RchiOBHm_Chr5g0043221

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
38168594 .. 38170979
2386 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32154

Sequence Viewer

Length: 1068 bp
ATGCTGAATCTCATCAAATGGATTGCTTCAAAAGCCAGGTCACCTATCAATCTTACAGAGAAAATTTACTCATCTACATATATGATCACTTCACGAGCAGCCTTTGGTAAAAAGAGCAAATATCATGAAGATTTTATAGATGTTGTGAAGGAAGGTACACAATTGGCAGGAGGCTTTGATCTTGCAGATGTCTTTCCTTCTTTCAGTTTGCTTCATATGATAACTGGGATGAGGCCTAAACTTGAAAGGTTGCACAAAAAATCTGACAGGATACTGGAAAACATCATCAAAGAACACAAAGATAAGGCAACATCAAAAGGTTCTGAGAGGGAAGCACAGGAAGACCTGGTAGATGTACTCTTAAAATTTCACGAGGATAATGATGGCCCTGAATTTAACCTAACTACTGACAACATCAAAGCAGTAATCTTGGACATTTTCGGAGCTGGGAGTGAGACATCCGCAACAGCTGTAGACTGGGCAATGTCAGAAATGATTAAAAATCCACAAATAATGAAAAGGGCACAGGATGAGGTGAGGGAAGTGTTCAATAGAAAAGGGCAGGTAAGTGAAACAAGCATCAAAGAGATGAAATATTTAAACTCAATTATTAAGGAGACACTCAGATTGCACCCATCTGCCCCTCTGTTAATTCCAAGAGAATGCGGAGAGAGGTGTGAGATTGGTGGATATGAAATACCTGTCAAAACAAAGGTAATTGTCAATGGATGGGCAATTGGTAGAGATCCAAAGTACTGGACTGAGCCTGAGAGCTTTCATCCAGATAGATTCCTTGATAGCTCAATTGATTTCAGGGGAACAAACTTTGAGTATATCCCATTTGGTGCTGGAAGAAGAATGTGTCCCGGCATAACATATGGTCTGGCCAATGTGGAGCTCCCACTTGCAATGTTATTATACCATTTTGATTGGAAACTCCCAAATGGAATGAAACATGAAGACCTGGACATGACTGAGGCCTTTGGCATTACAGTCCGTAGAAAAGAAGATCTGCGCCTTATACCCATCCCATATCATCCTCCACCAACTGAACAAACCCAAGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

355

Amino Acids

40.52

Weight (kDa)

6.24

Isoelectric Point (pI)

35.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 3 - 331 4e-80 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 553
AccI GTMKAC 1 cut(s) 474
AciI CCGC 2 cut(s) 462, 666
AclWI GGATC 1 cut(s) 740
AcoI YGGCCR 1 cut(s) 885
AcsI RAATTY 3 cut(s) 63, 365, 392
AfaI GTAC 3 cut(s) 157, 357, 755
AgsI TTSAA 3 cut(s) 30, 245, 550
AjnI CCWGG 3 cut(s) 35, 345, 963
AluBI AGCT 5 cut(s) 446, 470, 774, 801, 898
AluI AGCT 5 cut(s) 446, 470, 774, 801, 898
Alw21I GWGCWC 1 cut(s) 900
Alw26I GTCTC 2 cut(s) 449, 611
AlwI GGATC 1 cut(s) 740
AoxI GGCC 4 cut(s) 233, 385, 885, 978
ApeKI GCWGC 1 cut(s) 98
ApoI RAATTY 3 cut(s) 63, 365, 392
ArsI GACNNNNNNTTYG 2 cut(s) 23, 55
AspLEI GCGC 1 cut(s) 1017
AspS9I GGNCC 1 cut(s) 386
AsuC2I CCSGG 1 cut(s) 867
AsuHPI GGTGA 2 cut(s) 33, 547
BaeGI GKGCMC 1 cut(s) 526
BalI TGGCCA 1 cut(s) 887
BanII GRGCYC 1 cut(s) 900
BauI CACGAG 2 cut(s) 93, 371
BbsI GAAGAC 2 cut(s) 348, 966
Bbv12I GWGCWC 1 cut(s) 900
BbvI GCAGC 1 cut(s) 110
BccI CCATC 4 cut(s) 377, 643, 723, 1034
BciT130I CCWGG 3 cut(s) 37, 347, 965
BciVI GTATCC 1 cut(s) 264
BclI TGATCA 1 cut(s) 84
BcnI CCSGG 1 cut(s) 867
BcoDI GTCTC 2 cut(s) 449, 611
BfmI CTRYAG 1 cut(s) 471
BfuAI ACCTGC 1 cut(s) 553
BfuI GTATCC 1 cut(s) 264
BglII AGATCT 1 cut(s) 1009
BisI GCNGC 1 cut(s) 99
BlsI GCNGC 1 cut(s) 100
BmcAI AGTACT 1 cut(s) 755
Bme1390I CCNGG 4 cut(s) 37, 347, 867, 965
BmgT120I GGNCC 1 cut(s) 386
BmrFI CCNGG 4 cut(s) 37, 347, 867, 965
BmrI ACTGGG 2 cut(s) 234, 487
BmsI GCATC 1 cut(s) 588
BmuI ACTGGG 2 cut(s) 234, 487
BpiI GAAGAC 2 cut(s) 348, 966
BpuMI CCSGG 1 cut(s) 867
Bse1I ACTGG 4 cut(s) 229, 279, 482, 761
Bse3DI GCAATG 2 cut(s) 489, 915
BseBI CCWGG 3 cut(s) 37, 347, 965
BseGI GGATG 7 cut(s) 234, 458, 535, 734, 778, 1026, 1036
BseMI GCAATG 2 cut(s) 489, 915
BseMII CTCAG 5 cut(s) 315, 637, 753, 759, 966
BseNI ACTGG 4 cut(s) 229, 279, 482, 761
BseSI GKGCMC 1 cut(s) 526
BseXI GCAGC 1 cut(s) 110
BseYI CCCAGC 1 cut(s) 446
BshFI GGCC 4 cut(s) 235, 387, 887, 980
BsiHKAI GWGCWC 1 cut(s) 900
BsiSI CCGG 1 cut(s) 867
BslFI GGGAC 1 cut(s) 849
BsmAI GTCTC 2 cut(s) 449, 611
BsmFI GGGAC 1 cut(s) 849
BsmI GAATGC 1 cut(s) 668
BsnI GGCC 4 cut(s) 235, 387, 887, 980
Bsp1286I GDGCHC 2 cut(s) 526, 900
Bsp143I GATC 4 cut(s) 84, 178, 745, 1009
BspACI CCGC 2 cut(s) 462, 666
BspANI GGCC 4 cut(s) 235, 387, 887, 980
BspCNI CTCAG 5 cut(s) 316, 636, 754, 760, 967
BspHI TCATGA 1 cut(s) 124
BspMI ACCTGC 1 cut(s) 553
BspPI GGATC 1 cut(s) 740
BsrDI GCAATG 2 cut(s) 489, 915
BsrI ACTGG 4 cut(s) 229, 279, 482, 761
BssMI GATC 4 cut(s) 84, 178, 745, 1009
BssSI CACGAG 2 cut(s) 93, 371
Bst2BI CACGAG 2 cut(s) 93, 371
Bst2UI CCWGG 3 cut(s) 37, 347, 965
Bst4CI ACNGT 1 cut(s) 994
BstDEI CTNAG 5 cut(s) 324, 623, 762, 768, 975
BstEII GGTNACC 1 cut(s) 39
BstF5I GGATG 7 cut(s) 234, 458, 535, 734, 778, 1026, 1036
BstHHI GCGC 1 cut(s) 1017
BstKTI GATC 4 cut(s) 87, 181, 748, 1012
BstMAI GTCTC 2 cut(s) 449, 611
BstMBI GATC 4 cut(s) 84, 178, 745, 1009
BstMWI GCNNNNNNNGC 1 cut(s) 32
BstNI CCWGG 3 cut(s) 37, 347, 965
BstPI GGTNACC 1 cut(s) 39
BstSCI CCNGG 4 cut(s) 35, 345, 865, 963
BstSFI CTRYAG 1 cut(s) 471
BstSLI GKGCMC 1 cut(s) 526
BstV1I GCAGC 1 cut(s) 110
BstV2I GAAGAC 2 cut(s) 348, 966
BstX2I RGATCY 2 cut(s) 745, 1009
BstXI CCANNNNNNTGG 1 cut(s) 756
BstYI RGATCY 2 cut(s) 745, 1009
BsuI GTATCC 1 cut(s) 264
BsuRI GGCC 4 cut(s) 235, 387, 887, 980
BtsCI GGATG 7 cut(s) 234, 458, 535, 734, 778, 1026, 1036
BveI ACCTGC 1 cut(s) 553
CciI TCATGA 1 cut(s) 124
CfoI GCGC 1 cut(s) 1017
Cfr13I GGNCC 1 cut(s) 386
CsiI ACCWGGT 1 cut(s) 345
Csp6I GTAC 3 cut(s) 156, 356, 754
CviAII CATG 3 cut(s) 125, 956, 970
CviQI GTAC 3 cut(s) 156, 356, 754
DdeI CTNAG 5 cut(s) 324, 623, 762, 768, 975
DpnI GATC 4 cut(s) 86, 180, 747, 1011
DpnII GATC 4 cut(s) 84, 178, 745, 1009
DraI TTTAAA 1 cut(s) 600
EaeI YGGCCR 1 cut(s) 885
Ecl136II GAGCTC 1 cut(s) 898
Eco147I AGGCCT 2 cut(s) 235, 980
Eco24I GRGCYC 1 cut(s) 900
Eco53kI GAGCTC 1 cut(s) 898
Eco91I GGTNACC 1 cut(s) 39
EcoICRI GAGCTC 1 cut(s) 898
EcoO65I GGTNACC 1 cut(s) 39
EcoRII CCWGG 3 cut(s) 35, 345, 963
EcoT38I GRGCYC 1 cut(s) 900
FaeI CATG 3 cut(s) 128, 959, 973
FaqI GGGAC 1 cut(s) 849
FatI CATG 3 cut(s) 124, 955, 969
FauNDI CATATG 2 cut(s) 216, 877
FbaI TGATCA 1 cut(s) 84
FblI GTMKAC 1 cut(s) 474
Fnu4HI GCNGC 1 cut(s) 99
FokI GGATG 7 cut(s) 241, 445, 542, 741, 765, 1013, 1023
FriOI GRGCYC 1 cut(s) 900
Fsp4HI GCNGC 1 cut(s) 99
GlaI GCGC 1 cut(s) 1016
GluI GCNGC 1 cut(s) 99
GsaI CCCAGC 1 cut(s) 450
HaeIII GGCC 4 cut(s) 235, 387, 887, 980
HapII CCGG 1 cut(s) 867
HhaI GCGC 1 cut(s) 1017
Hin1II CATG 3 cut(s) 128, 959, 973
Hin6I GCGC 1 cut(s) 1015
HinP1I GCGC 1 cut(s) 1015
HinfI GANTC 2 cut(s) 7, 789
HpaII CCGG 1 cut(s) 867
HphI GGTGA 2 cut(s) 33, 547
Hpy166II GTNNAC 2 cut(s) 158, 475
Hpy188I TCNGA 5 cut(s) 265, 325, 443, 490, 626
Hpy188III TCNNGA 4 cut(s) 93, 125, 371, 782
Hpy8I GTNNAC 2 cut(s) 158, 475
HpyAV CCTTC 3 cut(s) 142, 146, 207
HpyCH4III ACNGT 1 cut(s) 994
HpyCH4V TGCA 4 cut(s) 185, 253, 631, 908
HpyF10VI GCNNNNNNNGC 1 cut(s) 32
HpyF3I CTNAG 5 cut(s) 324, 623, 762, 768, 975
Hsp92II CATG 3 cut(s) 128, 959, 973
HspAI GCGC 1 cut(s) 1015
Ksp22I TGATCA 1 cut(s) 84
Kzo9I GATC 4 cut(s) 84, 178, 745, 1009
LmnI GCTCC 3 cut(s) 443, 895, 903
Lsp1109I GCAGC 1 cut(s) 110
LweI GCATC 1 cut(s) 588
MabI ACCWGGT 1 cut(s) 345
MaeIII GTNAC 1 cut(s) 39
MalI GATC 4 cut(s) 86, 180, 747, 1011
MboI GATC 4 cut(s) 84, 178, 745, 1009
MboII GAAGA 6 cut(s) 140, 353, 864, 867, 971, 1019
MfeI CAATTG 3 cut(s) 161, 735, 804
MflI RGATCY 2 cut(s) 745, 1009
MhlI GDGCHC 2 cut(s) 526, 900
MlsI TGGCCA 1 cut(s) 887
MluCI AATT 9 cut(s) 63, 161, 365, 392, 606, 651, 717, 735, 804
MluNI TGGCCA 1 cut(s) 887
Mox20I TGGCCA 1 cut(s) 887
MscI TGGCCA 1 cut(s) 887
MseI TTAA 6 cut(s) 362, 396, 498, 599, 612, 650
Msp20I TGGCCA 1 cut(s) 887
MspA1I CMGCKG 1 cut(s) 470
MspI CCGG 1 cut(s) 867
MspR9I CCNGG 4 cut(s) 37, 347, 867, 965
MunI CAATTG 3 cut(s) 161, 735, 804
Mva1269I GAATGC 1 cut(s) 668
MvaI CCWGG 3 cut(s) 37, 347, 965
MwoI GCNNNNNNNGC 1 cut(s) 32
NciI CCSGG 1 cut(s) 867
NdeI CATATG 2 cut(s) 216, 877
NdeII GATC 4 cut(s) 84, 178, 745, 1009
NlaIII CATG 3 cut(s) 128, 959, 973
NmuCI GTSAC 1 cut(s) 39
PagI TCATGA 1 cut(s) 124
PceI AGGCCT 2 cut(s) 235, 980
PctI GAATGC 1 cut(s) 668
PfeI GAWTC 2 cut(s) 7, 789
PkrI GCNGC 1 cut(s) 100
Psp124BI GAGCTC 1 cut(s) 900
Psp6I CCWGG 3 cut(s) 35, 345, 963
PspEI GGTNACC 1 cut(s) 39
PspFI CCCAGC 1 cut(s) 446
PspGI CCWGG 3 cut(s) 35, 345, 963
PspPI GGNCC 1 cut(s) 386
PsuI RGATCY 2 cut(s) 745, 1009
PvuII CAGCTG 1 cut(s) 470
RsaI GTAC 3 cut(s) 157, 357, 755
RsaNI GTAC 3 cut(s) 156, 356, 754
SacI GAGCTC 1 cut(s) 900
SaqAI TTAA 6 cut(s) 362, 396, 498, 599, 612, 650
SatI GCNGC 1 cut(s) 99
Sau3AI GATC 4 cut(s) 84, 178, 745, 1009
Sau96I GGNCC 1 cut(s) 386
ScaI AGTACT 1 cut(s) 755
ScrFI CCNGG 4 cut(s) 37, 347, 867, 965
SduI GDGCHC 2 cut(s) 526, 900
SexAI ACCWGGT 1 cut(s) 345
SfaNI GCATC 1 cut(s) 588
SfcI CTRYAG 1 cut(s) 471
Sse9I AATT 9 cut(s) 63, 161, 365, 392, 606, 651, 717, 735, 804
SseBI AGGCCT 2 cut(s) 235, 980
SsiI CCGC 2 cut(s) 462, 666
SspI AATATT 1 cut(s) 596
SstI GAGCTC 1 cut(s) 900
StuI AGGCCT 2 cut(s) 235, 980
StyD4I CCNGG 4 cut(s) 35, 345, 865, 963
TaaI ACNGT 1 cut(s) 994
TasI AATT 9 cut(s) 63, 161, 365, 392, 606, 651, 717, 735, 804
TatI WGTACW 2 cut(s) 355, 753
TfiI GAWTC 2 cut(s) 7, 789
Tru1I TTAA 6 cut(s) 362, 396, 498, 599, 612, 650
Tru9I TTAA 6 cut(s) 362, 396, 498, 599, 612, 650
TseFI GTSAC 1 cut(s) 39
TseI GCWGC 1 cut(s) 98
Tsp45I GTSAC 1 cut(s) 39
TspDTI ATGAA 8 cut(s) 141, 203, 530, 605, 708, 767, 965, 972
TspGWI ACGGA 1 cut(s) 986
XapI RAATTY 3 cut(s) 63, 365, 392
XmiI GTMKAC 1 cut(s) 474
ZrmI AGTACT 1 cut(s) 755
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.