Prupe.4G238000_v2.0.a1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000132
Physical Location & Seq
Reverse (-)
15539962 .. 15543158
3197 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G238000.1

Sequence Viewer

Length: 1428 bp
ATGGAGATTCAGTGCCCTTCCTTCCATGTCCTGTTAGCCTTCTTGCTCTTTATGATCATGGTACTGAAAATAGGGAAGATCAGAGGCAAAACCAAGTGCTCAGCCTCAAATCTACCGCCAGGGCCATGGAAGCTACCCGTTATAGGAAACCTGCACCAGCTCGCTGGCTCTCTACCACATCAAAGACTAAGAGACTTGGCCAAGAAATACGGACCGCTTATGCACCTAAAGCTTGGAGAAGTTTCCACCGTAGTAGTTTCATCAGCAGAGTTTGCCAAAGAGGTGATGAAAACCCATGATCTTATCTTTGCATCCAGGCCCCATGTCCTTGCCCCAAGGATCTTGTCTTACGATTTTACAAGCATTGTCTTTGCACCATATGGTGAATACTGGAGAAAATTAAGAAAAATTTGCACTCTAGAGCTTTTAAGTGCAAAACGTGTTCGATCTTACCGACCTATTAGGGAAGAAGAGGTACGGAAGCTCATTAAATTGATTGCCTCAAGAGCAGGATCACCTATCAATCTTACACAGGAAATTTACTCATCGACATTTACCATCACTTCGCGAGCAGCCTTTGGTAAAAAGAACAGGGATCAAGAAAAATTCATATACATTGTGAAGGAAGTTGCAAAGGCAGCATCTGGCTTCGCTCTTGCAGATGTTTTTCCTTCTGTCAGTTTGCTTCATCTCTTAAGTGGAATGAGGCATAAAATTGAGAGGCTGCATAAAGAAGCTGACAGGATAATGGGAAACATCATCAAAGAACATCAAAGGGATATGGTCACTACAAAAAGCAGCGAGGGTGAAGCAGAGGAAGACCTGGTAGATGTTCTCCTTAAATTTCATGAGCATGGAAATGAGCGTGAGTTTTCCCTAACTACTGAGAACATCAAAGCAGTTATCTTTGATATTTTTGCTGCTGGGAGTGAGACATCATCTACAGCTGTAGATTGGGCAATAGCAGAAATGATAAAAAATCCAAGAGTAATGAACATGGCACAGAATGAGGTGAGGGAAGTGTTTAATAGGAAAGGACAGGTAGATGAAACATGCATTAGAGAGATGAAATATTTAAACTTAGTTATAAAGGAGACACTGAGGTTACACCCCCCGGGTCCCCTGTTAGTTCCAAGAGAATGCGGAGAGAAATGTGAGATTGATGGACATGAAATACCTGTGAAATCCAAGGTAATTGTGAATGCATGGGCAATTGGTAGAGATCCCAATTACTGGAATGAGCCTGAGAGCTTTAATCCCAATAGGTTCCTTGATAACTCGATTGACTACAAGGGAACAAACTTTGAATATATCCCATTTGGTGCTGGAAGGAGAATGTGCCCTGGCGTGTCATTTGGTCTGGCCAACGTTGAGCTCCCACTTGCATTGTTGTTATACCATTTTGATTGGAAACTCCCAATGGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

476

Amino Acids

53.93

Weight (kDa)

9.09

Isoelectric Point (pI)

29.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1088
Acc36I ACCTGC 1 cut(s) 159
AccB7I CCANNNNNTGG 1 cut(s) 1233
AccII CGCG 1 cut(s) 568
AciI CCGC 3 cut(s) 116, 215, 1143
AclI AACGTT 1 cut(s) 1368
AclWI GGATC 4 cut(s) 347, 520, 603, 1217
AcoI YGGCCR 2 cut(s) 198, 1362
AcsI RAATTY 4 cut(s) 408, 537, 605, 842
AfaI GTAC 2 cut(s) 63, 477
AfiI CCNNNNNNNGG 2 cut(s) 143, 1233
AflII CTTAAG 1 cut(s) 694
AflIII ACRYGT 1 cut(s) 439
AgsI TTSAA 1 cut(s) 1307
AjnI CCWGG 4 cut(s) 118, 314, 822, 1342
AluBI AGCT 9 cut(s) 133, 160, 232, 424, 484, 737, 947, 1251, 1375
AluI AGCT 9 cut(s) 133, 160, 232, 424, 484, 737, 947, 1251, 1375
Alw21I GWGCWC 2 cut(s) 101, 1377
Alw26I GTCTC 3 cut(s) 186, 926, 1088
AlwI GGATC 4 cut(s) 347, 520, 603, 1217
AlwNI CAGNNNCTG 1 cut(s) 644
Ama87I CYCGRG 1 cut(s) 1114
AoxI GGCC 4 cut(s) 122, 198, 317, 1362
ApeKI GCWGC 5 cut(s) 572, 638, 724, 798, 920
ApoI RAATTY 4 cut(s) 408, 537, 605, 842
AspS9I GGNCC 4 cut(s) 122, 212, 318, 1118
AsuC2I CCSGG 2 cut(s) 1115, 1116
AsuHPI GGTGA 5 cut(s) 295, 395, 507, 818, 1024
AvaI CYCGRG 1 cut(s) 1114
AvaII GGWCC 2 cut(s) 212, 1118
BaeGI GKGCMC 2 cut(s) 17, 1343
BalI TGGCCA 2 cut(s) 200, 1364
BanII GRGCYC 1 cut(s) 1377
BarI GAAGNNNNNNTAC 2 cut(s) 459, 491
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 2 cut(s) 101, 1377
BbvI GCAGC 5 cut(s) 584, 650, 711, 810, 907
BccI CCATC 2 cut(s) 566, 1157
BciT130I CCWGG 4 cut(s) 120, 316, 824, 1344
BclI TGATCA 1 cut(s) 54
BcnI CCSGG 2 cut(s) 1115, 1116
BcoDI GTCTC 3 cut(s) 186, 926, 1088
BfaI CTAG 1 cut(s) 419
BfmI CTRYAG 2 cut(s) 942, 948
BfrI CTTAAG 1 cut(s) 694
BfuAI ACCTGC 1 cut(s) 159
BisI GCNGC 5 cut(s) 573, 639, 725, 799, 921
BlpI GCTNAGC 1 cut(s) 100
BlsI GCNGC 5 cut(s) 574, 640, 726, 800, 922
Bme1390I CCNGG 6 cut(s) 120, 316, 824, 1115, 1116, 1344
Bme18I GGWCC 2 cut(s) 212, 1118
BmeT110I CYCGRG 1 cut(s) 1114
BmgT120I GGNCC 4 cut(s) 122, 212, 318, 1118
BmiI GGNNCC 4 cut(s) 320, 1119, 1120, 1268
BmrFI CCNGG 6 cut(s) 120, 316, 824, 1115, 1116, 1344
BmsI GCATC 2 cut(s) 320, 650
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 1 cut(s) 412
Bpu1102I GCTNAGC 1 cut(s) 100
BpuEI CTTGAG 1 cut(s) 487
BpuMI CCSGG 2 cut(s) 1115, 1116
BsaJI CCNNGG 7 cut(s) 119, 125, 335, 1113, 1114, 1188, 1342
BsaXI ACNNNNNCTCC 1 cut(s) 26
Bsc4I CCNNNNNNNGG 2 cut(s) 143, 1233
Bse1I ACTGG 2 cut(s) 395, 1238
BseBI CCWGG 4 cut(s) 120, 316, 824, 1344
BseDI CCNNGG 7 cut(s) 119, 125, 335, 1113, 1114, 1188, 1342
BseGI GGATG 1 cut(s) 311
BseLI CCNNNNNNNGG 2 cut(s) 143, 1233
BseMII CTCAG 4 cut(s) 114, 876, 1091, 1236
BseNI ACTGG 2 cut(s) 395, 1238
BseSI GKGCMC 2 cut(s) 17, 1343
BseXI GCAGC 5 cut(s) 584, 650, 711, 810, 907
BseYI CCCAGC 1 cut(s) 923
BsgI GTGCAG 1 cut(s) 137
Bsh1236I CGCG 1 cut(s) 568
BshFI GGCC 4 cut(s) 124, 200, 319, 1364
BsiHKAI GWGCWC 2 cut(s) 101, 1377
BsiHKCI CYCGRG 1 cut(s) 1114
BsiSI CCGG 1 cut(s) 1115
BslFI GGGAC 1 cut(s) 1104
BslI CCNNNNNNNGG 2 cut(s) 143, 1233
BsmAI GTCTC 3 cut(s) 186, 926, 1088
BsmFI GGGAC 1 cut(s) 1104
BsmI GAATGC 2 cut(s) 1145, 1207
BsnI GGCC 4 cut(s) 124, 200, 319, 1364
BsoBI CYCGRG 1 cut(s) 1114
Bsp1286I GDGCHC 4 cut(s) 17, 101, 1343, 1377
Bsp143I GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
Bsp1720I GCTNAGC 1 cut(s) 100
Bsp19I CCATGG 1 cut(s) 125
Bsp68I TCGCGA 1 cut(s) 568
BspACI CCGC 3 cut(s) 116, 215, 1143
BspANI GGCC 4 cut(s) 124, 200, 319, 1364
BspCNI CTCAG 4 cut(s) 113, 877, 1092, 1237
BspFNI CGCG 1 cut(s) 568
BspHI TCATGA 1 cut(s) 847
BspLI GGNNCC 4 cut(s) 320, 1119, 1120, 1268
BspMI ACCTGC 1 cut(s) 159
BspPI GGATC 4 cut(s) 347, 520, 603, 1217
BspTI CTTAAG 1 cut(s) 694
BsrI ACTGG 2 cut(s) 395, 1238
BssECI CCNNGG 7 cut(s) 119, 125, 335, 1113, 1114, 1188, 1342
BssMI GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
BssT1I CCWWGG 3 cut(s) 125, 335, 1188
Bst2UI CCWGG 4 cut(s) 120, 316, 824, 1344
Bst4CI ACNGT 1 cut(s) 250
Bst6I CTCTTC 1 cut(s) 465
BstAFI CTTAAG 1 cut(s) 694
BstAPI GCANNNNNTGC 1 cut(s) 272
BstC8I GCNNGC 3 cut(s) 162, 166, 570
BstDEI CTNAG 6 cut(s) 100, 188, 885, 1081, 1100, 1245
BstDSI CCRYGG 1 cut(s) 125
BstF5I GGATG 1 cut(s) 311
BstFNI CGCG 1 cut(s) 568
BstKTI GATC 8 cut(s) 57, 81, 301, 342, 449, 515, 598, 1225
BstMAI GTCTC 3 cut(s) 186, 926, 1088
BstMBI GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
BstMWI GCNNNNNNNGC 5 cut(s) 130, 229, 272, 506, 638
BstNI CCWGG 4 cut(s) 120, 316, 824, 1344
BstNSI RCATGY 1 cut(s) 1056
BstSCI CCNGG 6 cut(s) 118, 314, 822, 1113, 1114, 1342
BstSFI CTRYAG 2 cut(s) 942, 948
BstSLI GKGCMC 2 cut(s) 17, 1343
BstUI CGCG 1 cut(s) 568
BstV1I GCAGC 5 cut(s) 584, 650, 711, 810, 907
BstV2I GAAGAC 1 cut(s) 825
BstX2I RGATCY 2 cut(s) 339, 1222
BstXI CCANNNNNNTGG 2 cut(s) 126, 164
BstYI RGATCY 2 cut(s) 339, 1222
BsuRI GGCC 4 cut(s) 124, 200, 319, 1364
BtgI CCRYGG 1 cut(s) 125
BtsCI GGATG 1 cut(s) 311
BtsIMutI CAGTG 2 cut(s) 17, 1097
BtuMI TCGCGA 1 cut(s) 568
BveI ACCTGC 1 cut(s) 159
Cac8I GCNNGC 3 cut(s) 162, 166, 570
CaiI CAGNNNCTG 1 cut(s) 644
CciI TCATGA 1 cut(s) 847
Cfr13I GGNCC 4 cut(s) 122, 212, 318, 1118
Cfr9I CCCGGG 1 cut(s) 1114
CpoI CGGWCCG 1 cut(s) 212
CsiI ACCWGGT 1 cut(s) 822
Csp6I GTAC 2 cut(s) 62, 476
CspCI CAANNNNNGTGG 2 cut(s) 1368, 1403
CspI CGGWCCG 1 cut(s) 212
CviQI GTAC 2 cut(s) 62, 476
DdeI CTNAG 6 cut(s) 100, 188, 885, 1081, 1100, 1245
DpnI GATC 8 cut(s) 56, 80, 300, 341, 448, 514, 597, 1224
DpnII GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
DraI TTTAAA 1 cut(s) 1077
EaeI YGGCCR 2 cut(s) 198, 1362
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
Ecl136II GAGCTC 1 cut(s) 1375
Eco130I CCWWGG 3 cut(s) 125, 335, 1188
Eco24I GRGCYC 1 cut(s) 1377
Eco47I GGWCC 2 cut(s) 212, 1118
Eco53kI GAGCTC 1 cut(s) 1375
Eco88I CYCGRG 1 cut(s) 1114
EcoICRI GAGCTC 1 cut(s) 1375
EcoO109I RGGNCCY 2 cut(s) 318, 1118
EcoRII CCWGG 4 cut(s) 118, 314, 822, 1342
EcoT14I CCWWGG 3 cut(s) 125, 335, 1188
EcoT22I ATGCAT 2 cut(s) 1058, 1207
EcoT38I GRGCYC 1 cut(s) 1377
ErhI CCWWGG 3 cut(s) 125, 335, 1188
FaqI GGGAC 1 cut(s) 1104
FauNDI CATATG 1 cut(s) 379
FbaI TGATCA 1 cut(s) 54
Fnu4HI GCNGC 5 cut(s) 573, 639, 725, 799, 921
FokI GGATG 1 cut(s) 298
FriOI GRGCYC 1 cut(s) 1377
Fsp4HI GCNGC 5 cut(s) 573, 639, 725, 799, 921
FspBI CTAG 1 cut(s) 419
GluI GCNGC 5 cut(s) 573, 639, 725, 799, 921
GsaI CCCAGC 1 cut(s) 927
GsuI CTGGAG 1 cut(s) 412
HaeIII GGCC 4 cut(s) 124, 200, 319, 1364
HapII CCGG 1 cut(s) 1115
HindIII AAGCTT 1 cut(s) 230
HinfI GANTC 1 cut(s) 7
HpaII CCGG 1 cut(s) 1115
HphI GGTGA 5 cut(s) 295, 395, 507, 818, 1024
Hpy188I TCNGA 1 cut(s) 83
Hpy188III TCNNGA 5 cut(s) 419, 504, 567, 599, 848
HpyAV CCTTC 6 cut(s) 27, 31, 49, 616, 681, 1323
HpyCH4III ACNGT 1 cut(s) 250
HpyCH4IV ACGT 2 cut(s) 439, 1368
HpyF10VI GCNNNNNNNGC 5 cut(s) 130, 229, 272, 506, 638
HpyF3I CTNAG 6 cut(s) 100, 188, 885, 1081, 1100, 1245
HpySE526I ACGT 2 cut(s) 439, 1368
KflI GGGWCCC 1 cut(s) 1118
Ksp22I TGATCA 1 cut(s) 54
Kzo9I GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
LmnI GCTCC 1 cut(s) 1380
Lsp1109I GCAGC 5 cut(s) 584, 650, 711, 810, 907
LweI GCATC 2 cut(s) 320, 650
MabI ACCWGGT 1 cut(s) 822
MaeI CTAG 1 cut(s) 419
MaeII ACGT 2 cut(s) 439, 1368
MaeIII GTNAC 2 cut(s) 784, 1104
MalI GATC 8 cut(s) 56, 80, 300, 341, 448, 514, 597, 1224
MboI GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
MboII GAAGA 4 cut(s) 88, 479, 482, 830
MfeI CAATTG 1 cut(s) 1212
MflI RGATCY 2 cut(s) 339, 1222
MhlI GDGCHC 4 cut(s) 17, 101, 1343, 1377
MlsI TGGCCA 2 cut(s) 200, 1364
MluNI TGGCCA 2 cut(s) 200, 1364
Mox20I TGGCCA 2 cut(s) 200, 1364
Mph1103I ATGCAT 2 cut(s) 1058, 1207
MscI TGGCCA 2 cut(s) 200, 1364
MseI TTAA 8 cut(s) 401, 428, 489, 695, 840, 1026, 1076, 1254
MslI CAYNNNNRTG 2 cut(s) 852, 858
Msp20I TGGCCA 2 cut(s) 200, 1364
MspA1I CMGCKG 1 cut(s) 947
MspCI CTTAAG 1 cut(s) 694
MspI CCGG 1 cut(s) 1115
MspR9I CCNGG 6 cut(s) 120, 316, 824, 1115, 1116, 1344
MunI CAATTG 1 cut(s) 1212
Mva1269I GAATGC 2 cut(s) 1145, 1207
MvaI CCWGG 4 cut(s) 120, 316, 824, 1344
MvnI CGCG 1 cut(s) 568
MwoI GCNNNNNNNGC 5 cut(s) 130, 229, 272, 506, 638
NciI CCSGG 2 cut(s) 1115, 1116
NcoI CCATGG 1 cut(s) 125
NdeI CATATG 1 cut(s) 379
NdeII GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
NlaIV GGNNCC 4 cut(s) 320, 1119, 1120, 1268
NmuCI GTSAC 1 cut(s) 784
NruI TCGCGA 1 cut(s) 568
NsiI ATGCAT 2 cut(s) 1058, 1207
NspI RCATGY 1 cut(s) 1056
PagI TCATGA 1 cut(s) 847
PcsI WCGNNNNNNNCGW 1 cut(s) 451
PctI GAATGC 2 cut(s) 1145, 1207
PfeI GAWTC 1 cut(s) 7
PflMI CCANNNNNTGG 1 cut(s) 1233
PkrI GCNGC 5 cut(s) 574, 640, 726, 800, 922
PpuMI RGGWCCY 1 cut(s) 1118
PsiI TTATAA 1 cut(s) 1088
Psp124BI GAGCTC 1 cut(s) 1377
Psp1406I AACGTT 1 cut(s) 1368
Psp5II RGGWCCY 1 cut(s) 1118
Psp6I CCWGG 4 cut(s) 118, 314, 822, 1342
PspFI CCCAGC 1 cut(s) 923
PspGI CCWGG 4 cut(s) 118, 314, 822, 1342
PspN4I GGNNCC 4 cut(s) 320, 1119, 1120, 1268
PspPI GGNCC 4 cut(s) 122, 212, 318, 1118
PspPPI RGGWCCY 1 cut(s) 1118
PstNI CAGNNNCTG 1 cut(s) 644
PsuI RGATCY 2 cut(s) 339, 1222
PvuII CAGCTG 1 cut(s) 947
RruI TCGCGA 1 cut(s) 568
RsaI GTAC 2 cut(s) 63, 477
RsaNI GTAC 2 cut(s) 62, 476
RseI CAYNNNNRTG 2 cut(s) 852, 858
Rsr2I CGGWCCG 1 cut(s) 212
RsrII CGGWCCG 1 cut(s) 212
SacI GAGCTC 1 cut(s) 1377
SaqAI TTAA 8 cut(s) 401, 428, 489, 695, 840, 1026, 1076, 1254
SatI GCNGC 5 cut(s) 573, 639, 725, 799, 921
Sau3AI GATC 8 cut(s) 54, 78, 298, 339, 446, 512, 595, 1222
Sau96I GGNCC 4 cut(s) 122, 212, 318, 1118
ScrFI CCNGG 6 cut(s) 120, 316, 824, 1115, 1116, 1344
SduI GDGCHC 4 cut(s) 17, 101, 1343, 1377
SexAI ACCWGGT 1 cut(s) 822
SfaNI GCATC 2 cut(s) 320, 650
SfcI CTRYAG 2 cut(s) 942, 948
SinI GGWCC 2 cut(s) 212, 1118
SmaI CCCGGG 1 cut(s) 1116
SmiMI CAYNNNNRTG 2 cut(s) 852, 858
SmlI CTYRAG 2 cut(s) 502, 694
SmoI CTYRAG 2 cut(s) 502, 694
SsiI CCGC 3 cut(s) 116, 215, 1143
SspI AATATT 1 cut(s) 1073
SspMI CTAG 1 cut(s) 419
SstI GAGCTC 1 cut(s) 1377
StyD4I CCNGG 6 cut(s) 118, 314, 822, 1113, 1114, 1342
StyI CCWWGG 3 cut(s) 125, 335, 1188
TaaI ACNGT 1 cut(s) 250
TaiI ACGT 2 cut(s) 442, 1371
TaqI TCGA 3 cut(s) 445, 548, 1280
TfiI GAWTC 1 cut(s) 7
Tru1I TTAA 8 cut(s) 401, 428, 489, 695, 840, 1026, 1076, 1254
Tru9I TTAA 8 cut(s) 401, 428, 489, 695, 840, 1026, 1076, 1254
TscAI CASTG 2 cut(s) 17, 1104
TseFI GTSAC 1 cut(s) 784
TseI GCWGC 5 cut(s) 572, 638, 724, 798, 920
Tsp45I GTSAC 1 cut(s) 784
TspDTI ATGAA 9 cut(s) 249, 302, 598, 677, 836, 1007, 1062, 1082, 1185
TspGWI ACGGA 2 cut(s) 225, 493
TspMI CCCGGG 1 cut(s) 1114
TspRI CASTG 2 cut(s) 17, 1104
Van91I CCANNNNNTGG 1 cut(s) 1233
Vha464I CTTAAG 1 cut(s) 694
VpaK11BI GGWCC 2 cut(s) 212, 1118
XapI RAATTY 4 cut(s) 408, 537, 605, 842
XbaI TCTAGA 1 cut(s) 418
XceI RCATGY 1 cut(s) 1056
XmaI CCCGGG 1 cut(s) 1114
XspI CTAG 1 cut(s) 419
Zsp2I ATGCAT 2 cut(s) 1058, 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.