RchiOBHm_Chr6g0296341

Cytochrome p450

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0000132
Physical Location & Seq
Reverse (-)
58063948 .. 58065944
1997 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26600

Sequence Viewer

Length: 1614 bp
ATGTGGTCCTTAATGCTCCAAACACTACCCATCAAAGCTCTTCCTCTTTCAGCTTATCTCCTCCTCTTAATCCTAGTGGTTCACTTTTGGAAGAGTTCCAAATTAGGCAAAAGCCAAGTCCTCAAGTCACCCCCAGGGCCATGGAAGCTGCCTATTCTAGGAAATTTGCTTCAGTTGGCTGGTCATCCACTGCCACACTACCCATTGAGAGACCTAGCCAAGAAATATGGACCCATTATGCACCTGAAACTAGGTCAGTCGGAGGCTATTATAATTTCATCCCGCAAAGCAGCCCTAGAGGTGTTGAAGACGCATGAGATCACTTTTGCTCAGAGGCCTCTGGTTTTGCAAGTCGAAACCATCAACTTCGGCCGAGGAAGCATTGCCTTTGCTCCTTATGGAGATTTCTGGAGAGAGGTGCGCAAGATTTGTGTTTCCGAATTATTAAGCGTTAAGCATGTGCAGGCATTTCGGTCCATAAGAGAAGAAGAGGTAAAGAACTTTGTTGAATCCATTTCCTCCTCATCATCAAAATCATCAGCCATAAATTTCAGCGAGGAGAGCTTGCTCTTGACCAACGGCATAATATCGAGGGCAGCATTTGGAAACAAGTGCAAATATCAAAAGGAGTTCCTAGCAGTGCTCGATGAAGCACTGAAACTCGGTGGAGGGTTTGACATACCTGATTTGTTTCCTTCACTTCGGTTTCTTTGTTTCATTACTGGGACCATACCCGCGATGAGAAAGATGCGAGACAAGATTGGAGTAGCACTTGACAGTATCATCGATGATCATAAGAGGAAAAGATCATTGAAGGATGATAAACCAGCAGGAGCTGATCATGATGATGAAGAGGAGGAAGATCTAGTCGACGTACTTCTAAAACTCCAGGAGTCAAGTAATGATTTCAAGTTGACAACTGGTCAAATCAAAGATGTCGTTATGGAAATCTTCGTGGCGGGGAGTGAGACATCAGCTACAACCCTAGAATGGGCGATGTCGGAGTTGCTGAGAAACCCAAGAGTAATGAAGAAGGCCCAATCTGAGGTGCGACAATCAGTACTCCTTACAAGTGAACGAAAGAAATCAACAATAGAAGATACGACGTCTGACAATGTTCATCACAAATTGGATTACTTGAGATCAATTGTGAAAGAAACCCTGCGGTTGCACCCTCCTACTCCCTTGCTTTCAAGAGAATCAAGGGAAAGATGCGAAGTCGATGGATATGAATTACCTGCTAAGACGAAAGCAATCATCAATGTATGGGCACTGGCAAGAGATCCAGAACAATGGGGGGATGATGCTGATTCCTTTAAGCCAGAGAGGTTCCTCCATGACTCTATGACTGCCAAAATCGACTTCAGAGGGAATAACTTTGAGCTCTTACCCTTTGGGGCCGGTCGAAGAATATGTCCGGGCATGTCATTTGCCAATGCAGTGATTGAGCCAACTCTTTTCCAATTGCTCTACCGCTTTGATTGGGAACTGGCTGATGGGATAAAACCAGATGAACTAGACATGACTGAGAGTTGGGGAGCAACATGCAGGAAAAGGGATGATTTGTACGTCATTGCCACCCCTCATTTCCTTGATTCAATGACCAAGTCCTAG

Protein Analysis

537

Amino Acids

60.68

Weight (kDa)

6.91

Isoelectric Point (pI)

41.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 44 - 507 3e-89 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 272
AatII GACGTC 1 cut(s) 1109
Acc16I TGCGCA 1 cut(s) 422
Acc36I ACCTGC 1 cut(s) 1246
AccI GTMKAC 1 cut(s) 870
AccII CGCG 1 cut(s) 737
AciI CCGC 5 cut(s) 283, 735, 959, 1165, 1474
AclWI GGATC 1 cut(s) 1277
AcoI YGGCCR 1 cut(s) 370
AcsI RAATTY 2 cut(s) 163, 547
AcuI CTGAAG 2 cut(s) 155, 1348
AcyI GRCGYC 1 cut(s) 1106
AfaI GTAC 3 cut(s) 876, 1062, 1568
AfiI CCNNNNNNNGG 4 cut(s) 158, 990, 991, 1045
AgsI TTSAA 6 cut(s) 307, 509, 814, 910, 1194, 1599
AhdI GACNNNNNGTC 1 cut(s) 921
AjnI CCWGG 2 cut(s) 133, 888
AjuI GAANNNNNNNTTGG 2 cut(s) 1346, 1378
AluBI AGCT 7 cut(s) 38, 53, 148, 564, 836, 977, 1384
AluI AGCT 7 cut(s) 38, 53, 148, 564, 836, 977, 1384
Alw21I GWGCWC 2 cut(s) 645, 1386
Alw26I GTCTC 3 cut(s) 204, 747, 962
AlwI GGATC 1 cut(s) 1277
AlwNI CAGNNNCTG 1 cut(s) 836
AoxI GGCC 5 cut(s) 137, 335, 370, 1035, 1398
ApeKI GCWGC 3 cut(s) 148, 290, 596
ApoI RAATTY 2 cut(s) 163, 547
ArsI GACNNNNNNTTYG 4 cut(s) 102, 134, 1399, 1431
AspLEI GCGC 1 cut(s) 423
AspS9I GGNCC 7 cut(s) 6, 137, 230, 474, 726, 1036, 1398
AsuC2I CCSGG 1 cut(s) 1419
AsuHPI GGTGA 1 cut(s) 120
AvaII GGWCC 4 cut(s) 6, 230, 474, 726
BaeGI GKGCMC 1 cut(s) 1273
BanII GRGCYC 1 cut(s) 1386
BbsI GAAGAC 1 cut(s) 314
Bbv12I GWGCWC 2 cut(s) 645, 1386
BbvI GCAGC 3 cut(s) 135, 302, 608
BccI CCATC 4 cut(s) 38, 368, 1217, 1490
BceAI ACGGC 1 cut(s) 595
BcgI CGANNNNNNTGC 2 cut(s) 452, 486
BciT130I CCWGG 2 cut(s) 135, 890
BclI TGATCA 2 cut(s) 790, 838
BcnI CCSGG 1 cut(s) 1419
BcoDI GTCTC 3 cut(s) 204, 747, 962
BfuAI ACCTGC 1 cut(s) 1246
BglII AGATCT 1 cut(s) 862
BisI GCNGC 3 cut(s) 149, 291, 597
BlsI GCNGC 3 cut(s) 150, 292, 598
BmcAI AGTACT 1 cut(s) 1062
Bme1390I CCNGG 3 cut(s) 135, 890, 1419
Bme18I GGWCC 4 cut(s) 6, 230, 474, 726
BmeRI GACNNNNNGTC 1 cut(s) 921
BmgT120I GGNCC 7 cut(s) 6, 137, 230, 474, 726, 1036, 1398
BmiI GGNNCC 4 cut(s) 232, 727, 1331, 1399
BmrFI CCNGG 3 cut(s) 135, 890, 1419
BmrI ACTGGG 1 cut(s) 732
BmsI GCATC 3 cut(s) 738, 1202, 1294
BmuI ACTGGG 1 cut(s) 732
BpiI GAAGAC 1 cut(s) 314
BpmI CTGGAG 2 cut(s) 430, 872
BpuEI CTTGAG 2 cut(s) 107, 1159
BpuMI CCSGG 1 cut(s) 1419
Bsa29I ATCGAT 1 cut(s) 786
BsaHI GRCGYC 1 cut(s) 1106
BsaI GGTCTC 1 cut(s) 204
BsaJI CCNNGG 4 cut(s) 133, 134, 140, 373
Bsc4I CCNNNNNNNGG 4 cut(s) 158, 990, 991, 1045
Bse118I RCCGGY 1 cut(s) 1400
Bse1I ACTGG 4 cut(s) 727, 925, 1278, 1494
Bse3DI GCAATG 2 cut(s) 381, 1572
BseBI CCWGG 2 cut(s) 135, 890
BseCI ATCGAT 1 cut(s) 786
BseDI CCNNGG 4 cut(s) 133, 134, 140, 373
BseGI GGATG 5 cut(s) 184, 278, 823, 1306, 1564
BseLI CCNNNNNNNGG 4 cut(s) 158, 990, 991, 1045
BseMI GCAATG 2 cut(s) 381, 1572
BseMII CTCAG 4 cut(s) 344, 1001, 1035, 1518
BseNI ACTGG 4 cut(s) 727, 925, 1278, 1494
BseRI GAGGAG 5 cut(s) 50, 53, 511, 572, 869
BseSI GKGCMC 1 cut(s) 1273
BseX3I CGGCCG 1 cut(s) 370
BseXI GCAGC 3 cut(s) 135, 302, 608
BsgI GTGCAG 1 cut(s) 482
Bsh1236I CGCG 1 cut(s) 737
Bsh1285I CGRYCG 2 cut(s) 373, 1405
BshFI GGCC 5 cut(s) 139, 337, 372, 1037, 1400
BshVI ATCGAT 1 cut(s) 786
BsiEI CGRYCG 2 cut(s) 373, 1405
BsiHKAI GWGCWC 2 cut(s) 645, 1386
BsiSI CCGG 2 cut(s) 1401, 1418
BslFI GGGAC 1 cut(s) 739
BslI CCNNNNNNNGG 4 cut(s) 158, 990, 991, 1045
BsmAI GTCTC 3 cut(s) 204, 747, 962
BsmFI GGGAC 1 cut(s) 739
BsnI GGCC 5 cut(s) 139, 337, 372, 1037, 1400
Bso31I GGTCTC 1 cut(s) 204
Bsp1286I GDGCHC 3 cut(s) 645, 1273, 1386
Bsp143I GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
Bsp19I CCATGG 1 cut(s) 140
BspACI CCGC 5 cut(s) 283, 735, 959, 1165, 1474
BspANI GGCC 5 cut(s) 139, 337, 372, 1037, 1400
BspCNI CTCAG 4 cut(s) 343, 1002, 1036, 1519
BspDI ATCGAT 1 cut(s) 786
BspFNI CGCG 1 cut(s) 737
BspHI TCATGA 1 cut(s) 841
BspLI GGNNCC 4 cut(s) 232, 727, 1331, 1399
BspMI ACCTGC 1 cut(s) 1246
BspPI GGATC 1 cut(s) 1277
BspQI GCTCTTC 1 cut(s) 45
BspTNI GGTCTC 1 cut(s) 204
BsrDI GCAATG 2 cut(s) 381, 1572
BsrFI RCCGGY 1 cut(s) 1400
BsrI ACTGG 4 cut(s) 727, 925, 1278, 1494
BssAI RCCGGY 1 cut(s) 1400
BssECI CCNNGG 4 cut(s) 133, 134, 140, 373
BssMI GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
BssNI GRCGYC 1 cut(s) 1106
BssT1I CCWWGG 1 cut(s) 140
Bst2UI CCWGG 2 cut(s) 135, 890
Bst4CI ACNGT 1 cut(s) 779
Bst6I CTCTTC 4 cut(s) 45, 86, 483, 846
BstACI GRCGYC 1 cut(s) 1106
BstC8I GCNNGC 2 cut(s) 465, 566
BstDEI CTNAG 5 cut(s) 330, 1010, 1044, 1242, 1527
BstDSI CCRYGG 1 cut(s) 140
BstENI CCTNNNNNAGG 1 cut(s) 156
BstF5I GGATG 5 cut(s) 184, 278, 823, 1306, 1564
BstFNI CGCG 1 cut(s) 737
BstHHI GCGC 1 cut(s) 423
BstKTI GATC 7 cut(s) 321, 793, 809, 841, 865, 1145, 1285
BstMAI GTCTC 3 cut(s) 204, 747, 962
BstMBI GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
BstMCI CGRYCG 2 cut(s) 373, 1405
BstMWI GCNNNNNNNGC 3 cut(s) 145, 378, 561
BstNI CCWGG 2 cut(s) 135, 890
BstNSI RCATGY 3 cut(s) 461, 1426, 1548
BstSCI CCNGG 3 cut(s) 133, 888, 1417
BstSLI GKGCMC 1 cut(s) 1273
BstUI CGCG 1 cut(s) 737
BstV1I GCAGC 3 cut(s) 135, 302, 608
BstV2I GAAGAC 1 cut(s) 314
BstX2I RGATCY 2 cut(s) 862, 1282
BstXI CCANNNNNNTGG 2 cut(s) 141, 1293
BstYI RGATCY 2 cut(s) 862, 1282
BstZI CGGCCG 1 cut(s) 370
Bsu15I ATCGAT 1 cut(s) 786
BsuRI GGCC 5 cut(s) 139, 337, 372, 1037, 1400
BsuTUI ATCGAT 1 cut(s) 786
BtgI CCRYGG 1 cut(s) 140
BtgZI GCGATG 2 cut(s) 752, 1010
BtsCI GGATG 5 cut(s) 184, 278, 823, 1306, 1564
BtsI GCAGTG 3 cut(s) 188, 645, 1446
BtsIMutI CAGTG 5 cut(s) 188, 645, 653, 1271, 1446
BveI ACCTGC 1 cut(s) 1246
Cac8I GCNNGC 2 cut(s) 465, 566
CaiI CAGNNNCTG 1 cut(s) 836
CciI TCATGA 1 cut(s) 841
CfoI GCGC 1 cut(s) 423
Cfr10I RCCGGY 1 cut(s) 1400
Cfr13I GGNCC 7 cut(s) 6, 137, 230, 474, 726, 1036, 1398
ClaI ATCGAT 1 cut(s) 786
CseI GACGC 1 cut(s) 319
Csp6I GTAC 3 cut(s) 875, 1061, 1567
CviAII CATG 8 cut(s) 141, 314, 458, 842, 1337, 1423, 1522, 1545
CviQI GTAC 3 cut(s) 875, 1061, 1567
DdeI CTNAG 5 cut(s) 330, 1010, 1044, 1242, 1527
DpnI GATC 7 cut(s) 320, 792, 808, 840, 864, 1144, 1284
DpnII GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
DriI GACNNNNNGTC 1 cut(s) 921
EaeI YGGCCR 1 cut(s) 370
EagI CGGCCG 1 cut(s) 370
Eam1104I CTCTTC 4 cut(s) 45, 86, 483, 846
Eam1105I GACNNNNNGTC 1 cut(s) 921
EarI CTCTTC 4 cut(s) 45, 86, 483, 846
Ecl136II GAGCTC 1 cut(s) 1384
EclXI CGGCCG 1 cut(s) 370
Eco130I CCWWGG 1 cut(s) 140
Eco147I AGGCCT 1 cut(s) 337
Eco24I GRGCYC 1 cut(s) 1386
Eco31I GGTCTC 1 cut(s) 204
Eco47I GGWCC 4 cut(s) 6, 230, 474, 726
Eco52I CGGCCG 1 cut(s) 370
Eco53kI GAGCTC 1 cut(s) 1384
Eco57I CTGAAG 2 cut(s) 155, 1348
EcoICRI GAGCTC 1 cut(s) 1384
EcoNI CCTNNNNNAGG 1 cut(s) 156
EcoRII CCWGG 2 cut(s) 133, 888
EcoT14I CCWWGG 1 cut(s) 140
EcoT38I GRGCYC 1 cut(s) 1386
ErhI CCWWGG 1 cut(s) 140
FaeI CATG 8 cut(s) 144, 317, 461, 845, 1340, 1426, 1525, 1548
FaqI GGGAC 1 cut(s) 739
FatI CATG 8 cut(s) 140, 313, 457, 841, 1336, 1422, 1521, 1544
FauI CCCGC 3 cut(s) 290, 742, 952
FbaI TGATCA 2 cut(s) 790, 838
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 3 cut(s) 149, 291, 597
FokI GGATG 5 cut(s) 171, 265, 830, 1313, 1571
FriOI GRGCYC 1 cut(s) 1386
Fsp4HI GCNGC 3 cut(s) 149, 291, 597
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 1 cut(s) 422
GluI GCNGC 3 cut(s) 149, 291, 597
GsuI CTGGAG 2 cut(s) 430, 872
HaeIII GGCC 5 cut(s) 139, 337, 372, 1037, 1400
HapII CCGG 2 cut(s) 1401, 1418
HgaI GACGC 1 cut(s) 319
HhaI GCGC 1 cut(s) 423
Hin1I GRCGYC 1 cut(s) 1106
Hin1II CATG 8 cut(s) 144, 317, 461, 845, 1340, 1426, 1525, 1548
Hin6I GCGC 1 cut(s) 421
HinP1I GCGC 1 cut(s) 421
HincII GTYRAC 2 cut(s) 871, 915
HindII GTYRAC 2 cut(s) 871, 915
HinfI GANTC 6 cut(s) 509, 893, 1199, 1310, 1340, 1595
HpaII CCGG 2 cut(s) 1401, 1418
HphI GGTGA 1 cut(s) 120
Hpy166II GTNNAC 4 cut(s) 82, 871, 915, 1076
Hpy188I TCNGA 7 cut(s) 262, 333, 439, 1003, 1045, 1111, 1367
Hpy188III TCNNGA 5 cut(s) 409, 571, 842, 1194, 1286
Hpy8I GTNNAC 4 cut(s) 82, 871, 915, 1076
Hpy99I CGWCG 2 cut(s) 875, 1108
HpyAV CCTTC 3 cut(s) 705, 808, 1027
HpyCH4III ACNGT 1 cut(s) 779
HpyCH4IV ACGT 3 cut(s) 873, 1106, 1569
HpyCH4V TGCA 7 cut(s) 241, 349, 463, 615, 1171, 1439, 1548
HpyF10VI GCNNNNNNNGC 3 cut(s) 145, 378, 561
HpyF3I CTNAG 5 cut(s) 330, 1010, 1044, 1242, 1527
HpySE526I ACGT 3 cut(s) 873, 1106, 1569
Hsp92I GRCGYC 1 cut(s) 1106
Hsp92II CATG 8 cut(s) 144, 317, 461, 845, 1340, 1426, 1525, 1548
HspAI GCGC 1 cut(s) 421
Ksp22I TGATCA 2 cut(s) 790, 838
Kzo9I GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
LguI GCTCTTC 1 cut(s) 45
LmnI GCTCC 4 cut(s) 21, 397, 833, 1538
Lsp1109I GCAGC 3 cut(s) 135, 302, 608
LweI GCATC 3 cut(s) 738, 1202, 1294
MaeII ACGT 3 cut(s) 873, 1106, 1569
MaeIII GTNAC 1 cut(s) 126
MalI GATC 7 cut(s) 320, 792, 808, 840, 864, 1144, 1284
MboI GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
MfeI CAATTG 2 cut(s) 1146, 1463
MflI RGATCY 2 cut(s) 862, 1282
MhlI GDGCHC 3 cut(s) 645, 1273, 1386
MluCI AATT 9 cut(s) 101, 163, 273, 440, 547, 1127, 1146, 1232, 1463
MlyI GAGTC 2 cut(s) 902, 1334
MmeI TCCRAC 2 cut(s) 240, 981
MseI TTAA 5 cut(s) 11, 68, 446, 453, 1317
MslI CAYNNNNRTG 1 cut(s) 846
MspI CCGG 2 cut(s) 1401, 1418
MspR9I CCNGG 3 cut(s) 135, 890, 1419
MunI CAATTG 2 cut(s) 1146, 1463
MvaI CCWGG 2 cut(s) 135, 890
MvnI CGCG 1 cut(s) 737
MwoI GCNNNNNNNGC 3 cut(s) 145, 378, 561
NciI CCSGG 1 cut(s) 1419
NcoI CCATGG 1 cut(s) 140
NdeII GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
NlaIII CATG 8 cut(s) 144, 317, 461, 845, 1340, 1426, 1525, 1548
NlaIV GGNNCC 4 cut(s) 232, 727, 1331, 1399
NmeAIII GCCGAG 1 cut(s) 398
NmuCI GTSAC 1 cut(s) 126
NsbI TGCGCA 1 cut(s) 422
NspI RCATGY 3 cut(s) 461, 1426, 1548
PagI TCATGA 1 cut(s) 841
PasI CCCWGGG 1 cut(s) 134
PceI AGGCCT 1 cut(s) 337
PciSI GCTCTTC 1 cut(s) 45
PfeI GAWTC 4 cut(s) 509, 1199, 1310, 1595
PflFI GACNNNGTC 1 cut(s) 1606
PfoI TCCNGGA 1 cut(s) 888
PkrI GCNGC 3 cut(s) 150, 292, 598
PleI GAGTC 2 cut(s) 901, 1334
PpsI GAGTC 2 cut(s) 901, 1334
PsiI TTATAA 1 cut(s) 272
Psp124BI GAGCTC 1 cut(s) 1386
Psp6I CCWGG 2 cut(s) 133, 888
PspGI CCWGG 2 cut(s) 133, 888
PspN4I GGNNCC 4 cut(s) 232, 727, 1331, 1399
PspPI GGNCC 7 cut(s) 6, 137, 230, 474, 726, 1036, 1398
PstNI CAGNNNCTG 1 cut(s) 836
PsuI RGATCY 2 cut(s) 862, 1282
PsyI GACNNNGTC 1 cut(s) 1606
RsaI GTAC 3 cut(s) 876, 1062, 1568
RsaNI GTAC 3 cut(s) 875, 1061, 1567
RseI CAYNNNNRTG 1 cut(s) 846
SacI GAGCTC 1 cut(s) 1386
SalI GTCGAC 1 cut(s) 869
SapI GCTCTTC 1 cut(s) 45
SaqAI TTAA 5 cut(s) 11, 68, 446, 453, 1317
SatI GCNGC 3 cut(s) 149, 291, 597
Sau3AI GATC 7 cut(s) 318, 790, 806, 838, 862, 1142, 1282
Sau96I GGNCC 7 cut(s) 6, 137, 230, 474, 726, 1036, 1398
ScaI AGTACT 1 cut(s) 1062
SchI GAGTC 2 cut(s) 902, 1334
ScrFI CCNGG 3 cut(s) 135, 890, 1419
SduI GDGCHC 3 cut(s) 645, 1273, 1386
SfaNI GCATC 3 cut(s) 738, 1202, 1294
SinI GGWCC 4 cut(s) 6, 230, 474, 726
SmiMI CAYNNNNRTG 1 cut(s) 846
SmlI CTYRAG 2 cut(s) 122, 1138
SmoI CTYRAG 2 cut(s) 122, 1138
Sse9I AATT 9 cut(s) 101, 163, 273, 440, 547, 1127, 1146, 1232, 1463
SseBI AGGCCT 1 cut(s) 337
SsiI CCGC 5 cut(s) 283, 735, 959, 1165, 1474
SstI GAGCTC 1 cut(s) 1386
StuI AGGCCT 1 cut(s) 337
StyD4I CCNGG 3 cut(s) 133, 888, 1417
StyI CCWWGG 1 cut(s) 140
TaaI ACNGT 1 cut(s) 779
TaiI ACGT 3 cut(s) 876, 1109, 1572
TaqI TCGA 8 cut(s) 354, 590, 645, 786, 870, 1221, 1359, 1405
TaqII GACCGA 1 cut(s) 462
TasI AATT 9 cut(s) 101, 163, 273, 440, 547, 1127, 1146, 1232, 1463
TatI WGTACW 1 cut(s) 1060
TfiI GAWTC 4 cut(s) 509, 1199, 1310, 1595
Tru1I TTAA 5 cut(s) 11, 68, 446, 453, 1317
Tru9I TTAA 5 cut(s) 11, 68, 446, 453, 1317
TscAI CASTG 5 cut(s) 195, 645, 660, 1278, 1446
TseFI GTSAC 1 cut(s) 126
TseI GCWGC 3 cut(s) 148, 290, 596
Tsp45I GTSAC 1 cut(s) 126
TspDTI ATGAA 8 cut(s) 267, 663, 706, 864, 1043, 1109, 1245, 1527
TspRI CASTG 5 cut(s) 195, 645, 660, 1278, 1446
Tth111I GACNNNGTC 1 cut(s) 1606
VpaK11BI GGWCC 4 cut(s) 6, 230, 474, 726
XagI CCTNNNNNAGG 1 cut(s) 156
XapI RAATTY 2 cut(s) 163, 547
XceI RCATGY 3 cut(s) 461, 1426, 1548
XmiI GTMKAC 1 cut(s) 870
ZraI GACGTC 1 cut(s) 1107
ZrmI AGTACT 1 cut(s) 1062
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.