Rw2G004130

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000132
Physical Location & Seq
Forward (+)
3924824 .. 3928234
3411 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G004130.1

Sequence Viewer

Length: 1539 bp
ATGGAGCTGCTTCAATCTCCTTCCTTACAAGCTCTGCTTATATTTTCTCTCTTTCTCATTGCACTACTGAAAATAGCCAAGCGAGGCAAAACCAAAAACTCCACTTCAAACTTACCCCCAGGACCATGGAAGCTACCCATCATAGGAAACTTACACCAGCTCGTTGGCTCTCTACCCCATCACGGCCTCAGAGACTTGGCTGAGATATATGGACCTCTTATGTATTTGATGCTTGGAGAAGTTCCAACCCTAGTTGTTTCATCAGCAGAGTGCGCCAAGGAGGTGATGAAAACTCACGACGCCATCTTTGCGTTAAGACCCCATACCCTTGCTACCAGAATCTTGAGTTACCGTGGTACAACAATTGGTTTTTCACCAGATGGTGAATACTGGAGACAACTACGAAAAATTTGCACACTAGAGCTTTTAAGCACAAAGCGTGTCCGATCTTTTCAACGAATTAGGGAAGAAGAGGTCTTGAAACTCATTAAAAGGATTGCATCAAGGCCAGGATCACCCATCAATCTCACTGAGGAAATCTACTTATGCACATACCGCATAACTTCGAGAGCAGCCTTTGGTAAAAAAAGTGTAAACCATGAAAAAGCCATACATATTGGGAAGGAAGCTGTAAAAGTGGCAGGAGGCTTTGCACTTGCAGATGTTTTCCCTTCTGTCAAGTTGCTGCATGTGATTAGTGGAATGAGAGCTAAACTCGAGAAGCTGCATAAGGAAGCTGACATGATATTGGAAAATATCATCAAAGAACATAAAGAAGGCAAGACAACAACAAAATCTCAGGGCGAGGGTGAAGTAGAGGAAGACTTGATAGATGTACTCTTAAAGTATCACGATCATAGTTGCCTGAAGTTTTCCCTAACTGTTGAAAACATCAAAGCTGTAATCCAGGACATCTTTGGTGCTGGGAGTGAGACATCATCCACAACTGTGGATTGGTTAATGGCAGAGATGATAAAGAATCCAAGAACAATGAAAATAGCACAAGATGAGGTGAGAGAAGTTTTTAACAGAAAAGGGCATGTAGATGAAACTGGCATCAAGGATATGAAATATTTGAACTTAGTTATCAAAGAGACATTGAGATTACACCCTGCTGCTCCCTTTCTACTTCCAAGAGAATGCAGAGAGACTTGTGAGATAGCTGGATATAAAATACCAGTCAAAACAAAGGTAGTTATTAATGCATGGGCAATTGGTAGAGATGCAAAGTACTGGACGGAGCCTGAAATCTTTTATCCTGAGCGGTTCCTTGATAGCTCTATTGACTACAAAGGAACCAATTTTGAATATATCCCTTTTGGTGCTGGAAGGAGAATATGTCCCGGCATAGCCTATGGTCTGGCGAATGTGGAGCTCCCAGTTGCTTTGTTGTTGTACCATTTTGATTGGAAACTCCCCTATGAAATGAAGAATGAAGACCTGGACATGACTGAGGATTTCGGTATTACCGTTCGCAGAAAAGAAGATTTACACTTGGTTCCCACTCCCTATTGTCCTGCACCAATTACAAGACCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

512

Amino Acids

57.99

Weight (kDa)

8.76

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 39 - 494 3.2e-95 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1264
AciI CCGC 2 cut(s) 556, 1264
AclWI GGATC 1 cut(s) 520
AcsI RAATTY 1 cut(s) 408
AcuI CTGAAG 1 cut(s) 887
AcyI GRCGYC 1 cut(s) 300
AfaI GTAC 4 cut(s) 358, 837, 1232, 1397
AfiI CCNNNNNNNGG 2 cut(s) 143, 182
AgsI TTSAA 7 cut(s) 14, 108, 455, 481, 887, 1078, 1307
AjnI CCWGG 4 cut(s) 118, 508, 906, 1440
AleI CACNNNNGTG 1 cut(s) 947
Alw21I GWGCWC 1 cut(s) 1377
Alw26I GTCTC 5 cut(s) 186, 388, 926, 1088, 1142
AlwI GGATC 1 cut(s) 520
Ama87I CYCGRG 1 cut(s) 716
AoxI GGCC 2 cut(s) 184, 506
ApeKI GCWGC 5 cut(s) 7, 572, 685, 724, 1115
ApoI RAATTY 1 cut(s) 408
ArsI GACNNNNNNTTYG 2 cut(s) 290, 322
AseI ATTAAT 1 cut(s) 1200
AspLEI GCGC 1 cut(s) 275
AspS9I GGNCC 2 cut(s) 122, 212
AsuC2I CCSGG 1 cut(s) 1344
AsuHPI GGTGA 6 cut(s) 295, 366, 395, 507, 821, 1024
AvaI CYCGRG 1 cut(s) 716
AvaII GGWCC 2 cut(s) 122, 212
BanII GRGCYC 1 cut(s) 1377
BbsI GAAGAC 2 cut(s) 828, 1443
Bbv12I GWGCWC 1 cut(s) 1377
BbvI GCAGC 4 cut(s) 584, 672, 711, 1102
BccI CCATC 5 cut(s) 146, 186, 311, 374, 527
BceAI ACGGC 1 cut(s) 199
BcgI CGANNNNNNTGC 2 cut(s) 393, 427
BciT130I CCWGG 4 cut(s) 120, 510, 908, 1442
BcnI CCSGG 1 cut(s) 1344
BcoDI GTCTC 5 cut(s) 186, 388, 926, 1088, 1142
BfaI CTAG 2 cut(s) 251, 419
BisI GCNGC 5 cut(s) 8, 573, 686, 725, 1116
BlsI GCNGC 5 cut(s) 9, 574, 687, 726, 1117
BmcAI AGTACT 1 cut(s) 1232
Bme1390I CCNGG 5 cut(s) 120, 510, 908, 1344, 1442
Bme18I GGWCC 2 cut(s) 122, 212
BmeT110I CYCGRG 1 cut(s) 716
BmgT120I GGNCC 2 cut(s) 122, 212
BmiI GGNNCC 4 cut(s) 1242, 1268, 1297, 1500
BmrFI CCNGG 5 cut(s) 120, 510, 908, 1344, 1442
BmrI ACTGGG 1 cut(s) 1373
BmsI GCATC 4 cut(s) 219, 509, 1065, 1213
BmuI ACTGGG 1 cut(s) 1373
BpiI GAAGAC 2 cut(s) 828, 1443
BplI GAGNNNNNCTC 2 cut(s) 699, 731
BpmI CTGGAG 1 cut(s) 412
Bpu10I CCTNAGC 1 cut(s) 1260
BpuEI CTTGAG 1 cut(s) 364
BpuMI CCSGG 1 cut(s) 1344
BsaHI GRCGYC 1 cut(s) 300
BsaJI CCNNGG 4 cut(s) 118, 125, 276, 352
BsaXI ACNNNNNCTCC 2 cut(s) 1324, 1354
Bsc4I CCNNNNNNNGG 2 cut(s) 143, 182
Bse1I ACTGG 5 cut(s) 395, 1057, 1178, 1238, 1379
Bse3DI GCAATG 1 cut(s) 57
BseBI CCWGG 4 cut(s) 120, 510, 908, 1442
BseDI CCNNGG 4 cut(s) 118, 125, 276, 352
BseGI GGATG 1 cut(s) 938
BseLI CCNNNNNNNGG 2 cut(s) 143, 182
BseMI GCAATG 1 cut(s) 57
BseMII CTCAG 6 cut(s) 192, 202, 522, 812, 1251, 1443
BseNI ACTGG 5 cut(s) 395, 1057, 1178, 1238, 1379
BseXI GCAGC 4 cut(s) 584, 672, 711, 1102
BseYI CCCAGC 1 cut(s) 923
BsgI GTGCAG 1 cut(s) 1503
BshFI GGCC 2 cut(s) 186, 508
BsiHKAI GWGCWC 1 cut(s) 1377
BsiHKCI CYCGRG 1 cut(s) 716
BsiSI CCGG 1 cut(s) 1344
BslFI GGGAC 1 cut(s) 1326
BslI CCNNNNNNNGG 2 cut(s) 143, 182
BsmAI GTCTC 5 cut(s) 186, 388, 926, 1088, 1142
BsmFI GGGAC 1 cut(s) 1326
BsmI GAATGC 1 cut(s) 1145
BsnI GGCC 2 cut(s) 186, 508
BsoBI CYCGRG 1 cut(s) 716
Bsp1286I GDGCHC 1 cut(s) 1377
Bsp143I GATC 3 cut(s) 446, 512, 853
Bsp19I CCATGG 1 cut(s) 125
BspACI CCGC 2 cut(s) 556, 1264
BspANI GGCC 2 cut(s) 186, 508
BspCNI CTCAG 6 cut(s) 193, 201, 523, 811, 1252, 1444
BspLI GGNNCC 4 cut(s) 1242, 1268, 1297, 1500
BspPI GGATC 1 cut(s) 520
BsrBI CCGCTC 1 cut(s) 1264
BsrDI GCAATG 1 cut(s) 57
BsrI ACTGG 5 cut(s) 395, 1057, 1178, 1238, 1379
BssECI CCNNGG 4 cut(s) 118, 125, 276, 352
BssMI GATC 3 cut(s) 446, 512, 853
BssNI GRCGYC 1 cut(s) 300
BssT1I CCWWGG 2 cut(s) 125, 276
Bst2UI CCWGG 4 cut(s) 120, 510, 908, 1442
Bst4CI ACNGT 4 cut(s) 353, 883, 949, 1471
Bst6I CTCTTC 1 cut(s) 465
BstACI GRCGYC 1 cut(s) 300
BstDEI CTNAG 7 cut(s) 188, 201, 531, 798, 1081, 1260, 1452
BstDSI CCRYGG 2 cut(s) 125, 352
BstF5I GGATG 1 cut(s) 938
BstHHI GCGC 1 cut(s) 275
BstKTI GATC 3 cut(s) 449, 515, 856
BstMAI GTCTC 5 cut(s) 186, 388, 926, 1088, 1142
BstMBI GATC 3 cut(s) 446, 512, 853
BstMWI GCNNNNNNNGC 3 cut(s) 272, 308, 555
BstNI CCWGG 4 cut(s) 120, 510, 908, 1442
BstNSI RCATGY 2 cut(s) 692, 1043
BstSCI CCNGG 5 cut(s) 118, 508, 906, 1342, 1440
BstV1I GCAGC 4 cut(s) 584, 672, 711, 1102
BstV2I GAAGAC 2 cut(s) 828, 1443
BstXI CCANNNNNNTGG 3 cut(s) 126, 164, 949
BsuRI GGCC 2 cut(s) 186, 508
BtgI CCRYGG 2 cut(s) 125, 352
BtsCI GGATG 1 cut(s) 938
BtsIMutI CAGTG 1 cut(s) 528
CfoI GCGC 1 cut(s) 275
Cfr13I GGNCC 2 cut(s) 122, 212
CseI GACGC 1 cut(s) 308
Csp6I GTAC 4 cut(s) 357, 836, 1231, 1396
CviAII CATG 7 cut(s) 126, 599, 689, 742, 1040, 1206, 1447
CviQI GTAC 4 cut(s) 357, 836, 1231, 1396
DdeI CTNAG 7 cut(s) 188, 201, 531, 798, 1081, 1260, 1452
DpnI GATC 3 cut(s) 448, 514, 855
DpnII GATC 3 cut(s) 446, 512, 853
Eam1104I CTCTTC 1 cut(s) 465
EarI CTCTTC 1 cut(s) 465
Ecl136II GAGCTC 1 cut(s) 1375
Eco130I CCWWGG 2 cut(s) 125, 276
Eco24I GRGCYC 1 cut(s) 1377
Eco47I GGWCC 2 cut(s) 122, 212
Eco53kI GAGCTC 1 cut(s) 1375
Eco57I CTGAAG 1 cut(s) 887
Eco88I CYCGRG 1 cut(s) 716
EcoICRI GAGCTC 1 cut(s) 1375
EcoRII CCWGG 4 cut(s) 118, 508, 906, 1440
EcoT14I CCWWGG 2 cut(s) 125, 276
EcoT22I ATGCAT 1 cut(s) 1207
EcoT38I GRGCYC 1 cut(s) 1377
ErhI CCWWGG 2 cut(s) 125, 276
FaeI CATG 7 cut(s) 129, 602, 692, 745, 1043, 1209, 1450
FalI AAGNNNNNCTT 2 cut(s) 21, 53
FaqI GGGAC 1 cut(s) 1326
FatI CATG 7 cut(s) 125, 598, 688, 741, 1039, 1205, 1446
Fnu4HI GCNGC 5 cut(s) 8, 573, 686, 725, 1116
FokI GGATG 1 cut(s) 925
FriOI GRGCYC 1 cut(s) 1377
Fsp4HI GCNGC 5 cut(s) 8, 573, 686, 725, 1116
FspBI CTAG 2 cut(s) 251, 419
GlaI GCGC 1 cut(s) 274
GluI GCNGC 5 cut(s) 8, 573, 686, 725, 1116
GsaI CCCAGC 1 cut(s) 927
GsuI CTGGAG 1 cut(s) 412
HaeIII GGCC 2 cut(s) 186, 508
HapII CCGG 1 cut(s) 1344
HgaI GACGC 1 cut(s) 308
HhaI GCGC 1 cut(s) 275
Hin1I GRCGYC 1 cut(s) 300
Hin1II CATG 7 cut(s) 129, 602, 692, 745, 1043, 1209, 1450
Hin6I GCGC 1 cut(s) 273
HinP1I GCGC 1 cut(s) 273
HinfI GANTC 2 cut(s) 339, 979
HpaII CCGG 1 cut(s) 1344
HphI GGTGA 6 cut(s) 295, 366, 395, 507, 821, 1024
Hpy166II GTNNAC 1 cut(s) 595
Hpy188I TCNGA 2 cut(s) 191, 446
Hpy188III TCNNGA 7 cut(s) 296, 343, 478, 567, 718, 851, 1259
Hpy8I GTNNAC 1 cut(s) 595
Hpy99I CGWCG 1 cut(s) 302
HpyAV CCTTC 5 cut(s) 30, 616, 681, 770, 1323
HpyCH4III ACNGT 4 cut(s) 353, 883, 949, 1471
HpyF10VI GCNNNNNNNGC 3 cut(s) 272, 308, 555
HpyF3I CTNAG 7 cut(s) 188, 201, 531, 798, 1081, 1260, 1452
Hsp92I GRCGYC 1 cut(s) 300
Hsp92II CATG 7 cut(s) 129, 602, 692, 745, 1043, 1209, 1450
HspAI GCGC 1 cut(s) 273
Kzo9I GATC 3 cut(s) 446, 512, 853
LmnI GCTCC 5 cut(s) 4, 1123, 1240, 1372, 1380
Lsp1109I GCAGC 4 cut(s) 584, 672, 711, 1102
LweI GCATC 4 cut(s) 219, 509, 1065, 1213
MaeI CTAG 2 cut(s) 251, 419
MaeIII GTNAC 1 cut(s) 347
MalI GATC 3 cut(s) 448, 514, 855
MbiI CCGCTC 1 cut(s) 1264
MboI GATC 3 cut(s) 446, 512, 853
MboII GAAGA 6 cut(s) 479, 482, 833, 1441, 1448, 1496
MfeI CAATTG 2 cut(s) 363, 1212
MhlI GDGCHC 1 cut(s) 1377
MluCI AATT 6 cut(s) 363, 408, 459, 1212, 1300, 1524
MmeI TCCRAC 1 cut(s) 269
Mph1103I ATGCAT 1 cut(s) 1207
MseI TTAA 7 cut(s) 314, 428, 489, 842, 959, 1026, 1200
MslI CAYNNNNRTG 2 cut(s) 947, 1044
MspI CCGG 1 cut(s) 1344
MspR9I CCNGG 5 cut(s) 120, 510, 908, 1344, 1442
MunI CAATTG 2 cut(s) 363, 1212
Mva1269I GAATGC 1 cut(s) 1145
MvaI CCWGG 4 cut(s) 120, 510, 908, 1442
MwoI GCNNNNNNNGC 3 cut(s) 272, 308, 555
NciI CCSGG 1 cut(s) 1344
NcoI CCATGG 1 cut(s) 125
NdeII GATC 3 cut(s) 446, 512, 853
NlaIII CATG 7 cut(s) 129, 602, 692, 745, 1043, 1209, 1450
NlaIV GGNNCC 4 cut(s) 1242, 1268, 1297, 1500
NsiI ATGCAT 1 cut(s) 1207
NspI RCATGY 2 cut(s) 692, 1043
OliI CACNNNNGTG 1 cut(s) 947
PaeR7I CTCGAG 1 cut(s) 716
PcsI WCGNNNNNNNCGW 1 cut(s) 1467
PctI GAATGC 1 cut(s) 1145
PfeI GAWTC 2 cut(s) 339, 979
PfoI TCCNGGA 1 cut(s) 906
PkrI GCNGC 5 cut(s) 9, 574, 687, 726, 1117
PshBI ATTAAT 1 cut(s) 1200
Psp124BI GAGCTC 1 cut(s) 1377
Psp6I CCWGG 4 cut(s) 118, 508, 906, 1440
PspFI CCCAGC 1 cut(s) 923
PspGI CCWGG 4 cut(s) 118, 508, 906, 1440
PspN4I GGNNCC 4 cut(s) 1242, 1268, 1297, 1500
PspPI GGNCC 2 cut(s) 122, 212
RsaI GTAC 4 cut(s) 358, 837, 1232, 1397
RsaNI GTAC 4 cut(s) 357, 836, 1231, 1396
RseI CAYNNNNRTG 2 cut(s) 947, 1044
SacI GAGCTC 1 cut(s) 1377
SaqAI TTAA 7 cut(s) 314, 428, 489, 842, 959, 1026, 1200
SatI GCNGC 5 cut(s) 8, 573, 686, 725, 1116
Sau3AI GATC 3 cut(s) 446, 512, 853
Sau96I GGNCC 2 cut(s) 122, 212
ScaI AGTACT 1 cut(s) 1232
ScrFI CCNGG 5 cut(s) 120, 510, 908, 1344, 1442
SduI GDGCHC 1 cut(s) 1377
SfaNI GCATC 4 cut(s) 219, 509, 1065, 1213
Sfr274I CTCGAG 1 cut(s) 716
SinI GGWCC 2 cut(s) 122, 212
SlaI CTCGAG 1 cut(s) 716
SmiMI CAYNNNNRTG 2 cut(s) 947, 1044
SmlI CTYRAG 2 cut(s) 343, 716
SmoI CTYRAG 2 cut(s) 343, 716
Sse9I AATT 6 cut(s) 363, 408, 459, 1212, 1300, 1524
SsiI CCGC 2 cut(s) 556, 1264
SspI AATATT 1 cut(s) 1073
SspMI CTAG 2 cut(s) 251, 419
SstI GAGCTC 1 cut(s) 1377
StyD4I CCNGG 5 cut(s) 118, 508, 906, 1342, 1440
StyI CCWWGG 2 cut(s) 125, 276
TaaI ACNGT 4 cut(s) 353, 883, 949, 1471
TaqI TCGA 2 cut(s) 566, 717
TasI AATT 6 cut(s) 363, 408, 459, 1212, 1300, 1524
TatI WGTACW 2 cut(s) 835, 1230
TfiI GAWTC 2 cut(s) 339, 979
Tru1I TTAA 7 cut(s) 314, 428, 489, 842, 959, 1026, 1200
Tru9I TTAA 7 cut(s) 314, 428, 489, 842, 959, 1026, 1200
TscAI CASTG 1 cut(s) 535
TseI GCWGC 5 cut(s) 7, 572, 685, 724, 1115
TspDTI ATGAA 9 cut(s) 249, 302, 615, 1007, 1062, 1082, 1437, 1442, 1449
TspGWI ACGGA 1 cut(s) 1253
TspRI CASTG 1 cut(s) 535
VpaK11BI GGWCC 2 cut(s) 122, 212
VspI ATTAAT 1 cut(s) 1200
XapI RAATTY 1 cut(s) 408
XceI RCATGY 2 cut(s) 692, 1043
XcmI CCANNNNNNNNNTGG 1 cut(s) 914
XhoI CTCGAG 1 cut(s) 716
XspI CTAG 2 cut(s) 251, 419
ZrmI AGTACT 1 cut(s) 1232
Zsp2I ATGCAT 1 cut(s) 1207
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.