MD00G1138700.v1.1

Belongs to the cytochrome P450 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0000132
Physical Location & Seq
Reverse (-)
30039191 .. 30041563
2373 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1138700.v1.1.491

Sequence Viewer

Length: 1623 bp
ATGATGAAATTGATCACAGCTTATCTGGATCAAATTATGTTTCTAATTGACGAAACGCCCTATTTTCCATTTTTCACTTCTCTCCTTGTCTGCATCCTGGTGATTTTTTGGAAGCGATCCAGAGCCGGAGGCCTAAAGTCACCCCCCGGGCCATGGAAGCTGCCTGTTATTGGAAACTTGCACCAGATGGTCGGTCCGTTGCCACACCACACACTGGGAGACTTGGCCAAGAAGCATGGACCCGTCATGTACCTTAAACTGGGTCAATTAGACGCCGTGATTATTTCATCTGCCAAAGCTGCCCAGGAGGTGTTGAAGACACATGAGCTTACATTTGCGCAGAGGCCTATGGTTTTGGCAGCAGAGGTTATGTCTTTTGGTCAAGCAAGTATTTTCTTTGCTCGTTATGGAGATTTATGGAGATCGCTGAGAAAGATTTGTATGTTCGAGCTTCTGAGCGCCAAACGTGTGCAGTCTTTCGGATCCGTAAGAGAAGAAGAGGTATGGAATCTTGTTGAGACCATTGGCTCAATGTCTCACAAGGGACTTGCCATCAATTTTAGGGACAGGTGCTGCAGCTTCACAAACGACGTAGTGTCAAAGGCAGCATTTGGGAAAAAATGCAAAGACCAAAAGGAGTTCCTTTCCCTTCTTGACGAAGTAATCAAACTTGGTAGTGGGTTTGATATTCCTGATTTGTTTCCTTCACTCAGTTTTCTTGGGTTCATTACTGGGTCGATCCCTGCTCTCAAAGACATAAAAAGAAAGATCGGTATGATTCTCGAAAATATCATCAACGATCATAAAATCAAAAGATCCAAAAAGGACTTGATGATCAGTGGTACTAGTACCACTACAGCAGGCAAGGACAAAGCAGAGGAGGAGGAAGAAGATTTTGTTGACGTACTTCTAAAACTTAAAGAATCCAACAAGGTGGAGTATAATTTCACAACCAATCAGATCAAAGATATCATTATGGACATCTTCTCTGCAGGAAGCGAGACTTCAGCTACTACCTTAGAATGGGCAATGTCAGAGTTGATGAGAAACCCAAGAATCATGAAGAGGGCTCAAGCTGAAGTGAGACAGTCAGTCCTCCAATTTGAAGGGAAAAAAAGAAAAGTTATTGAAGAAAGAGATGTTAAAAAAATGGACTACTTGAAATCGGTGGTGAAAGAAACTCTGAGGTTACACGCCCCAGGCCCTTTGCTCCCAAGAGAAGCAAGGGACACGGTTCAAATTGGCGGATTCAAAGTACCAGTTAAATCAAAACTAATTATTAATGTATGGGCAATAGGAAGAGACCCGGAGATATGGGGGGCAGATGCTGAGTGTTTTAAGCCAGAGAGGTTTCATGGCTCTTCTGTTGACTTTAAGGGTTTTGACTTTGAGTTCACTCCGTTTGGGGCCGGCAGAAGAATATGTCCAGGCATGTCATTTGGTGTTAACATGATTGAACTTGCTCTTGCTGAATTGCTCTACCGCTTCGATTGGAAACTGGCAAATGGGATGAATCCAGACGAACTTGACATGAGAGAGAGCTTTGGACTGAGCTGTAGGAAAAAGAATGCTTTGTACGTAATCGCCACCCCACATTTTACTTCACTCGGCGAGTCAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

541

Amino Acids

60.94

Weight (kDa)

8.85

Isoelectric Point (pI)

35.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 48 - 523 2.2e-90 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 339
AccB7I CCANNNNNTGG 1 cut(s) 214
AciI CCGC 2 cut(s) 1245, 1483
AclWI GGATC 6 cut(s) 36, 111, 477, 490, 733, 810
AcoI YGGCCR 1 cut(s) 225
AcuI CTGAAG 2 cut(s) 990, 1098
AcyI GRCGYC 1 cut(s) 273
AfaI GTAC 6 cut(s) 251, 844, 850, 906, 1257, 1577
AfiI CCNNNNNNNGG 5 cut(s) 153, 170, 214, 259, 1023
AflIII ACRYGT 1 cut(s) 466
AgsI TTSAA 7 cut(s) 316, 1106, 1130, 1162, 1238, 1252, 1457
AhdI GACNNNNNGTC 2 cut(s) 595, 1091
AhlI ACTAGT 1 cut(s) 845
AjnI CCWGG 4 cut(s) 96, 303, 1198, 1426
Alw26I GTCTC 6 cut(s) 213, 512, 540, 995, 1078, 1296
AlwI GGATC 6 cut(s) 36, 111, 477, 490, 733, 810
AlwNI CAGNNNCTG 2 cut(s) 573, 1328
Ama87I CYCGRG 1 cut(s) 146
AoxI GGCC 6 cut(s) 130, 149, 225, 344, 1201, 1407
ApeKI GCWGC 6 cut(s) 160, 299, 359, 573, 576, 605
AseI ATTAAT 1 cut(s) 1281
AspLEI GCGC 2 cut(s) 340, 461
AspS9I GGNCC 5 cut(s) 149, 194, 239, 1202, 1407
AsuC2I CCSGG 3 cut(s) 147, 148, 1307
AsuHPI GGTGA 3 cut(s) 112, 132, 1183
AvaI CYCGRG 1 cut(s) 146
AvaII GGWCC 2 cut(s) 194, 239
BalI TGGCCA 1 cut(s) 227
BamHI GGATCC 1 cut(s) 482
BanII GRGCYC 1 cut(s) 1072
BbsI GAAGAC 1 cut(s) 323
BbvI GCAGC 6 cut(s) 147, 286, 371, 560, 588, 617
BccI CCATC 2 cut(s) 181, 560
BceAI ACGGC 1 cut(s) 260
BciT130I CCWGG 4 cut(s) 98, 305, 1200, 1428
BclI TGATCA 2 cut(s) 12, 834
BcnI CCSGG 3 cut(s) 147, 148, 1307
BcoDI GTCTC 6 cut(s) 213, 512, 540, 995, 1078, 1296
BcuI ACTAGT 1 cut(s) 845
BfaI CTAG 1 cut(s) 846
BfmI CTRYAG 4 cut(s) 574, 855, 990, 1555
BfoI RGCGCY 1 cut(s) 462
BisI GCNGC 6 cut(s) 161, 300, 360, 574, 577, 606
BlsI GCNGC 6 cut(s) 162, 301, 361, 575, 578, 607
Bme1390I CCNGG 7 cut(s) 98, 147, 148, 305, 1200, 1307, 1428
Bme18I GGWCC 2 cut(s) 194, 239
BmeRI GACNNNNNGTC 2 cut(s) 595, 1091
BmeT110I CYCGRG 1 cut(s) 146
BmgT120I GGNCC 5 cut(s) 149, 194, 239, 1202, 1407
BmiI GGNNCC 3 cut(s) 241, 484, 1408
BmrFI CCNGG 7 cut(s) 98, 147, 148, 305, 1200, 1307, 1428
BmrI ACTGGG 3 cut(s) 224, 269, 741
BmsI GCATC 2 cut(s) 102, 1315
BmuI ACTGGG 3 cut(s) 224, 269, 741
BpiI GAAGAC 1 cut(s) 323
BpuEI CTTGAG 1 cut(s) 1056
BpuMI CCSGG 3 cut(s) 147, 148, 1307
BsaAI YACGTR 1 cut(s) 1579
BsaHI GRCGYC 1 cut(s) 273
BsaI GGTCTC 2 cut(s) 512, 1296
BsaJI CCNNGG 5 cut(s) 145, 146, 152, 303, 1198
Bsc4I CCNNNNNNNGG 5 cut(s) 153, 170, 214, 259, 1023
Bse118I RCCGGY 1 cut(s) 1409
Bse1I ACTGG 5 cut(s) 219, 264, 736, 1259, 1503
Bse3DI GCAATG 1 cut(s) 1035
BseBI CCWGG 4 cut(s) 98, 305, 1200, 1428
BseDI CCNNGG 5 cut(s) 145, 146, 152, 303, 1198
BseGI GGATG 2 cut(s) 93, 1515
BseLI CCNNNNNNNGG 5 cut(s) 153, 170, 214, 259, 1023
BseMI GCAATG 1 cut(s) 1035
BseMII CTCAG 6 cut(s) 419, 446, 724, 1175, 1320, 1541
BseNI ACTGG 5 cut(s) 219, 264, 736, 1259, 1503
BseRI GAGGAG 2 cut(s) 893, 896
BseXI GCAGC 6 cut(s) 147, 286, 371, 560, 588, 617
BsgI GTGCAG 1 cut(s) 491
BshFI GGCC 6 cut(s) 132, 151, 227, 346, 1203, 1409
BsiHKCI CYCGRG 1 cut(s) 146
BsiSI CCGG 4 cut(s) 126, 147, 1307, 1410
BslFI GGGAC 3 cut(s) 558, 578, 1241
BslI CCNNNNNNNGG 5 cut(s) 153, 170, 214, 259, 1023
BsmAI GTCTC 6 cut(s) 213, 512, 540, 995, 1078, 1296
BsmFI GGGAC 3 cut(s) 558, 578, 1241
BsmI GAATGC 1 cut(s) 1573
BsnI GGCC 6 cut(s) 132, 151, 227, 346, 1203, 1409
Bso31I GGTCTC 2 cut(s) 512, 1296
BsoBI CYCGRG 1 cut(s) 146
Bsp1286I GDGCHC 1 cut(s) 1072
Bsp19I CCATGG 1 cut(s) 152
BspACI CCGC 2 cut(s) 1245, 1483
BspANI GGCC 6 cut(s) 132, 151, 227, 346, 1203, 1409
BspCNI CTCAG 6 cut(s) 420, 447, 723, 1176, 1321, 1542
BspHI TCATGA 1 cut(s) 1059
BspLI GGNNCC 3 cut(s) 241, 484, 1408
BspMAI CTGCAG 2 cut(s) 578, 994
BspPI GGATC 6 cut(s) 36, 111, 477, 490, 733, 810
BspQI GCTCTTC 1 cut(s) 1366
BspTNI GGTCTC 2 cut(s) 512, 1296
BsrDI GCAATG 1 cut(s) 1035
BsrFI RCCGGY 1 cut(s) 1409
BsrI ACTGG 5 cut(s) 219, 264, 736, 1259, 1503
BssAI RCCGGY 1 cut(s) 1409
BssECI CCNNGG 5 cut(s) 145, 146, 152, 303, 1198
BssNI GRCGYC 1 cut(s) 273
BssT1I CCWWGG 1 cut(s) 152
Bst2UI CCWGG 4 cut(s) 98, 305, 1200, 1428
Bst4CI ACNGT 2 cut(s) 1089, 1234
Bst6I CTCTTC 4 cut(s) 492, 1058, 1294, 1366
BstACI GRCGYC 1 cut(s) 273
BstBAI YACGTR 1 cut(s) 1579
BstC8I GCNNGC 2 cut(s) 862, 1411
BstDEI CTNAG 7 cut(s) 428, 455, 710, 1018, 1184, 1329, 1550
BstDSI CCRYGG 1 cut(s) 152
BstF5I GGATG 2 cut(s) 93, 1515
BstH2I RGCGCY 1 cut(s) 462
BstHHI GCGC 2 cut(s) 340, 461
BstMAI GTCTC 6 cut(s) 213, 512, 540, 995, 1078, 1296
BstMWI GCNNNNNNNGC 2 cut(s) 157, 299
BstNI CCWGG 4 cut(s) 98, 305, 1200, 1428
BstNSI RCATGY 1 cut(s) 1435
BstSCI CCNGG 7 cut(s) 96, 145, 146, 303, 1198, 1305, 1426
BstSFI CTRYAG 4 cut(s) 574, 855, 990, 1555
BstSNI TACGTA 1 cut(s) 1579
BstV1I GCAGC 6 cut(s) 147, 286, 371, 560, 588, 617
BstV2I GAAGAC 1 cut(s) 323
BstX2I RGATCY 2 cut(s) 482, 815
BstXI CCANNNNNNTGG 1 cut(s) 934
BstYI RGATCY 2 cut(s) 482, 815
BsuRI GGCC 6 cut(s) 132, 151, 227, 346, 1203, 1409
BtgI CCRYGG 1 cut(s) 152
BtsCI GGATG 2 cut(s) 93, 1515
BtsIMutI CAGTG 2 cut(s) 212, 844
Cac8I GCNNGC 2 cut(s) 862, 1411
CaiI CAGNNNCTG 2 cut(s) 573, 1328
CciI TCATGA 1 cut(s) 1059
CfoI GCGC 2 cut(s) 340, 461
Cfr10I RCCGGY 1 cut(s) 1409
Cfr13I GGNCC 5 cut(s) 149, 194, 239, 1202, 1407
Cfr9I CCCGGG 1 cut(s) 146
CpoI CGGWCCG 1 cut(s) 194
CseI GACGC 1 cut(s) 281
Csp6I GTAC 6 cut(s) 250, 843, 849, 905, 1256, 1576
CspI CGGWCCG 1 cut(s) 194
CviAII CATG 9 cut(s) 153, 236, 247, 323, 1060, 1355, 1432, 1450, 1531
CviQI GTAC 6 cut(s) 250, 843, 849, 905, 1256, 1576
DdeI CTNAG 7 cut(s) 428, 455, 710, 1018, 1184, 1329, 1550
DriI GACNNNNNGTC 2 cut(s) 595, 1091
EaeI YGGCCR 1 cut(s) 225
Eam1104I CTCTTC 4 cut(s) 492, 1058, 1294, 1366
Eam1105I GACNNNNNGTC 2 cut(s) 595, 1091
EarI CTCTTC 4 cut(s) 492, 1058, 1294, 1366
EciI GGCGGA 1 cut(s) 1260
Eco105I TACGTA 1 cut(s) 1579
Eco130I CCWWGG 1 cut(s) 152
Eco147I AGGCCT 2 cut(s) 132, 346
Eco24I GRGCYC 1 cut(s) 1072
Eco31I GGTCTC 2 cut(s) 512, 1296
Eco32I GATATC 1 cut(s) 970
Eco47I GGWCC 2 cut(s) 194, 239
Eco57I CTGAAG 2 cut(s) 990, 1098
Eco88I CYCGRG 1 cut(s) 146
EcoO109I RGGNCCY 1 cut(s) 1202
EcoRII CCWGG 4 cut(s) 96, 303, 1198, 1426
EcoRV GATATC 1 cut(s) 970
EcoT14I CCWWGG 1 cut(s) 152
EcoT38I GRGCYC 1 cut(s) 1072
ErhI CCWWGG 1 cut(s) 152
FaeI CATG 9 cut(s) 156, 239, 250, 326, 1063, 1358, 1435, 1453, 1534
FalI AAGNNNNNCTT 2 cut(s) 988, 1020
FaqI GGGAC 3 cut(s) 558, 578, 1241
FatI CATG 9 cut(s) 152, 235, 246, 322, 1059, 1354, 1431, 1449, 1530
FbaI TGATCA 2 cut(s) 12, 834
Fnu4HI GCNGC 6 cut(s) 161, 300, 360, 574, 577, 606
FokI GGATG 2 cut(s) 80, 1522
FriOI GRGCYC 1 cut(s) 1072
Fsp4HI GCNGC 6 cut(s) 161, 300, 360, 574, 577, 606
FspBI CTAG 1 cut(s) 846
FspI TGCGCA 1 cut(s) 339
GlaI GCGC 2 cut(s) 339, 460
GluI GCNGC 6 cut(s) 161, 300, 360, 574, 577, 606
HaeII RGCGCY 1 cut(s) 462
HaeIII GGCC 6 cut(s) 132, 151, 227, 346, 1203, 1409
HapII CCGG 4 cut(s) 126, 147, 1307, 1410
HgaI GACGC 1 cut(s) 281
HhaI GCGC 2 cut(s) 340, 461
Hin1I GRCGYC 1 cut(s) 273
Hin1II CATG 9 cut(s) 156, 239, 250, 326, 1063, 1358, 1435, 1453, 1534
Hin6I GCGC 2 cut(s) 338, 459
HinP1I GCGC 2 cut(s) 338, 459
HincII GTYRAC 3 cut(s) 901, 1369, 1447
HindII GTYRAC 3 cut(s) 901, 1369, 1447
HinfI GANTC 7 cut(s) 508, 778, 923, 1056, 1248, 1513, 1613
HpaI GTTAAC 1 cut(s) 1447
HpaII CCGG 4 cut(s) 126, 147, 1307, 1410
HphI GGTGA 3 cut(s) 112, 132, 1183
Hpy166II GTNNAC 4 cut(s) 901, 1369, 1395, 1447
Hpy188I TCNGA 6 cut(s) 456, 482, 960, 1036, 1185, 1618
Hpy188III TCNNGA 7 cut(s) 26, 120, 653, 692, 782, 1060, 1517
Hpy8I GTNNAC 4 cut(s) 901, 1369, 1395, 1447
Hpy99I CGWCG 1 cut(s) 593
HpyAV CCTTC 3 cut(s) 659, 714, 1100
HpyCH4III ACNGT 2 cut(s) 1089, 1234
HpyCH4IV ACGT 4 cut(s) 466, 591, 903, 1578
HpyCH4V TGCA 6 cut(s) 93, 181, 472, 576, 624, 992
HpyF10VI GCNNNNNNNGC 2 cut(s) 157, 299
HpyF3I CTNAG 7 cut(s) 428, 455, 710, 1018, 1184, 1329, 1550
HpySE526I ACGT 4 cut(s) 466, 591, 903, 1578
Hsp92I GRCGYC 1 cut(s) 273
Hsp92II CATG 9 cut(s) 156, 239, 250, 326, 1063, 1358, 1435, 1453, 1534
HspAI GCGC 2 cut(s) 338, 459
KroI GCCGGC 1 cut(s) 1409
KroNI GCCGGC 1 cut(s) 1411
Ksp22I TGATCA 2 cut(s) 12, 834
KspAI GTTAAC 1 cut(s) 1447
LguI GCTCTTC 1 cut(s) 1366
LmnI GCTCC 1 cut(s) 1215
Lsp1109I GCAGC 6 cut(s) 147, 286, 371, 560, 588, 617
LweI GCATC 2 cut(s) 102, 1315
MaeI CTAG 1 cut(s) 846
MaeII ACGT 4 cut(s) 466, 591, 903, 1578
MaeIII GTNAC 2 cut(s) 138, 1188
MflI RGATCY 2 cut(s) 482, 815
MhlI GDGCHC 1 cut(s) 1072
MlsI TGGCCA 1 cut(s) 227
MluNI TGGCCA 1 cut(s) 227
MlyI GAGTC 1 cut(s) 1622
MmeI TCCRAC 1 cut(s) 951
Mox20I TGGCCA 1 cut(s) 227
MroNI GCCGGC 1 cut(s) 1409
MscI TGGCCA 1 cut(s) 227
MseI TTAA 8 cut(s) 255, 918, 1143, 1263, 1281, 1338, 1374, 1446
MslI CAYNNNNRTG 1 cut(s) 98
Msp20I TGGCCA 1 cut(s) 227
MspI CCGG 4 cut(s) 126, 147, 1307, 1410
MspR9I CCNGG 7 cut(s) 98, 147, 148, 305, 1200, 1307, 1428
Mva1269I GAATGC 1 cut(s) 1573
MvaI CCWGG 4 cut(s) 98, 305, 1200, 1428
MwoI GCNNNNNNNGC 2 cut(s) 157, 299
NaeI GCCGGC 1 cut(s) 1411
NciI CCSGG 3 cut(s) 147, 148, 1307
NcoI CCATGG 1 cut(s) 152
NgoMIV GCCGGC 1 cut(s) 1409
NlaIII CATG 9 cut(s) 156, 239, 250, 326, 1063, 1358, 1435, 1453, 1534
NlaIV GGNNCC 3 cut(s) 241, 484, 1408
NmeAIII GCCGAG 1 cut(s) 1587
NmuCI GTSAC 1 cut(s) 138
NsbI TGCGCA 1 cut(s) 339
NspI RCATGY 1 cut(s) 1435
PagI TCATGA 1 cut(s) 1059
PceI AGGCCT 2 cut(s) 132, 346
PciSI GCTCTTC 1 cut(s) 1366
PctI GAATGC 1 cut(s) 1573
PdiI GCCGGC 1 cut(s) 1411
PfeI GAWTC 6 cut(s) 508, 778, 923, 1056, 1248, 1513
PflMI CCANNNNNTGG 1 cut(s) 214
PkrI GCNGC 6 cut(s) 162, 301, 361, 575, 578, 607
PleI GAGTC 1 cut(s) 1621
PpsI GAGTC 1 cut(s) 1621
Ppu21I YACGTR 1 cut(s) 1579
PshBI ATTAAT 1 cut(s) 1281
Psp6I CCWGG 4 cut(s) 96, 303, 1198, 1426
PspGI CCWGG 4 cut(s) 96, 303, 1198, 1426
PspN4I GGNNCC 3 cut(s) 241, 484, 1408
PspPI GGNCC 5 cut(s) 149, 194, 239, 1202, 1407
PstI CTGCAG 2 cut(s) 578, 994
PstNI CAGNNNCTG 2 cut(s) 573, 1328
PsuI RGATCY 2 cut(s) 482, 815
RsaI GTAC 6 cut(s) 251, 844, 850, 906, 1257, 1577
RsaNI GTAC 6 cut(s) 250, 843, 849, 905, 1256, 1576
RseI CAYNNNNRTG 1 cut(s) 98
Rsr2I CGGWCCG 1 cut(s) 194
RsrII CGGWCCG 1 cut(s) 194
SapI GCTCTTC 1 cut(s) 1366
SaqAI TTAA 8 cut(s) 255, 918, 1143, 1263, 1281, 1338, 1374, 1446
SatI GCNGC 6 cut(s) 161, 300, 360, 574, 577, 606
Sau96I GGNCC 5 cut(s) 149, 194, 239, 1202, 1407
SchI GAGTC 1 cut(s) 1622
ScrFI CCNGG 7 cut(s) 98, 147, 148, 305, 1200, 1307, 1428
SduI GDGCHC 1 cut(s) 1072
SfaNI GCATC 2 cut(s) 102, 1315
SfcI CTRYAG 4 cut(s) 574, 855, 990, 1555
SinI GGWCC 2 cut(s) 194, 239
SmaI CCCGGG 1 cut(s) 148
SmiMI CAYNNNNRTG 1 cut(s) 98
SmlI CTYRAG 1 cut(s) 1071
SmoI CTYRAG 1 cut(s) 1071
SnaBI TACGTA 1 cut(s) 1579
SpeI ACTAGT 1 cut(s) 845
SseBI AGGCCT 2 cut(s) 132, 346
SsiI CCGC 2 cut(s) 1245, 1483
SspMI CTAG 1 cut(s) 846
StuI AGGCCT 2 cut(s) 132, 346
StyD4I CCNGG 7 cut(s) 96, 145, 146, 303, 1198, 1305, 1426
StyI CCWWGG 1 cut(s) 152
TaaI ACNGT 2 cut(s) 1089, 1234
TaiI ACGT 4 cut(s) 469, 594, 906, 1581
TaqI TCGA 4 cut(s) 447, 737, 783, 1488
TaqII GACCGA 1 cut(s) 182
TfiI GAWTC 6 cut(s) 508, 778, 923, 1056, 1248, 1513
Tru1I TTAA 8 cut(s) 255, 918, 1143, 1263, 1281, 1338, 1374, 1446
Tru9I TTAA 8 cut(s) 255, 918, 1143, 1263, 1281, 1338, 1374, 1446
TscAI CASTG 2 cut(s) 219, 844
TseFI GTSAC 1 cut(s) 138
TseI GCWGC 6 cut(s) 160, 299, 359, 573, 576, 605
Tsp45I GTSAC 1 cut(s) 138
TspDTI ATGAA 6 cut(s) 20, 276, 715, 1076, 1343, 1526
TspGWI ACGGA 3 cut(s) 186, 475, 1389
TspMI CCCGGG 1 cut(s) 146
TspRI CASTG 2 cut(s) 219, 844
Van91I CCANNNNNTGG 1 cut(s) 214
VpaK11BI GGWCC 2 cut(s) 194, 239
VspI ATTAAT 1 cut(s) 1281
XceI RCATGY 1 cut(s) 1435
XmaI CCCGGG 1 cut(s) 146
XspI CTAG 1 cut(s) 846
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.