RchiOBHm_Chr5g0054551

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Reverse (-)
57160420 .. 57160905
486 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ33168

Sequence Viewer

Length: 486 bp
ATGGTAAAAACGCCACAAGTGATGGAAAAGGCACAAATAGAGGTGAGGCAAGTCTTCGGTGCTAAAGGAAATGTCTATGAAACAGGTCTTCAGCAACTAAAATTCCTGAAGGCGATGATCAAAGTGACTTTGAGATTACACCCACCCATTCCTCTCCTACTTCCAAAAGAATCTAGTGAAAGCTGTGAGATTAATGGATATGGGATACCTGTGAAAACCAAAGTGATTGTGAACGCATGGGTGATTGGGAGAGATCCCAAGCATTGGATTGAAGCAGAAACATTTCATCCAGAGAGATTCCTTGATAGTTGCATTGATTACAGGGGTGCTAATTTCGAATTTATACCATTTGGTGGAGGAAGGAGGATATGTCCTGGAATAGCATTTGCTACACCCAACATTGAATTCCTACTTGCACAACTGCTATTCCATTTCAACTGGAAGCTCTCAGAAGAGGGTTTGAACATGACTGAGAATTTCGAGTGA
Functional Annotation

Protein Analysis

161

Amino Acids

18.38

Weight (kDa)

6.91

Isoelectric Point (pI)

37.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 1 - 155 2.9e-47 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 264, 353
AclWI GGATC 1 cut(s) 248
AcsI RAATTY 4 cut(s) 101, 338, 404, 475
AcuI CTGAAG 2 cut(s) 74, 128
AfiI CCNNNNNNNGG 2 cut(s) 264, 353
AgsI TTSAA 4 cut(s) 272, 404, 436, 463
AjnI CCWGG 1 cut(s) 373
AjuI GAANNNNNNNTTGG 2 cut(s) 389, 421
AluBI AGCT 2 cut(s) 183, 445
AluI AGCT 2 cut(s) 183, 445
AlwI GGATC 1 cut(s) 248
ApoI RAATTY 4 cut(s) 101, 338, 404, 475
AseI ATTAAT 1 cut(s) 192
Asp700I GAANNNNTTC 1 cut(s) 282
AsuHPI GGTGA 2 cut(s) 55, 253
AsuII TTCGAA 1 cut(s) 336
BbsI GAAGAC 2 cut(s) 46, 80
BccI CCATC 1 cut(s) 16
BciT130I CCWGG 1 cut(s) 375
BciVI GTATCC 1 cut(s) 198
BclI TGATCA 1 cut(s) 117
BfaI CTAG 1 cut(s) 174
BfuI GTATCC 1 cut(s) 198
Bme1390I CCNGG 1 cut(s) 375
BmrFI CCNGG 1 cut(s) 375
BpiI GAAGAC 2 cut(s) 46, 80
Bpu14I TTCGAA 1 cut(s) 336
BsaXI ACNNNNNCTCC 2 cut(s) 355, 385
Bsc4I CCNNNNNNNGG 2 cut(s) 264, 353
Bse1I ACTGG 1 cut(s) 443
BseBI CCWGG 1 cut(s) 375
BseGI GGATG 1 cut(s) 286
BseLI CCNNNNNNNGG 2 cut(s) 264, 353
BseMII CTCAG 2 cut(s) 462, 462
BseNI ACTGG 1 cut(s) 443
BslI CCNNNNNNNGG 2 cut(s) 264, 353
Bsp119I TTCGAA 1 cut(s) 336
Bsp143I GATC 2 cut(s) 117, 253
BspCNI CTCAG 2 cut(s) 461, 463
BspPI GGATC 1 cut(s) 248
BspT104I TTCGAA 1 cut(s) 336
BsrI ACTGG 1 cut(s) 443
BssMI GATC 2 cut(s) 117, 253
Bst2UI CCWGG 1 cut(s) 375
Bst6I CTCTTC 1 cut(s) 447
BstBI TTCGAA 1 cut(s) 336
BstDEI CTNAG 2 cut(s) 448, 471
BstF5I GGATG 1 cut(s) 286
BstKTI GATC 2 cut(s) 120, 256
BstMBI GATC 2 cut(s) 117, 253
BstNI CCWGG 1 cut(s) 375
BstSCI CCNGG 1 cut(s) 373
BstV2I GAAGAC 2 cut(s) 46, 80
BstX2I RGATCY 1 cut(s) 253
BstYI RGATCY 1 cut(s) 253
BsuI GTATCC 1 cut(s) 198
BtgZI GCGATG 1 cut(s) 128
BtsCI GGATG 1 cut(s) 286
CviAII CATG 2 cut(s) 237, 466
CviJI RGCY 2 cut(s) 183, 445
CviKI_1 RGCY 2 cut(s) 183, 445
DdeI CTNAG 2 cut(s) 448, 471
DpnI GATC 2 cut(s) 119, 255
DpnII GATC 2 cut(s) 117, 253
Eam1104I CTCTTC 1 cut(s) 447
EarI CTCTTC 1 cut(s) 447
Eco57I CTGAAG 2 cut(s) 74, 128
EcoRI GAATTC 1 cut(s) 404
EcoRII CCWGG 1 cut(s) 373
FaeI CATG 2 cut(s) 240, 469
FaiI YATR 6 cut(s) 78, 201, 238, 344, 370, 467
FatI CATG 2 cut(s) 236, 465
FbaI TGATCA 1 cut(s) 117
FokI GGATG 1 cut(s) 273
FspBI CTAG 1 cut(s) 174
Hin1II CATG 2 cut(s) 240, 469
HinfI GANTC 2 cut(s) 170, 297
HphI GGTGA 2 cut(s) 55, 253
Hpy166II GTNNAC 1 cut(s) 232
Hpy188I TCNGA 1 cut(s) 451
Hpy188III TCNNGA 2 cut(s) 106, 290
Hpy8I GTNNAC 1 cut(s) 232
HpyAV CCTTC 2 cut(s) 103, 354
HpyCH4V TGCA 2 cut(s) 312, 416
HpyF3I CTNAG 2 cut(s) 448, 471
Hsp92II CATG 2 cut(s) 240, 469
Ksp22I TGATCA 1 cut(s) 117
Kzo9I GATC 2 cut(s) 117, 253
LpnPI CCDG 8 cut(s) 69, 119, 222, 303, 307, 360, 387, 424
MaeI CTAG 1 cut(s) 174
MaeIII GTNAC 1 cut(s) 124
MalI GATC 2 cut(s) 119, 255
MboI GATC 2 cut(s) 117, 253
MboII GAAGA 3 cut(s) 46, 80, 464
MflI RGATCY 1 cut(s) 253
MluCI AATT 5 cut(s) 101, 331, 338, 404, 475
MnlI CCTC 6 cut(s) 34, 39, 162, 350, 357, 448
MroXI GAANNNNTTC 1 cut(s) 282
MseI TTAA 1 cut(s) 192
MspR9I CCNGG 1 cut(s) 375
MvaI CCWGG 1 cut(s) 375
NdeII GATC 2 cut(s) 117, 253
NlaIII CATG 2 cut(s) 240, 469
NmuCI GTSAC 1 cut(s) 124
NspV TTCGAA 1 cut(s) 336
PdmI GAANNNNTTC 1 cut(s) 282
PfeI GAWTC 2 cut(s) 170, 297
PflMI CCANNNNNTGG 2 cut(s) 264, 353
PfoI TCCNGGA 1 cut(s) 373
PshBI ATTAAT 1 cut(s) 192
Psp6I CCWGG 1 cut(s) 373
PspGI CCWGG 1 cut(s) 373
PsuI RGATCY 1 cut(s) 253
SaqAI TTAA 1 cut(s) 192
Sau3AI GATC 2 cut(s) 117, 253
ScrFI CCNGG 1 cut(s) 375
SetI ASST 5 cut(s) 45, 88, 185, 211, 447
SfuI TTCGAA 1 cut(s) 336
Sse9I AATT 5 cut(s) 101, 331, 338, 404, 475
SspMI CTAG 1 cut(s) 174
StyD4I CCNGG 1 cut(s) 373
TaqI TCGA 2 cut(s) 336, 480
TasI AATT 5 cut(s) 101, 331, 338, 404, 475
TfiI GAWTC 2 cut(s) 170, 297
Tru1I TTAA 1 cut(s) 192
Tru9I TTAA 1 cut(s) 192
TseFI GTSAC 1 cut(s) 124
Tsp45I GTSAC 1 cut(s) 124
TspDTI ATGAA 2 cut(s) 93, 275
Van91I CCANNNNNTGG 2 cut(s) 264, 353
VspI ATTAAT 1 cut(s) 192
XapI RAATTY 4 cut(s) 101, 338, 404, 475
XmnI GAANNNNTTC 1 cut(s) 282
XspI CTAG 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.