Rh1BG078400

iron ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000132
Physical Location & Seq
Forward (+)
12254945 .. 12257395
2451 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG078400.1

Sequence Viewer

Length: 1563 bp
ATGTTCCCAGATATCCAAATTCCTTCCCTTAATTATCATGATGATCTTCCTCTCTTTACCTCTCTAGTTGTCCTAGTGATCCTAGTTCTTCTGAATCGGCATTGGAAGAAGAGGAGCCATACTAGTCTAAATGATGATGGTATTCTTCGGTTGCCCCCAGGGCCATGGAAGCTACCTCTTATCGGAAACTTGCATCAGTTAGCTTTGGCTGCTGGTTCTTTACCACATCATTTCTTAACAGACTTGGCCAAGAAATACGGTCCTATGATGCACCTCAAACTTGGACAAGTATCAGCCATCATCATATCATCACCTGACTTAGCCAAGCAAGCGGTAAAGATTTTCTCAGACCGACCAACCGGTTTTCTTGCTGTGGAAATCATCTCTTATAATTCTTCAGGCATAGTTGCTAGTCCTTGTAATGATTACTGGAGAGAAATGCGCAAGATTTGTGCCTTGGAGCTCCTAAGTGCAAAGCGTGTGCAGTCGTTTTCATCATTGAGAGAAGAAGAGACATGGAATCTTGTTCAGTCAATTACTCAATTGTCACAGCCAATCAACCTTAGCGAGATGATTTTCTCCACTGTAAACAGCATTACTGCTCGTGCAGCCTTAGGAAAAAAATGCAAACACCAACAAGAGTTTACATCATTGATCCGCGAAATGATTAGGCTTACTACAGCCTTTGGTGTGCCAGATCTGTTCCCTTCGCTCCAATTCCTCAATCATGTCACAGGGACCAAGTCTGCCATTGAAAGATTGCATGGAAAGATGGACATGATTCTTGTTGATATTATCAATTATCACAAACAAGTACTACAGAGCCAGAGGGCATCCGGTGAAGATCATCAACAGAAAGATCAAGATCTGGTCGACGTGCTTCTACAACTTCAAGAGTCTGGTGAACTTCAATTCCAACTCACAGCCAACCATGTCAAAGCTATAATCTTGGATATTTACACTGCTGGAAGTGAGACTTCAGCAACTACTATAGAGTGGACAATGGCGGAACTTATGAAAAATCCAAGAGTAATGGAGAAAGCACAGGTCGAGATACGCCAAGTTGTTGCAGGAAAGAAGAAAATTCAAGAGGCAGACATTAAGAAACTAGACTACTTGAAGTTGGTAGTAAAAGAAACGCTACGATTGCACCCTCCTATTGGCTTAATCCTAAGACAGGCAAACAAAACATGCAAAGTCAGTGGATATGATATACCGTCTGGAGCCAGGGTCTTGGTCAATGCTTGGGCATTAGGAAGAGACCCGAAACATTGGGGCACCAATGCTGATTGCTTTGAGCCTGAGAGGTTTCAAGGTTCTTCCATTGATTTTAAAGGGTCCGACTTTGAATTCATTCCATTTGGAGCTGGTAAGAGACTGTGTCCAGGCATCTCATTTGGAATTGCTACTGTTGAGATTGCACTTTCTCAGTTGCTCTACTACTTCAACTGGAAACTCCCAAATGGGACAAACCCTCAAGAGCTTGACATGACTGAATCTACAGGATTGAGCACTAGGAAGAAAAACGAATTGAAAGTGATTGCAATTCCTTTCTTTCCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

520

Amino Acids

58.37

Weight (kDa)

8.8

Isoelectric Point (pI)

35.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 52 - 511 2e-94 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 390
Acc16I TGCGCA 1 cut(s) 443
AccB1I GGYRCC 1 cut(s) 1277
AccI GTMKAC 1 cut(s) 873
AccII CGCG 1 cut(s) 660
AciI CCGC 3 cut(s) 332, 658, 1007
AclWI GGATC 2 cut(s) 73, 649
AcoI YGGCCR 1 cut(s) 246
AcsI RAATTY 3 cut(s) 18, 1083, 1349
AcuI CTGAAG 2 cut(s) 381, 963
AfaI GTAC 1 cut(s) 816
AfiI CCNNNNNNNGG 3 cut(s) 182, 1160, 1177
AgeI ACCGGT 1 cut(s) 359
AgsI TTSAA 9 cut(s) 755, 893, 911, 1088, 1120, 1313, 1349, 1447, 1534
AhlI ACTAGT 1 cut(s) 122
AjiI CACGTC 1 cut(s) 877
AjnI CCWGG 3 cut(s) 157, 1226, 1384
AloI GAACNNNNNNTCC 2 cut(s) 897, 929
AluBI AGCT 6 cut(s) 172, 203, 463, 941, 1367, 1483
AluI AGCT 6 cut(s) 172, 203, 463, 941, 1367, 1483
Alw21I GWGCWC 2 cut(s) 465, 1514
Alw26I GTCTC 4 cut(s) 506, 968, 1254, 1369
AlwI GGATC 2 cut(s) 73, 649
AoxI GGCC 2 cut(s) 161, 246
ApeKI GCWGC 2 cut(s) 209, 608
ApoI RAATTY 3 cut(s) 18, 1083, 1349
AsiGI ACCGGT 1 cut(s) 359
Asp700I GAANNNNTTC 1 cut(s) 1353
AspLEI GCGC 1 cut(s) 444
AspS9I GGNCC 4 cut(s) 161, 260, 738, 1338
AsuHPI GGTGA 3 cut(s) 303, 851, 914
AvaII GGWCC 3 cut(s) 260, 738, 1338
AxyI CCTNAGG 1 cut(s) 613
BaeGI GKGCMC 1 cut(s) 1280
BalI TGGCCA 1 cut(s) 248
BanI GGYRCC 1 cut(s) 1277
BanII GRGCYC 1 cut(s) 465
BauI CACGAG 1 cut(s) 603
Bbv12I GWGCWC 2 cut(s) 465, 1514
BbvI GCAGC 2 cut(s) 196, 620
BccI CCATC 3 cut(s) 131, 305, 766
BciT130I CCWGG 3 cut(s) 159, 1228, 1386
BcoDI GTCTC 4 cut(s) 506, 968, 1254, 1369
BcuI ACTAGT 1 cut(s) 122
BfaI CTAG 7 cut(s) 65, 74, 83, 123, 411, 1109, 1515
BfmI CTRYAG 4 cut(s) 678, 818, 990, 1500
BglI GCCNNNNNGGC 1 cut(s) 160
BglII AGATCT 2 cut(s) 697, 865
BisI GCNGC 2 cut(s) 210, 609
BlsI GCNGC 2 cut(s) 211, 610
BmcAI AGTACT 1 cut(s) 816
Bme1390I CCNGG 3 cut(s) 159, 1228, 1386
Bme18I GGWCC 3 cut(s) 260, 738, 1338
BmgBI CACGTC 1 cut(s) 877
BmgT120I GGNCC 4 cut(s) 161, 260, 738, 1338
BmiI GGNNCC 5 cut(s) 116, 739, 1225, 1279, 1339
BmrFI CCNGG 3 cut(s) 159, 1228, 1386
BmsI GCATC 4 cut(s) 202, 258, 842, 1398
BpmI CTGGAG 2 cut(s) 451, 1242
Bpu10I CCTNAGC 1 cut(s) 563
BpuEI CTTGAG 1 cut(s) 1461
BsaBI GATNNNNATC 1 cut(s) 864
BsaI GGTCTC 1 cut(s) 1254
BsaJI CCNNGG 5 cut(s) 157, 158, 164, 456, 1227
BsaWI WCCGGW 2 cut(s) 359, 836
BsaXI ACNNNNNCTCC 2 cut(s) 1215, 1245
Bsc4I CCNNNNNNNGG 3 cut(s) 182, 1160, 1177
Bse118I RCCGGY 1 cut(s) 359
Bse1I ACTGG 2 cut(s) 434, 1454
Bse21I CCTNAGG 1 cut(s) 613
Bse8I GATNNNNATC 1 cut(s) 864
BseBI CCWGG 3 cut(s) 159, 1228, 1386
BseDI CCNNGG 5 cut(s) 157, 158, 164, 456, 1227
BseGI GGATG 1 cut(s) 833
BseJI GATNNNNATC 1 cut(s) 864
BseLI CCNNNNNNNGG 3 cut(s) 182, 1160, 1177
BseMII CTCAG 3 cut(s) 360, 1293, 1442
BseNI ACTGG 2 cut(s) 434, 1454
BseRI GAGGAG 1 cut(s) 127
BseSI GKGCMC 1 cut(s) 1280
BseXI GCAGC 2 cut(s) 196, 620
BsgI GTGCAG 2 cut(s) 503, 627
Bsh1236I CGCG 1 cut(s) 660
BshFI GGCC 2 cut(s) 163, 248
BshNI GGYRCC 1 cut(s) 1277
BshTI ACCGGT 1 cut(s) 359
BsiHKAI GWGCWC 2 cut(s) 465, 1514
BsiSI CCGG 2 cut(s) 360, 837
BslFI GGGAC 2 cut(s) 751, 1480
BslI CCNNNNNNNGG 3 cut(s) 182, 1160, 1177
BsmAI GTCTC 4 cut(s) 506, 968, 1254, 1369
BsmFI GGGAC 2 cut(s) 751, 1480
BsnI GGCC 2 cut(s) 163, 248
Bso31I GGTCTC 1 cut(s) 1254
Bsp1286I GDGCHC 3 cut(s) 465, 1280, 1514
Bsp143I GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
Bsp19I CCATGG 1 cut(s) 164
BspACI CCGC 3 cut(s) 332, 658, 1007
BspANI GGCC 2 cut(s) 163, 248
BspCNI CTCAG 3 cut(s) 359, 1294, 1441
BspFNI CGCG 1 cut(s) 660
BspHI TCATGA 1 cut(s) 37
BspLI GGNNCC 5 cut(s) 116, 739, 1225, 1279, 1339
BspPI GGATC 2 cut(s) 73, 649
BspT107I GGYRCC 1 cut(s) 1277
BspTNI GGTCTC 1 cut(s) 1254
BsrFI RCCGGY 1 cut(s) 359
BsrI ACTGG 2 cut(s) 434, 1454
BssAI RCCGGY 1 cut(s) 359
BssECI CCNNGG 5 cut(s) 157, 158, 164, 456, 1227
BssMI GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
BssSI CACGAG 1 cut(s) 603
BssT1I CCWWGG 2 cut(s) 164, 456
Bst2BI CACGAG 1 cut(s) 603
Bst2UI CCWGG 3 cut(s) 159, 1228, 1386
Bst4CI ACNGT 5 cut(s) 260, 586, 1218, 1380, 1411
Bst6I CTCTTC 3 cut(s) 104, 504, 1252
BstC8I GCNNGC 1 cut(s) 330
BstDEI CTNAG 8 cut(s) 319, 346, 467, 563, 613, 1172, 1302, 1428
BstDSI CCRYGG 1 cut(s) 164
BstENI CCTNNNNNAGG 1 cut(s) 1175
BstF5I GGATG 1 cut(s) 833
BstFNI CGCG 1 cut(s) 660
BstHHI GCGC 1 cut(s) 444
BstKTI GATC 7 cut(s) 46, 81, 657, 700, 847, 862, 868
BstMAI GTCTC 4 cut(s) 506, 968, 1254, 1369
BstMBI GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
BstMWI GCNNNNNNNGC 6 cut(s) 160, 169, 209, 329, 608, 1147
BstNI CCWGG 3 cut(s) 159, 1228, 1386
BstNSI RCATGY 1 cut(s) 1194
BstSCI CCNGG 3 cut(s) 157, 1226, 1384
BstSFI CTRYAG 4 cut(s) 678, 818, 990, 1500
BstSLI GKGCMC 1 cut(s) 1280
BstUI CGCG 1 cut(s) 660
BstV1I GCAGC 2 cut(s) 196, 620
BstX2I RGATCY 2 cut(s) 697, 865
BstXI CCANNNNNNTGG 2 cut(s) 165, 1234
BstYI RGATCY 2 cut(s) 697, 865
Bsu36I CCTNAGG 1 cut(s) 613
BsuRI GGCC 2 cut(s) 163, 248
BtgI CCRYGG 1 cut(s) 164
BtrI CACGTC 1 cut(s) 877
BtsCI GGATG 1 cut(s) 833
BtsI GCAGTG 1 cut(s) 960
BtsIMutI CAGTG 3 cut(s) 582, 960, 1207
Cac8I GCNNGC 1 cut(s) 330
CciI TCATGA 1 cut(s) 37
CfoI GCGC 1 cut(s) 444
Cfr10I RCCGGY 1 cut(s) 359
Cfr13I GGNCC 4 cut(s) 161, 260, 738, 1338
Csp6I GTAC 1 cut(s) 815
CspAI ACCGGT 1 cut(s) 359
CspCI CAANNNNNGTGG 2 cut(s) 1183, 1218
CviAII CATG 9 cut(s) 38, 165, 516, 728, 764, 778, 932, 1191, 1489
CviQI GTAC 1 cut(s) 815
DdeI CTNAG 8 cut(s) 319, 346, 467, 563, 613, 1172, 1302, 1428
DpnI GATC 7 cut(s) 45, 80, 656, 699, 846, 861, 867
DpnII GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
DraI TTTAAA 1 cut(s) 1333
EaeI YGGCCR 1 cut(s) 246
Eam1104I CTCTTC 3 cut(s) 104, 504, 1252
EarI CTCTTC 3 cut(s) 104, 504, 1252
EciI GGCGGA 1 cut(s) 1022
Ecl136II GAGCTC 1 cut(s) 463
Eco130I CCWWGG 2 cut(s) 164, 456
Eco24I GRGCYC 1 cut(s) 465
Eco31I GGTCTC 1 cut(s) 1254
Eco32I GATATC 1 cut(s) 13
Eco47I GGWCC 3 cut(s) 260, 738, 1338
Eco53kI GAGCTC 1 cut(s) 463
Eco57I CTGAAG 2 cut(s) 381, 963
Eco81I CCTNAGG 1 cut(s) 613
EcoICRI GAGCTC 1 cut(s) 463
EcoNI CCTNNNNNAGG 1 cut(s) 1175
EcoRI GAATTC 1 cut(s) 1349
EcoRII CCWGG 3 cut(s) 157, 1226, 1384
EcoRV GATATC 1 cut(s) 13
EcoT14I CCWWGG 2 cut(s) 164, 456
EcoT38I GRGCYC 1 cut(s) 465
ErhI CCWWGG 2 cut(s) 164, 456
FaeI CATG 9 cut(s) 41, 168, 519, 731, 767, 781, 935, 1194, 1492
FalI AAGNNNNNCTT 2 cut(s) 961, 993
FaqI GGGAC 2 cut(s) 751, 1480
FatI CATG 9 cut(s) 37, 164, 515, 727, 763, 777, 931, 1190, 1488
FblI GTMKAC 1 cut(s) 873
Fnu4HI GCNGC 2 cut(s) 210, 609
FokI GGATG 1 cut(s) 820
FriOI GRGCYC 1 cut(s) 465
Fsp4HI GCNGC 2 cut(s) 210, 609
FspBI CTAG 7 cut(s) 65, 74, 83, 123, 411, 1109, 1515
FspI TGCGCA 1 cut(s) 443
GlaI GCGC 1 cut(s) 443
GluI GCNGC 2 cut(s) 210, 609
GsuI CTGGAG 2 cut(s) 451, 1242
HaeIII GGCC 2 cut(s) 163, 248
HapII CCGG 2 cut(s) 360, 837
HhaI GCGC 1 cut(s) 444
Hin1II CATG 9 cut(s) 41, 168, 519, 731, 767, 781, 935, 1194, 1492
Hin6I GCGC 1 cut(s) 442
HinP1I GCGC 1 cut(s) 442
HincII GTYRAC 1 cut(s) 874
HindII GTYRAC 1 cut(s) 874
HinfI GANTC 5 cut(s) 94, 520, 781, 896, 1496
HpaII CCGG 2 cut(s) 360, 837
HphI GGTGA 3 cut(s) 303, 851, 914
Hpy166II GTNNAC 5 cut(s) 589, 645, 874, 905, 999
Hpy188I TCNGA 4 cut(s) 93, 185, 349, 1342
Hpy188III TCNNGA 7 cut(s) 38, 863, 893, 1051, 1088, 1221, 1478
Hpy8I GTNNAC 5 cut(s) 589, 645, 874, 905, 999
Hpy99I CGWCG 1 cut(s) 878
HpyAV CCTTC 2 cut(s) 33, 717
HpyCH4III ACNGT 5 cut(s) 260, 586, 1218, 1380, 1411
HpyCH4IV ACGT 1 cut(s) 876
HpyF10VI GCNNNNNNNGC 6 cut(s) 160, 169, 209, 329, 608, 1147
HpyF3I CTNAG 8 cut(s) 319, 346, 467, 563, 613, 1172, 1302, 1428
HpySE526I ACGT 1 cut(s) 876
Hsp92II CATG 9 cut(s) 41, 168, 519, 731, 767, 781, 935, 1194, 1492
HspAI GCGC 1 cut(s) 442
Kzo9I GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
LmnI GCTCC 6 cut(s) 114, 460, 468, 717, 1223, 1364
Lsp1109I GCAGC 2 cut(s) 196, 620
LweI GCATC 4 cut(s) 202, 258, 842, 1398
MaeI CTAG 7 cut(s) 65, 74, 83, 123, 411, 1109, 1515
MaeII ACGT 1 cut(s) 876
MaeIII GTNAC 2 cut(s) 546, 730
MalI GATC 7 cut(s) 45, 80, 656, 699, 846, 861, 867
MboI GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
MfeI CAATTG 1 cut(s) 542
MflI RGATCY 2 cut(s) 697, 865
MhlI GDGCHC 3 cut(s) 465, 1280, 1514
MlsI TGGCCA 1 cut(s) 248
MluNI TGGCCA 1 cut(s) 248
MlyI GAGTC 1 cut(s) 905
MmeI TCCRAC 2 cut(s) 940, 1365
Mox20I TGGCCA 1 cut(s) 248
MroXI GAANNNNTTC 1 cut(s) 1353
MscI TGGCCA 1 cut(s) 248
MseI TTAA 5 cut(s) 30, 236, 1101, 1166, 1332
Msp20I TGGCCA 1 cut(s) 248
MspI CCGG 2 cut(s) 360, 837
MspR9I CCNGG 3 cut(s) 159, 1228, 1386
MunI CAATTG 1 cut(s) 542
MvaI CCWGG 3 cut(s) 159, 1228, 1386
MvnI CGCG 1 cut(s) 660
MwoI GCNNNNNNNGC 6 cut(s) 160, 169, 209, 329, 608, 1147
NcoI CCATGG 1 cut(s) 164
NdeII GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
NlaIII CATG 9 cut(s) 41, 168, 519, 731, 767, 781, 935, 1194, 1492
NlaIV GGNNCC 5 cut(s) 116, 739, 1225, 1279, 1339
NmuCI GTSAC 2 cut(s) 546, 730
NsbI TGCGCA 1 cut(s) 443
NspI RCATGY 1 cut(s) 1194
PagI TCATGA 1 cut(s) 37
PasI CCCWGGG 1 cut(s) 158
PdmI GAANNNNTTC 1 cut(s) 1353
PfeI GAWTC 4 cut(s) 94, 520, 781, 1496
PflFI GACNNNGTC 2 cut(s) 742, 1380
PinAI ACCGGT 1 cut(s) 359
PkrI GCNGC 2 cut(s) 211, 610
PleI GAGTC 1 cut(s) 904
PpsI GAGTC 1 cut(s) 904
PsiI TTATAA 1 cut(s) 390
Psp124BI GAGCTC 1 cut(s) 465
Psp6I CCWGG 3 cut(s) 157, 1226, 1384
PspGI CCWGG 3 cut(s) 157, 1226, 1384
PspN4I GGNNCC 5 cut(s) 116, 739, 1225, 1279, 1339
PspPI GGNCC 4 cut(s) 161, 260, 738, 1338
PsuI RGATCY 2 cut(s) 697, 865
PsyI GACNNNGTC 2 cut(s) 742, 1380
RsaI GTAC 1 cut(s) 816
RsaNI GTAC 1 cut(s) 815
SacI GAGCTC 1 cut(s) 465
SalI GTCGAC 1 cut(s) 872
SaqAI TTAA 5 cut(s) 30, 236, 1101, 1166, 1332
SatI GCNGC 2 cut(s) 210, 609
Sau3AI GATC 7 cut(s) 43, 78, 654, 697, 844, 859, 865
Sau96I GGNCC 4 cut(s) 161, 260, 738, 1338
ScaI AGTACT 1 cut(s) 816
SchI GAGTC 1 cut(s) 905
ScrFI CCNGG 3 cut(s) 159, 1228, 1386
SduI GDGCHC 3 cut(s) 465, 1280, 1514
SfaNI GCATC 4 cut(s) 202, 258, 842, 1398
SfcI CTRYAG 4 cut(s) 678, 818, 990, 1500
SinI GGWCC 3 cut(s) 260, 738, 1338
SmlI CTYRAG 1 cut(s) 1476
SmoI CTYRAG 1 cut(s) 1476
SpeI ACTAGT 1 cut(s) 122
SsiI CCGC 3 cut(s) 332, 658, 1007
SspMI CTAG 7 cut(s) 65, 74, 83, 123, 411, 1109, 1515
SstI GAGCTC 1 cut(s) 465
StyD4I CCNGG 3 cut(s) 157, 1226, 1384
StyI CCWWGG 2 cut(s) 164, 456
TaaI ACNGT 5 cut(s) 260, 586, 1218, 1380, 1411
TaiI ACGT 1 cut(s) 879
TaqI TCGA 2 cut(s) 873, 1050
TaqII GACCGA 1 cut(s) 366
TatI WGTACW 1 cut(s) 814
TfiI GAWTC 4 cut(s) 94, 520, 781, 1496
Tru1I TTAA 5 cut(s) 30, 236, 1101, 1166, 1332
Tru9I TTAA 5 cut(s) 30, 236, 1101, 1166, 1332
TscAI CASTG 3 cut(s) 589, 967, 1207
TseFI GTSAC 2 cut(s) 546, 730
TseI GCWGC 2 cut(s) 209, 608
Tsp45I GTSAC 2 cut(s) 546, 730
TspDTI ATGAA 3 cut(s) 483, 1031, 1342
TspRI CASTG 3 cut(s) 589, 967, 1207
Tth111I GACNNNGTC 2 cut(s) 742, 1380
VpaK11BI GGWCC 3 cut(s) 260, 738, 1338
XagI CCTNNNNNAGG 1 cut(s) 1175
XapI RAATTY 3 cut(s) 18, 1083, 1349
XceI RCATGY 1 cut(s) 1194
XmiI GTMKAC 1 cut(s) 873
XmnI GAANNNNTTC 1 cut(s) 1353
XspI CTAG 7 cut(s) 65, 74, 83, 123, 411, 1109, 1515
ZrmI AGTACT 1 cut(s) 816
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.