MD00G1153200.v1.1

iron ion binding

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
Physical Location & Seq
Reverse (-)
33611008 .. 33611346
339 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1153200.v1.1.491

Sequence Viewer

Length: 339 bp
ATGGGCAATAGGAAGAGACCCAGAGATATATGGGGGGCAGATGCTGAGTCTTTTAAGCCAGAGAGATTTCATGGTTCTTCTGTTGACTTTAAGGGCTTTGACTTTGAGTTCACTCCATTTGGGGCTGGCAGAAGAATGTGTCCAGGCATGTCATTTGGTGTTACCATGGTTGAACTTGCTCTTGCTGAATTGCTCTACCGCCTCGATTGGAAACTGGCGAATGGGATGAATCCAGACGAACTTGACATGACAGAGAGCTTTGGAATGGCCTGTAAGAGAGAGAATACGTTGTACCTAATTGCCACCCCACATTTTACTTCAGTCAATGAGTCAGAGTGA

Protein Analysis

113

Amino Acids

12.72

Weight (kDa)

5.19

Isoelectric Point (pI)

28.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 9 - 90 6e-17 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 199
AcuI CTGAAG 1 cut(s) 303
AfaI GTAC 1 cut(s) 293
AgsI TTSAA 1 cut(s) 173
AjnI CCWGG 1 cut(s) 142
AluBI AGCT 1 cut(s) 258
AluI AGCT 1 cut(s) 258
Alw26I GTCTC 1 cut(s) 10
AlwNI CAGNNNCTG 1 cut(s) 44
AoxI GGCC 1 cut(s) 267
BciT130I CCWGG 1 cut(s) 144
BcoDI GTCTC 1 cut(s) 10
Bme1390I CCNGG 1 cut(s) 144
BmrFI CCNGG 1 cut(s) 144
BmsI GCATC 1 cut(s) 31
BsaI GGTCTC 1 cut(s) 10
BsaJI CCNNGG 1 cut(s) 165
Bse1I ACTGG 1 cut(s) 219
BseBI CCWGG 1 cut(s) 144
BseDI CCNNGG 1 cut(s) 165
BseGI GGATG 1 cut(s) 231
BseMII CTCAG 1 cut(s) 36
BseNI ACTGG 1 cut(s) 219
BshFI GGCC 1 cut(s) 269
BsmAI GTCTC 1 cut(s) 10
BsnI GGCC 1 cut(s) 269
Bso31I GGTCTC 1 cut(s) 10
Bsp19I CCATGG 1 cut(s) 165
BspACI CCGC 1 cut(s) 199
BspANI GGCC 1 cut(s) 269
BspCNI CTCAG 1 cut(s) 37
BspTNI GGTCTC 1 cut(s) 10
BsrI ACTGG 1 cut(s) 219
BssECI CCNNGG 1 cut(s) 165
BssT1I CCWWGG 1 cut(s) 165
Bst2UI CCWGG 1 cut(s) 144
Bst6I CTCTTC 1 cut(s) 8
BstC8I GCNNGC 1 cut(s) 127
BstDEI CTNAG 1 cut(s) 45
BstDSI CCRYGG 1 cut(s) 165
BstF5I GGATG 1 cut(s) 231
BstMAI GTCTC 1 cut(s) 10
BstNI CCWGG 1 cut(s) 144
BstNSI RCATGY 1 cut(s) 151
BstSCI CCNGG 1 cut(s) 142
BsuRI GGCC 1 cut(s) 269
BtgI CCRYGG 1 cut(s) 165
BtsCI GGATG 1 cut(s) 231
Cac8I GCNNGC 1 cut(s) 127
CaiI CAGNNNCTG 1 cut(s) 44
Csp6I GTAC 1 cut(s) 292
CviAII CATG 4 cut(s) 71, 148, 166, 247
CviJI RGCY 5 cut(s) 58, 96, 125, 258, 269
CviKI_1 RGCY 5 cut(s) 58, 96, 125, 258, 269
CviQI GTAC 1 cut(s) 292
DdeI CTNAG 1 cut(s) 45
Eam1104I CTCTTC 1 cut(s) 8
EarI CTCTTC 1 cut(s) 8
Eco130I CCWWGG 1 cut(s) 165
Eco31I GGTCTC 1 cut(s) 10
Eco57I CTGAAG 1 cut(s) 303
EcoRII CCWGG 1 cut(s) 142
EcoT14I CCWWGG 1 cut(s) 165
ErhI CCWWGG 1 cut(s) 165
FaeI CATG 4 cut(s) 74, 151, 169, 250
FaiI YATR 6 cut(s) 29, 31, 72, 149, 167, 248
FatI CATG 4 cut(s) 70, 147, 165, 246
FokI GGATG 1 cut(s) 238
HaeIII GGCC 1 cut(s) 269
Hin1II CATG 4 cut(s) 74, 151, 169, 250
HincII GTYRAC 1 cut(s) 85
HindII GTYRAC 1 cut(s) 85
HinfI GANTC 3 cut(s) 47, 229, 329
Hpy166II GTNNAC 2 cut(s) 85, 111
Hpy188I TCNGA 1 cut(s) 334
Hpy188III TCNNGA 1 cut(s) 233
Hpy8I GTNNAC 2 cut(s) 85, 111
HpyCH4IV ACGT 1 cut(s) 287
HpyF3I CTNAG 1 cut(s) 45
HpySE526I ACGT 1 cut(s) 287
Hsp92II CATG 4 cut(s) 74, 151, 169, 250
LpnPI CCDG 8 cut(s) 34, 72, 111, 129, 156, 200, 246, 283
LweI GCATC 1 cut(s) 31
MaeII ACGT 1 cut(s) 287
MaeIII GTNAC 1 cut(s) 160
MboII GAAGA 3 cut(s) 25, 69, 144
MluCI AATT 2 cut(s) 188, 297
MlyI GAGTC 2 cut(s) 56, 338
MnlI CCTC 1 cut(s) 212
MseI TTAA 2 cut(s) 54, 90
MspR9I CCNGG 1 cut(s) 144
MvaI CCWGG 1 cut(s) 144
NcoI CCATGG 1 cut(s) 165
NlaIII CATG 4 cut(s) 74, 151, 169, 250
NspI RCATGY 1 cut(s) 151
PfeI GAWTC 1 cut(s) 229
PleI GAGTC 2 cut(s) 55, 337
PpsI GAGTC 2 cut(s) 55, 337
Psp6I CCWGG 1 cut(s) 142
PspGI CCWGG 1 cut(s) 142
PstNI CAGNNNCTG 1 cut(s) 44
RsaI GTAC 1 cut(s) 293
RsaNI GTAC 1 cut(s) 292
SaqAI TTAA 2 cut(s) 54, 90
SchI GAGTC 2 cut(s) 56, 338
ScrFI CCNGG 1 cut(s) 144
SetI ASST 3 cut(s) 260, 290, 297
SfaNI GCATC 1 cut(s) 31
Sse9I AATT 2 cut(s) 188, 297
SsiI CCGC 1 cut(s) 199
StyD4I CCNGG 1 cut(s) 142
StyI CCWWGG 1 cut(s) 165
TaiI ACGT 1 cut(s) 290
TaqI TCGA 1 cut(s) 204
TasI AATT 2 cut(s) 188, 297
TfiI GAWTC 1 cut(s) 229
Tru1I TTAA 2 cut(s) 54, 90
Tru9I TTAA 2 cut(s) 54, 90
TspDTI ATGAA 2 cut(s) 59, 242
XceI RCATGY 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.