MD17G1000100.v1.1

iron ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0000132
Physical Location & Seq
Forward (+)
10879 .. 12686
1808 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1000100.v1.1.491

Sequence Viewer

Length: 1551 bp
ATGATGAAATTGATCAAAGCTCATCTGGATCAAGTTATGTTTCTAATTGACGAAACGCCCTATTTTCCATTTTTCACTTCTCTCCTTGTCTGCATCCTGGTGATTGTTTGGAAGCGATCAAGAGCCGGAGGCCTAAAGTCACCCCAAGGGCCATGGAAGCTGCCTGTTATTGGAAACTTGCATCAAATGGTCGGTCTGCTGCCACACCACACACTGAGAGATTTAGCCAAGAAACATGGACCCATCATGTACCTTAAACTCGGTCAATTAGACGCCGTGATTATTTCATCTGCCAAAGCTGCCCAGGAGGTGTTGAAGACACATGAGCTTAGATTTGCGCAGAGGCCTATAGTTTTGGCGGCAGAGGTTATATCTTTTGGTCAATCAAGTACTATCTTTGCTCCTTATGGAGATTTATGGAGATCGCTGAGAAAGATTTGTGTTTTTGAGCTACTGAGCGCGACACGTGTGCAGTCTTTCAGATCCGTAAGAGAAGAAGAGGTACGGAATCTTATTGAGTCCACTGGCTCAATGTCTCACGAGGGGCTTGCCATCAATTTTAGGGACAGGTGCTGCAGCTTCACAAGTGGCGTAGTGTCGAAGGCAGCATTTGGGAAAAAATGCAAAGACCAAAAGGAGTTCCTTTCGCTACTAGACGAAATACTCAAACTTGGTAGTGGATTTGATATTCCTGATTTGTTTCCTTCACTCAGTTTTCTTGTTTTCATTACTGGGTCGATCCCTGCTCTCAAAGACATAAAAAGCAAGCTCAATACGATTCTCGAACGTATCATCAACGATCATAAAATCAAAAGCAATGACAAAGCAGTGGAGGAGGAGGAAAATTTTGTTGACGTACTTCTAAAACTTAAAGAGTCCAACAAGGTGGAGTTCAATTTCACAACCAATCATATCAAAGATATGATTATGACTTCAGCTACTACCTTAGAATGGGCAATGTCAGAGTTGATGAGAAACCCAAGAATCATGAAGAGGGCTCAAGCTGAAGTGAGACGGTCAGTCCTCCAATTTGAAGGGAAAAAAAGAAAAGTTATTGAAGAAAGAGATGTTCAAAAAATGGACTACTTGAAATCGGTGGTGAAAGAAACTCTGAGGTTACACTCTCCAGCCCCTTTGCTCCCAAGAGAAGCAAGGGACACGGTTCAAATTGGCGGGTTCGAATTACCAGTTAAATCAAAAGTAATTATTAATCTATGGGCAATGGGAAGAGACCCAGAGATATGGGGGGCAGATGCTGAGTCTTTTAAGCCGGAGAGGTTTCAAGGTTCTTCTGTTGACTTTAAGGGTTTTGACTTTGAGTTCACCCCGTTTGGGGCCGGCAGAAGAATGTGTCCAGGCATGTTATTTGGTGTTACCATGGTTGAACTTGCTCTTGCTGAATTGCTCTACCGCTTCGATTGGAAACTGGCGAATGAGATGAATCCAGACGAACTTGACATGACGGAGACCTTTGGAGTGACCTGTAAGAGAAAGAATGCGTTGTACCTAATTGCCACCCCACATTTTACTTCAGTCAATGAGTCAGAGTGA

Protein Analysis

517

Amino Acids

58.63

Weight (kDa)

8.85

Isoelectric Point (pI)

36.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 48 - 500 3.7e-85 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 339
AccII CGCG 1 cut(s) 461
AciI CCGC 3 cut(s) 359, 1173, 1411
AclWI GGATC 3 cut(s) 36, 477, 733
AcsI RAATTY 1 cut(s) 844
AcuI CTGAAG 3 cut(s) 918, 1026, 1515
AcvI CACGTG 1 cut(s) 467
AcyI GRCGYC 1 cut(s) 273
AfaI GTAC 5 cut(s) 251, 391, 504, 858, 1505
AfiI CCNNNNNNNGG 4 cut(s) 170, 951, 1332, 1333
AflIII ACRYGT 2 cut(s) 464, 466
AgsI TTSAA 9 cut(s) 316, 895, 1034, 1058, 1073, 1090, 1166, 1283, 1385
AhdI GACNNNNNGTC 1 cut(s) 1019
AjnI CCWGG 3 cut(s) 96, 303, 1354
AluBI AGCT 9 cut(s) 20, 160, 299, 328, 451, 579, 769, 938, 1004
AluI AGCT 9 cut(s) 20, 160, 299, 328, 451, 579, 769, 938, 1004
Alw26I GTCTC 4 cut(s) 540, 1006, 1224, 1460
AlwI GGATC 3 cut(s) 36, 477, 733
AlwNI CAGNNNCTG 2 cut(s) 573, 1256
AoxI GGCC 4 cut(s) 130, 149, 344, 1335
ApeKI GCWGC 6 cut(s) 160, 199, 299, 573, 576, 605
ApoI RAATTY 1 cut(s) 844
ArsI GACNNNNNNTTYG 2 cut(s) 178, 210
AseI ATTAAT 1 cut(s) 1209
AspLEI GCGC 2 cut(s) 340, 461
AspS9I GGNCC 3 cut(s) 149, 239, 1335
AsuHPI GGTGA 4 cut(s) 112, 132, 1111, 1315
AsuII TTCGAA 1 cut(s) 1179
AvaII GGWCC 1 cut(s) 239
BanII GRGCYC 1 cut(s) 1000
BarI GAAGNNNNNNTAC 2 cut(s) 486, 518
BauI CACGAG 1 cut(s) 539
BbrPI CACGTG 1 cut(s) 467
BbsI GAAGAC 1 cut(s) 323
BbvI GCAGC 6 cut(s) 147, 186, 286, 560, 588, 617
BccI CCATC 2 cut(s) 251, 560
BceAI ACGGC 1 cut(s) 260
BcgI CGANNNNNNTGC 4 cut(s) 451, 485, 530, 564
BciT130I CCWGG 3 cut(s) 98, 305, 1356
BclI TGATCA 1 cut(s) 12
BcoDI GTCTC 4 cut(s) 540, 1006, 1224, 1460
BfaI CTAG 1 cut(s) 653
BfmI CTRYAG 2 cut(s) 348, 574
BisI GCNGC 7 cut(s) 161, 200, 300, 360, 574, 577, 606
BlsI GCNGC 7 cut(s) 162, 201, 301, 361, 575, 578, 607
BmcAI AGTACT 1 cut(s) 391
Bme1390I CCNGG 3 cut(s) 98, 305, 1356
Bme18I GGWCC 1 cut(s) 239
BmeRI GACNNNNNGTC 1 cut(s) 1019
BmgT120I GGNCC 3 cut(s) 149, 239, 1335
BmiI GGNNCC 2 cut(s) 241, 1336
BmrFI CCNGG 3 cut(s) 98, 305, 1356
BmrI ACTGGG 1 cut(s) 741
BmsI GCATC 3 cut(s) 102, 190, 1243
BmuI ACTGGG 1 cut(s) 741
BpiI GAAGAC 1 cut(s) 323
BpmI CTGGAG 1 cut(s) 1110
Bpu14I TTCGAA 1 cut(s) 1179
BpuEI CTTGAG 1 cut(s) 984
BsaAI YACGTR 1 cut(s) 467
BsaHI GRCGYC 1 cut(s) 273
BsaI GGTCTC 2 cut(s) 1224, 1460
BsaJI CCNNGG 4 cut(s) 145, 152, 303, 1377
Bsc4I CCNNNNNNNGG 4 cut(s) 170, 951, 1332, 1333
Bse118I RCCGGY 1 cut(s) 1337
Bse1I ACTGG 4 cut(s) 529, 736, 1187, 1431
Bse3DI GCAATG 3 cut(s) 823, 963, 1227
BseBI CCWGG 3 cut(s) 98, 305, 1356
BseDI CCNNGG 4 cut(s) 145, 152, 303, 1377
BseGI GGATG 1 cut(s) 93
BseLI CCNNNNNNNGG 4 cut(s) 170, 951, 1332, 1333
BseMI GCAATG 3 cut(s) 823, 963, 1227
BseMII CTCAG 6 cut(s) 206, 419, 446, 724, 1103, 1248
BseNI ACTGG 4 cut(s) 529, 736, 1187, 1431
BseRI GAGGAG 2 cut(s) 848, 851
BseXI GCAGC 6 cut(s) 147, 186, 286, 560, 588, 617
BsgI GTGCAG 1 cut(s) 491
Bsh1236I CGCG 1 cut(s) 461
BshFI GGCC 4 cut(s) 132, 151, 346, 1337
BsiSI CCGG 3 cut(s) 126, 1271, 1338
BslFI GGGAC 2 cut(s) 578, 1169
BslI CCNNNNNNNGG 4 cut(s) 170, 951, 1332, 1333
BsmAI GTCTC 4 cut(s) 540, 1006, 1224, 1460
BsmBI CGTCTC 1 cut(s) 1006
BsmFI GGGAC 2 cut(s) 578, 1169
BsmI GAATGC 1 cut(s) 1501
BsnI GGCC 4 cut(s) 132, 151, 346, 1337
Bso31I GGTCTC 2 cut(s) 1224, 1460
Bsp119I TTCGAA 1 cut(s) 1179
Bsp1286I GDGCHC 1 cut(s) 1000
Bsp143I GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
Bsp19I CCATGG 2 cut(s) 152, 1377
BspACI CCGC 3 cut(s) 359, 1173, 1411
BspANI GGCC 4 cut(s) 132, 151, 346, 1337
BspCNI CTCAG 6 cut(s) 207, 420, 447, 723, 1104, 1249
BspFNI CGCG 1 cut(s) 461
BspHI TCATGA 1 cut(s) 987
BspLI GGNNCC 2 cut(s) 241, 1336
BspMAI CTGCAG 1 cut(s) 578
BspPI GGATC 3 cut(s) 36, 477, 733
BspT104I TTCGAA 1 cut(s) 1179
BspTNI GGTCTC 2 cut(s) 1224, 1460
BsrDI GCAATG 3 cut(s) 823, 963, 1227
BsrFI RCCGGY 1 cut(s) 1337
BsrI ACTGG 4 cut(s) 529, 736, 1187, 1431
BssAI RCCGGY 1 cut(s) 1337
BssECI CCNNGG 4 cut(s) 145, 152, 303, 1377
BssMI GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
BssNI GRCGYC 1 cut(s) 273
BssSI CACGAG 1 cut(s) 539
BssT1I CCWWGG 3 cut(s) 145, 152, 1377
Bst2BI CACGAG 1 cut(s) 539
Bst2UI CCWGG 3 cut(s) 98, 305, 1356
Bst4CI ACNGT 2 cut(s) 1017, 1162
Bst6I CTCTTC 3 cut(s) 492, 986, 1222
BstACI GRCGYC 1 cut(s) 273
BstBAI YACGTR 1 cut(s) 467
BstBI TTCGAA 1 cut(s) 1179
BstC8I GCNNGC 3 cut(s) 549, 767, 1339
BstDEI CTNAG 8 cut(s) 215, 329, 428, 455, 710, 946, 1112, 1257
BstDSI CCRYGG 2 cut(s) 152, 1377
BstF5I GGATG 1 cut(s) 93
BstFNI CGCG 1 cut(s) 461
BstHHI GCGC 2 cut(s) 340, 461
BstKTI GATC 7 cut(s) 15, 31, 119, 425, 485, 741, 802
BstMAI GTCTC 4 cut(s) 540, 1006, 1224, 1460
BstMBI GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
BstMWI GCNNNNNNNGC 2 cut(s) 157, 299
BstNI CCWGG 3 cut(s) 98, 305, 1356
BstNSI RCATGY 1 cut(s) 1363
BstSCI CCNGG 3 cut(s) 96, 303, 1354
BstSFI CTRYAG 2 cut(s) 348, 574
BstUI CGCG 1 cut(s) 461
BstV1I GCAGC 6 cut(s) 147, 186, 286, 560, 588, 617
BstV2I GAAGAC 1 cut(s) 323
BstX2I RGATCY 1 cut(s) 482
BstXI CCANNNNNNTGG 2 cut(s) 886, 1242
BstYI RGATCY 1 cut(s) 482
BsuRI GGCC 4 cut(s) 132, 151, 346, 1337
BtgI CCRYGG 2 cut(s) 152, 1377
BtsCI GGATG 1 cut(s) 93
BtsI GCAGTG 1 cut(s) 834
BtsIMutI CAGTG 3 cut(s) 212, 522, 834
Cac8I GCNNGC 3 cut(s) 549, 767, 1339
CaiI CAGNNNCTG 2 cut(s) 573, 1256
CciI TCATGA 1 cut(s) 987
CfoI GCGC 2 cut(s) 340, 461
Cfr10I RCCGGY 1 cut(s) 1337
Cfr13I GGNCC 3 cut(s) 149, 239, 1335
CseI GACGC 1 cut(s) 281
Csp6I GTAC 5 cut(s) 250, 390, 503, 857, 1504
CviAII CATG 8 cut(s) 153, 236, 247, 323, 988, 1360, 1378, 1459
CviQI GTAC 5 cut(s) 250, 390, 503, 857, 1504
DdeI CTNAG 8 cut(s) 215, 329, 428, 455, 710, 946, 1112, 1257
DpnI GATC 7 cut(s) 14, 30, 118, 424, 484, 740, 801
DpnII GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
DriI GACNNNNNGTC 1 cut(s) 1019
Eam1104I CTCTTC 3 cut(s) 492, 986, 1222
Eam1105I GACNNNNNGTC 1 cut(s) 1019
EarI CTCTTC 3 cut(s) 492, 986, 1222
Eco130I CCWWGG 3 cut(s) 145, 152, 1377
Eco147I AGGCCT 2 cut(s) 132, 346
Eco24I GRGCYC 1 cut(s) 1000
Eco31I GGTCTC 2 cut(s) 1224, 1460
Eco47I GGWCC 1 cut(s) 239
Eco57I CTGAAG 3 cut(s) 918, 1026, 1515
Eco72I CACGTG 1 cut(s) 467
EcoRII CCWGG 3 cut(s) 96, 303, 1354
EcoT14I CCWWGG 3 cut(s) 145, 152, 1377
EcoT38I GRGCYC 1 cut(s) 1000
ErhI CCWWGG 3 cut(s) 145, 152, 1377
Esp3I CGTCTC 1 cut(s) 1006
FaeI CATG 8 cut(s) 156, 239, 250, 326, 991, 1363, 1381, 1462
FaqI GGGAC 2 cut(s) 578, 1169
FatI CATG 8 cut(s) 152, 235, 246, 322, 987, 1359, 1377, 1458
FauI CCCGC 1 cut(s) 1166
FbaI TGATCA 1 cut(s) 12
Fnu4HI GCNGC 7 cut(s) 161, 200, 300, 360, 574, 577, 606
FokI GGATG 1 cut(s) 80
FriOI GRGCYC 1 cut(s) 1000
Fsp4HI GCNGC 7 cut(s) 161, 200, 300, 360, 574, 577, 606
FspBI CTAG 1 cut(s) 653
FspI TGCGCA 1 cut(s) 339
GlaI GCGC 2 cut(s) 339, 460
GluI GCNGC 7 cut(s) 161, 200, 300, 360, 574, 577, 606
GsuI CTGGAG 1 cut(s) 1110
HaeIII GGCC 4 cut(s) 132, 151, 346, 1337
HapII CCGG 3 cut(s) 126, 1271, 1338
HgaI GACGC 1 cut(s) 281
HhaI GCGC 2 cut(s) 340, 461
Hin1I GRCGYC 1 cut(s) 273
Hin1II CATG 8 cut(s) 156, 239, 250, 326, 991, 1363, 1381, 1462
Hin6I GCGC 2 cut(s) 338, 459
HinP1I GCGC 2 cut(s) 338, 459
HincII GTYRAC 2 cut(s) 853, 1297
HindII GTYRAC 2 cut(s) 853, 1297
HinfI GANTC 8 cut(s) 508, 518, 778, 875, 984, 1259, 1441, 1541
HpaII CCGG 3 cut(s) 126, 1271, 1338
HphI GGTGA 4 cut(s) 112, 132, 1111, 1315
Hpy166II GTNNAC 4 cut(s) 522, 853, 1297, 1323
Hpy188I TCNGA 4 cut(s) 482, 964, 1113, 1546
Hpy188III TCNNGA 7 cut(s) 26, 120, 539, 692, 782, 988, 1445
Hpy8I GTNNAC 4 cut(s) 522, 853, 1297, 1323
HpyAV CCTTC 3 cut(s) 595, 714, 1028
HpyCH4III ACNGT 2 cut(s) 1017, 1162
HpyCH4IV ACGT 3 cut(s) 466, 787, 855
HpyCH4V TGCA 5 cut(s) 93, 181, 472, 576, 624
HpyF10VI GCNNNNNNNGC 2 cut(s) 157, 299
HpyF3I CTNAG 8 cut(s) 215, 329, 428, 455, 710, 946, 1112, 1257
HpySE526I ACGT 3 cut(s) 466, 787, 855
Hsp92I GRCGYC 1 cut(s) 273
Hsp92II CATG 8 cut(s) 156, 239, 250, 326, 991, 1363, 1381, 1462
HspAI GCGC 2 cut(s) 338, 459
KroI GCCGGC 1 cut(s) 1337
KroNI GCCGGC 1 cut(s) 1339
Ksp22I TGATCA 1 cut(s) 12
Kzo9I GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
LmnI GCTCC 2 cut(s) 406, 1143
Lsp1109I GCAGC 6 cut(s) 147, 186, 286, 560, 588, 617
LweI GCATC 3 cut(s) 102, 190, 1243
MaeI CTAG 1 cut(s) 653
MaeII ACGT 3 cut(s) 466, 787, 855
MaeIII GTNAC 4 cut(s) 138, 1116, 1372, 1477
MalI GATC 7 cut(s) 14, 30, 118, 424, 484, 740, 801
MboI GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
MboII GAAGA 8 cut(s) 328, 506, 509, 1003, 1070, 1239, 1281, 1356
MflI RGATCY 1 cut(s) 482
MhlI GDGCHC 1 cut(s) 1000
MlyI GAGTC 4 cut(s) 527, 884, 1268, 1550
MmeI TCCRAC 1 cut(s) 903
MroNI GCCGGC 1 cut(s) 1337
MseI TTAA 6 cut(s) 255, 870, 1191, 1209, 1266, 1302
MslI CAYNNNNRTG 1 cut(s) 98
MspI CCGG 3 cut(s) 126, 1271, 1338
MspR9I CCNGG 3 cut(s) 98, 305, 1356
Mva1269I GAATGC 1 cut(s) 1501
MvaI CCWGG 3 cut(s) 98, 305, 1356
MvnI CGCG 1 cut(s) 461
MwoI GCNNNNNNNGC 2 cut(s) 157, 299
NaeI GCCGGC 1 cut(s) 1339
NcoI CCATGG 2 cut(s) 152, 1377
NdeII GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
NgoMIV GCCGGC 1 cut(s) 1337
NlaIII CATG 8 cut(s) 156, 239, 250, 326, 991, 1363, 1381, 1462
NlaIV GGNNCC 2 cut(s) 241, 1336
NmuCI GTSAC 2 cut(s) 138, 1477
NsbI TGCGCA 1 cut(s) 339
NspI RCATGY 1 cut(s) 1363
NspV TTCGAA 1 cut(s) 1179
PagI TCATGA 1 cut(s) 987
PceI AGGCCT 2 cut(s) 132, 346
PctI GAATGC 1 cut(s) 1501
PdiI GCCGGC 1 cut(s) 1339
PfeI GAWTC 4 cut(s) 508, 778, 984, 1441
PkrI GCNGC 7 cut(s) 162, 201, 301, 361, 575, 578, 607
PleI GAGTC 4 cut(s) 526, 883, 1267, 1549
PmaCI CACGTG 1 cut(s) 467
PmlI CACGTG 1 cut(s) 467
PpsI GAGTC 4 cut(s) 526, 883, 1267, 1549
Ppu21I YACGTR 1 cut(s) 467
PshBI ATTAAT 1 cut(s) 1209
Psp6I CCWGG 3 cut(s) 96, 303, 1354
PspCI CACGTG 1 cut(s) 467
PspGI CCWGG 3 cut(s) 96, 303, 1354
PspN4I GGNNCC 2 cut(s) 241, 1336
PspPI GGNCC 3 cut(s) 149, 239, 1335
PstI CTGCAG 1 cut(s) 578
PstNI CAGNNNCTG 2 cut(s) 573, 1256
PsuI RGATCY 1 cut(s) 482
RsaI GTAC 5 cut(s) 251, 391, 504, 858, 1505
RsaNI GTAC 5 cut(s) 250, 390, 503, 857, 1504
RseI CAYNNNNRTG 1 cut(s) 98
SaqAI TTAA 6 cut(s) 255, 870, 1191, 1209, 1266, 1302
SatI GCNGC 7 cut(s) 161, 200, 300, 360, 574, 577, 606
Sau3AI GATC 7 cut(s) 12, 28, 116, 422, 482, 738, 799
Sau96I GGNCC 3 cut(s) 149, 239, 1335
ScaI AGTACT 1 cut(s) 391
SchI GAGTC 4 cut(s) 527, 884, 1268, 1550
ScrFI CCNGG 3 cut(s) 98, 305, 1356
SduI GDGCHC 1 cut(s) 1000
SfaNI GCATC 3 cut(s) 102, 190, 1243
SfcI CTRYAG 2 cut(s) 348, 574
SfuI TTCGAA 1 cut(s) 1179
SinI GGWCC 1 cut(s) 239
SmiMI CAYNNNNRTG 1 cut(s) 98
SmlI CTYRAG 1 cut(s) 999
SmoI CTYRAG 1 cut(s) 999
SseBI AGGCCT 2 cut(s) 132, 346
SsiI CCGC 3 cut(s) 359, 1173, 1411
SspMI CTAG 1 cut(s) 653
StuI AGGCCT 2 cut(s) 132, 346
StyD4I CCNGG 3 cut(s) 96, 303, 1354
StyI CCWWGG 3 cut(s) 145, 152, 1377
TaaI ACNGT 2 cut(s) 1017, 1162
TaiI ACGT 3 cut(s) 469, 790, 858
TaqI TCGA 5 cut(s) 599, 737, 783, 1179, 1416
TaqII GACCGA 2 cut(s) 182, 251
TatI WGTACW 1 cut(s) 389
TauI GCSGC 1 cut(s) 362
TfiI GAWTC 4 cut(s) 508, 778, 984, 1441
Tru1I TTAA 6 cut(s) 255, 870, 1191, 1209, 1266, 1302
Tru9I TTAA 6 cut(s) 255, 870, 1191, 1209, 1266, 1302
TscAI CASTG 3 cut(s) 219, 529, 834
TseFI GTSAC 2 cut(s) 138, 1477
TseI GCWGC 6 cut(s) 160, 199, 299, 573, 576, 605
Tsp45I GTSAC 2 cut(s) 138, 1477
TspDTI ATGAA 5 cut(s) 20, 276, 715, 1004, 1454
TspGWI ACGGA 3 cut(s) 475, 520, 1478
TspRI CASTG 3 cut(s) 219, 529, 834
VpaK11BI GGWCC 1 cut(s) 239
VspI ATTAAT 1 cut(s) 1209
XapI RAATTY 1 cut(s) 844
XceI RCATGY 1 cut(s) 1363
XspI CTAG 1 cut(s) 653
ZrmI AGTACT 1 cut(s) 391
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.