, 1489
HincII GTYRAC 2 cut(s) 783, 826
HindII GTYRAC 2 cut(s) 783, 826
HindIII AAGCTT 2 cut(s) 128, 1075
HinfI GANTC 5 cut(s) 95, 350, 478, 1136, 1263
HphI GGTGA 6 cut(s) 143, 292, 392, 504, 815, 1093
Hpy166II GTNNAC 8 cut(s) 36, 354, 538, 552, 783, 817, 826, 1042
Hpy188I TCNGA 3 cut(s) 690, 917, 964
Hpy188III TCNNGA 5 cut(s) 564, 596, 845, 981, 1256
Hpy8I GTNNAC 8 cut(s) 36, 354, 538, 552, 783, 817, 826, 1042
Hpy99I CGWCG 2 cut(s) 251, 830
HpyAV CCTTC 7 cut(s) 27, 31, 145, 678, 794, 1030, 1320
HpyCH4III ACNGT 4 cut(s) 61, 247, 946, 1468
HpyCH4IV ACGT 5 cut(s) 548, 560, 828, 1008, 1365
HpyCH4V TGCA 7 cut(s) 220, 308, 371, 411, 442, 656, 724
HpyF10VI GCNNNNNNNGC 6 cut(s) 13, 127, 226, 269, 585, 638
HpyF3I CTNAG 5 cut(s) 193, 458, 528, 1097, 1449
HpySE526I ACGT 5 cut(s) 548, 560, 828, 1008, 1365
Hsp92II CATG 9 cut(s) 126, 182, 296, 378, 492, 854, 961, 1433, 1447
HspAI GCGC 3 cut(s) 429, 1320, 1489
Ksp22I TGATCA 1 cut(s) 1083
Kzo9I GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
LmnI GCTCC 5 cut(s) 4, 917, 1120, 1280, 1377
Lsp1109I GCAGC 3 cut(s) 581, 650, 708
LweI GCATC 3 cut(s) 229, 317, 601
MabI ACCWGGT 1 cut(s) 819
MaeI CTAG 3 cut(s) 416, 1140, 1521
MaeII ACGT 5 cut(s) 548, 560, 828, 1008, 1365
MaeIII GTNAC 3 cut(s) 165, 561, 730
MalI GATC 9 cut(s) 338, 511, 518, 594, 651, 1085, 1221, 1485, 1496
MbiI CCGCTC 2 cut(s) 718, 1120
MboI GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
MboII GAAGA 7 cut(s) 249, 476, 479, 602, 1227, 1445, 1485
MfeI CAATTG 1 cut(s) 1209
MflI RGATCY 2 cut(s) 336, 1219
MhlI GDGCHC 1 cut(s) 1374
MlsI TGGCCA 1 cut(s) 1361
MluCI AATT 8 cut(s) 405, 699, 839, 976, 1029, 1191, 1209, 1344
MluNI TGGCCA 1 cut(s) 1361
MlyI GAGTC 2 cut(s) 104, 359
MnlI CCTC 9 cut(s) 123, 183, 271, 465, 533, 805, 1119, 1323, 1524
Mox20I TGGCCA 1 cut(s) 1361
Mph1103I ATGCAT 1 cut(s) 222
MscI TGGCCA 1 cut(s) 1361
MseI TTAA 6 cut(s) 425, 759, 836, 875, 1073, 1158
MslI CAYNNNNRTG 2 cut(s) 849, 855
Msp20I TGGCCA 1 cut(s) 1361
MspR9I CCNGG 4 cut(s) 117, 821, 1340, 1439
MunI CAATTG 1 cut(s) 1209
MvaI CCWGG 4 cut(s) 117, 821, 1340, 1439
MwoI GCNNNNNNNGC 6 cut(s) 13, 127, 226, 269, 585, 638
NcoI CCATGG 1 cut(s) 122
NdeII GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
NlaIII CATG 9 cut(s) 126, 182, 296, 378, 492, 854, 961, 1433, 1447
NlaIV GGNNCC 2 cut(s) 211, 317
NmuCI GTSAC 2 cut(s) 165, 561
NsiI ATGCAT 1 cut(s) 222
NspV TTCGAA 2 cut(s) 1302, 1471
PaeR7I CTCGAG 1 cut(s) 713
PceI AGGCCT 1 cut(s) 706
PfeI GAWTC 3 cut(s) 478, 1136, 1263
PflFI GACNNNGTC 1 cut(s) 821
PflMI CCANNNNNTGG 1 cut(s) 1230
PkrI GCNGC 4 cut(s) 571, 640, 720, 723
PleI GAGTC 2 cut(s) 103, 358
PpsI GAGTC 2 cut(s) 103, 358
Ppu21I YACGTR 1 cut(s) 549
Psp124BI GAGCTC 1 cut(s) 1374
Psp1406I AACGTT 1 cut(s) 1365
Psp6I CCWGG 4 cut(s) 115, 819, 1338, 1437
PspFI CCCAGC 1 cut(s) 920
PspGI CCWGG 4 cut(s) 115, 819, 1338, 1437
PspN4I GGNNCC 2 cut(s) 211, 317
PspPI GGNCC 4 cut(s) 119, 209, 315, 954
PspXI VCTCGAGB 1 cut(s) 713
PsuI RGATCY 2 cut(s) 336, 1219
PsyI GACNNNGTC 1 cut(s) 821
RsaI GTAC 2 cut(s) 63, 1394
RsaNI GTAC 2 cut(s) 62, 1393
RseI CAYNNNNRTG 2 cut(s) 849, 855
SacI GAGCTC 1 cut(s) 1374
SalI GTCGAC 1 cut(s) 824
SaqAI TTAA 6 cut(s) 425, 759, 836, 875, 1073, 1158
SatI GCNGC 4 cut(s) 570, 639, 719, 722
Sau3AI GATC 9 cut(s) 336, 509, 516, 592, 649, 1083, 1219, 1483, 1494
Sau96I GGNCC 4 cut(s) 119, 209, 315, 954
SchI GAGTC 2 cut(s) 104, 359
ScrFI CCNGG 4 cut(s) 117, 821, 1340, 1439
SduI GDGCHC 1 cut(s) 1374
SexAI ACCWGGT 1 cut(s) 819
SfaNI GCATC 3 cut(s) 229, 317, 601
SfcI CTRYAG 3 cut(s) 224, 627, 945
Sfr274I CTCGAG 1 cut(s) 713
SfuI TTCGAA 2 cut(s) 1302, 1471
SinI GGWCC 1 cut(s) 209
SlaI CTCGAG 1 cut(s) 713
SmiMI CAYNNNNRTG 2 cut(s) 849, 855
SmlI CTYRAG 2 cut(s) 713, 863
SmoI CTYRAG 2 cut(s) 713, 863
SnaBI TACGTA 1 cut(s) 549
Sse9I AATT 8 cut(s) 405, 699, 839, 976, 1029, 1191, 1209, 1344
SseBI AGGCCT 1 cut(s) 706
SsiI CCGC 4 cut(s) 632, 718, 1118, 1532
SspI AATATT 1 cut(s) 1070
SspMI CTAG 3 cut(s) 416, 1140, 1521
SstI GAGCTC 1 cut(s) 1374
StuI AGGCCT 1 cut(s) 706
StyD4I CCNGG 4 cut(s) 115, 819, 1338, 1437
StyI CCWWGG 2 cut(s) 122, 1185
TaaI ACNGT 4 cut(s) 61, 247, 946, 1468
TaiI ACGT 5 cut(s) 551, 563, 831, 1011, 1368
TaqI TCGA 4 cut(s) 714, 825, 1302, 1471
TasI AATT 8 cut(s) 405, 699, 839, 976, 1029, 1191, 1209, 1344
TauI GCSGC 1 cut(s) 721
TfiI GAWTC 3 cut(s) 478, 1136, 1263
Tru1I TTAA 6 cut(s) 425, 759, 836, 875, 1073, 1158
Tru9I TTAA 6 cut(s) 425, 759, 836, 875, 1073, 1158
TscAI CASTG 3 cut(s) 532, 949, 1235
TseFI GTSAC 2 cut(s) 165, 561
TseI GCWGC 3 cut(s) 569, 638, 721
Tsp45I GTSAC 2 cut(s) 165, 561
TspDTI ATGAA 8 cut(s) 127, 299, 595, 674, 1004, 1079, 1182, 1446
TspGWI ACGGA 1 cut(s) 1176
TspRI CASTG 3 cut(s) 532, 949, 1235
Tth111I GACNNNGTC 1 cut(s) 821
Van91I CCANNNNNTGG 1 cut(s) 1230
VpaK11BI GGWCC 1 cut(s) 209
XapI RAATTY 4 cut(s) 405, 839, 976, 1344
XhoI CTCGAG 1 cut(s) 713
XmiI GTMKAC 4 cut(s) 551, 816, 825, 1041
XspI CTAG 3 cut(s) 416, 1140, 1521
Zsp2I ATGCAT 1 cut(s) 222
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.