Prupe.4G238200_v2.0.a1

Cytochrome p450

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
15592949 .. 15593524
576 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G238200.1

Sequence Viewer

Length: 576 bp
ATGATAAAAAATCCAAGAGTAATGAACATGGCACAGAATGAGGTGAGGGAAGTGTTTAATAGAAAAGGACAGGTAGATGAAACATGCATTAGAGAGATGAAATATTTAAATTTAGTTATCAAGGAGACACTGAGGTTGCACCCCCCGGCTCCCCTGTTACTTCCAAGAGAATGTGGAGAGAAATGTGAGATTGATGGATATGAAATACCTGTGAAATCCAAGGTAATTGTGAATGCATGGGCAATTGGTAGAGATCCCAATTACTGGAATGAGCCTGAGAGCTTTAATCCCAATAGGTTCCTTGATAACTCGATTGACTACAAGGGAACAAACTTTGAATATATCCCATTTGGTGCTGGAAGGAGAATGTGCCCTGGCGTGTCATTTGGTCTGGCCAACGTTGAGCTCCCACTTGCATTGTTGTTATACCATTTTGATTGGAAACTCCCCAATGGGATGAAGCATGAGGACCTGGACATGACTGAGGCCTTTGGCGCTACAGTCAAAAGAAAAGACGATCTGCACTTGATTCCCATTCCTTATCATCCTCCGTCTACTGAAAAATCCCAAGTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

192

Amino Acids

22.01

Weight (kDa)

6.22

Isoelectric Point (pI)

27.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 264
AccI GTMKAC 1 cut(s) 554
AclI AACGTT 1 cut(s) 399
AclWI GGATC 1 cut(s) 248
AcoI YGGCCR 1 cut(s) 393
AcsI RAATTY 1 cut(s) 109
AfiI CCNNNNNNNGG 1 cut(s) 264
AgsI TTSAA 1 cut(s) 338
AjnI CCWGG 2 cut(s) 373, 471
AluBI AGCT 2 cut(s) 282, 406
AluI AGCT 2 cut(s) 282, 406
Alw21I GWGCWC 1 cut(s) 408
Alw26I GTCTC 1 cut(s) 119
AlwI GGATC 1 cut(s) 248
AoxI GGCC 2 cut(s) 393, 486
ApoI RAATTY 1 cut(s) 109
AspLEI GCGC 1 cut(s) 497
AspS9I GGNCC 1 cut(s) 469
AsuC2I CCSGG 1 cut(s) 146
AsuHPI GGTGA 1 cut(s) 55
AvaII GGWCC 1 cut(s) 469
BaeGI GKGCMC 1 cut(s) 374
BalI TGGCCA 1 cut(s) 395
BanII GRGCYC 1 cut(s) 408
Bbv12I GWGCWC 1 cut(s) 408
BccI CCATC 1 cut(s) 188
BciT130I CCWGG 2 cut(s) 375, 473
BcnI CCSGG 1 cut(s) 146
BcoDI GTCTC 1 cut(s) 119
BfmI CTRYAG 1 cut(s) 498
BfoI RGCGCY 1 cut(s) 498
Bme1390I CCNGG 3 cut(s) 146, 375, 473
Bme18I GGWCC 1 cut(s) 469
BmgT120I GGNCC 1 cut(s) 469
BmiI GGNNCC 2 cut(s) 150, 299
BmrFI CCNGG 3 cut(s) 146, 375, 473
BpuMI CCSGG 1 cut(s) 146
BsaJI CCNNGG 3 cut(s) 144, 219, 373
Bsc4I CCNNNNNNNGG 1 cut(s) 264
Bse1I ACTGG 1 cut(s) 269
BseBI CCWGG 2 cut(s) 375, 473
BseDI CCNNGG 3 cut(s) 144, 219, 373
BseGI GGATG 2 cut(s) 462, 544
BseLI CCNNNNNNNGG 1 cut(s) 264
BseMII CTCAG 3 cut(s) 122, 267, 474
BseNI ACTGG 1 cut(s) 269
BseSI GKGCMC 1 cut(s) 374
BsgI GTGCAG 1 cut(s) 506
BshFI GGCC 2 cut(s) 395, 488
BsiHKAI GWGCWC 1 cut(s) 408
BsiSI CCGG 1 cut(s) 146
BslI CCNNNNNNNGG 1 cut(s) 264
BsmAI GTCTC 1 cut(s) 119
BsmI GAATGC 1 cut(s) 238
BsnI GGCC 2 cut(s) 395, 488
Bsp1286I GDGCHC 2 cut(s) 374, 408
Bsp143I GATC 2 cut(s) 253, 517
BspANI GGCC 2 cut(s) 395, 488
BspCNI CTCAG 3 cut(s) 123, 268, 475
BspLI GGNNCC 2 cut(s) 150, 299
BspPI GGATC 1 cut(s) 248
BsrI ACTGG 1 cut(s) 269
BssECI CCNNGG 3 cut(s) 144, 219, 373
BssMI GATC 2 cut(s) 253, 517
BssT1I CCWWGG 1 cut(s) 219
Bst2UI CCWGG 2 cut(s) 375, 473
Bst4CI ACNGT 1 cut(s) 502
BstDEI CTNAG 3 cut(s) 131, 276, 483
BstF5I GGATG 2 cut(s) 462, 544
BstH2I RGCGCY 1 cut(s) 498
BstHHI GCGC 1 cut(s) 497
BstKTI GATC 2 cut(s) 256, 520
BstMAI GTCTC 1 cut(s) 119
BstMBI GATC 2 cut(s) 253, 517
BstMWI GCNNNNNNNGC 1 cut(s) 494
BstNI CCWGG 2 cut(s) 375, 473
BstNSI RCATGY 1 cut(s) 87
BstSCI CCNGG 3 cut(s) 144, 373, 471
BstSFI CTRYAG 1 cut(s) 498
BstSLI GKGCMC 1 cut(s) 374
BstX2I RGATCY 1 cut(s) 253
BstYI RGATCY 1 cut(s) 253
BsuRI GGCC 2 cut(s) 395, 488
BtsCI GGATG 2 cut(s) 462, 544
BtsIMutI CAGTG 1 cut(s) 128
CfoI GCGC 1 cut(s) 497
Cfr13I GGNCC 1 cut(s) 469
CspCI CAANNNNNGTGG 2 cut(s) 399, 434
CviAII CATG 5 cut(s) 28, 84, 237, 464, 478
CviJI RGCY 6 cut(s) 149, 274, 282, 395, 406, 488
CviKI_1 RGCY 6 cut(s) 149, 274, 282, 395, 406, 488
DdeI CTNAG 3 cut(s) 131, 276, 483
DpnI GATC 2 cut(s) 255, 519
DpnII GATC 2 cut(s) 253, 517
DraI TTTAAA 1 cut(s) 108
EaeI YGGCCR 1 cut(s) 393
Ecl136II GAGCTC 1 cut(s) 406
Eco130I CCWWGG 1 cut(s) 219
Eco147I AGGCCT 1 cut(s) 488
Eco24I GRGCYC 1 cut(s) 408
Eco47I GGWCC 1 cut(s) 469
Eco53kI GAGCTC 1 cut(s) 406
EcoICRI GAGCTC 1 cut(s) 406
EcoO109I RGGNCCY 1 cut(s) 469
EcoRII CCWGG 2 cut(s) 373, 471
EcoT14I CCWWGG 1 cut(s) 219
EcoT22I ATGCAT 2 cut(s) 89, 238
EcoT38I GRGCYC 1 cut(s) 408
ErhI CCWWGG 1 cut(s) 219
FaeI CATG 5 cut(s) 31, 87, 240, 467, 481
FaiI YATR 9 cut(s) 29, 85, 201, 238, 342, 427, 465, 479, 574
FatI CATG 5 cut(s) 27, 83, 236, 463, 477
FblI GTMKAC 1 cut(s) 554
FokI GGATG 2 cut(s) 469, 531
FriOI GRGCYC 1 cut(s) 408
GlaI GCGC 1 cut(s) 496
HaeII RGCGCY 1 cut(s) 498
HaeIII GGCC 2 cut(s) 395, 488
HapII CCGG 1 cut(s) 146
HhaI GCGC 1 cut(s) 497
Hin1II CATG 5 cut(s) 31, 87, 240, 467, 481
Hin6I GCGC 1 cut(s) 495
HinP1I GCGC 1 cut(s) 495
HinfI GANTC 1 cut(s) 529
HpaII CCGG 1 cut(s) 146
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 1 cut(s) 555
Hpy8I GTNNAC 1 cut(s) 555
HpyAV CCTTC 1 cut(s) 354
HpyCH4III ACNGT 1 cut(s) 502
HpyCH4IV ACGT 1 cut(s) 399
HpyCH4V TGCA 5 cut(s) 87, 139, 236, 416, 523
HpyF10VI GCNNNNNNNGC 1 cut(s) 494
HpyF3I CTNAG 3 cut(s) 131, 276, 483
HpySE526I ACGT 1 cut(s) 399
Hsp92II CATG 5 cut(s) 31, 87, 240, 467, 481
HspAI GCGC 1 cut(s) 495
Kzo9I GATC 2 cut(s) 253, 517
LmnI GCTCC 2 cut(s) 154, 411
MaeII ACGT 1 cut(s) 399
MaeIII GTNAC 1 cut(s) 156
MalI GATC 2 cut(s) 255, 519
MboI GATC 2 cut(s) 253, 517
MfeI CAATTG 1 cut(s) 243
MflI RGATCY 1 cut(s) 253
MhlI GDGCHC 2 cut(s) 374, 408
MlsI TGGCCA 1 cut(s) 395
MluCI AATT 4 cut(s) 109, 225, 243, 259
MluNI TGGCCA 1 cut(s) 395
MnlI CCTC 6 cut(s) 34, 39, 126, 460, 478, 558
Mox20I TGGCCA 1 cut(s) 395
Mph1103I ATGCAT 2 cut(s) 89, 238
MscI TGGCCA 1 cut(s) 395
MseI TTAA 3 cut(s) 57, 107, 285
Msp20I TGGCCA 1 cut(s) 395
MspI CCGG 1 cut(s) 146
MspR9I CCNGG 3 cut(s) 146, 375, 473
MunI CAATTG 1 cut(s) 243
Mva1269I GAATGC 1 cut(s) 238
MvaI CCWGG 2 cut(s) 375, 473
MwoI GCNNNNNNNGC 1 cut(s) 494
NciI CCSGG 1 cut(s) 146
NdeII GATC 2 cut(s) 253, 517
NlaIII CATG 5 cut(s) 31, 87, 240, 467, 481
NlaIV GGNNCC 2 cut(s) 150, 299
NsiI ATGCAT 2 cut(s) 89, 238
NspI RCATGY 1 cut(s) 87
PceI AGGCCT 1 cut(s) 488
PctI GAATGC 1 cut(s) 238
PfeI GAWTC 1 cut(s) 529
PflMI CCANNNNNTGG 1 cut(s) 264
PpuMI RGGWCCY 1 cut(s) 469
Psp124BI GAGCTC 1 cut(s) 408
Psp1406I AACGTT 1 cut(s) 399
Psp5II RGGWCCY 1 cut(s) 469
Psp6I CCWGG 2 cut(s) 373, 471
PspGI CCWGG 2 cut(s) 373, 471
PspN4I GGNNCC 2 cut(s) 150, 299
PspPI GGNCC 1 cut(s) 469
PspPPI RGGWCCY 1 cut(s) 469
PsuI RGATCY 1 cut(s) 253
SacI GAGCTC 1 cut(s) 408
SaqAI TTAA 3 cut(s) 57, 107, 285
Sau3AI GATC 2 cut(s) 253, 517
Sau96I GGNCC 1 cut(s) 469
ScrFI CCNGG 3 cut(s) 146, 375, 473
SduI GDGCHC 2 cut(s) 374, 408
SfcI CTRYAG 1 cut(s) 498
SinI GGWCC 1 cut(s) 469
SmiI ATTTAAAT 1 cut(s) 108
Sse9I AATT 4 cut(s) 109, 225, 243, 259
SseBI AGGCCT 1 cut(s) 488
SspI AATATT 1 cut(s) 104
SstI GAGCTC 1 cut(s) 408
StuI AGGCCT 1 cut(s) 488
StyD4I CCNGG 3 cut(s) 144, 373, 471
StyI CCWWGG 1 cut(s) 219
SwaI ATTTAAAT 1 cut(s) 108
TaaI ACNGT 1 cut(s) 502
TaiI ACGT 1 cut(s) 402
TaqI TCGA 1 cut(s) 311
TasI AATT 4 cut(s) 109, 225, 243, 259
TfiI GAWTC 1 cut(s) 529
Tru1I TTAA 3 cut(s) 57, 107, 285
Tru9I TTAA 3 cut(s) 57, 107, 285
TscAI CASTG 1 cut(s) 135
TspDTI ATGAA 5 cut(s) 38, 93, 113, 216, 473
TspGWI ACGGA 1 cut(s) 540
TspRI CASTG 1 cut(s) 135
Van91I CCANNNNNTGG 1 cut(s) 264
VpaK11BI GGWCC 1 cut(s) 469
XapI RAATTY 1 cut(s) 109
XceI RCATGY 1 cut(s) 87
XmiI GTMKAC 1 cut(s) 554
Zsp2I ATGCAT 2 cut(s) 89, 238
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.