Rmu_sc0002655.1_g000018

Cytochrome p450

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002655.1
Physical Location & Seq
Reverse (-)
90464 .. 90979
516 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002655.1_g000018.1.cds

Sequence Viewer

Length: 516 bp
atggcgacatcttcgctttcaggccactcctgcttgctccggatatcatctcttagcggtgcaagcattggctttgcaccatatagagaattctggagacaaatgtgcaagatctgcggtttagtgctgctgaactcgacaagggtggattcatttcaatggatcagagaagaagaggtatctcatttgctcaaattcattcatgtcaacattggatcacctatcaaccttggggagcagattttttcaatgacatatggaatgacagtcatagtggcctttgataacaagtgtaaagaacacgaagcactcataatagctgtcagggaaggtgcagaggcaacatgtgggtttgcagtcacagatgtgttcttttctatcaaagtacttcatgtgatcagtgggatgagttctaaacttgagaaaattcatagagaactagatgagatactcgaaaatattgttaaagatcataaaactatcaagacaagtgatacacctaaaataggcgtataa
Functional Annotation

Protein Analysis

171

Amino Acids

19.06

Weight (kDa)

6.65

Isoelectric Point (pI)

32.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 39
AciI CCGC 2 cut(s) 57, 117
AclWI GGATC 2 cut(s) 170, 223
AcsI RAATTY 3 cut(s) 89, 194, 426
AfaI GTAC 1 cut(s) 387
AfiI CCNNNNNNNGG 1 cut(s) 506
AflIII ACRYGT 1 cut(s) 344
AgsI TTSAA 2 cut(s) 158, 249
AleI CACNNNNGTG 1 cut(s) 365
AluBI AGCT 1 cut(s) 320
AluI AGCT 1 cut(s) 320
Alw26I GTCTC 1 cut(s) 91
AlwI GGATC 2 cut(s) 170, 223
Aor13HI TCCGGA 1 cut(s) 39
AoxI GGCC 2 cut(s) 22, 276
ApeKI GCWGC 1 cut(s) 127
ApoI RAATTY 3 cut(s) 89, 194, 426
AsuHPI GGTGA 1 cut(s) 210
BbvI GCAGC 1 cut(s) 114
BclI TGATCA 1 cut(s) 396
BcoDI GTCTC 1 cut(s) 91
BfaI CTAG 1 cut(s) 440
BglII AGATCT 1 cut(s) 111
BisI GCNGC 1 cut(s) 128
BlsI GCNGC 1 cut(s) 129
BmcAI AGTACT 1 cut(s) 387
BpmI CTGGAG 1 cut(s) 115
BpuEI CTTGAG 1 cut(s) 440
BsaJI CCNNGG 1 cut(s) 229
BsaWI WCCGGW 1 cut(s) 39
Bsc4I CCNNNNNNNGG 1 cut(s) 506
BseAI TCCGGA 1 cut(s) 39
BseDI CCNNGG 1 cut(s) 229
BseGI GGATG 1 cut(s) 411
BseLI CCNNNNNNNGG 1 cut(s) 506
BseXI GCAGC 1 cut(s) 114
BsgI GTGCAG 1 cut(s) 354
BshFI GGCC 2 cut(s) 24, 278
BsiSI CCGG 1 cut(s) 40
BslI CCNNNNNNNGG 1 cut(s) 506
BsmAI GTCTC 1 cut(s) 91
BsnI GGCC 2 cut(s) 24, 278
Bsp13I TCCGGA 1 cut(s) 39
Bsp143I GATC 5 cut(s) 111, 162, 215, 396, 469
BspACI CCGC 2 cut(s) 57, 117
BspANI GGCC 2 cut(s) 24, 278
BspEI TCCGGA 1 cut(s) 39
BspPI GGATC 2 cut(s) 170, 223
BssECI CCNNGG 1 cut(s) 229
BssMI GATC 5 cut(s) 111, 162, 215, 396, 469
BssT1I CCWWGG 1 cut(s) 229
Bst4CI ACNGT 1 cut(s) 268
Bst6I CTCTTC 1 cut(s) 168
BstAPI GCANNNNNTGC 1 cut(s) 114
BstC8I GCNNGC 2 cut(s) 35, 64
BstDEI CTNAG 1 cut(s) 53
BstENI CCTNNNNNAGG 1 cut(s) 504
BstF5I GGATG 1 cut(s) 411
BstKTI GATC 5 cut(s) 114, 165, 218, 399, 472
BstMAI GTCTC 1 cut(s) 91
BstMBI GATC 5 cut(s) 111, 162, 215, 396, 469
BstMWI GCNNNNNNNGC 3 cut(s) 30, 63, 114
BstNSI RCATGY 1 cut(s) 348
BstV1I GCAGC 1 cut(s) 114
BstX2I RGATCY 1 cut(s) 111
BstYI RGATCY 1 cut(s) 111
BsuRI GGCC 2 cut(s) 24, 278
BtsCI GGATG 1 cut(s) 411
BtsIMutI CAGTG 1 cut(s) 406
Cac8I GCNNGC 2 cut(s) 35, 64
Csp6I GTAC 1 cut(s) 386
CviAII CATG 3 cut(s) 203, 345, 392
CviJI RGCY 4 cut(s) 24, 72, 278, 320
CviKI_1 RGCY 4 cut(s) 24, 72, 278, 320
CviQI GTAC 1 cut(s) 386
DdeI CTNAG 1 cut(s) 53
DpnI GATC 5 cut(s) 113, 164, 217, 398, 471
DpnII GATC 5 cut(s) 111, 162, 215, 396, 469
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
Eco130I CCWWGG 1 cut(s) 229
Eco32I GATATC 1 cut(s) 45
EcoNI CCTNNNNNAGG 1 cut(s) 504
EcoRI GAATTC 1 cut(s) 89
EcoRV GATATC 1 cut(s) 45
EcoT14I CCWWGG 1 cut(s) 229
ErhI CCWWGG 1 cut(s) 229
FaeI CATG 3 cut(s) 206, 348, 395
FatI CATG 3 cut(s) 202, 344, 391
FauNDI CATATG 1 cut(s) 256
FbaI TGATCA 1 cut(s) 396
Fnu4HI GCNGC 1 cut(s) 128
FokI GGATG 1 cut(s) 418
Fsp4HI GCNGC 1 cut(s) 128
FspBI CTAG 1 cut(s) 440
GluI GCNGC 1 cut(s) 128
GsuI CTGGAG 1 cut(s) 115
HaeIII GGCC 2 cut(s) 24, 278
HapII CCGG 1 cut(s) 40
Hin1II CATG 3 cut(s) 206, 348, 395
HincII GTYRAC 1 cut(s) 208
HindII GTYRAC 1 cut(s) 208
HinfI GANTC 1 cut(s) 149
HpaII CCGG 1 cut(s) 40
HphI GGTGA 1 cut(s) 210
Hpy166II GTNNAC 1 cut(s) 208
Hpy188I TCNGA 1 cut(s) 167
Hpy188III TCNNGA 3 cut(s) 40, 94, 484
Hpy8I GTNNAC 1 cut(s) 208
HpyAV CCTTC 1 cut(s) 323
HpyCH4III ACNGT 1 cut(s) 268
HpyCH4V TGCA 5 cut(s) 62, 77, 108, 335, 356
HpyF10VI GCNNNNNNNGC 3 cut(s) 30, 63, 114
HpyF3I CTNAG 1 cut(s) 53
Hsp92II CATG 3 cut(s) 206, 348, 395
Kpn2I TCCGGA 1 cut(s) 39
Ksp22I TGATCA 1 cut(s) 396
Kzo9I GATC 5 cut(s) 111, 162, 215, 396, 469
LmnI GCTCC 2 cut(s) 42, 235
LpnPI CCDG 5 cut(s) 6, 43, 53, 79, 310
Lsp1109I GCAGC 1 cut(s) 114
MaeI CTAG 1 cut(s) 440
MaeIII GTNAC 1 cut(s) 358
MalI GATC 5 cut(s) 113, 164, 217, 398, 471
MboI GATC 5 cut(s) 111, 162, 215, 396, 469
MboII GAAGA 3 cut(s) 3, 182, 185
MflI RGATCY 1 cut(s) 111
MluCI AATT 3 cut(s) 89, 194, 426
MnlI CCTC 2 cut(s) 169, 331
MroI TCCGGA 1 cut(s) 39
MseI TTAA 1 cut(s) 465
MslI CAYNNNNRTG 2 cut(s) 157, 365
MspI CCGG 1 cut(s) 40
MwoI GCNNNNNNNGC 3 cut(s) 30, 63, 114
NdeI CATATG 1 cut(s) 256
NdeII GATC 5 cut(s) 111, 162, 215, 396, 469
NlaIII CATG 3 cut(s) 206, 348, 395
NmuCI GTSAC 1 cut(s) 358
NspI RCATGY 1 cut(s) 348
OliI CACNNNNGTG 1 cut(s) 365
PciI ACATGT 1 cut(s) 344
PfeI GAWTC 1 cut(s) 149
PkrI GCNGC 1 cut(s) 129
PscI ACATGT 1 cut(s) 344
PsuI RGATCY 1 cut(s) 111
RsaI GTAC 1 cut(s) 387
RsaNI GTAC 1 cut(s) 386
RseI CAYNNNNRTG 2 cut(s) 157, 365
SaqAI TTAA 1 cut(s) 465
SatI GCNGC 1 cut(s) 128
Sau3AI GATC 5 cut(s) 111, 162, 215, 396, 469
ScaI AGTACT 1 cut(s) 387
SetI ASST 6 cut(s) 180, 223, 231, 322, 334, 502
SmiMI CAYNNNNRTG 2 cut(s) 157, 365
SmlI CTYRAG 1 cut(s) 419
SmoI CTYRAG 1 cut(s) 419
Sse9I AATT 3 cut(s) 89, 194, 426
SsiI CCGC 2 cut(s) 57, 117
SspI AATATT 1 cut(s) 460
SspMI CTAG 1 cut(s) 440
StyI CCWWGG 1 cut(s) 229
TaaI ACNGT 1 cut(s) 268
TaqI TCGA 2 cut(s) 137, 453
TasI AATT 3 cut(s) 89, 194, 426
TatI WGTACW 1 cut(s) 385
TfiI GAWTC 1 cut(s) 149
Tru1I TTAA 1 cut(s) 465
Tru9I TTAA 1 cut(s) 465
TscAI CASTG 1 cut(s) 406
TseFI GTSAC 1 cut(s) 358
TseI GCWGC 1 cut(s) 127
Tsp45I GTSAC 1 cut(s) 358
TspDTI ATGAA 5 cut(s) 141, 187, 191, 380, 419
TspRI CASTG 1 cut(s) 406
XagI CCTNNNNNAGG 1 cut(s) 504
XapI RAATTY 3 cut(s) 89, 194, 426
XceI RCATGY 1 cut(s) 348
XspI CTAG 1 cut(s) 440
ZrmI AGTACT 1 cut(s) 387
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.