MD11G1202200.v1.1

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000132
Physical Location & Seq
Forward (+)
29306989 .. 29309017
2029 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1202200.v1.1.491

Sequence Viewer

Length: 1581 bp
ATGCAGTTTAATCAACAAGCTACTTCCAAACTTTCTTTCCTTATGGAGCTTCAATGGCCTTCCTTCCAAGTCCTGTTTACCTTTCTTCTCGTTGTGATCACAGTACTGAAAATAGCGAAGAGAGGCGAAACCAAAGATTCGGCTGTAAATCTACCTCCAGGTCCATGGAAGCTTCCCTTTATAGGAAATATTCACCAGCTCGTTGGGTCTCAGCCTCATCATGGGCTACGAAAATTAGCCAAGAAATATGGACCCCTTATGCATCTACAGCTTGGGGAAGTTTCCACCGTTGTTGTTTCTTCGGCAGAGTATGCCAAAGAGGTGATGAAAACCCATGATGTTGTGTTTGCATCAAGGCCCCATCTCCTTGCTTCAAGGATCATGTCTTACGAATCCACAAACATTGCCTTTGCATCATGTGGTGATTACTGGAGACAACTACGAAAAATTTGCACATTAGAGCTTTTAAGCACTAAACGTGTGCAAGGCTTCCGGCCTCTTAGGGAAGAAGAGGTAGGGAATCTCATTACATGGATTGGTTCAAACGCAAGCTCACCGATCAACCTCACTGAGAAAATTTACTCATCTACATATACCTTCACGTCGCGAGCAGCCTTTGGCAAAAAAAGTGAAGATCACGAAAAGTTCATAGATGCTGTGAAGGAGTCCATAACGGTGGCAGCAGGCTTTGATCTTGCAGATGTTTTTCCTTCTGCCAAACTGCTTAATCTGATAGGTGGAATTAGGCCTACACTTGAGCGGCTGAAAAAAGTAACTGACAGGATAATGGAAAACATCATCAACGAACATAAAAAGAAAAGGTCAACAACAAAAAGTGGAGAAGGTGAAGCAGGGGAAGACCTGGTCGACGTTCTCTTAAAATTTCACGAGCATGGAAATGGCCTTGAGTTTTCCTTAACTACTGACAACATCAAAGCAGTAATATTGGACATTTTCGGAGCTGGGAGTGAGACATCTGCTACAACCGTAGATTGGGCCATGTCAGAAATGATAAAAAATCCAAGAATATTGAAAATGACACAGGATGAGGTGAGAGAAGTGTATAACAGAAATGGGAAGGTAGACGAACCAAGCATTGGTGAGATGAAATATTTAAGCTTGGTGATCAAAGAGACACTCAGGCTACACCCTCCTGCTCCACTCTTGCTTCCAAGAGAATCTAGTGAGAGTTGTAAGATTAATGGATATGATATACCTGTCAAAACCAAGGTGATTGTGAATGGATGGGCAATTGGAAGAGATCCCAATTACTGGACTGAACCAGAGAGCTTCTATCCAGAGAGGTTCCTTGATAGCTCCATTGACTACAAGGGAACAAACTTTGAGTATATCCCATTTGGCGCTGGAAGGAGGATATGCCCGGGAATTTCATATGGTCTGGCCAACGTTGAGCTCCCACTTGCCCTTTTGTTGTACCATTTTGATTGGAAACTCCCTAATGGGATGTCGCATGAAGACCTGGACATGACTGAGCTTTTCGGCGTTACAGTTCGAAGAAAAGAAGATCTGCGCTTGATCCCCATTCCTTATCATCCTCCATCTAGTAAGAACTGCCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

527

Amino Acids

59.29

Weight (kDa)

8.09

Isoelectric Point (pI)

40.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 52 - 504 4.1e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 1097, 1272
AccBSI CCGCTC 1 cut(s) 760
AccI GTMKAC 2 cut(s) 867, 1083
AccII CGCG 1 cut(s) 607
AciI CCGC 1 cut(s) 760
AclI AACGTT 1 cut(s) 1407
AclWI GGATC 3 cut(s) 386, 1256, 1531
AcoI YGGCCR 1 cut(s) 1401
AcsI RAATTY 4 cut(s) 447, 576, 881, 1386
AfaI GTAC 2 cut(s) 105, 1436
AfiI CCNNNNNNNGG 5 cut(s) 182, 221, 993, 1097, 1272
AflIII ACRYGT 1 cut(s) 478
AgsI TTSAA 4 cut(s) 53, 375, 543, 1033
AjiI CACGTC 1 cut(s) 603
AjnI CCWGG 3 cut(s) 157, 861, 1479
AjuI GAANNNNNNNTTGG 4 cut(s) 20, 52, 1080, 1112
Alw21I GWGCWC 1 cut(s) 1416
Alw26I GTCTC 4 cut(s) 213, 427, 965, 1127
AlwI GGATC 3 cut(s) 386, 1256, 1531
Ama87I CYCGRG 1 cut(s) 1381
AoxI GGCC 7 cut(s) 56, 356, 494, 746, 901, 996, 1401
ApeKI GCWGC 2 cut(s) 611, 680
ApoI RAATTY 4 cut(s) 447, 576, 881, 1386
AseI ATTAAT 1 cut(s) 1200
AspLEI GCGC 2 cut(s) 1364, 1533
AspS9I GGNCC 4 cut(s) 161, 251, 357, 996
AsuC2I CCSGG 2 cut(s) 1382, 1383
AsuHPI GGTGA 9 cut(s) 185, 334, 434, 546, 857, 1063, 1112, 1135, 1243
AsuII TTCGAA 1 cut(s) 1513
AvaI CYCGRG 1 cut(s) 1381
AvaII GGWCC 2 cut(s) 161, 251
BalI TGGCCA 1 cut(s) 1403
BanII GRGCYC 1 cut(s) 1416
BauI CACGAG 1 cut(s) 887
BbsI GAAGAC 2 cut(s) 864, 1482
Bbv12I GWGCWC 1 cut(s) 1416
BbvI GCAGC 2 cut(s) 623, 692
BccI CCATC 3 cut(s) 369, 1239, 1567
BcgI CGANNNNNNTGC 2 cut(s) 432, 466
BciT130I CCWGG 3 cut(s) 159, 863, 1481
BclI TGATCA 2 cut(s) 96, 1125
BcnI CCSGG 2 cut(s) 1382, 1383
BcoDI GTCTC 4 cut(s) 213, 427, 965, 1127
BfaI CTAG 2 cut(s) 1182, 1563
BfmI CTRYAG 1 cut(s) 266
BfoI RGCGCY 1 cut(s) 1365
BglII AGATCT 1 cut(s) 1525
BisI GCNGC 3 cut(s) 612, 681, 761
BlsI GCNGC 3 cut(s) 613, 682, 762
BmcAI AGTACT 1 cut(s) 105
Bme1390I CCNGG 5 cut(s) 159, 863, 1382, 1383, 1481
Bme18I GGWCC 2 cut(s) 161, 251
BmeT110I CYCGRG 1 cut(s) 1381
BmgBI CACGTC 1 cut(s) 603
BmgT120I GGNCC 4 cut(s) 161, 251, 357, 996
BmiI GGNNCC 3 cut(s) 253, 359, 1307
BmrFI CCNGG 5 cut(s) 159, 863, 1382, 1383, 1481
BmsI GCATC 4 cut(s) 271, 359, 422, 643
BpiI GAAGAC 2 cut(s) 864, 1482
BpmI CTGGAG 2 cut(s) 141, 451
Bpu14I TTCGAA 1 cut(s) 1513
BpuEI CTTGAG 2 cut(s) 776, 926
BpuMI CCSGG 2 cut(s) 1382, 1383
BsaI GGTCTC 1 cut(s) 213
BsaJI CCNNGG 3 cut(s) 164, 1227, 1381
Bsc4I CCNNNNNNNGG 5 cut(s) 182, 221, 993, 1097, 1272
Bse1I ACTGG 3 cut(s) 434, 1277, 1576
Bse3DI GCAATG 1 cut(s) 402
BseBI CCWGG 3 cut(s) 159, 863, 1481
BseDI CCNNGG 3 cut(s) 164, 1227, 1381
BseGI GGATG 4 cut(s) 1051, 1250, 1470, 1552
BseLI CCNNNNNNNGG 5 cut(s) 182, 221, 993, 1097, 1272
BseMI GCAATG 1 cut(s) 402
BseMII CTCAG 4 cut(s) 224, 561, 1153, 1482
BseNI ACTGG 3 cut(s) 434, 1277, 1576
BseXI GCAGC 2 cut(s) 623, 692
BseYI CCCAGC 1 cut(s) 962
Bsh1236I CGCG 1 cut(s) 607
BshFI GGCC 7 cut(s) 58, 358, 496, 748, 903, 998, 1403
BsiHKAI GWGCWC 1 cut(s) 1416
BsiHKCI CYCGRG 1 cut(s) 1381
BsiSI CCGG 2 cut(s) 493, 1382
BslI CCNNNNNNNGG 5 cut(s) 182, 221, 993, 1097, 1272
BsmAI GTCTC 4 cut(s) 213, 427, 965, 1127
BsnI GGCC 7 cut(s) 58, 358, 496, 748, 903, 998, 1403
Bso31I GGTCTC 1 cut(s) 213
BsoBI CYCGRG 1 cut(s) 1381
Bsp119I TTCGAA 1 cut(s) 1513
Bsp1286I GDGCHC 1 cut(s) 1416
Bsp143I GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
Bsp19I CCATGG 1 cut(s) 164
Bsp68I TCGCGA 1 cut(s) 607
BspACI CCGC 1 cut(s) 760
BspANI GGCC 7 cut(s) 58, 358, 496, 748, 903, 998, 1403
BspCNI CTCAG 4 cut(s) 223, 562, 1152, 1483
BspFNI CGCG 1 cut(s) 607
BspLI GGNNCC 3 cut(s) 253, 359, 1307
BspPI GGATC 3 cut(s) 386, 1256, 1531
BspT104I TTCGAA 1 cut(s) 1513
BspTNI GGTCTC 1 cut(s) 213
BsrBI CCGCTC 1 cut(s) 760
BsrDI GCAATG 1 cut(s) 402
BsrI ACTGG 3 cut(s) 434, 1277, 1576
BssECI CCNNGG 3 cut(s) 164, 1227, 1381
BssMI GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
BssSI CACGAG 1 cut(s) 887
BssT1I CCWWGG 2 cut(s) 164, 1227
Bst2BI CACGAG 1 cut(s) 887
Bst2UI CCWGG 3 cut(s) 159, 863, 1481
Bst4CI ACNGT 5 cut(s) 103, 289, 676, 988, 1510
Bst6I CTCTTC 3 cut(s) 113, 504, 1252
BstAPI GCANNNNNTGC 1 cut(s) 311
BstBI TTCGAA 1 cut(s) 1513
BstC8I GCNNGC 3 cut(s) 550, 609, 685
BstDEI CTNAG 5 cut(s) 210, 500, 570, 1139, 1491
BstDSI CCRYGG 1 cut(s) 164
BstF5I GGATG 4 cut(s) 1051, 1250, 1470, 1552
BstFNI CGCG 1 cut(s) 607
BstH2I RGCGCY 1 cut(s) 1365
BstHHI GCGC 2 cut(s) 1364, 1533
BstKTI GATC 9 cut(s) 99, 381, 561, 637, 694, 1128, 1264, 1528, 1539
BstMAI GTCTC 4 cut(s) 213, 427, 965, 1127
BstMBI GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
BstMWI GCNNNNNNNGC 3 cut(s) 55, 268, 311
BstNI CCWGG 3 cut(s) 159, 863, 1481
BstSCI CCNGG 5 cut(s) 157, 861, 1380, 1381, 1479
BstSFI CTRYAG 1 cut(s) 266
BstUI CGCG 1 cut(s) 607
BstV1I GCAGC 2 cut(s) 623, 692
BstV2I GAAGAC 2 cut(s) 864, 1482
BstX2I RGATCY 2 cut(s) 1261, 1525
BstXI CCANNNNNNTGG 3 cut(s) 165, 203, 676
BstYI RGATCY 2 cut(s) 1261, 1525
BsuRI GGCC 7 cut(s) 58, 358, 496, 748, 903, 998, 1403
BtgI CCRYGG 1 cut(s) 164
BtrI CACGTC 1 cut(s) 603
BtsCI GGATG 4 cut(s) 1051, 1250, 1470, 1552
BtsIMutI CAGTG 1 cut(s) 567
BtuMI TCGCGA 1 cut(s) 607
Cac8I GCNNGC 3 cut(s) 550, 609, 685
CfoI GCGC 2 cut(s) 1364, 1533
Cfr13I GGNCC 4 cut(s) 161, 251, 357, 996
Cfr9I CCCGGG 1 cut(s) 1381
CsiI ACCWGGT 1 cut(s) 861
Csp6I GTAC 2 cut(s) 104, 1435
CspCI CAANNNNNGTGG 4 cut(s) 274, 309, 385, 420
CviQI GTAC 2 cut(s) 104, 1435
DdeI CTNAG 5 cut(s) 210, 500, 570, 1139, 1491
DpnI GATC 9 cut(s) 98, 380, 560, 636, 693, 1127, 1263, 1527, 1538
DpnII GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
EaeI YGGCCR 1 cut(s) 1401
Eam1104I CTCTTC 3 cut(s) 113, 504, 1252
EarI CTCTTC 3 cut(s) 113, 504, 1252
Ecl136II GAGCTC 1 cut(s) 1414
Eco130I CCWWGG 2 cut(s) 164, 1227
Eco147I AGGCCT 1 cut(s) 748
Eco24I GRGCYC 1 cut(s) 1416
Eco31I GGTCTC 1 cut(s) 213
Eco47I GGWCC 2 cut(s) 161, 251
Eco53kI GAGCTC 1 cut(s) 1414
Eco88I CYCGRG 1 cut(s) 1381
EcoICRI GAGCTC 1 cut(s) 1414
EcoO109I RGGNCCY 1 cut(s) 357
EcoRII CCWGG 3 cut(s) 157, 861, 1479
EcoT14I CCWWGG 2 cut(s) 164, 1227
EcoT22I ATGCAT 1 cut(s) 264
EcoT38I GRGCYC 1 cut(s) 1416
ErhI CCWWGG 2 cut(s) 164, 1227
FalI AAGNNNNNCTT 2 cut(s) 161, 193
FauNDI CATATG 1 cut(s) 1393
FbaI TGATCA 2 cut(s) 96, 1125
FblI GTMKAC 2 cut(s) 867, 1083
Fnu4HI GCNGC 3 cut(s) 612, 681, 761
FokI GGATG 4 cut(s) 1058, 1257, 1477, 1539
FriOI GRGCYC 1 cut(s) 1416
Fsp4HI GCNGC 3 cut(s) 612, 681, 761
FspBI CTAG 2 cut(s) 1182, 1563
GlaI GCGC 2 cut(s) 1363, 1532
GluI GCNGC 3 cut(s) 612, 681, 761
GsaI CCCAGC 1 cut(s) 966
GsuI CTGGAG 2 cut(s) 141, 451
HaeII RGCGCY 1 cut(s) 1365
HaeIII GGCC 7 cut(s) 58, 358, 496, 748, 903, 998, 1403
HapII CCGG 2 cut(s) 493, 1382
HhaI GCGC 2 cut(s) 1364, 1533
Hin6I GCGC 2 cut(s) 1362, 1531
HinP1I GCGC 2 cut(s) 1362, 1531
HincII GTYRAC 2 cut(s) 825, 868
HindII GTYRAC 2 cut(s) 825, 868
HindIII AAGCTT 2 cut(s) 170, 1117
HinfI GANTC 5 cut(s) 137, 392, 520, 665, 1178
HpaII CCGG 2 cut(s) 493, 1382
HphI GGTGA 9 cut(s) 185, 334, 434, 546, 857, 1063, 1112, 1135, 1243
Hpy166II GTNNAC 4 cut(s) 78, 825, 868, 1084
Hpy188I TCNGA 3 cut(s) 732, 959, 1006
Hpy188III TCNNGA 4 cut(s) 606, 638, 887, 1298
Hpy8I GTNNAC 4 cut(s) 78, 825, 868, 1084
Hpy99I CGWCG 2 cut(s) 607, 872
HpyAV CCTTC 8 cut(s) 69, 73, 607, 655, 720, 836, 1072, 1362
HpyCH4III ACNGT 5 cut(s) 103, 289, 676, 988, 1510
HpyCH4IV ACGT 4 cut(s) 478, 602, 870, 1407
HpyCH4V TGCA 7 cut(s) 4, 262, 350, 413, 453, 484, 698
HpyF10VI GCNNNNNNNGC 3 cut(s) 55, 268, 311
HpyF3I CTNAG 5 cut(s) 210, 500, 570, 1139, 1491
HpySE526I ACGT 4 cut(s) 478, 602, 870, 1407
HspAI GCGC 2 cut(s) 1362, 1531
Ksp22I TGATCA 2 cut(s) 96, 1125
Kzo9I GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
LmnI GCTCC 5 cut(s) 46, 959, 1162, 1322, 1419
Lsp1109I GCAGC 2 cut(s) 623, 692
LweI GCATC 4 cut(s) 271, 359, 422, 643
MabI ACCWGGT 1 cut(s) 861
MaeI CTAG 2 cut(s) 1182, 1563
MaeII ACGT 4 cut(s) 478, 602, 870, 1407
MaeIII GTNAC 2 cut(s) 772, 1504
MalI GATC 9 cut(s) 98, 380, 560, 636, 693, 1127, 1263, 1527, 1538
MbiI CCGCTC 1 cut(s) 760
MboI GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
MfeI CAATTG 1 cut(s) 1251
MflI RGATCY 2 cut(s) 1261, 1525
MhlI GDGCHC 1 cut(s) 1416
MlsI TGGCCA 1 cut(s) 1403
MluCI AATT 8 cut(s) 233, 447, 576, 741, 881, 1251, 1267, 1386
MluNI TGGCCA 1 cut(s) 1403
MlyI GAGTC 1 cut(s) 674
Mox20I TGGCCA 1 cut(s) 1403
Mph1103I ATGCAT 1 cut(s) 264
MscI TGGCCA 1 cut(s) 1403
MseI TTAA 7 cut(s) 9, 467, 726, 878, 917, 1115, 1200
MslI CAYNNNNRTG 3 cut(s) 674, 891, 897
Msp20I TGGCCA 1 cut(s) 1403
MspI CCGG 2 cut(s) 493, 1382
MspR9I CCNGG 5 cut(s) 159, 863, 1382, 1383, 1481
MunI CAATTG 1 cut(s) 1251
MvaI CCWGG 3 cut(s) 159, 863, 1481
MvnI CGCG 1 cut(s) 607
MwoI GCNNNNNNNGC 3 cut(s) 55, 268, 311
NciI CCSGG 2 cut(s) 1382, 1383
NcoI CCATGG 1 cut(s) 164
NdeI CATATG 1 cut(s) 1393
NdeII GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
NlaIV GGNNCC 3 cut(s) 253, 359, 1307
NruI TCGCGA 1 cut(s) 607
NsiI ATGCAT 1 cut(s) 264
NspV TTCGAA 1 cut(s) 1513
PceI AGGCCT 1 cut(s) 748
PfeI GAWTC 4 cut(s) 137, 392, 520, 1178
PflFI GACNNNGTC 1 cut(s) 863
PflMI CCANNNNNTGG 2 cut(s) 1097, 1272
PkrI GCNGC 3 cut(s) 613, 682, 762
PleI GAGTC 1 cut(s) 673
PpsI GAGTC 1 cut(s) 673
PshBI ATTAAT 1 cut(s) 1200
Psp124BI GAGCTC 1 cut(s) 1416
Psp1406I AACGTT 1 cut(s) 1407
Psp6I CCWGG 3 cut(s) 157, 861, 1479
PspFI CCCAGC 1 cut(s) 962
PspGI CCWGG 3 cut(s) 157, 861, 1479
PspN4I GGNNCC 3 cut(s) 253, 359, 1307
PspPI GGNCC 4 cut(s) 161, 251, 357, 996
PsuI RGATCY 2 cut(s) 1261, 1525
PsyI GACNNNGTC 1 cut(s) 863
RruI TCGCGA 1 cut(s) 607
RsaI GTAC 2 cut(s) 105, 1436
RsaNI GTAC 2 cut(s) 104, 1435
RseI CAYNNNNRTG 3 cut(s) 674, 891, 897
SacI GAGCTC 1 cut(s) 1416
SalI GTCGAC 1 cut(s) 866
SaqAI TTAA 7 cut(s) 9, 467, 726, 878, 917, 1115, 1200
SatI GCNGC 3 cut(s) 612, 681, 761
Sau3AI GATC 9 cut(s) 96, 378, 558, 634, 691, 1125, 1261, 1525, 1536
Sau96I GGNCC 4 cut(s) 161, 251, 357, 996
ScaI AGTACT 1 cut(s) 105
SchI GAGTC 1 cut(s) 674
ScrFI CCNGG 5 cut(s) 159, 863, 1382, 1383, 1481
SduI GDGCHC 1 cut(s) 1416
SexAI ACCWGGT 1 cut(s) 861
SfaNI GCATC 4 cut(s) 271, 359, 422, 643
SfcI CTRYAG 1 cut(s) 266
SfuI TTCGAA 1 cut(s) 1513
SinI GGWCC 2 cut(s) 161, 251
SmaI CCCGGG 1 cut(s) 1383
SmiMI CAYNNNNRTG 3 cut(s) 674, 891, 897
SmlI CTYRAG 2 cut(s) 755, 905
SmoI CTYRAG 2 cut(s) 755, 905
Sse9I AATT 8 cut(s) 233, 447, 576, 741, 881, 1251, 1267, 1386
SseBI AGGCCT 1 cut(s) 748
SsiI CCGC 1 cut(s) 760
SspI AATATT 4 cut(s) 190, 945, 1029, 1112
SspMI CTAG 2 cut(s) 1182, 1563
SstI GAGCTC 1 cut(s) 1416
StuI AGGCCT 1 cut(s) 748
StyD4I CCNGG 5 cut(s) 157, 861, 1380, 1381, 1479
StyI CCWWGG 2 cut(s) 164, 1227
TaaI ACNGT 5 cut(s) 103, 289, 676, 988, 1510
TaiI ACGT 4 cut(s) 481, 605, 873, 1410
TaqI TCGA 2 cut(s) 867, 1513
TasI AATT 8 cut(s) 233, 447, 576, 741, 881, 1251, 1267, 1386
TatI WGTACW 1 cut(s) 103
TauI GCSGC 1 cut(s) 763
TfiI GAWTC 4 cut(s) 137, 392, 520, 1178
Tru1I TTAA 7 cut(s) 9, 467, 726, 878, 917, 1115, 1200
Tru9I TTAA 7 cut(s) 9, 467, 726, 878, 917, 1115, 1200
TscAI CASTG 1 cut(s) 574
TseI GCWGC 2 cut(s) 611, 680
TspDTI ATGAA 5 cut(s) 341, 637, 1121, 1380, 1488
TspMI CCCGGG 1 cut(s) 1381
TspRI CASTG 1 cut(s) 574
Tth111I GACNNNGTC 1 cut(s) 863
Van91I CCANNNNNTGG 2 cut(s) 1097, 1272
VpaK11BI GGWCC 2 cut(s) 161, 251
VspI ATTAAT 1 cut(s) 1200
XapI RAATTY 4 cut(s) 447, 576, 881, 1386
XmaI CCCGGG 1 cut(s) 1381
XmiI GTMKAC 2 cut(s) 867, 1083
XspI CTAG 2 cut(s) 1182, 1563
ZrmI AGTACT 1 cut(s) 105
Zsp2I ATGCAT 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.