pycom03g14010

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
15266679 .. 15267641
963 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g14010.1

Sequence Viewer

Length: 783 bp
ATGGAAAACATCATCAACGAACATCAGAAAGATCTTGAAACTACAAAAAATGTTGAGGGCGAGTCAGTGGAAGATCTTGTACATGTTCTCCTAAAATTTCACGAACATGGTGGTGCGCTTGAATTTTCACTTACTACTAACAACATCAAAGCAGTAATCTTTGATGTTTTCTCGGCTGGGAGTGAGACATCAGCTACAACTGTAGATTGGGCAATTTCAGAAATGATGAAAAATCCAAGAGTAAGGAAAAAGGCACAGCGTGAGGTGAGGGAAGTGTTTAATAGAAAAGGGAAGGCAGATGAAACAAGCATCAGAGAGATGAAGTATTTAAACGCAGTAATTAAAGAGACGCTGAGATTACACCCTTCTGTTCCCCTATTACTTCCAAGAGAATGGGGAGAGAAGTGCGACATTGGTGGATATGGAATACCTGTGAAATCCAAGGTAATCGTCAATGCGTGGGCTATCGGTAGAGATCCCAAGTACTGGACTGAGCCTGAGAGGTTTAAACCAGAGAGGTTCCTTGACAGCTCCATTGACTACAAGGGAACAAACTTCGAATACATCCCGTTTGGTGCAGGAAGGAGAATATGTCCGGGCATATTATATGGTCTGGCAAACGTTGAGCTCCCGCTTGCATTGTTGCTATACCATTTCGATTGGAAACTTCCCGATGGAACGAAGCACGAAGACTTGGACATGACCGAGACCTTTGGCATCGCGGTCCGAAGAAAACAAGACCTGCACTTAATCCCGATTCCGTATCATCCTCCGCCTAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

261

Amino Acids

29.77

Weight (kDa)

6.33

Isoelectric Point (pI)

24.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 1 - 246 1.9e-69 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 750
AccB7I CCANNNNNTGG 1 cut(s) 486
AccII CGCG 1 cut(s) 722
AciI CCGC 3 cut(s) 632, 722, 773
AclI AACGTT 1 cut(s) 621
AclWI GGATC 1 cut(s) 470
AcsI RAATTY 2 cut(s) 95, 122
AdeI CACNNNGTG 1 cut(s) 260
AfaI GTAC 2 cut(s) 81, 485
AfiI CCNNNNNNNGG 1 cut(s) 486
AflIII ACRYGT 1 cut(s) 82
AgsI TTSAA 2 cut(s) 38, 122
AluBI AGCT 3 cut(s) 194, 531, 628
AluI AGCT 3 cut(s) 194, 531, 628
Alw21I GWGCWC 1 cut(s) 630
Alw26I GTCTC 3 cut(s) 179, 341, 701
AlwI GGATC 1 cut(s) 470
ApoI RAATTY 2 cut(s) 95, 122
AspLEI GCGC 1 cut(s) 118
AspS9I GGNCC 1 cut(s) 724
AsuC2I CCSGG 1 cut(s) 597
AsuHPI GGTGA 1 cut(s) 277
AsuII TTCGAA 1 cut(s) 558
AvaII GGWCC 1 cut(s) 724
BanII GRGCYC 1 cut(s) 630
BarI GAAGNNNNNNTAC 2 cut(s) 63, 95
BbsI GAAGAC 1 cut(s) 696
Bbv12I GWGCWC 1 cut(s) 630
BccI CCATC 1 cut(s) 668
BcnI CCSGG 1 cut(s) 597
BcoDI GTCTC 3 cut(s) 179, 341, 701
BfmI CTRYAG 1 cut(s) 201
BfuAI ACCTGC 1 cut(s) 750
BglII AGATCT 2 cut(s) 31, 73
BmcAI AGTACT 1 cut(s) 485
Bme1390I CCNGG 1 cut(s) 597
Bme18I GGWCC 1 cut(s) 724
BmgT120I GGNCC 1 cut(s) 724
BmiI GGNNCC 1 cut(s) 521
BmrFI CCNGG 1 cut(s) 597
BmsI GCATC 2 cut(s) 318, 726
BpiI GAAGAC 1 cut(s) 696
Bpu14I TTCGAA 1 cut(s) 558
BpuMI CCSGG 1 cut(s) 597
BsaI GGTCTC 1 cut(s) 701
BsaJI CCNNGG 1 cut(s) 441
BsaXI ACNNNNNCTCC 4 cut(s) 72, 102, 577, 607
Bsc4I CCNNNNNNNGG 1 cut(s) 486
Bse1I ACTGG 1 cut(s) 491
BseDI CCNNGG 1 cut(s) 441
BseGI GGATG 2 cut(s) 564, 766
BseLI CCNNNNNNNGG 1 cut(s) 486
BseMII CTCAG 3 cut(s) 344, 483, 489
BseNI ACTGG 1 cut(s) 491
BseYI CCCAGC 1 cut(s) 176
BsgI GTGCAG 2 cut(s) 597, 728
Bsh1236I CGCG 1 cut(s) 722
BsiHKAI GWGCWC 1 cut(s) 630
BsiSI CCGG 1 cut(s) 596
BslI CCNNNNNNNGG 1 cut(s) 486
BsmAI GTCTC 3 cut(s) 179, 341, 701
BsmBI CGTCTC 1 cut(s) 341
Bso31I GGTCTC 1 cut(s) 701
Bsp119I TTCGAA 1 cut(s) 558
Bsp1286I GDGCHC 1 cut(s) 630
Bsp1407I TGTACA 1 cut(s) 79
Bsp143I GATC 3 cut(s) 31, 73, 475
BspACI CCGC 3 cut(s) 632, 722, 773
BspCNI CTCAG 3 cut(s) 345, 484, 490
BspFNI CGCG 1 cut(s) 722
BspLI GGNNCC 1 cut(s) 521
BspMI ACCTGC 1 cut(s) 750
BspPI GGATC 1 cut(s) 470
BspT104I TTCGAA 1 cut(s) 558
BspTNI GGTCTC 1 cut(s) 701
BsrGI TGTACA 1 cut(s) 79
BsrI ACTGG 1 cut(s) 491
BssECI CCNNGG 1 cut(s) 441
BssMI GATC 3 cut(s) 31, 73, 475
BssT1I CCWWGG 1 cut(s) 441
Bst4CI ACNGT 1 cut(s) 202
BstAUI TGTACA 1 cut(s) 79
BstBI TTCGAA 1 cut(s) 558
BstC8I GCNNGC 1 cut(s) 636
BstDEI CTNAG 3 cut(s) 353, 492, 498
BstF5I GGATG 2 cut(s) 564, 766
BstFNI CGCG 1 cut(s) 722
BstHHI GCGC 1 cut(s) 118
BstKTI GATC 3 cut(s) 34, 76, 478
BstMAI GTCTC 3 cut(s) 179, 341, 701
BstMBI GATC 3 cut(s) 31, 73, 475
BstNSI RCATGY 1 cut(s) 86
BstSCI CCNGG 1 cut(s) 595
BstSFI CTRYAG 1 cut(s) 201
BstUI CGCG 1 cut(s) 722
BstV2I GAAGAC 1 cut(s) 696
BstX2I RGATCY 3 cut(s) 31, 73, 475
BstXI CCANNNNNNTGG 1 cut(s) 393
BstYI RGATCY 3 cut(s) 31, 73, 475
BtgZI GCGATG 1 cut(s) 703
BtsCI GGATG 2 cut(s) 564, 766
BtsIMutI CAGTG 1 cut(s) 72
BveI ACCTGC 1 cut(s) 750
Cac8I GCNNGC 1 cut(s) 636
CfoI GCGC 1 cut(s) 118
Cfr13I GGNCC 1 cut(s) 724
CpoI CGGWCCG 1 cut(s) 724
CseI GACGC 1 cut(s) 358
Csp6I GTAC 2 cut(s) 80, 484
CspI CGGWCCG 1 cut(s) 724
CviAII CATG 3 cut(s) 83, 107, 700
CviJI RGCY 6 cut(s) 176, 194, 464, 496, 531, 628
CviKI_1 RGCY 6 cut(s) 176, 194, 464, 496, 531, 628
CviQI GTAC 2 cut(s) 80, 484
DdeI CTNAG 3 cut(s) 353, 492, 498
DpnI GATC 3 cut(s) 33, 75, 477
DpnII GATC 3 cut(s) 31, 73, 475
DraI TTTAAA 2 cut(s) 330, 508
DraIII CACNNNGTG 1 cut(s) 260
EciI GGCGGA 1 cut(s) 762
Ecl136II GAGCTC 1 cut(s) 628
Eco130I CCWWGG 1 cut(s) 441
Eco24I GRGCYC 1 cut(s) 630
Eco31I GGTCTC 1 cut(s) 701
Eco47I GGWCC 1 cut(s) 724
Eco53kI GAGCTC 1 cut(s) 628
EcoICRI GAGCTC 1 cut(s) 628
EcoT14I CCWWGG 1 cut(s) 441
EcoT38I GRGCYC 1 cut(s) 630
ErhI CCWWGG 1 cut(s) 441
Esp3I CGTCTC 1 cut(s) 341
FaeI CATG 3 cut(s) 86, 110, 703
FaiI YATR 9 cut(s) 84, 108, 423, 592, 602, 607, 609, 649, 701
FatI CATG 3 cut(s) 82, 106, 699
FauI CCCGC 1 cut(s) 639
FokI GGATG 2 cut(s) 551, 753
FriOI GRGCYC 1 cut(s) 630
GlaI GCGC 1 cut(s) 117
GsaI CCCAGC 1 cut(s) 180
HapII CCGG 1 cut(s) 596
HgaI GACGC 1 cut(s) 358
HhaI GCGC 1 cut(s) 118
Hin1II CATG 3 cut(s) 86, 110, 703
Hin6I GCGC 1 cut(s) 116
HinP1I GCGC 1 cut(s) 116
HinfI GANTC 2 cut(s) 62, 757
HpaII CCGG 1 cut(s) 596
HphI GGTGA 1 cut(s) 277
Hpy188I TCNGA 4 cut(s) 27, 220, 314, 728
Hpy188III TCNNGA 4 cut(s) 35, 101, 671, 754
HpyAV CCTTC 3 cut(s) 286, 375, 576
HpyCH4III ACNGT 1 cut(s) 202
HpyCH4IV ACGT 1 cut(s) 621
HpyCH4V TGCA 3 cut(s) 578, 638, 745
HpyF3I CTNAG 3 cut(s) 353, 492, 498
HpySE526I ACGT 1 cut(s) 621
Hsp92II CATG 3 cut(s) 86, 110, 703
HspAI GCGC 1 cut(s) 116
Kzo9I GATC 3 cut(s) 31, 73, 475
LmnI GCTCC 2 cut(s) 536, 633
LpnPI CCDG 9 cut(s) 162, 444, 472, 510, 525, 564, 599, 609, 755
LweI GCATC 2 cut(s) 318, 726
MaeII ACGT 1 cut(s) 621
MalI GATC 3 cut(s) 33, 75, 477
MboI GATC 3 cut(s) 31, 73, 475
MboII GAAGA 3 cut(s) 83, 701, 741
MflI RGATCY 3 cut(s) 31, 73, 475
MhlI GDGCHC 1 cut(s) 630
MluCI AATT 5 cut(s) 95, 122, 213, 339, 778
MlyI GAGTC 1 cut(s) 71
MnlI CCTC 6 cut(s) 49, 256, 261, 495, 510, 780
MseI TTAA 5 cut(s) 279, 329, 342, 507, 749
MslI CAYNNNNRTG 2 cut(s) 105, 111
MspI CCGG 1 cut(s) 596
MspR9I CCNGG 1 cut(s) 597
MssI GTTTAAAC 1 cut(s) 508
MvnI CGCG 1 cut(s) 722
NciI CCSGG 1 cut(s) 597
NdeII GATC 3 cut(s) 31, 73, 475
NlaIII CATG 3 cut(s) 86, 110, 703
NlaIV GGNNCC 1 cut(s) 521
NmeAIII GCCGAG 1 cut(s) 152
NspI RCATGY 1 cut(s) 86
NspV TTCGAA 1 cut(s) 558
PciI ACATGT 1 cut(s) 82
PfeI GAWTC 1 cut(s) 757
PflMI CCANNNNNTGG 1 cut(s) 486
PleI GAGTC 1 cut(s) 70
PmeI GTTTAAAC 1 cut(s) 508
PpsI GAGTC 1 cut(s) 70
PscI ACATGT 1 cut(s) 82
Psp124BI GAGCTC 1 cut(s) 630
Psp1406I AACGTT 1 cut(s) 621
PspFI CCCAGC 1 cut(s) 176
PspN4I GGNNCC 1 cut(s) 521
PspPI GGNCC 1 cut(s) 724
PsuI RGATCY 3 cut(s) 31, 73, 475
RsaI GTAC 2 cut(s) 81, 485
RsaNI GTAC 2 cut(s) 80, 484
RseI CAYNNNNRTG 2 cut(s) 105, 111
Rsr2I CGGWCCG 1 cut(s) 724
RsrII CGGWCCG 1 cut(s) 724
SacI GAGCTC 1 cut(s) 630
SaqAI TTAA 5 cut(s) 279, 329, 342, 507, 749
Sau3AI GATC 3 cut(s) 31, 73, 475
Sau96I GGNCC 1 cut(s) 724
ScaI AGTACT 1 cut(s) 485
SchI GAGTC 1 cut(s) 71
ScrFI CCNGG 1 cut(s) 597
SduI GDGCHC 1 cut(s) 630
SfaNI GCATC 2 cut(s) 318, 726
SfcI CTRYAG 1 cut(s) 201
SfuI TTCGAA 1 cut(s) 558
SinI GGWCC 1 cut(s) 724
SmiMI CAYNNNNRTG 2 cut(s) 105, 111
Sse9I AATT 5 cut(s) 95, 122, 213, 339, 778
SsiI CCGC 3 cut(s) 632, 722, 773
SstI GAGCTC 1 cut(s) 630
StyD4I CCNGG 1 cut(s) 595
StyI CCWWGG 1 cut(s) 441
TaaI ACNGT 1 cut(s) 202
TaiI ACGT 1 cut(s) 624
TaqI TCGA 2 cut(s) 558, 657
TaqII GACCGA 1 cut(s) 719
TasI AATT 5 cut(s) 95, 122, 213, 339, 778
TatI WGTACW 2 cut(s) 79, 483
TfiI GAWTC 1 cut(s) 757
Tru1I TTAA 5 cut(s) 279, 329, 342, 507, 749
Tru9I TTAA 5 cut(s) 279, 329, 342, 507, 749
TscAI CASTG 1 cut(s) 72
TspDTI ATGAA 3 cut(s) 242, 315, 335
TspGWI ACGGA 1 cut(s) 750
TspRI CASTG 1 cut(s) 72
Van91I CCANNNNNTGG 1 cut(s) 486
VpaK11BI GGWCC 1 cut(s) 724
XapI RAATTY 2 cut(s) 95, 122
XceI RCATGY 1 cut(s) 86
ZrmI AGTACT 1 cut(s) 485
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.