Rorug01G0126400

iron ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000132
Physical Location & Seq
Reverse (-)
21575093 .. 21577277
2185 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0126400.1

Sequence Viewer

Length: 1785 bp
ATGGAAGCTATTACCTCAGAAATTCTCATTTCTTTCTTTTTTCTATCTGTCATGGCATTCTTACAAGGGATTGAAGCATCTCAAAATGCTTGCACAGAATCCATGTGTTCTGATAATGCCCCGGCTATCCACGTCCCATTCCGCCTCAGATATCATGACCAGTCTACAGTTCTTGATGAGCAGCAGAGTGTACTAGCAAAATTCTATGTCAAACACATCGATTATATCCATCAAAGCATCGAAGTACACTATAGAAACCCCTATGTCGACTGCCTGTTGCTAAAGCCTTTCGAAATGCCAATTTTCCCCTTCTCCTTGTACGTCTCAGAAATGGACTTTTACAACTTTACCTTGTTACGTTGTCCTACTGAATTTGAAATAGATACATGGGGCGAAGTCCGGTGCCTTAGTCACTCAGCTGCCTACAGGATTAAGATCTTTTATTCTGACTATCACTTACTCGATAACGCACCGTTCATACAGTCTTGTACAAAGATGTATGATGTTTTATCATTTCCGCACAGCATAAGGTACTTACATTTGAATTGGTCAACACCAAATTGTACAGAATGTGAAGCAAGGGGGAAGAGGTGTAGATTCAACAGCAATGGCACCGAAAGTGGAATTGTATGTACTGAAAGCACAACAAGAACAAACTTCGAGGCTACAGGTACAATGCTGGTGTTCGTGATTCTGTTACTAATGCCTTTTTCGGTCTTCTGTGTCTACGGCTGGGATATCAAGGAAAAGGAAAATCAGTTAAGAATTGAAAGGTTTTTAGAGGATTACAAAGCTCTCAAGCCAAGTAGATATTCTTATGCGGATATTAAGAGAATTACAAATCATTTCAAGCACAAGATCGGTGAAGGAGCCTATGGAACTGTTTTCAAAGGAAAACTTTCTTCGGAAGTCTTTGTTGCTGTAAAAGTCCTTAACAATTCAAAGGGGGATGGAGAAGAGTTCATAAATGAAGTGGGAACAATGGGTCGTATCCACCATGTCAATGTGGTTCGCTTGGTTGGCTTCTGCGCTGATGGATTTAGACGCGCTCTGGTGTACGAGTTCTCGCCCAATGGCGCACTACATGAATTCATTTCCTCAGCAGATAATAAGAATGGTTTTCTTGGTTGGAATAAGTATCTAGATATTTCTATAGGAATAGCAAAAGGAATTGAATATCTACACCAAGGATGCGATCAACGAATTCTCCATTTCGACATCAAACCCCACAATGTTTTGCTTGACCATAACTTGACTCCGAAAATTTCTGATTTTGGTTTGTCAAAGTTATGTGCCAAGGATCAAAGCATAGTGTCAATGACTACTGCTAGGGGGACAATGGGATACATTGCACCAGAAGTGTTCTCCAGGAATTTCGGGAATGTATCTTATAAGTCAGATGTCTATAGTTTTGGAATGTTGTTGCTTGAGATTGTAGGGGGGAGGAACAATAAGGGTGCAGATCAGGACTCCGGTAATGACGTTTACTACCCAGAATGGATTTACAATCTTCTAGAAGAAGGAGAAGATGTACGAGTCCGAATTGAGGAGAAAGGAGATGCTATAATTGCAAAGAAACTTGCAGTTGTAGGGCTTTGGTGCATCCAATGGCACCCGGTGGACCGTCCATCCATGAAAGTAGTTGTCCAAATGTTGGAAGGAAGAGAAAATTTAGAAATGCCTCCCAATCCTTTTGGCTCTACAGATCATACAAGAACGTATGCAAACCCCCCAACTGCTAGACGCTTCAACCCTGAGTTAGAAGCAATTGTTGAATTAGAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

594

Amino Acids

67.89

Weight (kDa)

5.89

Isoelectric Point (pI)

44.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 282 - 552 3.2e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 283 - 550 2.1e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1392
AccB1I GGYRCC 3 cut(s) 402, 611, 1611
AccB7I CCANNNNNTGG 1 cut(s) 1654
AccI GTMKAC 3 cut(s) 164, 267, 726
AccII CGCG 1 cut(s) 1047
AciI CCGC 3 cut(s) 142, 518, 821
AclWI GGATC 1 cut(s) 1308
AcsI RAATTY 8 cut(s) 21, 200, 371, 1088, 1203, 1263, 1372, 1669
AdeI CACNNNGTG 1 cut(s) 1618
AfiI CCNNNNNNNGG 2 cut(s) 1546, 1654
AjiI CACGTC 1 cut(s) 133
AjnI CCWGG 1 cut(s) 1367
AjuI GAANNNNNNNTTGG 2 cut(s) 796, 828
AluBI AGCT 3 cut(s) 8, 419, 794
AluI AGCT 3 cut(s) 8, 419, 794
Alw26I GTCTC 1 cut(s) 328
AlwI GGATC 1 cut(s) 1308
ApeKI GCWGC 2 cut(s) 181, 419
ApoI RAATTY 8 cut(s) 21, 200, 371, 1088, 1203, 1263, 1372, 1669
Asp700I GAANNNNTTC 1 cut(s) 898
AspLEI GCGC 3 cut(s) 1031, 1049, 1079
AspS9I GGNCC 1 cut(s) 1621
AsuC2I CCSGG 2 cut(s) 122, 1616
AsuHPI GGTGA 1 cut(s) 875
AsuII TTCGAA 1 cut(s) 291
AvaII GGWCC 1 cut(s) 1621
BanI GGYRCC 3 cut(s) 402, 611, 1611
BbsI GAAGAC 1 cut(s) 709
BbvCI CCTCAGC 1 cut(s) 1099
BbvI GCAGC 2 cut(s) 193, 406
BccI CCATC 4 cut(s) 237, 944, 1028, 1636
BceAI ACGGC 1 cut(s) 745
BciT130I CCWGG 1 cut(s) 1369
BciVI GTATCC 2 cut(s) 1001, 1337
BcnI CCSGG 2 cut(s) 122, 1616
BcoDI GTCTC 1 cut(s) 328
BfaI CTAG 5 cut(s) 194, 1142, 1329, 1514, 1740
BfmI CTRYAG 7 cut(s) 165, 250, 424, 666, 1152, 1405, 1701
BfuI GTATCC 2 cut(s) 1001, 1337
BglII AGATCT 1 cut(s) 435
BisI GCNGC 2 cut(s) 182, 420
BlsI GCNGC 2 cut(s) 183, 421
Bme1390I CCNGG 3 cut(s) 122, 1369, 1616
Bme18I GGWCC 1 cut(s) 1621
BmgBI CACGTC 1 cut(s) 133
BmgT120I GGNCC 1 cut(s) 1621
BmiI GGNNCC 4 cut(s) 404, 613, 871, 1613
BmrFI CCNGG 3 cut(s) 122, 1369, 1616
BmsI GCATC 5 cut(s) 86, 246, 1181, 1549, 1611
BpiI GAAGAC 1 cut(s) 709
BpmI CTGGAG 1 cut(s) 1351
Bpu10I CCTNAGC 1 cut(s) 1099
Bpu14I TTCGAA 1 cut(s) 291
BpuEI CTTGAG 2 cut(s) 782, 1448
BpuMI CCSGG 2 cut(s) 122, 1616
Bsa29I ATCGAT 1 cut(s) 219
BsaBI GATNNNNATC 1 cut(s) 434
BsaJI CCNNGG 3 cut(s) 120, 1186, 1296
BsaWI WCCGGW 2 cut(s) 399, 1472
BsaXI ACNNNNNCTCC 4 cut(s) 1191, 1221, 1515, 1545
Bsc4I CCNNNNNNNGG 2 cut(s) 1546, 1654
Bse1I ACTGG 1 cut(s) 160
Bse3DI GCAATG 2 cut(s) 613, 1347
Bse8I GATNNNNATC 1 cut(s) 434
BseBI CCWGG 1 cut(s) 1369
BseCI ATCGAT 1 cut(s) 219
BseDI CCNNGG 3 cut(s) 120, 1186, 1296
BseGI GGATG 4 cut(s) 955, 1196, 1602, 1628
BseJI GATNNNNATC 1 cut(s) 434
BseLI CCNNNNNNNGG 2 cut(s) 1546, 1654
BseMI GCAATG 2 cut(s) 613, 1347
BseMII CTCAG 6 cut(s) 30, 160, 339, 429, 1113, 1746
BseNI ACTGG 1 cut(s) 160
BseRI GAGGAG 1 cut(s) 1562
BseXI GCAGC 2 cut(s) 193, 406
BseYI CCCAGC 1 cut(s) 732
BsgI GTGCAG 1 cut(s) 1479
Bsh1236I CGCG 1 cut(s) 1047
BshNI GGYRCC 3 cut(s) 402, 611, 1611
BshVI ATCGAT 1 cut(s) 219
BsiSI CCGG 4 cut(s) 122, 400, 1473, 1616
BslFI GGGAC 2 cut(s) 119, 1348
BslI CCNNNNNNNGG 2 cut(s) 1546, 1654
BsmAI GTCTC 1 cut(s) 328
BsmBI CGTCTC 1 cut(s) 328
BsmFI GGGAC 2 cut(s) 119, 1348
BsmI GAATGC 1 cut(s) 56
Bsp119I TTCGAA 1 cut(s) 291
Bsp1407I TGTACA 2 cut(s) 488, 563
Bsp143I GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
BspACI CCGC 3 cut(s) 142, 518, 821
BspCNI CTCAG 6 cut(s) 29, 159, 338, 428, 1112, 1747
BspDI ATCGAT 1 cut(s) 219
BspFNI CGCG 1 cut(s) 1047
BspHI TCATGA 1 cut(s) 154
BspLI GGNNCC 4 cut(s) 404, 613, 871, 1613
BspPI GGATC 1 cut(s) 1308
BspT104I TTCGAA 1 cut(s) 291
BspT107I GGYRCC 3 cut(s) 402, 611, 1611
BsrDI GCAATG 2 cut(s) 613, 1347
BsrGI TGTACA 2 cut(s) 488, 563
BsrI ACTGG 1 cut(s) 160
BssECI CCNNGG 3 cut(s) 120, 1186, 1296
BssMI GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
BssT1I CCWWGG 2 cut(s) 1186, 1296
Bst2UI CCWGG 1 cut(s) 1369
Bst4CI ACNGT 5 cut(s) 169, 474, 483, 883, 1625
Bst6I CTCTTC 3 cut(s) 581, 951, 1657
BstAUI TGTACA 2 cut(s) 488, 563
BstBI TTCGAA 1 cut(s) 291
BstC8I GCNNGC 1 cut(s) 91
BstDEI CTNAG 7 cut(s) 16, 146, 325, 407, 415, 1099, 1755
BstF5I GGATG 4 cut(s) 955, 1196, 1602, 1628
BstFNI CGCG 1 cut(s) 1047
BstHHI GCGC 3 cut(s) 1031, 1049, 1079
BstKTI GATC 6 cut(s) 438, 861, 1198, 1303, 1465, 1708
BstMAI GTCTC 1 cut(s) 328
BstMBI GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
BstMWI GCNNNNNNNGC 2 cut(s) 1020, 1568
BstNI CCWGG 1 cut(s) 1369
BstSCI CCNGG 3 cut(s) 120, 1367, 1614
BstSFI CTRYAG 7 cut(s) 165, 250, 424, 666, 1152, 1405, 1701
BstUI CGCG 1 cut(s) 1047
BstV1I GCAGC 2 cut(s) 193, 406
BstV2I GAAGAC 1 cut(s) 709
BstX2I RGATCY 1 cut(s) 435
BstYI RGATCY 1 cut(s) 435
Bsu15I ATCGAT 1 cut(s) 219
BsuI GTATCC 2 cut(s) 1001, 1337
BsuTUI ATCGAT 1 cut(s) 219
BtrI CACGTC 1 cut(s) 133
BtsCI GGATG 4 cut(s) 955, 1196, 1602, 1628
Cac8I GCNNGC 1 cut(s) 91
CciI TCATGA 1 cut(s) 154
CfoI GCGC 3 cut(s) 1031, 1049, 1079
Cfr13I GGNCC 1 cut(s) 1621
ClaI ATCGAT 1 cut(s) 219
CseI GACGC 2 cut(s) 1053, 1752
CviAII CATG 7 cut(s) 52, 103, 155, 387, 998, 1085, 1633
DdeI CTNAG 7 cut(s) 16, 146, 325, 407, 415, 1099, 1755
DpnI GATC 6 cut(s) 437, 860, 1197, 1302, 1464, 1707
DpnII GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
DraIII CACNNNGTG 1 cut(s) 1618
Eam1104I CTCTTC 3 cut(s) 581, 951, 1657
EarI CTCTTC 3 cut(s) 581, 951, 1657
EciI GGCGGA 1 cut(s) 131
Eco130I CCWWGG 2 cut(s) 1186, 1296
Eco32I GATATC 2 cut(s) 152, 739
Eco47I GGWCC 1 cut(s) 1621
EcoRI GAATTC 2 cut(s) 1088, 1203
EcoRII CCWGG 1 cut(s) 1367
EcoRV GATATC 2 cut(s) 152, 739
EcoT14I CCWWGG 2 cut(s) 1186, 1296
ErhI CCWWGG 2 cut(s) 1186, 1296
Esp3I CGTCTC 1 cut(s) 328
FaeI CATG 7 cut(s) 55, 106, 158, 390, 1001, 1088, 1636
FalI AAGNNNNNCTT 2 cut(s) 882, 914
FaqI GGGAC 2 cut(s) 119, 1348
FatI CATG 7 cut(s) 51, 102, 154, 386, 997, 1084, 1632
FblI GTMKAC 3 cut(s) 164, 267, 726
Fnu4HI GCNGC 2 cut(s) 182, 420
FokI GGATG 4 cut(s) 962, 1203, 1589, 1615
Fsp4HI GCNGC 2 cut(s) 182, 420
FspBI CTAG 5 cut(s) 194, 1142, 1329, 1514, 1740
GlaI GCGC 3 cut(s) 1030, 1048, 1078
GluI GCNGC 2 cut(s) 182, 420
GsaI CCCAGC 1 cut(s) 736
GsuI CTGGAG 1 cut(s) 1351
HapII CCGG 4 cut(s) 122, 400, 1473, 1616
HgaI GACGC 2 cut(s) 1053, 1752
HhaI GCGC 3 cut(s) 1031, 1049, 1079
Hin1II CATG 7 cut(s) 55, 106, 158, 390, 1001, 1088, 1636
Hin6I GCGC 3 cut(s) 1029, 1047, 1077
HinP1I GCGC 3 cut(s) 1029, 1047, 1077
HincII GTYRAC 2 cut(s) 268, 552
HindII GTYRAC 2 cut(s) 268, 552
HinfI GANTC 6 cut(s) 98, 597, 691, 1255, 1469, 1536
HpaII CCGG 4 cut(s) 122, 400, 1473, 1616
HphI GGTGA 1 cut(s) 875
Hpy166II GTNNAC 9 cut(s) 165, 191, 247, 268, 552, 727, 1057, 1486, 1621
Hpy188III TCNNGA 7 cut(s) 155, 173, 688, 1142, 1378, 1466, 1514
Hpy8I GTNNAC 9 cut(s) 165, 191, 247, 268, 552, 727, 1057, 1486, 1621
HpyAV CCTTC 4 cut(s) 319, 860, 1514, 1652
HpyCH4III ACNGT 5 cut(s) 169, 474, 483, 883, 1625
HpyCH4IV ACGT 5 cut(s) 132, 321, 358, 1482, 1718
HpyCH4V TGCA 7 cut(s) 93, 1352, 1460, 1571, 1583, 1602, 1724
HpyF10VI GCNNNNNNNGC 2 cut(s) 1020, 1568
HpyF3I CTNAG 7 cut(s) 16, 146, 325, 407, 415, 1099, 1755
HpySE526I ACGT 5 cut(s) 132, 321, 358, 1482, 1718
Hsp92II CATG 7 cut(s) 55, 106, 158, 390, 1001, 1088, 1636
HspAI GCGC 3 cut(s) 1029, 1047, 1077
Kzo9I GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
LmnI GCTCC 1 cut(s) 869
Lsp1109I GCAGC 2 cut(s) 193, 406
LweI GCATC 5 cut(s) 86, 246, 1181, 1549, 1611
MaeI CTAG 5 cut(s) 194, 1142, 1329, 1514, 1740
MaeII ACGT 5 cut(s) 132, 321, 358, 1482, 1718
MaeIII GTNAC 3 cut(s) 354, 410, 696
MalI GATC 6 cut(s) 437, 860, 1197, 1302, 1464, 1707
MboI GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
MboII GAAGA 8 cut(s) 598, 709, 894, 968, 1502, 1529, 1538, 1674
MfeI CAATTG 1 cut(s) 1767
MflI RGATCY 1 cut(s) 435
MlyI GAGTC 3 cut(s) 1249, 1463, 1545
MmeI TCCRAC 2 cut(s) 1109, 1635
MnlI CCTC 9 cut(s) 25, 155, 582, 655, 775, 1108, 1437, 1540, 1692
MroXI GAANNNNTTC 1 cut(s) 898
MseI TTAA 4 cut(s) 432, 761, 828, 933
MslI CAYNNNNRTG 1 cut(s) 1002
MspA1I CMGCKG 1 cut(s) 419
MspI CCGG 4 cut(s) 122, 400, 1473, 1616
MspR9I CCNGG 3 cut(s) 122, 1369, 1616
MunI CAATTG 1 cut(s) 1767
Mva1269I GAATGC 1 cut(s) 56
MvaI CCWGG 1 cut(s) 1369
MvnI CGCG 1 cut(s) 1047
MwoI GCNNNNNNNGC 2 cut(s) 1020, 1568
NciI CCSGG 2 cut(s) 122, 1616
NdeII GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
NlaIII CATG 7 cut(s) 55, 106, 158, 390, 1001, 1088, 1636
NlaIV GGNNCC 4 cut(s) 404, 613, 871, 1613
NmuCI GTSAC 1 cut(s) 410
NspV TTCGAA 1 cut(s) 291
PagI TCATGA 1 cut(s) 154
PctI GAATGC 1 cut(s) 56
PdmI GAANNNNTTC 1 cut(s) 898
PfeI GAWTC 3 cut(s) 98, 597, 691
PflMI CCANNNNNTGG 1 cut(s) 1654
PfoI TCCNGGA 1 cut(s) 1367
PkrI GCNGC 2 cut(s) 183, 421
PleI GAGTC 3 cut(s) 1249, 1463, 1544
PpsI GAGTC 3 cut(s) 1249, 1463, 1544
PsiI TTATAA 1 cut(s) 1392
Psp6I CCWGG 1 cut(s) 1367
PspFI CCCAGC 1 cut(s) 732
PspGI CCWGG 1 cut(s) 1367
PspN4I GGNNCC 4 cut(s) 404, 613, 871, 1613
PspPI GGNCC 1 cut(s) 1621
PsuI RGATCY 1 cut(s) 435
PvuII CAGCTG 1 cut(s) 419
RseI CAYNNNNRTG 1 cut(s) 1002
SalI GTCGAC 1 cut(s) 266
SaqAI TTAA 4 cut(s) 432, 761, 828, 933
SatI GCNGC 2 cut(s) 182, 420
Sau3AI GATC 6 cut(s) 435, 858, 1195, 1300, 1462, 1705
Sau96I GGNCC 1 cut(s) 1621
SchI GAGTC 3 cut(s) 1249, 1463, 1545
ScrFI CCNGG 3 cut(s) 122, 1369, 1616
SfaNI GCATC 5 cut(s) 86, 246, 1181, 1549, 1611
SfcI CTRYAG 7 cut(s) 165, 250, 424, 666, 1152, 1405, 1701
SfuI TTCGAA 1 cut(s) 291
SinI GGWCC 1 cut(s) 1621
SmiMI CAYNNNNRTG 1 cut(s) 1002
SmlI CTYRAG 2 cut(s) 797, 1427
SmoI CTYRAG 2 cut(s) 797, 1427
SsiI CCGC 3 cut(s) 142, 518, 821
SspMI CTAG 5 cut(s) 194, 1142, 1329, 1514, 1740
StyD4I CCNGG 3 cut(s) 120, 1367, 1614
StyI CCWWGG 2 cut(s) 1186, 1296
TaaI ACNGT 5 cut(s) 169, 474, 483, 883, 1625
TaiI ACGT 5 cut(s) 135, 324, 361, 1485, 1721
TaqI TCGA 7 cut(s) 219, 240, 267, 291, 462, 660, 1215
TaqII GACCGA 1 cut(s) 703
TatI WGTACW 5 cut(s) 190, 244, 488, 563, 632
TfiI GAWTC 3 cut(s) 98, 597, 691
Tru1I TTAA 4 cut(s) 432, 761, 828, 933
Tru9I TTAA 4 cut(s) 432, 761, 828, 933
TseFI GTSAC 1 cut(s) 410
TseI GCWGC 2 cut(s) 181, 419
Tsp45I GTSAC 1 cut(s) 410
TspDTI ATGAA 6 cut(s) 466, 952, 984, 1081, 1101, 1649
Van91I CCANNNNNTGG 1 cut(s) 1654
VpaK11BI GGWCC 1 cut(s) 1621
XapI RAATTY 8 cut(s) 21, 200, 371, 1088, 1203, 1263, 1372, 1669
XbaI TCTAGA 2 cut(s) 1141, 1513
XmiI GTMKAC 3 cut(s) 164, 267, 726
XmnI GAANNNNTTC 1 cut(s) 898
XspI CTAG 5 cut(s) 194, 1142, 1329, 1514, 1740
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.