RchiOBHm_Chr3g0447801

iron ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000132
Physical Location & Seq
Reverse (-)
345342 .. 346983
1642 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41526

Sequence Viewer

Length: 1560 bp
ATGTTCCGAGATATCCAAATTCCTTCCCTTAATTGTCATGAAGATCTTCCTCTCTTTACCTCTCTGGTTGTCCTAGTGATCCTACTTCTTCTGAATCGGTATTGGAAGAAGATGAGCCATACTAGTCTAAATGATGATGGTATTCTTCAGTTGCCCCCAGGGCCATGGAAGCTACCTCTTATTGAAAACTTGCATAAGTTAGCTTTAGCTGTTGGTTCTTTACCACATCATTTCTTAACAGACTTGGCCAAGAAATACGGCCCTATGATGCACCTCAAACTTGGACAAGTATCAGCCATTGTCATATCATCACCTAACTTAGCCAAGCAAGCGGTGAAGATTTTCTCATACCGACCTGGTCTTCTTGCTTTGGAAATCATGTCTTATAATTATTCAGGCATCATTGCTAGTCCTTGTAATGGTTACTGGAGAGAAATGCGCAAGATTTGTGGGTTGGAGCTCTTAAGTGCAAAGCGCGTGCAGTCATTTTCATCATTGAGAGAAGAAGAGACATGGAATCTTGTGCAGTCAATTACTCAATTATCACAGCCAATCAACCTTAGCGAGATGATTTTCTCCACCTTAAACAACATTACAGCTCACGTAGCCTTAGGGAAAAAATGCAAACACCAACAAGAGTTTACATCATTGGTCCACGAAACGATTAGGCTTTCTACAGGCTTTGGTGTGCCAGATCTGTTCCATTCGATCCAATTCCTCCATCATGCCACTGGGACCAAGTCTGTCCTTGAAAAACTACATGGAAAGATGGACATGATTCTTGTTGATATCATCAATGATCATAAACAAGTGCTACAGAGCCAGAGAACAGCCGGTGAAGATCACCTGCAGGAAGATCAAGATCTGGTCAACGTGCTTCTACAACTTCAAGAGTCTGGTGAGCTCCAATTCCAACTCACAACTAACCATGTCAAAGCTGTCACCCTGGATATGTATTTTGCTGGAAGTGAGACTTCAGCGGCTACCATAGAGTGGGCAATGTTAGAACTTCTGAGAAACCCAAGAGCAATGGACAAAGCACAAGCTGAGATACGCCAACTTGTTGCAGGAAAGAGGAAAATCCAAGAGGCAGACATTAAGAAACTAAATTACTTGAAGTTGATCATAAAAGAAACTCTCCGACTGCACCCTCCTGGTCCCTTAATCCCAAGACAAGCAAATGAAAGATGCAAAGTCAATAGATATGATGTACCATCTGAAGCCAAGCTGTTAATCAATGTTTGGGCAATAGGAAGAGACCTGAAGCATTGGGGCCCCAATGCTGATTGCTTTGAGCCTGAGAGGTTTCAAGGTTATTCCATCGATTTTCGAGGGACCAACTATGAATTTATTCCATTTGGGGCTGGTAAGAGAATATGTCCAGGCCTATCATTTGCAACTATAATTGTTGAGCTTGCACTTTGTCAGTTGCTTTACTTCTTCAACTGGAAACTCCCAAATGGGACTAAACCACAAGAGCTTGACATGACTGAATCTGTGGGAATGGCCACCAGGAAGAGGAATGATTTGAATGTTATTGCTATTCCTTTCATTTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

519

Amino Acids

58.86

Weight (kDa)

8.61

Isoelectric Point (pI)

36.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 52 - 505 7.3e-87 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 387
AarI CACCTGC 1 cut(s) 855
Acc16I TGCGCA 1 cut(s) 440
Acc36I ACCTGC 1 cut(s) 855
AccB7I CCANNNNNTGG 1 cut(s) 993
AccII CGCG 1 cut(s) 477
AciI CCGC 2 cut(s) 332, 980
AclWI GGATC 2 cut(s) 73, 703
AcoI YGGCCR 2 cut(s) 246, 1506
AcsI RAATTY 2 cut(s) 18, 1346
AcuI CTGAAG 4 cut(s) 131, 960, 1239, 1283
AfaI GTAC 1 cut(s) 1212
AfiI CCNNNNNNNGG 3 cut(s) 419, 993, 1518
AflII CTTAAG 1 cut(s) 463
AgsI TTSAA 7 cut(s) 185, 752, 890, 1117, 1310, 1444, 1531
AhlI ACTAGT 1 cut(s) 122
AjnI CCWGG 6 cut(s) 157, 355, 945, 1153, 1381, 1511
Alw21I GWGCWC 2 cut(s) 462, 906
Alw26I GTCTC 3 cut(s) 503, 965, 1251
AlwI GGATC 2 cut(s) 73, 703
AoxI GGCC 6 cut(s) 161, 246, 259, 1273, 1384, 1506
ApaI GGGCCC 1 cut(s) 1277
ApoI RAATTY 2 cut(s) 18, 1346
Asp700I GAANNNNTTC 3 cut(s) 45, 341, 1350
AspLEI GCGC 2 cut(s) 441, 477
AspS9I GGNCC 8 cut(s) 161, 260, 652, 735, 1157, 1273, 1274, 1335
AsuHPI GGTGA 6 cut(s) 303, 346, 836, 848, 911, 934
AvaII GGWCC 4 cut(s) 652, 735, 1157, 1335
AxyI CCTNAGG 1 cut(s) 610
BaeGI GKGCMC 1 cut(s) 1277
BalI TGGCCA 2 cut(s) 248, 1508
BanII GRGCYC 3 cut(s) 462, 906, 1277
BbsI GAAGAC 1 cut(s) 353
Bbv12I GWGCWC 2 cut(s) 462, 906
BccI CCATC 5 cut(s) 131, 729, 763, 1222, 1328
BceAI ACGGC 1 cut(s) 274
BciT130I CCWGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
BclI TGATCA 2 cut(s) 799, 1122
BcoDI GTCTC 3 cut(s) 503, 965, 1251
BcuI ACTAGT 1 cut(s) 122
BfaI CTAG 3 cut(s) 74, 123, 408
BfmI CTRYAG 3 cut(s) 675, 815, 848
BfrI CTTAAG 1 cut(s) 463
BfuAI ACCTGC 1 cut(s) 855
BglI GCCNNNNNGGC 1 cut(s) 160
BglII AGATCT 3 cut(s) 43, 694, 862
BisI GCNGC 1 cut(s) 981
BlsI GCNGC 1 cut(s) 982
Bme1390I CCNGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
Bme18I GGWCC 4 cut(s) 652, 735, 1157, 1335
BmgT120I GGNCC 8 cut(s) 161, 260, 652, 735, 1157, 1273, 1274, 1335
BmiI GGNNCC 6 cut(s) 736, 1159, 1274, 1275, 1276, 1336
BmrFI CCNGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
BmrI ACTGGG 1 cut(s) 741
BmsI GCATC 3 cut(s) 258, 408, 1178
BmuI ACTGGG 1 cut(s) 741
BpiI GAAGAC 1 cut(s) 353
BpmI CTGGAG 1 cut(s) 448
Bpu10I CCTNAGC 1 cut(s) 560
Bsa29I ATCGAT 1 cut(s) 1323
BsaAI YACGTR 1 cut(s) 604
BsaBI GATNNNNATC 1 cut(s) 861
BsaI GGTCTC 1 cut(s) 1251
BsaJI CCNNGG 4 cut(s) 157, 158, 164, 945
Bsc4I CCNNNNNNNGG 3 cut(s) 419, 993, 1518
Bse118I RCCGGY 1 cut(s) 833
Bse1I ACTGG 3 cut(s) 431, 736, 1451
Bse21I CCTNAGG 1 cut(s) 610
Bse3DI GCAATG 3 cut(s) 402, 1005, 1035
Bse8I GATNNNNATC 1 cut(s) 861
BseBI CCWGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
BseCI ATCGAT 1 cut(s) 1323
BseDI CCNNGG 4 cut(s) 157, 158, 164, 945
BseJI GATNNNNATC 1 cut(s) 861
BseLI CCNNNNNNNGG 3 cut(s) 419, 993, 1518
BseMI GCAATG 3 cut(s) 402, 1005, 1035
BseMII CTCAG 3 cut(s) 1004, 1038, 1290
BseNI ACTGG 3 cut(s) 431, 736, 1451
BseSI GKGCMC 1 cut(s) 1277
BsgI GTGCAG 3 cut(s) 500, 545, 1130
Bsh1236I CGCG 1 cut(s) 477
BshFI GGCC 6 cut(s) 163, 248, 261, 1275, 1386, 1508
BshVI ATCGAT 1 cut(s) 1323
BsiHKAI GWGCWC 2 cut(s) 462, 906
BsiSI CCGG 1 cut(s) 834
BslFI GGGAC 4 cut(s) 748, 1143, 1348, 1477
BslI CCNNNNNNNGG 3 cut(s) 419, 993, 1518
BsmAI GTCTC 3 cut(s) 503, 965, 1251
BsmFI GGGAC 4 cut(s) 748, 1143, 1348, 1477
BsnI GGCC 6 cut(s) 163, 248, 261, 1275, 1386, 1508
Bso31I GGTCTC 1 cut(s) 1251
Bsp120I GGGCCC 1 cut(s) 1273
Bsp1286I GDGCHC 3 cut(s) 462, 906, 1277
Bsp143I GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
Bsp19I CCATGG 1 cut(s) 164
BspACI CCGC 2 cut(s) 332, 980
BspANI GGCC 6 cut(s) 163, 248, 261, 1275, 1386, 1508
BspCNI CTCAG 3 cut(s) 1005, 1039, 1291
BspDI ATCGAT 1 cut(s) 1323
BspFNI CGCG 1 cut(s) 477
BspHI TCATGA 1 cut(s) 37
BspLI GGNNCC 6 cut(s) 736, 1159, 1274, 1275, 1276, 1336
BspMAI CTGCAG 1 cut(s) 852
BspMI ACCTGC 1 cut(s) 855
BspPI GGATC 2 cut(s) 73, 703
BspTI CTTAAG 1 cut(s) 463
BspTNI GGTCTC 1 cut(s) 1251
BsrDI GCAATG 3 cut(s) 402, 1005, 1035
BsrFI RCCGGY 1 cut(s) 833
BsrI ACTGG 3 cut(s) 431, 736, 1451
BssAI RCCGGY 1 cut(s) 833
BssECI CCNNGG 4 cut(s) 157, 158, 164, 945
BssMI GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
BssT1I CCWWGG 1 cut(s) 164
Bst2UI CCWGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
Bst6I CTCTTC 3 cut(s) 501, 1249, 1511
BstAFI CTTAAG 1 cut(s) 463
BstBAI YACGTR 1 cut(s) 604
BstC8I GCNNGC 3 cut(s) 330, 479, 1416
BstDEI CTNAG 6 cut(s) 319, 560, 610, 1013, 1047, 1299
BstDSI CCRYGG 1 cut(s) 164
BstFNI CGCG 1 cut(s) 477
BstHHI GCGC 2 cut(s) 441, 477
BstKTI GATC 9 cut(s) 46, 81, 697, 711, 802, 844, 859, 865, 1125
BstMAI GTCTC 3 cut(s) 503, 965, 1251
BstMBI GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
BstMWI GCNNNNNNNGC 4 cut(s) 160, 169, 329, 605
BstNI CCWGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
BstSCI CCNGG 6 cut(s) 157, 355, 945, 1153, 1381, 1511
BstSFI CTRYAG 3 cut(s) 675, 815, 848
BstSLI GKGCMC 1 cut(s) 1277
BstUI CGCG 1 cut(s) 477
BstV2I GAAGAC 1 cut(s) 353
BstX2I RGATCY 3 cut(s) 43, 694, 862
BstXI CCANNNNNNTGG 1 cut(s) 165
BstYI RGATCY 3 cut(s) 43, 694, 862
Bsu15I ATCGAT 1 cut(s) 1323
Bsu36I CCTNAGG 1 cut(s) 610
BsuRI GGCC 6 cut(s) 163, 248, 261, 1275, 1386, 1508
BsuTUI ATCGAT 1 cut(s) 1323
BtgI CCRYGG 1 cut(s) 164
BtsIMutI CAGTG 1 cut(s) 729
BveI ACCTGC 1 cut(s) 855
Cac8I GCNNGC 3 cut(s) 330, 479, 1416
CciI TCATGA 1 cut(s) 37
CfoI GCGC 2 cut(s) 441, 477
Cfr10I RCCGGY 1 cut(s) 833
Cfr13I GGNCC 8 cut(s) 161, 260, 652, 735, 1157, 1273, 1274, 1335
ClaI ATCGAT 1 cut(s) 1323
CsiI ACCWGGT 1 cut(s) 355
Csp6I GTAC 1 cut(s) 1211
CspCI CAANNNNNGTGG 2 cut(s) 430, 465
CviAII CATG 9 cut(s) 38, 165, 379, 513, 725, 761, 775, 929, 1486
CviQI GTAC 1 cut(s) 1211
DdeI CTNAG 6 cut(s) 319, 560, 610, 1013, 1047, 1299
DpnI GATC 9 cut(s) 45, 80, 696, 710, 801, 843, 858, 864, 1124
DpnII GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
EaeI YGGCCR 2 cut(s) 246, 1506
Eam1104I CTCTTC 3 cut(s) 501, 1249, 1511
EarI CTCTTC 3 cut(s) 501, 1249, 1511
Ecl136II GAGCTC 2 cut(s) 460, 904
Eco130I CCWWGG 1 cut(s) 164
Eco147I AGGCCT 1 cut(s) 1386
Eco24I GRGCYC 3 cut(s) 462, 906, 1277
Eco31I GGTCTC 1 cut(s) 1251
Eco32I GATATC 2 cut(s) 13, 790
Eco47I GGWCC 4 cut(s) 652, 735, 1157, 1335
Eco53kI GAGCTC 2 cut(s) 460, 904
Eco57I CTGAAG 4 cut(s) 131, 960, 1239, 1283
Eco81I CCTNAGG 1 cut(s) 610
EcoICRI GAGCTC 2 cut(s) 460, 904
EcoO109I RGGNCCY 2 cut(s) 1273, 1274
EcoRII CCWGG 6 cut(s) 157, 355, 945, 1153, 1381, 1511
EcoRV GATATC 2 cut(s) 13, 790
EcoT14I CCWWGG 1 cut(s) 164
EcoT38I GRGCYC 3 cut(s) 462, 906, 1277
ErhI CCWWGG 1 cut(s) 164
FaeI CATG 9 cut(s) 41, 168, 382, 516, 728, 764, 778, 932, 1489
FalI AAGNNNNNCTT 2 cut(s) 958, 990
FaqI GGGAC 4 cut(s) 748, 1143, 1348, 1477
FatI CATG 9 cut(s) 37, 164, 378, 512, 724, 760, 774, 928, 1485
FbaI TGATCA 2 cut(s) 799, 1122
Fnu4HI GCNGC 1 cut(s) 981
FriOI GRGCYC 3 cut(s) 462, 906, 1277
Fsp4HI GCNGC 1 cut(s) 981
FspBI CTAG 3 cut(s) 74, 123, 408
FspI TGCGCA 1 cut(s) 440
GlaI GCGC 2 cut(s) 440, 476
GluI GCNGC 1 cut(s) 981
GsuI CTGGAG 1 cut(s) 448
HaeIII GGCC 6 cut(s) 163, 248, 261, 1275, 1386, 1508
HapII CCGG 1 cut(s) 834
HhaI GCGC 2 cut(s) 441, 477
Hin1II CATG 9 cut(s) 41, 168, 382, 516, 728, 764, 778, 932, 1489
Hin6I GCGC 2 cut(s) 439, 475
HinP1I GCGC 2 cut(s) 439, 475
HincII GTYRAC 1 cut(s) 871
HindII GTYRAC 1 cut(s) 871
HinfI GANTC 5 cut(s) 94, 517, 778, 893, 1493
HpaII CCGG 1 cut(s) 834
HphI GGTGA 6 cut(s) 303, 346, 836, 848, 911, 934
Hpy166II GTNNAC 3 cut(s) 642, 655, 871
Hpy188I TCNGA 5 cut(s) 8, 93, 1014, 1142, 1219
Hpy188III TCNNGA 3 cut(s) 38, 860, 890
Hpy8I GTNNAC 3 cut(s) 642, 655, 871
HpyAV CCTTC 1 cut(s) 33
HpyCH4IV ACGT 2 cut(s) 603, 873
HpyF10VI GCNNNNNNNGC 4 cut(s) 160, 169, 329, 605
HpyF3I CTNAG 6 cut(s) 319, 560, 610, 1013, 1047, 1299
HpySE526I ACGT 2 cut(s) 603, 873
Hsp92II CATG 9 cut(s) 41, 168, 382, 516, 728, 764, 778, 932, 1489
HspAI GCGC 2 cut(s) 439, 475
Ksp22I TGATCA 2 cut(s) 799, 1122
Kzo9I GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
LmnI GCTCC 2 cut(s) 457, 909
LweI GCATC 3 cut(s) 258, 408, 1178
MabI ACCWGGT 1 cut(s) 355
MaeI CTAG 3 cut(s) 74, 123, 408
MaeII ACGT 2 cut(s) 603, 873
MaeIII GTNAC 2 cut(s) 422, 940
MalI GATC 9 cut(s) 45, 80, 696, 710, 801, 843, 858, 864, 1124
MboI GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
MflI RGATCY 3 cut(s) 43, 694, 862
MhlI GDGCHC 3 cut(s) 462, 906, 1277
MlsI TGGCCA 2 cut(s) 248, 1508
MluNI TGGCCA 2 cut(s) 248, 1508
MlyI GAGTC 1 cut(s) 902
MmeI TCCRAC 3 cut(s) 435, 937, 1165
Mox20I TGGCCA 2 cut(s) 248, 1508
MroXI GAANNNNTTC 3 cut(s) 45, 341, 1350
MscI TGGCCA 2 cut(s) 248, 1508
MseI TTAA 7 cut(s) 30, 236, 464, 584, 1098, 1163, 1232
Msp20I TGGCCA 2 cut(s) 248, 1508
MspA1I CMGCKG 1 cut(s) 980
MspCI CTTAAG 1 cut(s) 463
MspI CCGG 1 cut(s) 834
MspR9I CCNGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
MvaI CCWGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
MvnI CGCG 1 cut(s) 477
MwoI GCNNNNNNNGC 4 cut(s) 160, 169, 329, 605
NcoI CCATGG 1 cut(s) 164
NdeII GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
NlaIII CATG 9 cut(s) 41, 168, 382, 516, 728, 764, 778, 932, 1489
NlaIV GGNNCC 6 cut(s) 736, 1159, 1274, 1275, 1276, 1336
NmuCI GTSAC 1 cut(s) 940
NsbI TGCGCA 1 cut(s) 440
PagI TCATGA 1 cut(s) 37
PaqCI CACCTGC 1 cut(s) 855
PasI CCCWGGG 1 cut(s) 158
PceI AGGCCT 1 cut(s) 1386
PdmI GAANNNNTTC 3 cut(s) 45, 341, 1350
PfeI GAWTC 4 cut(s) 94, 517, 778, 1493
PflFI GACNNNGTC 2 cut(s) 357, 739
PflMI CCANNNNNTGG 1 cut(s) 993
PkrI GCNGC 1 cut(s) 982
PleI GAGTC 1 cut(s) 901
PpsI GAGTC 1 cut(s) 901
Ppu21I YACGTR 1 cut(s) 604
PsiI TTATAA 1 cut(s) 387
Psp124BI GAGCTC 2 cut(s) 462, 906
Psp6I CCWGG 6 cut(s) 157, 355, 945, 1153, 1381, 1511
PspGI CCWGG 6 cut(s) 157, 355, 945, 1153, 1381, 1511
PspN4I GGNNCC 6 cut(s) 736, 1159, 1274, 1275, 1276, 1336
PspOMI GGGCCC 1 cut(s) 1273
PspPI GGNCC 8 cut(s) 161, 260, 652, 735, 1157, 1273, 1274, 1335
PstI CTGCAG 1 cut(s) 852
PsuI RGATCY 3 cut(s) 43, 694, 862
PsyI GACNNNGTC 2 cut(s) 357, 739
RsaI GTAC 1 cut(s) 1212
RsaNI GTAC 1 cut(s) 1211
SacI GAGCTC 2 cut(s) 462, 906
SaqAI TTAA 7 cut(s) 30, 236, 464, 584, 1098, 1163, 1232
SatI GCNGC 1 cut(s) 981
Sau3AI GATC 9 cut(s) 43, 78, 694, 708, 799, 841, 856, 862, 1122
Sau96I GGNCC 8 cut(s) 161, 260, 652, 735, 1157, 1273, 1274, 1335
SbfI CCTGCAGG 1 cut(s) 852
SchI GAGTC 1 cut(s) 902
ScrFI CCNGG 6 cut(s) 159, 357, 947, 1155, 1383, 1513
SdaI CCTGCAGG 1 cut(s) 852
SduI GDGCHC 3 cut(s) 462, 906, 1277
SexAI ACCWGGT 1 cut(s) 355
SfaNI GCATC 3 cut(s) 258, 408, 1178
SfcI CTRYAG 3 cut(s) 675, 815, 848
SinI GGWCC 4 cut(s) 652, 735, 1157, 1335
SmlI CTYRAG 1 cut(s) 463
SmoI CTYRAG 1 cut(s) 463
SpeI ACTAGT 1 cut(s) 122
Sse8387I CCTGCAGG 1 cut(s) 852
SseBI AGGCCT 1 cut(s) 1386
SsiI CCGC 2 cut(s) 332, 980
SspMI CTAG 3 cut(s) 74, 123, 408
SstI GAGCTC 2 cut(s) 462, 906
StuI AGGCCT 1 cut(s) 1386
StyD4I CCNGG 6 cut(s) 157, 355, 945, 1153, 1381, 1511
StyI CCWWGG 1 cut(s) 164
TaiI ACGT 2 cut(s) 606, 876
TaqI TCGA 3 cut(s) 707, 1323, 1330
TauI GCSGC 1 cut(s) 983
TfiI GAWTC 4 cut(s) 94, 517, 778, 1493
Tru1I TTAA 7 cut(s) 30, 236, 464, 584, 1098, 1163, 1232
Tru9I TTAA 7 cut(s) 30, 236, 464, 584, 1098, 1163, 1232
TscAI CASTG 1 cut(s) 736
TseFI GTSAC 1 cut(s) 940
Tsp45I GTSAC 1 cut(s) 940
TspDTI ATGAA 5 cut(s) 54, 480, 1197, 1359, 1540
TspRI CASTG 1 cut(s) 736
Tth111I GACNNNGTC 2 cut(s) 357, 739
Van91I CCANNNNNTGG 1 cut(s) 993
Vha464I CTTAAG 1 cut(s) 463
VpaK11BI GGWCC 4 cut(s) 652, 735, 1157, 1335
XapI RAATTY 2 cut(s) 18, 1346
XcmI CCANNNNNNNNNTGG 1 cut(s) 728
XmnI GAANNNNTTC 3 cut(s) 45, 341, 1350
XspI CTAG 3 cut(s) 74, 123, 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.