MD11G1202500.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000132
Physical Location & Seq
Forward (+)
29379273 .. 29381046
1774 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1202500.v1.1.491

Sequence Viewer

Length: 1521 bp
ATGGAGATTCATTTCCCTTCCTTCGAACTTGTGGCTACCTTCTTGCTCTTTCTGATCATGATTCTGAAAATAGGGAAGAGAGCCAAAATAAATTTACCCCCAGGGCCATGGAAGTTACCATTTATAGGAAACTTACACCAGCTCGTTGGCTCTATACCCCATCACGGACTGAGAGACTTGGCCAAGAAATACGGAGCGCTTATGCACCTGAAGCTCGGAGAAGTGTCCACCATAGTTGTCTCATCAGCAGAGTTTGCCAAAGAGGTAATGAAAACCCATGATGTTATCTTTGCATCAAGGCCTCACATTCTTGCTAATAGTATTCTCACTTATGGTGATACAAACATTGGCTTTGCACCATACGGTGATTATTGGAGACAACTACGGAAAATTTGCACACTTGAGCTTTTAAGCATGAAACGTGTTCAATCTTTTCGATCTCTTAGGGAAGAAGAGGTATTCAATCTCATTAAATTGATTCGATTAAGAGCAGAAACGCCTATCAATATAACTGAGCAAATTTACTCATTCACATACGGATTCACATCACGAGCTGCCTTTGGTATAAAATCAAAAGATCAGGACAAATTCATAGATATTGTGAAGCAAGCAATGAAGGTGGCAGGAGGCTTTGATGTTGCAGATGTTTTTCCATCTGTCAGTTTGCTGCATCTGATAAGTGGGATGAGGCCCAAACTTGAGAGGCTACATAAAGAAGCTGATAGGATAATGGAAAACATCATCAAAGAACATAAAAAAGATATGGCAACATCCAAAAGTCAAGACGTTGAAGCAAGGGAAGACCTGATAGATGTTCTTTTAAAATTTCATGAGGAGGAGAGTGGCCTTGAATTTTCCCTAACAGCTGACAACGTCAAAGCAATAATCTTGGAAACTTTTGGTGCCGGGGGAGAGACAGCAGCTACAACTGTAAATTGGGCAATATCAGAAATGATAAAAAATCCAAGAATAATGCAGAAGGCACAGGCTGAGGTGAGGGAAATATTCAATGCAAAAGGGCAGGTAGATGAAACAGAAATTAAAGAGATGATGTATTTGAACTTAGTGATCAAGGAGACACTGAGGTTGCACCCTCCTTTTCCTCTGTTACTTCCAAGGGAATGCCGAGAGAGTTGTAAGATTGATGGATATGAAATACCCGTCAAGACTAAAGTAGTTATCAATGCATGGGCAATTGGAAGAGATCCCAACTACTGGACTAATCCCGACAGCTTTTATCCAGAGAGGTTCCTTGACAGCTCCATTGACTTGAAGGGAAAAAACTTTGAATTTATTCCATTTGGTGCCGGAAGGAGAATGTGTCCGGGCATGTCATTTGGTCTTGCCAGTGTAGAGTTCCCACTTGCGTCGTTGTTGTACCACTTTGATTGGAAACTCTCCAATGGAATGAAGCATGATGAAGACCTGGACATGACTGAGGCCTTTGGCGTTTCGGTCCGAAGGAAACAAGACCTGCACTTGATTCCCATTCCTTATCATCCTCCAACTACTGGAAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

507

Amino Acids

57.58

Weight (kDa)

7.72

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 33 - 477 6.7e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 1012, 1482
AccB1I GGYRCC 2 cut(s) 902, 1304
AccB7I CCANNNNNTGG 2 cut(s) 1215, 1511
AclWI GGATC 1 cut(s) 1199
AcoI YGGCCR 1 cut(s) 180
AcsI RAATTY 7 cut(s) 91, 390, 519, 587, 824, 851, 1289
AcuI CTGAAG 1 cut(s) 230
AfaI GTAC 1 cut(s) 1379
AfeI AGCGCT 1 cut(s) 198
AfiI CCNNNNNNNGG 4 cut(s) 125, 164, 1215, 1511
AflIII ACRYGT 1 cut(s) 421
AgsI TTSAA 8 cut(s) 428, 463, 791, 851, 1009, 1060, 1273, 1289
AjnI CCWGG 2 cut(s) 100, 1425
AluBI AGCT 9 cut(s) 142, 214, 406, 554, 719, 866, 923, 1233, 1260
AluI AGCT 9 cut(s) 142, 214, 406, 554, 719, 866, 923, 1233, 1260
Alw26I GTCTC 5 cut(s) 168, 244, 370, 908, 1070
AlwI GGATC 1 cut(s) 1199
Aor51HI AGCGCT 1 cut(s) 198
AoxI GGCC 6 cut(s) 104, 180, 299, 689, 844, 1440
ApeKI GCWGC 3 cut(s) 554, 667, 920
ApoI RAATTY 7 cut(s) 91, 390, 519, 587, 824, 851, 1289
Asp700I GAANNNNTTC 1 cut(s) 1293
AspLEI GCGC 1 cut(s) 199
AspS9I GGNCC 3 cut(s) 104, 690, 1456
AsuC2I CCSGG 2 cut(s) 907, 1326
AsuHPI GGTGA 3 cut(s) 347, 377, 1006
AsuII TTCGAA 1 cut(s) 24
AvaII GGWCC 1 cut(s) 1456
BalI TGGCCA 1 cut(s) 182
BanI GGYRCC 2 cut(s) 902, 1304
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 2 cut(s) 807, 1428
BbvCI CCTCAGC 1 cut(s) 990
BbvI GCAGC 3 cut(s) 541, 654, 932
BccI CCATC 3 cut(s) 168, 661, 1139
BciT130I CCWGG 2 cut(s) 102, 1427
BclI TGATCA 2 cut(s) 54, 1068
BcnI CCSGG 2 cut(s) 907, 1326
BcoDI GTCTC 5 cut(s) 168, 244, 370, 908, 1070
BfoI RGCGCY 1 cut(s) 200
BfuAI ACCTGC 2 cut(s) 1012, 1482
BisI GCNGC 3 cut(s) 555, 668, 921
BlsI GCNGC 3 cut(s) 556, 669, 922
Bme1390I CCNGG 4 cut(s) 102, 907, 1326, 1427
Bme18I GGWCC 1 cut(s) 1456
BmgT120I GGNCC 3 cut(s) 104, 690, 1456
BmiI GGNNCC 3 cut(s) 904, 1250, 1306
BmrFI CCNGG 4 cut(s) 102, 907, 1326, 1427
BmsI GCATC 2 cut(s) 302, 679
BpiI GAAGAC 2 cut(s) 807, 1428
Bpu10I CCTNAGC 1 cut(s) 990
Bpu14I TTCGAA 1 cut(s) 24
BpuEI CTTGAG 2 cut(s) 422, 719
BpuMI CCSGG 2 cut(s) 907, 1326
BsaBI GATNNNNATC 1 cut(s) 544
BsaJI CCNNGG 5 cut(s) 100, 101, 107, 906, 1115
BsaXI ACNNNNNCTCC 2 cut(s) 1306, 1336
Bsc4I CCNNNNNNNGG 4 cut(s) 125, 164, 1215, 1511
Bse1I ACTGG 3 cut(s) 1220, 1347, 1516
Bse3DI GCAATG 1 cut(s) 618
Bse8I GATNNNNATC 1 cut(s) 544
BseBI CCWGG 2 cut(s) 102, 1427
BseDI CCNNGG 5 cut(s) 100, 101, 107, 906, 1115
BseGI GGATG 3 cut(s) 690, 770, 1498
BseJI GATNNNNATC 1 cut(s) 544
BseLI CCNNNNNNNGG 4 cut(s) 125, 164, 1215, 1511
BseMI GCAATG 1 cut(s) 618
BseMII CTCAG 5 cut(s) 161, 504, 981, 1073, 1428
BseNI ACTGG 3 cut(s) 1220, 1347, 1516
BseRI GAGGAG 2 cut(s) 848, 851
BseXI GCAGC 3 cut(s) 541, 654, 932
BsgI GTGCAG 1 cut(s) 1460
BshFI GGCC 6 cut(s) 106, 182, 301, 691, 846, 1442
BshNI GGYRCC 2 cut(s) 902, 1304
BsiSI CCGG 3 cut(s) 906, 1308, 1325
BslI CCNNNNNNNGG 4 cut(s) 125, 164, 1215, 1511
BsmAI GTCTC 5 cut(s) 168, 244, 370, 908, 1070
BsmI GAATGC 1 cut(s) 1127
BsnI GGCC 6 cut(s) 106, 182, 301, 691, 846, 1442
Bsp119I TTCGAA 1 cut(s) 24
Bsp143I GATC 5 cut(s) 54, 437, 577, 1068, 1204
Bsp19I CCATGG 1 cut(s) 107
BspANI GGCC 6 cut(s) 106, 182, 301, 691, 846, 1442
BspCNI CTCAG 5 cut(s) 162, 505, 982, 1074, 1429
BspHI TCATGA 2 cut(s) 57, 829
BspLI GGNNCC 3 cut(s) 904, 1250, 1306
BspMI ACCTGC 2 cut(s) 1012, 1482
BspPI GGATC 1 cut(s) 1199
BspT104I TTCGAA 1 cut(s) 24
BspT107I GGYRCC 2 cut(s) 902, 1304
BsrDI GCAATG 1 cut(s) 618
BsrI ACTGG 3 cut(s) 1220, 1347, 1516
BssECI CCNNGG 5 cut(s) 100, 101, 107, 906, 1115
BssMI GATC 5 cut(s) 54, 437, 577, 1068, 1204
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 2 cut(s) 107, 1115
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 2 cut(s) 102, 1427
Bst4CI ACNGT 2 cut(s) 365, 931
Bst6I CTCTTC 3 cut(s) 71, 447, 1195
BstAPI GCANNNNNTGC 1 cut(s) 254
BstBI TTCGAA 1 cut(s) 24
BstC8I GCNNGC 1 cut(s) 609
BstDEI CTNAG 7 cut(s) 170, 443, 513, 990, 1063, 1082, 1437
BstDSI CCRYGG 1 cut(s) 107
BstF5I GGATG 3 cut(s) 690, 770, 1498
BstH2I RGCGCY 1 cut(s) 200
BstHHI GCGC 1 cut(s) 199
BstKTI GATC 5 cut(s) 57, 440, 580, 1071, 1207
BstMAI GTCTC 5 cut(s) 168, 244, 370, 908, 1070
BstMBI GATC 5 cut(s) 54, 437, 577, 1068, 1204
BstMWI GCNNNNNNNGC 2 cut(s) 211, 254
BstNI CCWGG 2 cut(s) 102, 1427
BstNSI RCATGY 1 cut(s) 1333
BstSCI CCNGG 4 cut(s) 100, 905, 1324, 1425
BstV1I GCAGC 3 cut(s) 541, 654, 932
BstV2I GAAGAC 2 cut(s) 807, 1428
BstX2I RGATCY 1 cut(s) 1204
BstXI CCANNNNNNTGG 2 cut(s) 108, 146
BstYI RGATCY 1 cut(s) 1204
BsuRI GGCC 6 cut(s) 106, 182, 301, 691, 846, 1442
BtgI CCRYGG 1 cut(s) 107
BtsCI GGATG 3 cut(s) 690, 770, 1498
BtsIMutI CAGTG 2 cut(s) 1079, 1354
BveI ACCTGC 2 cut(s) 1012, 1482
Cac8I GCNNGC 1 cut(s) 609
CciI TCATGA 2 cut(s) 57, 829
CfoI GCGC 1 cut(s) 199
Cfr13I GGNCC 3 cut(s) 104, 690, 1456
CpoI CGGWCCG 1 cut(s) 1456
CseI GACGC 1 cut(s) 1356
Csp6I GTAC 1 cut(s) 1378
CspCI CAANNNNNGTGG 6 cut(s) 217, 252, 600, 635, 1370, 1405
CspI CGGWCCG 1 cut(s) 1456
CviAII CATG 9 cut(s) 58, 108, 278, 415, 830, 1188, 1330, 1415, 1432
CviQI GTAC 1 cut(s) 1378
DdeI CTNAG 7 cut(s) 170, 443, 513, 990, 1063, 1082, 1437
DpnI GATC 5 cut(s) 56, 439, 579, 1070, 1206
DpnII GATC 5 cut(s) 54, 437, 577, 1068, 1204
DraI TTTAAA 1 cut(s) 822
EaeI YGGCCR 1 cut(s) 180
Eam1104I CTCTTC 3 cut(s) 71, 447, 1195
EarI CTCTTC 3 cut(s) 71, 447, 1195
Eco130I CCWWGG 2 cut(s) 107, 1115
Eco147I AGGCCT 2 cut(s) 301, 1442
Eco47I GGWCC 1 cut(s) 1456
Eco47III AGCGCT 1 cut(s) 198
Eco57I CTGAAG 1 cut(s) 230
EcoRII CCWGG 2 cut(s) 100, 1425
EcoT14I CCWWGG 2 cut(s) 107, 1115
EcoT22I ATGCAT 1 cut(s) 1189
ErhI CCWWGG 2 cut(s) 107, 1115
FaeI CATG 9 cut(s) 61, 111, 281, 418, 833, 1191, 1333, 1418, 1435
FatI CATG 9 cut(s) 57, 107, 277, 414, 829, 1187, 1329, 1414, 1431
FbaI TGATCA 2 cut(s) 54, 1068
Fnu4HI GCNGC 3 cut(s) 555, 668, 921
FokI GGATG 3 cut(s) 697, 757, 1485
Fsp4HI GCNGC 3 cut(s) 555, 668, 921
GlaI GCGC 1 cut(s) 198
GluI GCNGC 3 cut(s) 555, 668, 921
HaeII RGCGCY 1 cut(s) 200
HaeIII GGCC 6 cut(s) 106, 182, 301, 691, 846, 1442
HapII CCGG 3 cut(s) 906, 1308, 1325
HgaI GACGC 1 cut(s) 1356
HhaI GCGC 1 cut(s) 199
Hin1II CATG 9 cut(s) 61, 111, 281, 418, 833, 1191, 1333, 1418, 1435
Hin6I GCGC 1 cut(s) 197
HinP1I GCGC 1 cut(s) 197
HinfI GANTC 5 cut(s) 7, 61, 478, 540, 1483
HpaII CCGG 3 cut(s) 906, 1308, 1325
HphI GGTGA 3 cut(s) 347, 377, 1006
Hpy166II GTNNAC 1 cut(s) 228
Hpy188I TCNGA 6 cut(s) 54, 66, 218, 675, 949, 1460
Hpy188III TCNNGA 8 cut(s) 58, 549, 581, 782, 830, 1165, 1226, 1241
Hpy8I GTNNAC 1 cut(s) 228
Hpy99I CGWCG 1 cut(s) 1372
HpyAV CCTTC 8 cut(s) 27, 31, 49, 610, 973, 1267, 1305, 1455
HpyCH4III ACNGT 2 cut(s) 365, 931
HpyCH4IV ACGT 3 cut(s) 421, 786, 873
HpyF10VI GCNNNNNNNGC 2 cut(s) 211, 254
HpyF3I CTNAG 7 cut(s) 170, 443, 513, 990, 1063, 1082, 1437
HpySE526I ACGT 3 cut(s) 421, 786, 873
Hsp92II CATG 9 cut(s) 61, 111, 281, 418, 833, 1191, 1333, 1418, 1435
HspAI GCGC 1 cut(s) 197
Ksp22I TGATCA 2 cut(s) 54, 1068
Kzo9I GATC 5 cut(s) 54, 437, 577, 1068, 1204
LmnI GCTCC 2 cut(s) 194, 1265
Lsp1109I GCAGC 3 cut(s) 541, 654, 932
LweI GCATC 2 cut(s) 302, 679
MaeII ACGT 3 cut(s) 421, 786, 873
MaeIII GTNAC 2 cut(s) 114, 1107
MalI GATC 5 cut(s) 56, 439, 579, 1070, 1206
MboI GATC 5 cut(s) 54, 437, 577, 1068, 1204
MboII GAAGA 6 cut(s) 88, 461, 464, 812, 1212, 1433
MfeI CAATTG 1 cut(s) 1194
MflI RGATCY 1 cut(s) 1204
MlsI TGGCCA 1 cut(s) 182
MluNI TGGCCA 1 cut(s) 182
Mox20I TGGCCA 1 cut(s) 182
Mph1103I ATGCAT 1 cut(s) 1189
MroXI GAANNNNTTC 1 cut(s) 1293
MscI TGGCCA 1 cut(s) 182
MseI TTAA 5 cut(s) 410, 471, 485, 821, 1041
Msp20I TGGCCA 1 cut(s) 182
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 3 cut(s) 906, 1308, 1325
MspR9I CCNGG 4 cut(s) 102, 907, 1326, 1427
MunI CAATTG 1 cut(s) 1194
Mva1269I GAATGC 1 cut(s) 1127
MvaI CCWGG 2 cut(s) 102, 1427
MwoI GCNNNNNNNGC 2 cut(s) 211, 254
NciI CCSGG 2 cut(s) 907, 1326
NcoI CCATGG 1 cut(s) 107
NdeII GATC 5 cut(s) 54, 437, 577, 1068, 1204
NlaIII CATG 9 cut(s) 61, 111, 281, 418, 833, 1191, 1333, 1418, 1435
NlaIV GGNNCC 3 cut(s) 904, 1250, 1306
NmeAIII GCCGAG 1 cut(s) 1151
NsiI ATGCAT 1 cut(s) 1189
NspI RCATGY 1 cut(s) 1333
NspV TTCGAA 1 cut(s) 24
PagI TCATGA 2 cut(s) 57, 829
PasI CCCWGGG 1 cut(s) 101
PceI AGGCCT 2 cut(s) 301, 1442
PctI GAATGC 1 cut(s) 1127
PdmI GAANNNNTTC 1 cut(s) 1293
PfeI GAWTC 5 cut(s) 7, 61, 478, 540, 1483
PflFI GACNNNGTC 1 cut(s) 872
PflMI CCANNNNNTGG 2 cut(s) 1215, 1511
PkrI GCNGC 3 cut(s) 556, 669, 922
Psp6I CCWGG 2 cut(s) 100, 1425
PspGI CCWGG 2 cut(s) 100, 1425
PspN4I GGNNCC 3 cut(s) 904, 1250, 1306
PspPI GGNCC 3 cut(s) 104, 690, 1456
PsuI RGATCY 1 cut(s) 1204
PsyI GACNNNGTC 1 cut(s) 872
PvuII CAGCTG 1 cut(s) 866
RsaI GTAC 1 cut(s) 1379
RsaNI GTAC 1 cut(s) 1378
Rsr2I CGGWCCG 1 cut(s) 1456
RsrII CGGWCCG 1 cut(s) 1456
SaqAI TTAA 5 cut(s) 410, 471, 485, 821, 1041
SatI GCNGC 3 cut(s) 555, 668, 921
Sau3AI GATC 5 cut(s) 54, 437, 577, 1068, 1204
Sau96I GGNCC 3 cut(s) 104, 690, 1456
ScrFI CCNGG 4 cut(s) 102, 907, 1326, 1427
SfaNI GCATC 2 cut(s) 302, 679
SfuI TTCGAA 1 cut(s) 24
SinI GGWCC 1 cut(s) 1456
SmlI CTYRAG 2 cut(s) 401, 698
SmoI CTYRAG 2 cut(s) 401, 698
SseBI AGGCCT 2 cut(s) 301, 1442
SspI AATATT 1 cut(s) 1005
StuI AGGCCT 2 cut(s) 301, 1442
StyD4I CCNGG 4 cut(s) 100, 905, 1324, 1425
StyI CCWWGG 2 cut(s) 107, 1115
TaaI ACNGT 2 cut(s) 365, 931
TaiI ACGT 3 cut(s) 424, 789, 876
TaqI TCGA 3 cut(s) 24, 436, 481
TaqII GACCGA 1 cut(s) 1444
TfiI GAWTC 5 cut(s) 7, 61, 478, 540, 1483
Tru1I TTAA 5 cut(s) 410, 471, 485, 821, 1041
Tru9I TTAA 5 cut(s) 410, 471, 485, 821, 1041
TscAI CASTG 2 cut(s) 1086, 1354
TseI GCWGC 3 cut(s) 554, 667, 920
TspDTI ATGAA 9 cut(s) 284, 431, 580, 629, 818, 1044, 1167, 1424, 1434
TspGWI ACGGA 4 cut(s) 180, 207, 400, 552
TspRI CASTG 2 cut(s) 1086, 1354
Tth111I GACNNNGTC 1 cut(s) 872
Van91I CCANNNNNTGG 2 cut(s) 1215, 1511
VpaK11BI GGWCC 1 cut(s) 1456
XapI RAATTY 7 cut(s) 91, 390, 519, 587, 824, 851, 1289
XceI RCATGY 1 cut(s) 1333
XmnI GAANNNNTTC 1 cut(s) 1293
Zsp2I ATGCAT 1 cut(s) 1189
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.