RchiOBHm_Chr1g0325151

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000132
Physical Location & Seq
Forward (+)
13078985 .. 13081735
2751 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55490

Sequence Viewer

Length: 1548 bp
ATGGAGCTTCAATGGCCCCCTTCCTTCCAAGTCCTGTTTACCTTCTTGCTCTTCATTATTATGGTAGTGAACATAGCGACGAGGAACACAGCCAAGTACTCAGCTTCAAAAAATCTACCCCCTGGGCCATGGAAGCTACCCGTTATAGGAAATCTACACCAGCTCGTTGGCTCTCTACCCCATCATGTTCTAAGAGACTTGGCCAACAAATACGGACCCCTTATGCACCTCAAGCTTGGAGAAGTTTCCACCATAGTTGTTTCATCACCAGAGATTGCTAAAGAGGTGATGAAAACCCACGATGTTGTCTTTGCATCAAGGCCGCAGATCGTTGCTACAGCTATTATGACTTACGGTTGTACAAGCGTTTCGTTTGCACCATATGGTGATTACTGGAGACAGCTAAGAAAGATTTACGCACATGAGCTTTTGAGCAAAATGCGTGTTCAAAGCTACCGATCTGTAAGAGAAGATGAGGTACTGAATCTCATCAAACGGATTTCTTTAAAAACAGGATCAACAGTCAATCTTACCAGTGAAATTTACTCATCAACATATAGCATCTCGTACCGAGCAGCCTTTGGTAAAAGAAGCAAAGATCTTGAAAACTTCATACACTGTGTGAAGGAATCTATGAAGCTGGCGAGCGGCTTTAATTTAGCAGATGTTTTTCCTTCAGTCAAATTGCTTCATCTGCTAAGTGGGATGAAGCCCAAACTCGAGAGGCTGCATAAAGAAGCTGACAGGATAATGGAGAACATCATTAATGAGCACAAGGAAGATAAGACATCAACAAAAGTTCTCGAAGGTGAAGCAGAGGAAGATCTTCTAGATGTTCTCCTAAAGTTTCATGAACATGGCGGTGGGCTTGAGTTTTCCCTAACCACTGAAAACATCAAAGCAATAATCATAGAGATATTTGGTGGTGGGGGTGAGACATCATCTACAACTGTTGATTGGGCAATGTCAGAAATGATTAAAAATCCGAGAATAATGAAAATGGCGCAGAATGAAGTGAGGGAAGTGTTTAATAGAAAAGGGATCGCAGATGAAACAGGCATTGGGGAGATGAAATATTTGGACTTAGTTATCAAAGAGACACTAAGGTTACACCCTTCTAATCCCTTGTTACTTCCAAGAGAATGCAGTGAGAGGTGTGAGATTGATGGATATGAAATACCTGTCAAAACCAAGGTAGTTATCAATGCATGGGCAATTGCTACAGATCCAAGTTACTGGACTAAGCCTGAGAGCTTTACTCCAGAGAGATTTCTTGACAGCTCTATTGACTACAGGGGATTAAACTTTGAGTATATCCCATTTGGTGCTGGAAGGAGAATTTGCCCTGGCATATCATTTGGTCTGGCCAACGTCAAGCTCCAACTTGCAATGTTGTTGTACCATTTTGATTGGAAACTCCCCAAAGGAATGAAGCACGATGACCTGGACATGACTGAGGCCTTCGGTGTCACCTCCAGCAGGAAACAGGATCTACACTTGATTCCCATTCCGTATCATCATCCACCTACTGAAAAAGCCCAAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00140 ko01100 ko04913 ko04917 ko04927 ko04934 map00140 map01100 map04913 map04917 map04927 map04934
Pfam Domains
Protein Families
p450

Protein Analysis

515

Amino Acids

58.38

Weight (kDa)

7.71

Isoelectric Point (pI)

36.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 40 - 493 8.7e-104 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 648
AciI CCGC 3 cut(s) 323, 648, 861
AclWI GGATC 4 cut(s) 523, 1049, 1220, 1497
AcoI YGGCCR 2 cut(s) 201, 1365
AcsI RAATTY 2 cut(s) 540, 1338
AcuI CTGAAG 1 cut(s) 660
AdeI CACNNNGTG 1 cut(s) 622
AfaI GTAC 5 cut(s) 98, 361, 480, 569, 1400
AfiI CCNNNNNNNGG 2 cut(s) 146, 1479
AgsI TTSAA 4 cut(s) 11, 108, 449, 605
AjnI CCWGG 3 cut(s) 121, 1345, 1443
AjuI GAANNNNNNNTTGG 2 cut(s) 1044, 1076
Alw21I GWGCWC 1 cut(s) 774
Alw26I GTCTC 4 cut(s) 189, 391, 929, 1091
AlwI GGATC 4 cut(s) 523, 1049, 1220, 1497
Ama87I CYCGRG 1 cut(s) 719
AoxI GGCC 6 cut(s) 14, 125, 201, 320, 1365, 1458
ApeKI GCWGC 2 cut(s) 575, 727
ApoI RAATTY 2 cut(s) 540, 1338
AseI ATTAAT 1 cut(s) 765
Asp700I GAANNNNTTC 1 cut(s) 825
AspLEI GCGC 1 cut(s) 1006
AspS9I GGNCC 3 cut(s) 15, 125, 215
AsuHPI GGTGA 6 cut(s) 258, 298, 398, 821, 944, 1462
AvaI CYCGRG 1 cut(s) 719
AvaII GGWCC 1 cut(s) 215
BalI TGGCCA 2 cut(s) 203, 1367
BarI GAAGNNNNNNTAC 2 cut(s) 462, 494
Bbv12I GWGCWC 1 cut(s) 774
BbvI GCAGC 2 cut(s) 587, 714
BccI CCATC 2 cut(s) 189, 1160
BciT130I CCWGG 3 cut(s) 123, 1347, 1445
BcoDI GTCTC 4 cut(s) 189, 391, 929, 1091
BfaI CTAG 1 cut(s) 830
BfmI CTRYAG 3 cut(s) 336, 1221, 1291
BglII AGATCT 2 cut(s) 598, 823
BisI GCNGC 4 cut(s) 323, 576, 649, 728
BlsI GCNGC 4 cut(s) 324, 577, 650, 729
BmcAI AGTACT 1 cut(s) 98
Bme1390I CCNGG 3 cut(s) 123, 1347, 1445
Bme18I GGWCC 1 cut(s) 215
BmeT110I CYCGRG 1 cut(s) 719
BmgT120I GGNCC 3 cut(s) 15, 125, 215
BmiI GGNNCC 2 cut(s) 17, 217
BmrFI CCNGG 3 cut(s) 123, 1347, 1445
BmsI GCATC 2 cut(s) 323, 570
BplI GAGNNNNNCTC 2 cut(s) 1243, 1275
BpmI CTGGAG 3 cut(s) 415, 1245, 1459
BpuEI CTTGAG 2 cut(s) 215, 890
BsaJI CCNNGG 5 cut(s) 121, 122, 128, 1191, 1345
Bsc4I CCNNNNNNNGG 2 cut(s) 146, 1479
Bse1I ACTGG 3 cut(s) 398, 534, 1241
Bse3DI GCAATG 2 cut(s) 969, 1395
BseBI CCWGG 3 cut(s) 123, 1347, 1445
BseDI CCNNGG 5 cut(s) 121, 122, 128, 1191, 1345
BseGI GGATG 2 cut(s) 711, 1519
BseLI CCNNNNNNNGG 2 cut(s) 146, 1479
BseMI GCAATG 2 cut(s) 969, 1395
BseMII CTCAG 3 cut(s) 114, 1239, 1446
BseNI ACTGG 3 cut(s) 398, 534, 1241
BseXI GCAGC 2 cut(s) 587, 714
BshFI GGCC 6 cut(s) 16, 127, 203, 322, 1367, 1460
BsiHKAI GWGCWC 1 cut(s) 774
BsiHKCI CYCGRG 1 cut(s) 719
BslI CCNNNNNNNGG 2 cut(s) 146, 1479
BsmAI GTCTC 4 cut(s) 189, 391, 929, 1091
BsmI GAATGC 1 cut(s) 1148
BsnI GGCC 6 cut(s) 16, 127, 203, 322, 1367, 1460
BsoBI CYCGRG 1 cut(s) 719
Bsp1286I GDGCHC 1 cut(s) 774
Bsp1407I TGTACA 1 cut(s) 359
Bsp143I GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
Bsp19I CCATGG 1 cut(s) 128
BspACI CCGC 3 cut(s) 323, 648, 861
BspANI GGCC 6 cut(s) 16, 127, 203, 322, 1367, 1460
BspCNI CTCAG 3 cut(s) 113, 1240, 1447
BspHI TCATGA 1 cut(s) 850
BspLI GGNNCC 2 cut(s) 17, 217
BspPI GGATC 4 cut(s) 523, 1049, 1220, 1497
BspQI GCTCTTC 1 cut(s) 56
BsrBI CCGCTC 1 cut(s) 648
BsrDI GCAATG 2 cut(s) 969, 1395
BsrGI TGTACA 1 cut(s) 359
BsrI ACTGG 3 cut(s) 398, 534, 1241
BssECI CCNNGG 5 cut(s) 121, 122, 128, 1191, 1345
BssMI GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
BssT1I CCWWGG 2 cut(s) 128, 1191
Bst2UI CCWGG 3 cut(s) 123, 1347, 1445
Bst4CI ACNGT 4 cut(s) 356, 523, 620, 952
Bst6I CTCTTC 1 cut(s) 56
BstAUI TGTACA 1 cut(s) 359
BstC8I GCNNGC 2 cut(s) 642, 646
BstDEI CTNAG 9 cut(s) 100, 191, 404, 698, 1084, 1103, 1242, 1248, 1455
BstDSI CCRYGG 1 cut(s) 128
BstENI CCTNNNNNAGG 1 cut(s) 1477
BstF5I GGATG 2 cut(s) 711, 1519
BstHHI GCGC 1 cut(s) 1006
BstKTI GATC 8 cut(s) 330, 461, 518, 601, 826, 1044, 1228, 1492
BstMAI GTCTC 4 cut(s) 189, 391, 929, 1091
BstMBI GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
BstMWI GCNNNNNNNGC 4 cut(s) 13, 133, 232, 694
BstNI CCWGG 3 cut(s) 123, 1347, 1445
BstSCI CCNGG 3 cut(s) 121, 1345, 1443
BstSFI CTRYAG 3 cut(s) 336, 1221, 1291
BstV1I GCAGC 2 cut(s) 587, 714
BstX2I RGATCY 4 cut(s) 598, 823, 1225, 1489
BstXI CCANNNNNNTGG 2 cut(s) 167, 1236
BstYI RGATCY 4 cut(s) 598, 823, 1225, 1489
BsuRI GGCC 6 cut(s) 16, 127, 203, 322, 1367, 1460
BtgI CCRYGG 1 cut(s) 128
BtsCI GGATG 2 cut(s) 711, 1519
BtsI GCAGTG 1 cut(s) 1153
BtsIMutI CAGTG 4 cut(s) 541, 616, 885, 1153
Cac8I GCNNGC 2 cut(s) 642, 646
CciI TCATGA 1 cut(s) 850
CfoI GCGC 1 cut(s) 1006
Cfr13I GGNCC 3 cut(s) 15, 125, 215
Csp6I GTAC 5 cut(s) 97, 360, 479, 568, 1399
CspCI CAANNNNNGTGG 2 cut(s) 238, 273
CviAII CATG 7 cut(s) 129, 185, 422, 851, 857, 1209, 1450
CviQI GTAC 5 cut(s) 97, 360, 479, 568, 1399
DdeI CTNAG 9 cut(s) 100, 191, 404, 698, 1084, 1103, 1242, 1248, 1455
DpnI GATC 8 cut(s) 329, 460, 517, 600, 825, 1043, 1227, 1491
DpnII GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
DraI TTTAAA 1 cut(s) 507
DraIII CACNNNGTG 1 cut(s) 622
EaeI YGGCCR 2 cut(s) 201, 1365
Eam1104I CTCTTC 1 cut(s) 56
EarI CTCTTC 1 cut(s) 56
Eco130I CCWWGG 2 cut(s) 128, 1191
Eco147I AGGCCT 1 cut(s) 1460
Eco47I GGWCC 1 cut(s) 215
Eco57I CTGAAG 1 cut(s) 660
Eco88I CYCGRG 1 cut(s) 719
EcoNI CCTNNNNNAGG 1 cut(s) 1477
EcoRII CCWGG 3 cut(s) 121, 1345, 1443
EcoT14I CCWWGG 2 cut(s) 128, 1191
EcoT22I ATGCAT 1 cut(s) 1210
ErhI CCWWGG 2 cut(s) 128, 1191
FaeI CATG 7 cut(s) 132, 188, 425, 854, 860, 1212, 1453
FatI CATG 7 cut(s) 128, 184, 421, 850, 856, 1208, 1449
FauNDI CATATG 1 cut(s) 382
Fnu4HI GCNGC 4 cut(s) 323, 576, 649, 728
FokI GGATG 2 cut(s) 718, 1506
Fsp4HI GCNGC 4 cut(s) 323, 576, 649, 728
FspBI CTAG 1 cut(s) 830
GlaI GCGC 1 cut(s) 1005
GluI GCNGC 4 cut(s) 323, 576, 649, 728
GsuI CTGGAG 3 cut(s) 415, 1245, 1459
HaeIII GGCC 6 cut(s) 16, 127, 203, 322, 1367, 1460
HhaI GCGC 1 cut(s) 1006
Hin1II CATG 7 cut(s) 132, 188, 425, 854, 860, 1212, 1453
Hin6I GCGC 1 cut(s) 1004
HinP1I GCGC 1 cut(s) 1004
HindIII AAGCTT 1 cut(s) 233
HinfI GANTC 3 cut(s) 484, 629, 1501
HphI GGTGA 6 cut(s) 258, 298, 398, 821, 944, 1462
Hpy166II GTNNAC 2 cut(s) 39, 70
Hpy188I TCNGA 2 cut(s) 970, 987
Hpy188III TCNNGA 7 cut(s) 602, 721, 803, 830, 851, 1262, 1274
Hpy8I GTNNAC 2 cut(s) 39, 70
Hpy99I CGWCG 1 cut(s) 82
HpyAV CCTTC 9 cut(s) 30, 34, 52, 619, 684, 800, 1125, 1326, 1471
HpyCH4III ACNGT 4 cut(s) 356, 523, 620, 952
HpyCH4IV ACGT 1 cut(s) 1371
HpyCH4V TGCA 7 cut(s) 226, 314, 377, 730, 1146, 1208, 1388
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 133, 232, 694
HpyF3I CTNAG 9 cut(s) 100, 191, 404, 698, 1084, 1103, 1242, 1248, 1455
HpySE526I ACGT 1 cut(s) 1371
Hsp92II CATG 7 cut(s) 132, 188, 425, 854, 860, 1212, 1453
HspAI GCGC 1 cut(s) 1004
Kzo9I GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
LguI GCTCTTC 1 cut(s) 56
LmnI GCTCC 2 cut(s) 4, 1383
Lsp1109I GCAGC 2 cut(s) 587, 714
LweI GCATC 2 cut(s) 323, 570
MaeI CTAG 1 cut(s) 830
MaeII ACGT 1 cut(s) 1371
MaeIII GTNAC 4 cut(s) 1107, 1128, 1232, 1468
MalI GATC 8 cut(s) 329, 460, 517, 600, 825, 1043, 1227, 1491
MbiI CCGCTC 1 cut(s) 648
MboI GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
MboII GAAGA 5 cut(s) 43, 482, 791, 818, 833
MfeI CAATTG 1 cut(s) 1215
MflI RGATCY 4 cut(s) 598, 823, 1225, 1489
MhlI GDGCHC 1 cut(s) 774
MlsI TGGCCA 2 cut(s) 203, 1367
MluCI AATT 5 cut(s) 540, 655, 683, 1215, 1338
MluNI TGGCCA 2 cut(s) 203, 1367
MmeI TCCRAC 1 cut(s) 1405
Mox20I TGGCCA 2 cut(s) 203, 1367
Mph1103I ATGCAT 1 cut(s) 1210
MroXI GAANNNNTTC 1 cut(s) 825
MscI TGGCCA 2 cut(s) 203, 1367
MseI TTAA 6 cut(s) 506, 654, 765, 978, 1029, 1301
MslI CAYNNNNRTG 3 cut(s) 59, 855, 861
Msp20I TGGCCA 2 cut(s) 203, 1367
MspR9I CCNGG 3 cut(s) 123, 1347, 1445
MunI CAATTG 1 cut(s) 1215
Mva1269I GAATGC 1 cut(s) 1148
MvaI CCWGG 3 cut(s) 123, 1347, 1445
MwoI GCNNNNNNNGC 4 cut(s) 13, 133, 232, 694
NcoI CCATGG 1 cut(s) 128
NdeI CATATG 1 cut(s) 382
NdeII GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
NlaIII CATG 7 cut(s) 132, 188, 425, 854, 860, 1212, 1453
NlaIV GGNNCC 2 cut(s) 17, 217
NmuCI GTSAC 1 cut(s) 1468
NsiI ATGCAT 1 cut(s) 1210
PaeR7I CTCGAG 1 cut(s) 719
PagI TCATGA 1 cut(s) 850
PasI CCCWGGG 1 cut(s) 122
PceI AGGCCT 1 cut(s) 1460
PciSI GCTCTTC 1 cut(s) 56
PctI GAATGC 1 cut(s) 1148
PdmI GAANNNNTTC 1 cut(s) 825
PfeI GAWTC 3 cut(s) 484, 629, 1501
PkrI GCNGC 4 cut(s) 324, 577, 650, 729
PshBI ATTAAT 1 cut(s) 765
Psp6I CCWGG 3 cut(s) 121, 1345, 1443
PspGI CCWGG 3 cut(s) 121, 1345, 1443
PspN4I GGNNCC 2 cut(s) 17, 217
PspPI GGNCC 3 cut(s) 15, 125, 215
PsuI RGATCY 4 cut(s) 598, 823, 1225, 1489
RsaI GTAC 5 cut(s) 98, 361, 480, 569, 1400
RsaNI GTAC 5 cut(s) 97, 360, 479, 568, 1399
RseI CAYNNNNRTG 3 cut(s) 59, 855, 861
SapI GCTCTTC 1 cut(s) 56
SaqAI TTAA 6 cut(s) 506, 654, 765, 978, 1029, 1301
SatI GCNGC 4 cut(s) 323, 576, 649, 728
Sau3AI GATC 8 cut(s) 327, 458, 515, 598, 823, 1041, 1225, 1489
Sau96I GGNCC 3 cut(s) 15, 125, 215
ScaI AGTACT 1 cut(s) 98
ScrFI CCNGG 3 cut(s) 123, 1347, 1445
SduI GDGCHC 1 cut(s) 774
SfaNI GCATC 2 cut(s) 323, 570
SfcI CTRYAG 3 cut(s) 336, 1221, 1291
Sfr274I CTCGAG 1 cut(s) 719
SinI GGWCC 1 cut(s) 215
SlaI CTCGAG 1 cut(s) 719
SmiMI CAYNNNNRTG 3 cut(s) 59, 855, 861
SmlI CTYRAG 3 cut(s) 230, 719, 869
SmoI CTYRAG 3 cut(s) 230, 719, 869
Sse9I AATT 5 cut(s) 540, 655, 683, 1215, 1338
SseBI AGGCCT 1 cut(s) 1460
SsiI CCGC 3 cut(s) 323, 648, 861
SspI AATATT 1 cut(s) 1076
SspMI CTAG 1 cut(s) 830
StuI AGGCCT 1 cut(s) 1460
StyD4I CCNGG 3 cut(s) 121, 1345, 1443
StyI CCWWGG 2 cut(s) 128, 1191
TaaI ACNGT 4 cut(s) 356, 523, 620, 952
TaiI ACGT 1 cut(s) 1374
TaqI TCGA 2 cut(s) 720, 804
TasI AATT 5 cut(s) 540, 655, 683, 1215, 1338
TatI WGTACW 2 cut(s) 96, 359
TauI GCSGC 2 cut(s) 325, 651
TfiI GAWTC 3 cut(s) 484, 629, 1501
Tru1I TTAA 6 cut(s) 506, 654, 765, 978, 1029, 1301
Tru9I TTAA 6 cut(s) 506, 654, 765, 978, 1029, 1301
TscAI CASTG 4 cut(s) 541, 623, 892, 1153
TseFI GTSAC 1 cut(s) 1468
TseI GCWGC 2 cut(s) 575, 727
Tsp45I GTSAC 1 cut(s) 1468
TspGWI ACGGA 3 cut(s) 228, 511, 1500
TspRI CASTG 4 cut(s) 541, 623, 892, 1153
VpaK11BI GGWCC 1 cut(s) 215
VspI ATTAAT 1 cut(s) 765
XagI CCTNNNNNAGG 1 cut(s) 1477
XapI RAATTY 2 cut(s) 540, 1338
XbaI TCTAGA 1 cut(s) 829
XhoI CTCGAG 1 cut(s) 719
XmnI GAANNNNTTC 1 cut(s) 825
XspI CTAG 1 cut(s) 830
ZrmI AGTACT 1 cut(s) 98
Zsp2I ATGCAT 1 cut(s) 1210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.