RLG00000030155

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
56529887 .. 56534910
5024 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000030155

Sequence Viewer

Length: 576 bp
ATGGAGAAATTGAAAGGGTATCGCCGTATGAGCCACGAGGCGCCTTCGACTTGGTGCGGCTTCAGCGTCGCCGTCACGCCGAGCTCTTCAATCTACAAATTTGATCGAAGCCTTGAGATATTTGGTGGTGGGGGTGGGACATCATCTACAACTGTTGATTGGACAATGTCAGAAATGATTAAAAATCCGAGAATAATGAAAATTGCACAGAATGAAACACTAAGGTTACACCCTCCTAATCCCTTGCTACTTCCAAGAGAATGCAGTGAGAGGTGTGAGATTGATGGATATGAAATACCTGTCAAAACCAAGGTAGTTATCAATGCATGGGCAATTGCTACAGATCCAAGTTACTGGACTGAGAGAATTTGCCCTGGCATATCATTTGGTCTGGCCAACGTCGAGCTCCAACTTGCAATGTTGTTATACCATTTTGATTGGAAACTCCCCAAAGGAATGAAGCACGATGACCTGGACATGACTGAGGCCTTCAGTGTCACATCCAGCAAGAAACAGGATCTGCACTTGATTCCCATTCCATATCATCATCCACCTACTGAAAAAGCCCAAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

192

Amino Acids

21.64

Weight (kDa)

6.65

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 71 - 120 4.5e-14 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 40
AciI CCGC 1 cut(s) 57
AclWI GGATC 2 cut(s) 338, 525
AcoI YGGCCR 1 cut(s) 393
AcsI RAATTY 2 cut(s) 98, 366
AcuI CTGAAG 2 cut(s) 46, 475
AcyI GRCGYC 1 cut(s) 41
AgsI TTSAA 2 cut(s) 13, 90
AjnI CCWGG 2 cut(s) 373, 471
AluBI AGCT 2 cut(s) 84, 406
AluI AGCT 2 cut(s) 84, 406
Alw21I GWGCWC 2 cut(s) 86, 408
AlwI GGATC 2 cut(s) 338, 525
AlwNI CAGNNNCTG 1 cut(s) 520
AoxI GGCC 2 cut(s) 393, 486
ApoI RAATTY 2 cut(s) 98, 366
AspLEI GCGC 1 cut(s) 43
BalI TGGCCA 1 cut(s) 395
BanI GGYRCC 1 cut(s) 40
BanII GRGCYC 2 cut(s) 86, 408
BauI CACGAG 1 cut(s) 35
Bbv12I GWGCWC 2 cut(s) 86, 408
BccI CCATC 1 cut(s) 278
BceAI ACGGC 2 cut(s) 9, 56
BciT130I CCWGG 2 cut(s) 375, 473
BfmI CTRYAG 1 cut(s) 339
BfoI RGCGCY 1 cut(s) 44
BisI GCNGC 1 cut(s) 58
BlsI GCNGC 1 cut(s) 59
Bme1390I CCNGG 2 cut(s) 375, 473
BmiI GGNNCC 1 cut(s) 42
BmrFI CCNGG 2 cut(s) 375, 473
BpuEI CTTGAG 1 cut(s) 134
BsaHI GRCGYC 1 cut(s) 41
BsaJI CCNNGG 2 cut(s) 309, 373
Bse1I ACTGG 1 cut(s) 359
Bse3DI GCAATG 1 cut(s) 423
BseBI CCWGG 2 cut(s) 375, 473
BseDI CCNNGG 2 cut(s) 309, 373
BseGI GGATG 2 cut(s) 500, 547
BseMI GCAATG 1 cut(s) 423
BseMII CTCAG 2 cut(s) 351, 474
BseNI ACTGG 1 cut(s) 359
BsgI GTGCAG 1 cut(s) 506
BshFI GGCC 2 cut(s) 395, 488
BshNI GGYRCC 1 cut(s) 40
BsiHKAI GWGCWC 2 cut(s) 86, 408
BslFI GGGAC 1 cut(s) 151
BsmFI GGGAC 1 cut(s) 151
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 2 cut(s) 395, 488
Bsp1286I GDGCHC 2 cut(s) 86, 408
Bsp143I GATC 3 cut(s) 103, 343, 517
BspACI CCGC 1 cut(s) 57
BspANI GGCC 2 cut(s) 395, 488
BspCNI CTCAG 2 cut(s) 352, 475
BspLI GGNNCC 1 cut(s) 42
BspPI GGATC 2 cut(s) 338, 525
BspQI GCTCTTC 1 cut(s) 91
BspT107I GGYRCC 1 cut(s) 40
BsrDI GCAATG 1 cut(s) 423
BsrI ACTGG 1 cut(s) 359
BssECI CCNNGG 2 cut(s) 309, 373
BssMI GATC 3 cut(s) 103, 343, 517
BssNI GRCGYC 1 cut(s) 41
BssSI CACGAG 1 cut(s) 35
BssT1I CCWWGG 1 cut(s) 309
Bst2BI CACGAG 1 cut(s) 35
Bst2UI CCWGG 2 cut(s) 375, 473
Bst4CI ACNGT 1 cut(s) 154
Bst6I CTCTTC 1 cut(s) 91
BstACI GRCGYC 1 cut(s) 41
BstDEI CTNAG 3 cut(s) 221, 360, 483
BstF5I GGATG 2 cut(s) 500, 547
BstH2I RGCGCY 1 cut(s) 44
BstHHI GCGC 1 cut(s) 43
BstKTI GATC 3 cut(s) 106, 346, 520
BstMBI GATC 3 cut(s) 103, 343, 517
BstMWI GCNNNNNNNGC 2 cut(s) 30, 63
BstNI CCWGG 2 cut(s) 375, 473
BstSCI CCNGG 2 cut(s) 373, 471
BstSFI CTRYAG 1 cut(s) 339
BstX2I RGATCY 2 cut(s) 343, 517
BstXI CCANNNNNNTGG 1 cut(s) 354
BstYI RGATCY 2 cut(s) 343, 517
BsuRI GGCC 2 cut(s) 395, 488
BtsCI GGATG 2 cut(s) 500, 547
BtsI GCAGTG 1 cut(s) 271
BtsIMutI CAGTG 2 cut(s) 271, 499
CaiI CAGNNNCTG 1 cut(s) 520
CfoI GCGC 1 cut(s) 43
CseI GACGC 1 cut(s) 55
CviAII CATG 2 cut(s) 327, 478
CviJI RGCY 8 cut(s) 33, 60, 84, 111, 395, 406, 488, 566
CviKI_1 RGCY 8 cut(s) 33, 60, 84, 111, 395, 406, 488, 566
DdeI CTNAG 3 cut(s) 221, 360, 483
DinI GGCGCC 1 cut(s) 42
DpnI GATC 3 cut(s) 105, 345, 519
DpnII GATC 3 cut(s) 103, 343, 517
EaeI YGGCCR 1 cut(s) 393
Eam1104I CTCTTC 1 cut(s) 91
EarI CTCTTC 1 cut(s) 91
Ecl136II GAGCTC 2 cut(s) 84, 406
Eco130I CCWWGG 1 cut(s) 309
Eco147I AGGCCT 1 cut(s) 488
Eco24I GRGCYC 2 cut(s) 86, 408
Eco53kI GAGCTC 2 cut(s) 84, 406
Eco57I CTGAAG 2 cut(s) 46, 475
EcoICRI GAGCTC 2 cut(s) 84, 406
EcoRII CCWGG 2 cut(s) 373, 471
EcoT14I CCWWGG 1 cut(s) 309
EcoT22I ATGCAT 1 cut(s) 328
EcoT38I GRGCYC 2 cut(s) 86, 408
EgeI GGCGCC 1 cut(s) 42
EheI GGCGCC 1 cut(s) 42
ErhI CCWWGG 1 cut(s) 309
FaeI CATG 2 cut(s) 330, 481
FaiI YATR 8 cut(s) 29, 291, 328, 380, 427, 479, 541, 574
FaqI GGGAC 1 cut(s) 151
FatI CATG 2 cut(s) 326, 477
Fnu4HI GCNGC 1 cut(s) 58
FokI GGATG 2 cut(s) 487, 534
FriOI GRGCYC 2 cut(s) 86, 408
Fsp4HI GCNGC 1 cut(s) 58
GlaI GCGC 1 cut(s) 42
GluI GCNGC 1 cut(s) 58
HaeII RGCGCY 1 cut(s) 44
HaeIII GGCC 2 cut(s) 395, 488
HgaI GACGC 1 cut(s) 55
HhaI GCGC 1 cut(s) 43
Hin1I GRCGYC 1 cut(s) 41
Hin1II CATG 2 cut(s) 330, 481
Hin6I GCGC 1 cut(s) 41
HinP1I GCGC 1 cut(s) 41
HinfI GANTC 1 cut(s) 529
Hpy188I TCNGA 2 cut(s) 172, 189
Hpy99I CGWCG 2 cut(s) 71, 404
HpyAV CCTTC 2 cut(s) 54, 499
HpyCH4III ACNGT 1 cut(s) 154
HpyCH4IV ACGT 1 cut(s) 399
HpyCH4V TGCA 5 cut(s) 206, 264, 326, 416, 523
HpyF10VI GCNNNNNNNGC 2 cut(s) 30, 63
HpyF3I CTNAG 3 cut(s) 221, 360, 483
HpySE526I ACGT 1 cut(s) 399
Hsp92I GRCGYC 1 cut(s) 41
Hsp92II CATG 2 cut(s) 330, 481
HspAI GCGC 1 cut(s) 41
KasI GGCGCC 1 cut(s) 40
Kzo9I GATC 3 cut(s) 103, 343, 517
LguI GCTCTTC 1 cut(s) 91
LmnI GCTCC 1 cut(s) 411
LpnPI CCDG 9 cut(s) 312, 340, 360, 377, 387, 458, 485, 500, 517
MaeII ACGT 1 cut(s) 399
MaeIII GTNAC 4 cut(s) 73, 225, 350, 496
MalI GATC 3 cut(s) 105, 345, 519
MboI GATC 3 cut(s) 103, 343, 517
MboII GAAGA 1 cut(s) 78
MfeI CAATTG 1 cut(s) 333
MflI RGATCY 2 cut(s) 343, 517
MhlI GDGCHC 2 cut(s) 86, 408
MlsI TGGCCA 1 cut(s) 395
MluCI AATT 5 cut(s) 8, 98, 201, 333, 366
MluNI TGGCCA 1 cut(s) 395
Mly113I GGCGCC 1 cut(s) 41
MmeI TCCRAC 1 cut(s) 433
MnlI CCTC 4 cut(s) 31, 243, 264, 478
Mox20I TGGCCA 1 cut(s) 395
Mph1103I ATGCAT 1 cut(s) 328
MscI TGGCCA 1 cut(s) 395
MseI TTAA 1 cut(s) 180
Msp20I TGGCCA 1 cut(s) 395
MspR9I CCNGG 2 cut(s) 375, 473
MunI CAATTG 1 cut(s) 333
Mva1269I GAATGC 1 cut(s) 266
MvaI CCWGG 2 cut(s) 375, 473
MwoI GCNNNNNNNGC 2 cut(s) 30, 63
NarI GGCGCC 1 cut(s) 41
NdeII GATC 3 cut(s) 103, 343, 517
NlaIII CATG 2 cut(s) 330, 481
NlaIV GGNNCC 1 cut(s) 42
NmeAIII GCCGAG 1 cut(s) 105
NmuCI GTSAC 2 cut(s) 73, 496
NsiI ATGCAT 1 cut(s) 328
PceI AGGCCT 1 cut(s) 488
PciSI GCTCTTC 1 cut(s) 91
PctI GAATGC 1 cut(s) 266
PfeI GAWTC 1 cut(s) 529
PflFI GACNNNGTC 1 cut(s) 166
PkrI GCNGC 1 cut(s) 59
PluTI GGCGCC 1 cut(s) 44
Psp124BI GAGCTC 2 cut(s) 86, 408
Psp6I CCWGG 2 cut(s) 373, 471
PspGI CCWGG 2 cut(s) 373, 471
PspN4I GGNNCC 1 cut(s) 42
PstNI CAGNNNCTG 1 cut(s) 520
PsuI RGATCY 2 cut(s) 343, 517
PsyI GACNNNGTC 1 cut(s) 166
SacI GAGCTC 2 cut(s) 86, 408
SapI GCTCTTC 1 cut(s) 91
SaqAI TTAA 1 cut(s) 180
SatI GCNGC 1 cut(s) 58
Sau3AI GATC 3 cut(s) 103, 343, 517
ScrFI CCNGG 2 cut(s) 375, 473
SduI GDGCHC 2 cut(s) 86, 408
SetI ASST 9 cut(s) 86, 227, 275, 301, 315, 402, 408, 474, 556
SfcI CTRYAG 1 cut(s) 339
SfoI GGCGCC 1 cut(s) 42
SmlI CTYRAG 1 cut(s) 113
SmoI CTYRAG 1 cut(s) 113
Sse9I AATT 5 cut(s) 8, 98, 201, 333, 366
SseBI AGGCCT 1 cut(s) 488
SsiI CCGC 1 cut(s) 57
SspDI GGCGCC 1 cut(s) 40
SstI GAGCTC 2 cut(s) 86, 408
StuI AGGCCT 1 cut(s) 488
StyD4I CCNGG 2 cut(s) 373, 471
StyI CCWWGG 1 cut(s) 309
TaaI ACNGT 1 cut(s) 154
TaiI ACGT 1 cut(s) 402
TaqI TCGA 3 cut(s) 47, 106, 402
TasI AATT 5 cut(s) 8, 98, 201, 333, 366
TauI GCSGC 1 cut(s) 60
TfiI GAWTC 1 cut(s) 529
Tru1I TTAA 1 cut(s) 180
Tru9I TTAA 1 cut(s) 180
TscAI CASTG 2 cut(s) 271, 499
TseFI GTSAC 2 cut(s) 73, 496
Tsp45I GTSAC 2 cut(s) 73, 496
TspDTI ATGAA 4 cut(s) 212, 228, 306, 473
TspRI CASTG 2 cut(s) 271, 499
Tth111I GACNNNGTC 1 cut(s) 166
XapI RAATTY 2 cut(s) 98, 366
Zsp2I ATGCAT 1 cut(s) 328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.