Rorug05G0286600

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
Physical Location & Seq
Forward (+)
32890918 .. 32892451
1534 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0286600.1

Sequence Viewer

Length: 519 bp
ATGGATCGTAAATCTTCTTATCTTACTGACTTGGGGTTGGGCTCTGCGATTGCTTTTGTTGGTGATGAAGACCTTGCTGAGAATGTTGAAACTGAATATGATGAACAACCGGCAGGTGGTAAGGTGGAAGAATGGGAAGATACAATTCAAGACAGTGAACATGTTCAAGATCAGCTGCCTGTTATTGATCTTAACTATTTGAGCATAGTGGAAGGACTGGTGGATTTGAGTCCTGAAAAGCTAAAGAAGGGTATTCTTTACGATGCAAATGTTCCGGGTGAAGGGGAGCAGAAGGTTATGTCGTACATTCGTCTTCAAAGAAATCTTCTTGGAATCAGAGAAGCGTTGGAACATATTCGCAAGCTCAAGAATAAAGAGGTTATGCTTCTTCCCGGGTATTTTGAGACTTTGGTGAAAGGACTGTGCAGGGCTAATAGATTTGCAGATGCTTTGGAGATTTTGGATATTACGAAGAAAAGAGATTTTGTTGATAAGAATGTTTACTGGATTATTACTTGA
Functional Annotation

Protein Analysis

172

Amino Acids

19.59

Weight (kDa)

4.65

Isoelectric Point (pI)

35.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 104
Acc36I ACCTGC 1 cut(s) 104
AclWI GGATC 1 cut(s) 12
AfaI GTAC 1 cut(s) 305
AfiI CCNNNNNNNGG 2 cut(s) 116, 281
AflIII ACRYGT 1 cut(s) 160
AgsI TTSAA 4 cut(s) 89, 149, 167, 317
AluBI AGCT 3 cut(s) 175, 241, 364
AluI AGCT 3 cut(s) 175, 241, 364
Alw26I GTCTC 1 cut(s) 398
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 392
ApeKI GCWGC 1 cut(s) 175
Asp700I GAANNNNTTC 2 cut(s) 162, 354
AsuC2I CCSGG 3 cut(s) 276, 393, 394
AsuHPI GGTGA 3 cut(s) 74, 290, 424
AvaI CYCGRG 1 cut(s) 392
BanII GRGCYC 1 cut(s) 44
BbsI GAAGAC 2 cut(s) 75, 305
BbvI GCAGC 1 cut(s) 162
BcnI CCSGG 3 cut(s) 276, 393, 394
BcoDI GTCTC 1 cut(s) 398
BfuAI ACCTGC 1 cut(s) 104
BisI GCNGC 1 cut(s) 176
BlsI GCNGC 1 cut(s) 177
Bme1390I CCNGG 3 cut(s) 276, 393, 394
BmeT110I CYCGRG 1 cut(s) 392
BmrFI CCNGG 3 cut(s) 276, 393, 394
BmsI GCATC 2 cut(s) 253, 436
BpiI GAAGAC 2 cut(s) 75, 305
BpuEI CTTGAG 1 cut(s) 350
BpuMI CCSGG 3 cut(s) 276, 393, 394
BsaJI CCNNGG 1 cut(s) 392
Bsc4I CCNNNNNNNGG 2 cut(s) 116, 281
Bse118I RCCGGY 1 cut(s) 109
Bse1I ACTGG 2 cut(s) 222, 509
BseDI CCNNGG 1 cut(s) 392
BseLI CCNNNNNNNGG 2 cut(s) 116, 281
BseMII CTCAG 1 cut(s) 69
BseNI ACTGG 2 cut(s) 222, 509
BseXI GCAGC 1 cut(s) 162
BsgI GTGCAG 1 cut(s) 445
BsiHKCI CYCGRG 1 cut(s) 392
BsiSI CCGG 3 cut(s) 110, 275, 393
BslI CCNNNNNNNGG 2 cut(s) 116, 281
BsmAI GTCTC 1 cut(s) 398
BsoBI CYCGRG 1 cut(s) 392
Bsp1286I GDGCHC 1 cut(s) 44
Bsp143I GATC 3 cut(s) 4, 169, 187
BspCNI CTCAG 1 cut(s) 70
BspMI ACCTGC 1 cut(s) 104
BspPI GGATC 1 cut(s) 12
BsrFI RCCGGY 1 cut(s) 109
BsrI ACTGG 2 cut(s) 222, 509
BssAI RCCGGY 1 cut(s) 109
BssECI CCNNGG 1 cut(s) 392
BssMI GATC 3 cut(s) 4, 169, 187
Bst4CI ACNGT 2 cut(s) 155, 423
BstC8I GCNNGC 1 cut(s) 362
BstDEI CTNAG 1 cut(s) 78
BstKTI GATC 3 cut(s) 7, 172, 190
BstMAI GTCTC 1 cut(s) 398
BstMBI GATC 3 cut(s) 4, 169, 187
BstNSI RCATGY 1 cut(s) 164
BstSCI CCNGG 3 cut(s) 274, 391, 392
BstV1I GCAGC 1 cut(s) 162
BstV2I GAAGAC 2 cut(s) 75, 305
BtsIMutI CAGTG 1 cut(s) 160
BveI ACCTGC 1 cut(s) 104
Cac8I GCNNGC 1 cut(s) 362
Cfr10I RCCGGY 1 cut(s) 109
Cfr9I CCCGGG 1 cut(s) 392
Csp6I GTAC 1 cut(s) 304
CviAII CATG 1 cut(s) 161
CviJI RGCY 5 cut(s) 42, 175, 241, 364, 431
CviKI_1 RGCY 5 cut(s) 42, 175, 241, 364, 431
CviQI GTAC 1 cut(s) 304
DdeI CTNAG 1 cut(s) 78
DpnI GATC 3 cut(s) 6, 171, 189
DpnII GATC 3 cut(s) 4, 169, 187
Eco24I GRGCYC 1 cut(s) 44
Eco88I CYCGRG 1 cut(s) 392
EcoT38I GRGCYC 1 cut(s) 44
FaeI CATG 1 cut(s) 164
FaiI YATR 6 cut(s) 99, 162, 206, 299, 354, 383
FatI CATG 1 cut(s) 160
Fnu4HI GCNGC 1 cut(s) 176
FriOI GRGCYC 1 cut(s) 44
Fsp4HI GCNGC 1 cut(s) 176
GluI GCNGC 1 cut(s) 176
HapII CCGG 3 cut(s) 110, 275, 393
Hin1II CATG 1 cut(s) 164
HinfI GANTC 2 cut(s) 229, 333
HpaII CCGG 3 cut(s) 110, 275, 393
HphI GGTGA 3 cut(s) 74, 290, 424
Hpy166II GTNNAC 2 cut(s) 158, 502
Hpy188I TCNGA 1 cut(s) 338
Hpy188III TCNNGA 4 cut(s) 149, 167, 233, 367
Hpy8I GTNNAC 2 cut(s) 158, 502
HpyAV CCTTC 4 cut(s) 206, 241, 275, 286
HpyCH4III ACNGT 2 cut(s) 155, 423
HpyCH4V TGCA 3 cut(s) 266, 426, 443
HpyF3I CTNAG 1 cut(s) 78
Hsp92II CATG 1 cut(s) 164
Kzo9I GATC 3 cut(s) 4, 169, 187
LmnI GCTCC 1 cut(s) 286
LpnPI CCDG 9 cut(s) 99, 123, 192, 203, 246, 288, 406, 412, 490
Lsp1109I GCAGC 1 cut(s) 162
LweI GCATC 2 cut(s) 253, 436
MalI GATC 3 cut(s) 6, 171, 189
MboI GATC 3 cut(s) 4, 169, 187
MboII GAAGA 8 cut(s) 6, 80, 140, 149, 305, 317, 380, 484
MhlI GDGCHC 1 cut(s) 44
MluCI AATT 1 cut(s) 144
MlyI GAGTC 1 cut(s) 238
MmeI TCCRAC 1 cut(s) 327
MnlI CCTC 1 cut(s) 370
MroXI GAANNNNTTC 2 cut(s) 162, 354
MseI TTAA 1 cut(s) 192
MspA1I CMGCKG 1 cut(s) 175
MspI CCGG 3 cut(s) 110, 275, 393
MspR9I CCNGG 3 cut(s) 276, 393, 394
NciI CCSGG 3 cut(s) 276, 393, 394
NdeII GATC 3 cut(s) 4, 169, 187
NlaIII CATG 1 cut(s) 164
NspI RCATGY 1 cut(s) 164
PaqCI CACCTGC 1 cut(s) 104
PciI ACATGT 1 cut(s) 160
PdmI GAANNNNTTC 2 cut(s) 162, 354
PfeI GAWTC 1 cut(s) 333
PkrI GCNGC 1 cut(s) 177
PleI GAGTC 1 cut(s) 237
PpsI GAGTC 1 cut(s) 237
PscI ACATGT 1 cut(s) 160
PvuII CAGCTG 1 cut(s) 175
RsaI GTAC 1 cut(s) 305
RsaNI GTAC 1 cut(s) 304
SaqAI TTAA 1 cut(s) 192
SatI GCNGC 1 cut(s) 176
Sau3AI GATC 3 cut(s) 4, 169, 187
SchI GAGTC 1 cut(s) 238
ScrFI CCNGG 3 cut(s) 276, 393, 394
SduI GDGCHC 1 cut(s) 44
SetI ASST 8 cut(s) 75, 118, 126, 177, 243, 297, 366, 381
SfaNI GCATC 2 cut(s) 253, 436
SmaI CCCGGG 1 cut(s) 394
SmlI CTYRAG 1 cut(s) 365
SmoI CTYRAG 1 cut(s) 365
Sse9I AATT 1 cut(s) 144
StyD4I CCNGG 3 cut(s) 274, 391, 392
TaaI ACNGT 2 cut(s) 155, 423
TasI AATT 1 cut(s) 144
TfiI GAWTC 1 cut(s) 333
Tru1I TTAA 1 cut(s) 192
Tru9I TTAA 1 cut(s) 192
TscAI CASTG 1 cut(s) 160
TseI GCWGC 1 cut(s) 175
TspDTI ATGAA 2 cut(s) 81, 117
TspMI CCCGGG 1 cut(s) 392
TspRI CASTG 1 cut(s) 160
XceI RCATGY 1 cut(s) 164
XmaI CCCGGG 1 cut(s) 392
XmnI GAANNNNTTC 2 cut(s) 162, 354
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.