Rroxscaffold_2G00077180

Premnaspirodiene oxygenase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000132
Physical Location & Seq
Reverse (-)
807011 .. 809120
2110 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00077180.1

Sequence Viewer

Length: 1554 bp
ATGTCCCTCTTAATGCTCCAAATACCCTACTTTCCTCTCTTCACTTCTCTCTTGATCCTGGTTATTGTTTGGAAGAAATCCAAAGCCAAATCAGGCCCTAGGAAGTCTCCACCAGGGCCATGGAAGCTGCCTATTATCGGAAACTTGCATCAGTTGGCTACTGGTAATCCACTACCACATCATGCACTGAGAGACTTAGCCAAGAAAAATGGACCTATTATGCACCTAAAACTGGGTCAGGTGGAGGCCGTTATAATCTCTTCCTCCAAAGCAGCAGAAGAGGTGTTGAAGACACATGAGCTCACTTTTGCTCAGAGGCCTCTATTTTTGGCCGCAGAAGTCATGTCTTTTGGTCAAGCAAGCATTGTGTTTGCTCCTTATGGGGATTTCTGGAGAGAGGTGCGCAAGATTTGTGTTTTCGAACTCTTCAGCCCTAAACGTGTGCAGTCATTTAGATCGATAAGAGAAGAAGAGGTTTCGAATCTCATCGAGGCCATTTCCTCATCATCAAAGGGACTTACTCCCATCAATTTCAGTGACAAGAGTTTCAGTTTGACAACTGGGATAGTATCGAGGGCAGCGTTTGGGGAAAAGTGCAAAGATCAGGAGGAGTTCTGTTCATTGCTTGAAGAATCGACAAAACTTGCTGGAGGCTTTGACATACCGGATTTGTTTCCTTCACTCAAATGTCTTGGTTTCGTAAATGGGAGCATACCTTCAATGAAGAAGATGCAAAAAAAGTTTGGACAGATTCTTGAGAGTATCATCAACGATCATAAGATCAAAAGTCAAGGCAATGAGATTGACAAACCAGAGGAAGATCTTGTTGACGTACTTCTCAAACTTCAGGAGTCCAAGAAGCTCGAATTCAACTTCACAACCGATCAGATCAAAGATGTCATTATGGAGATATTCTCAGCAGGGAGTGAGACTACAGCTACCACCATAGAATGGGCAATGTCACAATTGATGAGAAATCCAACAGTAATGAGTAAGGCTCAAGCCGAGGTTCGACGAGTCTTTCAAGGAAAGCCGAAAATTGAAGAAGCAGACGTTCAAAAACTGGAATACTTGAGAGCAGTGGTAAAAGAAACACTGAGGTTACACCCTCCAGCACCATTATTCCCAAGAGAATCAAGAGAAAGATGTGAAATCGGAGGATACGAAGTCCAAGCGAAAACCAAAATGATCATCAATGAATGGGCCATTGGAAGAGACCCGGAGAGTTGGGTTGAAGCGGAGTCGTTTAAGCCAGAGAGGTTCCTCCATGGTGGTTCTGATTCCAGCATGGACTTCAAAGCGTCTGACTTCAAGTTCACTCCATTTGGGGCTGGTAGAAGATCGTGTCCGGGTATTTCTTTTGGCCTTTCCATGGTTGAACTTGCTTTTTCTCAGTTGCTCTATCACTTCGATTGGGAGCTGGGAAATGGGATCAAACCAGATGAGCTTGATATGACTGAGACTTTTGGGTTCACATGTAGGAGAAAGAATGAATTGTACTTGATTGCCAAGCCTCCATCATCGTTTTCCTTCGCCCAGTCTGAGACATCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00590 ko00591 ko01100 ko04212 ko04726 ko04750 ko04913 map00590 map00591 map01100 map04212 map04726 map04750 map04913
Pfam Domains
Protein Families
p450

Protein Analysis

517

Amino Acids

58.14

Weight (kDa)

7.59

Isoelectric Point (pI)

42.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 37 - 496 9e-96 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 254
Acc16I TGCGCA 1 cut(s) 404
AccB7I CCANNNNNTGG 1 cut(s) 951
AciI CCGC 2 cut(s) 333, 1238
AclWI GGATC 2 cut(s) 49, 1439
AcoI YGGCCR 1 cut(s) 330
AcsI RAATTY 1 cut(s) 866
AcuI CTGAAG 2 cut(s) 412, 830
AfaI GTAC 2 cut(s) 834, 1499
AfiI CCNNNNNNNGG 4 cut(s) 137, 232, 951, 1372
AflIII ACRYGT 2 cut(s) 439, 1475
AjnI CCWGG 2 cut(s) 57, 112
AjuI GAANNNNNNNTTGG 2 cut(s) 1191, 1223
AluBI AGCT 6 cut(s) 127, 301, 862, 938, 1420, 1447
AluI AGCT 6 cut(s) 127, 301, 862, 938, 1420, 1447
Alw21I GWGCWC 1 cut(s) 303
Alw26I GTCTC 6 cut(s) 111, 186, 923, 1209, 1454, 1538
AlwI GGATC 2 cut(s) 49, 1439
AoxI GGCC 8 cut(s) 94, 116, 246, 317, 330, 492, 1203, 1363
ApeKI GCWGC 3 cut(s) 127, 272, 578
ApoI RAATTY 1 cut(s) 866
AspA2I CCTAGG 1 cut(s) 98
AspLEI GCGC 1 cut(s) 405
AspS9I GGNCC 4 cut(s) 95, 116, 212, 1203
AsuC2I CCSGG 2 cut(s) 1220, 1350
AsuII TTCGAA 2 cut(s) 420, 479
AvaII GGWCC 1 cut(s) 212
AvrII CCTAGG 1 cut(s) 98
BanII GRGCYC 1 cut(s) 303
BbsI GAAGAC 1 cut(s) 296
Bbv12I GWGCWC 1 cut(s) 303
BbvI GCAGC 3 cut(s) 114, 284, 590
BccI CCATC 2 cut(s) 533, 1525
BceAI ACGGC 1 cut(s) 233
BciT130I CCWGG 2 cut(s) 59, 114
BciVI GTATCC 1 cut(s) 1154
BclI TGATCA 1 cut(s) 1188
BcnI CCSGG 2 cut(s) 1220, 1350
BcoDI GTCTC 6 cut(s) 111, 186, 923, 1209, 1454, 1538
BfaI CTAG 1 cut(s) 99
BfmI CTRYAG 1 cut(s) 933
BfuI GTATCC 1 cut(s) 1154
BglII AGATCT 1 cut(s) 820
BisI GCNGC 4 cut(s) 128, 273, 333, 579
BlnI CCTAGG 1 cut(s) 98
BlsI GCNGC 4 cut(s) 129, 274, 334, 580
Bme1390I CCNGG 4 cut(s) 59, 114, 1220, 1350
Bme18I GGWCC 1 cut(s) 212
BmgT120I GGNCC 4 cut(s) 95, 116, 212, 1203
BmiI GGNNCC 1 cut(s) 1262
BmrFI CCNGG 4 cut(s) 59, 114, 1220, 1350
BmrI ACTGGG 3 cut(s) 242, 570, 1531
BmsI GCATC 2 cut(s) 157, 720
BmuI ACTGGG 3 cut(s) 242, 570, 1531
BpiI GAAGAC 1 cut(s) 296
BplI GAGNNNNNCTC 4 cut(s) 899, 931, 982, 1014
BpmI CTGGAG 3 cut(s) 412, 669, 1095
Bpu14I TTCGAA 2 cut(s) 420, 479
BpuEI CTTGAG 3 cut(s) 776, 984, 1093
BpuMI CCSGG 2 cut(s) 1220, 1350
Bsa29I ATCGAT 1 cut(s) 458
BsaI GGTCTC 1 cut(s) 1209
BsaJI CCNNGG 6 cut(s) 98, 113, 119, 1005, 1267, 1371
BsaWI WCCGGW 1 cut(s) 664
Bsc4I CCNNNNNNNGG 4 cut(s) 137, 232, 951, 1372
Bse1I ACTGG 5 cut(s) 166, 237, 565, 1068, 1537
Bse3DI GCAATG 3 cut(s) 620, 802, 963
BseBI CCWGG 2 cut(s) 59, 114
BseCI ATCGAT 1 cut(s) 458
BseDI CCNNGG 6 cut(s) 98, 113, 119, 1005, 1267, 1371
BseGI GGATG 1 cut(s) 1547
BseLI CCNNNNNNNGG 4 cut(s) 137, 232, 951, 1372
BseMI GCAATG 3 cut(s) 620, 802, 963
BseMII CTCAG 7 cut(s) 179, 326, 930, 1088, 1406, 1449, 1533
BseNI ACTGG 5 cut(s) 166, 237, 565, 1068, 1537
BseRI GAGGAG 1 cut(s) 623
BseXI GCAGC 3 cut(s) 114, 284, 590
BseYI CCCAGC 1 cut(s) 1420
BsgI GTGCAG 1 cut(s) 464
BshFI GGCC 8 cut(s) 96, 118, 248, 319, 332, 494, 1205, 1365
BshVI ATCGAT 1 cut(s) 458
BsiHKAI GWGCWC 1 cut(s) 303
BsiSI CCGG 3 cut(s) 665, 1220, 1349
BslFI GGGAC 1 cut(s) 528
BslI CCNNNNNNNGG 4 cut(s) 137, 232, 951, 1372
BsmAI GTCTC 6 cut(s) 111, 186, 923, 1209, 1454, 1538
BsmFI GGGAC 1 cut(s) 528
BsnI GGCC 8 cut(s) 96, 118, 248, 319, 332, 494, 1205, 1365
Bso31I GGTCTC 1 cut(s) 1209
Bsp119I TTCGAA 2 cut(s) 420, 479
Bsp1286I GDGCHC 1 cut(s) 303
Bsp19I CCATGG 3 cut(s) 119, 1267, 1371
BspACI CCGC 2 cut(s) 333, 1238
BspANI GGCC 8 cut(s) 96, 118, 248, 319, 332, 494, 1205, 1365
BspCNI CTCAG 7 cut(s) 180, 325, 929, 1089, 1405, 1450, 1534
BspDI ATCGAT 1 cut(s) 458
BspLI GGNNCC 1 cut(s) 1262
BspPI GGATC 2 cut(s) 49, 1439
BspT104I TTCGAA 2 cut(s) 420, 479
BspTNI GGTCTC 1 cut(s) 1209
BsrDI GCAATG 3 cut(s) 620, 802, 963
BsrI ACTGG 5 cut(s) 166, 237, 565, 1068, 1537
BssECI CCNNGG 6 cut(s) 98, 113, 119, 1005, 1267, 1371
BssT1I CCWWGG 4 cut(s) 98, 119, 1267, 1371
Bst2UI CCWGG 2 cut(s) 59, 114
Bst4CI ACNGT 1 cut(s) 985
Bst6I CTCTTC 6 cut(s) 44, 265, 273, 431, 465, 1207
BstBI TTCGAA 2 cut(s) 420, 479
BstC8I GCNNGC 1 cut(s) 361
BstDEI CTNAG 8 cut(s) 188, 196, 312, 916, 1097, 1392, 1458, 1542
BstDSI CCRYGG 3 cut(s) 119, 1267, 1371
BstF5I GGATG 1 cut(s) 1547
BstHHI GCGC 1 cut(s) 405
BstMAI GTCTC 6 cut(s) 111, 186, 923, 1209, 1454, 1538
BstMWI GCNNNNNNNGC 1 cut(s) 124
BstNI CCWGG 2 cut(s) 59, 114
BstNSI RCATGY 1 cut(s) 1479
BstSCI CCNGG 4 cut(s) 57, 112, 1218, 1348
BstSFI CTRYAG 1 cut(s) 933
BstV1I GCAGC 3 cut(s) 114, 284, 590
BstV2I GAAGAC 1 cut(s) 296
BstX2I RGATCY 1 cut(s) 820
BstXI CCANNNNNNTGG 1 cut(s) 120
BstYI RGATCY 1 cut(s) 820
Bsu15I ATCGAT 1 cut(s) 458
BsuI GTATCC 1 cut(s) 1154
BsuRI GGCC 8 cut(s) 96, 118, 248, 319, 332, 494, 1205, 1365
BsuTUI ATCGAT 1 cut(s) 458
BtgI CCRYGG 3 cut(s) 119, 1267, 1371
BtsCI GGATG 1 cut(s) 1547
BtsI GCAGTG 1 cut(s) 1086
BtsIMutI CAGTG 4 cut(s) 185, 541, 1086, 1094
Cac8I GCNNGC 1 cut(s) 361
CfoI GCGC 1 cut(s) 405
Cfr13I GGNCC 4 cut(s) 95, 116, 212, 1203
ClaI ATCGAT 1 cut(s) 458
CseI GACGC 1 cut(s) 1290
Csp6I GTAC 2 cut(s) 833, 1498
CviAII CATG 8 cut(s) 120, 182, 296, 343, 1268, 1288, 1372, 1476
CviQI GTAC 2 cut(s) 833, 1498
DdeI CTNAG 8 cut(s) 188, 196, 312, 916, 1097, 1392, 1458, 1542
EaeI YGGCCR 1 cut(s) 330
Eam1104I CTCTTC 6 cut(s) 44, 265, 273, 431, 465, 1207
EarI CTCTTC 6 cut(s) 44, 265, 273, 431, 465, 1207
Ecl136II GAGCTC 1 cut(s) 301
Eco130I CCWWGG 4 cut(s) 98, 119, 1267, 1371
Eco147I AGGCCT 1 cut(s) 319
Eco24I GRGCYC 1 cut(s) 303
Eco31I GGTCTC 1 cut(s) 1209
Eco47I GGWCC 1 cut(s) 212
Eco53kI GAGCTC 1 cut(s) 301
Eco57I CTGAAG 2 cut(s) 412, 830
EcoICRI GAGCTC 1 cut(s) 301
EcoO109I RGGNCCY 1 cut(s) 95
EcoRI GAATTC 1 cut(s) 866
EcoRII CCWGG 2 cut(s) 57, 112
EcoT14I CCWWGG 4 cut(s) 98, 119, 1267, 1371
EcoT38I GRGCYC 1 cut(s) 303
ErhI CCWWGG 4 cut(s) 98, 119, 1267, 1371
FaeI CATG 8 cut(s) 123, 185, 299, 346, 1271, 1291, 1375, 1479
FaqI GGGAC 1 cut(s) 528
FatI CATG 8 cut(s) 119, 181, 295, 342, 1267, 1287, 1371, 1475
FbaI TGATCA 1 cut(s) 1188
Fnu4HI GCNGC 4 cut(s) 128, 273, 333, 579
FokI GGATG 1 cut(s) 1534
FriOI GRGCYC 1 cut(s) 303
Fsp4HI GCNGC 4 cut(s) 128, 273, 333, 579
FspBI CTAG 1 cut(s) 99
FspI TGCGCA 1 cut(s) 404
GlaI GCGC 1 cut(s) 404
GluI GCNGC 4 cut(s) 128, 273, 333, 579
GsaI CCCAGC 1 cut(s) 1424
GsuI CTGGAG 3 cut(s) 412, 669, 1095
HaeIII GGCC 8 cut(s) 96, 118, 248, 319, 332, 494, 1205, 1365
HapII CCGG 3 cut(s) 665, 1220, 1349
HgaI GACGC 1 cut(s) 1290
HhaI GCGC 1 cut(s) 405
Hin1II CATG 8 cut(s) 123, 185, 299, 346, 1271, 1291, 1375, 1479
Hin6I GCGC 1 cut(s) 403
HinP1I GCGC 1 cut(s) 403
HincII GTYRAC 1 cut(s) 829
HindII GTYRAC 1 cut(s) 829
HinfI GANTC 8 cut(s) 481, 632, 751, 851, 1017, 1133, 1241, 1280
HpaII CCGG 3 cut(s) 665, 1220, 1349
Hpy166II GTNNAC 3 cut(s) 829, 1317, 1473
Hpy188I TCNGA 7 cut(s) 140, 315, 888, 1157, 1279, 1306, 1543
Hpy188III TCNNGA 7 cut(s) 52, 391, 605, 755, 848, 1137, 1551
Hpy8I GTNNAC 3 cut(s) 829, 1317, 1473
Hpy99I CGWCG 1 cut(s) 1017
HpyAV CCTTC 3 cut(s) 687, 726, 1540
HpyCH4III ACNGT 1 cut(s) 985
HpyCH4IV ACGT 3 cut(s) 439, 831, 1053
HpyCH4V TGCA 6 cut(s) 148, 185, 223, 445, 597, 733
HpyF10VI GCNNNNNNNGC 1 cut(s) 124
HpyF3I CTNAG 8 cut(s) 188, 196, 312, 916, 1097, 1392, 1458, 1542
HpySE526I ACGT 3 cut(s) 439, 831, 1053
Hsp92II CATG 8 cut(s) 123, 185, 299, 346, 1271, 1291, 1375, 1479
HspAI GCGC 1 cut(s) 403
Ksp22I TGATCA 1 cut(s) 1188
LmnI GCTCC 4 cut(s) 21, 379, 708, 1417
Lsp1109I GCAGC 3 cut(s) 114, 284, 590
LweI GCATC 2 cut(s) 157, 720
MaeI CTAG 1 cut(s) 99
MaeII ACGT 3 cut(s) 439, 831, 1053
MaeIII GTNAC 3 cut(s) 536, 960, 1101
MfeI CAATTG 1 cut(s) 965
MflI RGATCY 1 cut(s) 820
MhlI GDGCHC 1 cut(s) 303
MluCI AATT 5 cut(s) 529, 866, 965, 1038, 1493
MlyI GAGTC 3 cut(s) 860, 1026, 1250
MmeI TCCRAC 1 cut(s) 1004
MseI TTAA 2 cut(s) 11, 1248
MslI CAYNNNNRTG 1 cut(s) 685
MspI CCGG 3 cut(s) 665, 1220, 1349
MspR9I CCNGG 4 cut(s) 59, 114, 1220, 1350
MunI CAATTG 1 cut(s) 965
MvaI CCWGG 2 cut(s) 59, 114
MwoI GCNNNNNNNGC 1 cut(s) 124
NciI CCSGG 2 cut(s) 1220, 1350
NcoI CCATGG 3 cut(s) 119, 1267, 1371
NlaIII CATG 8 cut(s) 123, 185, 299, 346, 1271, 1291, 1375, 1479
NlaIV GGNNCC 1 cut(s) 1262
NmeAIII GCCGAG 1 cut(s) 1030
NmuCI GTSAC 2 cut(s) 536, 960
NsbI TGCGCA 1 cut(s) 404
NspI RCATGY 1 cut(s) 1479
NspV TTCGAA 2 cut(s) 420, 479
PceI AGGCCT 1 cut(s) 319
PciI ACATGT 1 cut(s) 1475
PcsI WCGNNNNNNNCGW 2 cut(s) 578, 1161
PfeI GAWTC 5 cut(s) 481, 632, 751, 1133, 1280
PflMI CCANNNNNTGG 1 cut(s) 951
PkrI GCNGC 4 cut(s) 129, 274, 334, 580
PleI GAGTC 3 cut(s) 859, 1025, 1249
PpsI GAGTC 3 cut(s) 859, 1025, 1249
PscI ACATGT 1 cut(s) 1475
PsiI TTATAA 1 cut(s) 254
Psp124BI GAGCTC 1 cut(s) 303
Psp6I CCWGG 2 cut(s) 57, 112
PspFI CCCAGC 1 cut(s) 1420
PspGI CCWGG 2 cut(s) 57, 112
PspN4I GGNNCC 1 cut(s) 1262
PspPI GGNCC 4 cut(s) 95, 116, 212, 1203
PsuI RGATCY 1 cut(s) 820
RsaI GTAC 2 cut(s) 834, 1499
RsaNI GTAC 2 cut(s) 833, 1498
RseI CAYNNNNRTG 1 cut(s) 685
SacI GAGCTC 1 cut(s) 303
SaqAI TTAA 2 cut(s) 11, 1248
SatI GCNGC 4 cut(s) 128, 273, 333, 579
Sau96I GGNCC 4 cut(s) 95, 116, 212, 1203
SchI GAGTC 3 cut(s) 860, 1026, 1250
ScrFI CCNGG 4 cut(s) 59, 114, 1220, 1350
SduI GDGCHC 1 cut(s) 303
SfaNI GCATC 2 cut(s) 157, 720
SfcI CTRYAG 1 cut(s) 933
SfuI TTCGAA 2 cut(s) 420, 479
SinI GGWCC 1 cut(s) 212
SmiMI CAYNNNNRTG 1 cut(s) 685
SmlI CTYRAG 3 cut(s) 755, 999, 1072
SmoI CTYRAG 3 cut(s) 755, 999, 1072
Sse9I AATT 5 cut(s) 529, 866, 965, 1038, 1493
SseBI AGGCCT 1 cut(s) 319
SsiI CCGC 2 cut(s) 333, 1238
SspMI CTAG 1 cut(s) 99
SstI GAGCTC 1 cut(s) 303
StuI AGGCCT 1 cut(s) 319
StyD4I CCNGG 4 cut(s) 57, 112, 1218, 1348
StyI CCWWGG 4 cut(s) 98, 119, 1267, 1371
TaaI ACNGT 1 cut(s) 985
TaiI ACGT 3 cut(s) 442, 834, 1056
TaqI TCGA 9 cut(s) 420, 458, 479, 489, 572, 635, 864, 1012, 1410
TasI AATT 5 cut(s) 529, 866, 965, 1038, 1493
TatI WGTACW 1 cut(s) 1497
TauI GCSGC 1 cut(s) 335
TfiI GAWTC 5 cut(s) 481, 632, 751, 1133, 1280
Tru1I TTAA 2 cut(s) 11, 1248
Tru9I TTAA 2 cut(s) 11, 1248
TscAI CASTG 4 cut(s) 192, 541, 1086, 1101
TseFI GTSAC 2 cut(s) 536, 960
TseI GCWGC 3 cut(s) 127, 272, 578
Tsp45I GTSAC 2 cut(s) 536, 960
TspDTI ATGAA 4 cut(s) 609, 737, 1212, 1506
TspRI CASTG 4 cut(s) 192, 541, 1086, 1101
Van91I CCANNNNNTGG 1 cut(s) 951
VpaK11BI GGWCC 1 cut(s) 212
XapI RAATTY 1 cut(s) 866
XceI RCATGY 1 cut(s) 1479
XcmI CCANNNNNNNNNTGG 1 cut(s) 117
XmaJI CCTAGG 1 cut(s) 98
XspI CTAG 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.