Rmu_sc0009324.1_g000005

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009324.1
Physical Location & Seq
Forward (+)
19840 .. 20175
336 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009324.1_g000005.1.cds

Sequence Viewer

Length: 336 bp
atgcttctttcttttcgagatttttggttgaaattggctaaaatctcgtcctacatcattcaacctgagaggttccaaggtagtggttccattgattatagagggtccaatttggaatttattccatttggagctgggaaaagaatatgtccaggcataacatttggaactgcagcagtggaacttgcacttgctcaactgctatatcactttgactggagactccccagtgggactgggaccaaacttgaacaacttgacatgacagaatcagcgggatggaatactaagaggagggatgatttgtatgttgtggccattccttttctaccctaa
Functional Annotation

Protein Analysis

111

Amino Acids

12.53

Weight (kDa)

7.87

Isoelectric Point (pI)

34.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 275
AcoI YGGCCR 1 cut(s) 315
AcsI RAATTY 1 cut(s) 116
AgsI TTSAA 3 cut(s) 31, 62, 251
AjnI CCWGG 1 cut(s) 151
AluBI AGCT 1 cut(s) 134
AluI AGCT 1 cut(s) 134
Alw26I GTCTC 1 cut(s) 214
AoxI GGCC 1 cut(s) 315
ApeKI GCWGC 1 cut(s) 173
ApoI RAATTY 1 cut(s) 116
Asp700I GAANNNNTTC 1 cut(s) 120
AspS9I GGNCC 2 cut(s) 105, 240
AvaII GGWCC 2 cut(s) 105, 240
BalI TGGCCA 1 cut(s) 317
BbvI GCAGC 1 cut(s) 185
BccI CCATC 1 cut(s) 273
BciT130I CCWGG 1 cut(s) 153
BcoDI GTCTC 1 cut(s) 214
BfmI CTRYAG 1 cut(s) 171
BisI GCNGC 1 cut(s) 174
BlsI GCNGC 1 cut(s) 175
Bme1390I CCNGG 1 cut(s) 153
Bme18I GGWCC 2 cut(s) 105, 240
BmgT120I GGNCC 2 cut(s) 105, 240
BmiI GGNNCC 4 cut(s) 74, 88, 106, 241
BmrFI CCNGG 1 cut(s) 153
BmrI ACTGGG 2 cut(s) 222, 246
BmuI ACTGGG 2 cut(s) 222, 246
BpmI CTGGAG 1 cut(s) 238
BsaJI CCNNGG 1 cut(s) 76
Bse1I ACTGG 3 cut(s) 221, 228, 241
BseBI CCWGG 1 cut(s) 153
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 2 cut(s) 284, 304
BseMII CTCAG 1 cut(s) 57
BseNI ACTGG 3 cut(s) 221, 228, 241
BseRI GAGGAG 1 cut(s) 307
BseXI GCAGC 1 cut(s) 185
BseYI CCCAGC 1 cut(s) 134
BshFI GGCC 1 cut(s) 317
BslFI GGGAC 2 cut(s) 247, 253
BsmAI GTCTC 1 cut(s) 214
BsmFI GGGAC 2 cut(s) 247, 253
BsnI GGCC 1 cut(s) 317
BspACI CCGC 1 cut(s) 275
BspANI GGCC 1 cut(s) 317
BspCNI CTCAG 1 cut(s) 58
BspLI GGNNCC 4 cut(s) 74, 88, 106, 241
BspMAI CTGCAG 1 cut(s) 175
BsrI ACTGG 3 cut(s) 221, 228, 241
BssECI CCNNGG 1 cut(s) 76
BssT1I CCWWGG 1 cut(s) 76
Bst2UI CCWGG 1 cut(s) 153
BstDEI CTNAG 2 cut(s) 66, 288
BstF5I GGATG 2 cut(s) 284, 304
BstMAI GTCTC 1 cut(s) 214
BstNI CCWGG 1 cut(s) 153
BstSCI CCNGG 1 cut(s) 151
BstSFI CTRYAG 1 cut(s) 171
BstV1I GCAGC 1 cut(s) 185
BstXI CCANNNNNNTGG 1 cut(s) 83
BsuRI GGCC 1 cut(s) 317
BtsCI GGATG 2 cut(s) 284, 304
BtsI GCAGTG 1 cut(s) 183
BtsIMutI CAGTG 2 cut(s) 183, 235
Cfr13I GGNCC 2 cut(s) 105, 240
CviAII CATG 1 cut(s) 262
CviJI RGCY 3 cut(s) 38, 134, 317
CviKI_1 RGCY 3 cut(s) 38, 134, 317
DdeI CTNAG 2 cut(s) 66, 288
EaeI YGGCCR 1 cut(s) 315
Eco130I CCWWGG 1 cut(s) 76
Eco47I GGWCC 2 cut(s) 105, 240
EcoRII CCWGG 1 cut(s) 151
EcoT14I CCWWGG 1 cut(s) 76
ErhI CCWWGG 1 cut(s) 76
FaeI CATG 1 cut(s) 265
FaiI YATR 6 cut(s) 99, 148, 158, 205, 263, 309
FaqI GGGAC 2 cut(s) 247, 253
FatI CATG 1 cut(s) 261
FauI CCCGC 1 cut(s) 268
Fnu4HI GCNGC 1 cut(s) 174
FokI GGATG 2 cut(s) 291, 311
Fsp4HI GCNGC 1 cut(s) 174
GluI GCNGC 1 cut(s) 174
GsaI CCCAGC 1 cut(s) 138
GsuI CTGGAG 1 cut(s) 238
HaeIII GGCC 1 cut(s) 317
Hin1II CATG 1 cut(s) 265
HinfI GANTC 2 cut(s) 222, 269
Hpy188III TCNNGA 1 cut(s) 17
HpyCH4V TGCA 2 cut(s) 173, 188
HpyF3I CTNAG 2 cut(s) 66, 288
Hsp92II CATG 1 cut(s) 265
LmnI GCTCC 1 cut(s) 131
LpnPI CCDG 7 cut(s) 78, 120, 138, 165, 202, 222, 241
Lsp1109I GCAGC 1 cut(s) 185
MlsI TGGCCA 1 cut(s) 317
MluCI AATT 3 cut(s) 32, 109, 116
MluNI TGGCCA 1 cut(s) 317
MlyI GAGTC 1 cut(s) 216
MnlI CCTC 4 cut(s) 63, 95, 285, 288
Mox20I TGGCCA 1 cut(s) 317
MroXI GAANNNNTTC 1 cut(s) 120
MscI TGGCCA 1 cut(s) 317
Msp20I TGGCCA 1 cut(s) 317
MspA1I CMGCKG 1 cut(s) 275
MspR9I CCNGG 1 cut(s) 153
MvaI CCWGG 1 cut(s) 153
NlaIII CATG 1 cut(s) 265
NlaIV GGNNCC 4 cut(s) 74, 88, 106, 241
PdmI GAANNNNTTC 1 cut(s) 120
PfeI GAWTC 1 cut(s) 269
PkrI GCNGC 1 cut(s) 175
PleI GAGTC 1 cut(s) 216
PpsI GAGTC 1 cut(s) 216
Psp6I CCWGG 1 cut(s) 151
PspFI CCCAGC 1 cut(s) 134
PspGI CCWGG 1 cut(s) 151
PspN4I GGNNCC 4 cut(s) 74, 88, 106, 241
PspPI GGNCC 2 cut(s) 105, 240
PstI CTGCAG 1 cut(s) 175
SatI GCNGC 1 cut(s) 174
Sau96I GGNCC 2 cut(s) 105, 240
SchI GAGTC 1 cut(s) 216
ScrFI CCNGG 1 cut(s) 153
SetI ASST 4 cut(s) 67, 74, 82, 136
SfcI CTRYAG 1 cut(s) 171
SinI GGWCC 2 cut(s) 105, 240
Sse9I AATT 3 cut(s) 32, 109, 116
SsiI CCGC 1 cut(s) 275
StyD4I CCNGG 1 cut(s) 151
StyI CCWWGG 1 cut(s) 76
TaqI TCGA 1 cut(s) 16
TasI AATT 3 cut(s) 32, 109, 116
TfiI GAWTC 1 cut(s) 269
TscAI CASTG 2 cut(s) 183, 235
TseI GCWGC 1 cut(s) 173
TspRI CASTG 2 cut(s) 183, 235
VpaK11BI GGWCC 2 cut(s) 105, 240
XapI RAATTY 1 cut(s) 116
XmnI GAANNNNTTC 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.