RLG00000029355

iron ion binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000132
Physical Location & Seq
Reverse (-)
36997078 .. 36998739
1662 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029355

Sequence Viewer

Length: 1416 bp
ATGGCGCCCCTACTGCTCAAAATCCAAAATATTCCTTCCCTTCCTCTCTATACTTCACTGGTCGCCCTAGTAATCCTGGTTCTTTGTTGGATGAGATTCAAAGCCACTCATTACCCGACACTACTTAAGTTGCCCCCAGGTCCAAGGAAGCTACCAGTTATAGGAAACTTGCTTCAGTTGGTAGGTGCATTACCACACCACTGCCTAAGAGACCTGGCCAGCAAGTATGGACCTATCATTCACCTCAGAGTGGGACAAGTATCTGTTGTAGTCATTTCATCACCTGAATTAACCAAAGAGCTGTTGCAGACCCAAGAGGCTATTTTCTCGCAGCGGCCTACTAGTGATCTTGCTGTGACAGCTTCCTCCAATGTTCTTTCAGGGGTCTTTTTCAGTCCCTACAATCATTTCTGGAGACAAATGCGCAGGATTAGTGTTTTGGAGCTCCTAAGTAGAAAGAGAGTGCTGTCCTATAGATCAATAAGAGAAGAAGAGGCATGGAATCTTGTTCAATCAATTAAGGATCATTATCAAACCAAGCTTGGTCATCTTAATCTTAGTGAGGTGATTTTCTCCATGCAAAACAATGTGACTGCCCGTGCAACCTTAGGGAAGAAGTGCAAACATGGAAAGGAGTTTACAGCATTGATCAACGAGTCACTGCTCCTCGCCGGAGGCTTTGCCCTGGCTGATTTGTTCCCTTCCCTGAAATTCCTCCCTTATCTCACAGGTATCAGATCTGCCCTTGAGAAAATAAACAAAAAGGTCGACCGGATTCTTAATGATGTCATTAGTGAACATAAAGATAAAACAATTAGCAGAGCTCATGATGCTGCCGATGAACAAGAAGATGCTCTTGTTGATGTCCTTCTTAAACTCCAAGACGCTGGTGGGCTTCAATTTGATCTCACAACAACCCACATCAAAGCTGTAACCCTGGAAATGTATGCCGGTGGAAGCGAAACTTCAGCAACTACCACAGAATGGGCAATGTCCGAACTCATGAGAAATCCAAAAGTAATGCAGAAAGCACAAGCAGAAGTGCGACAAGTTCTTGCCAGGAGGAGGAAAATCTATGAGGCCGACATAGAGAAAATAGAATACTTGAAGTTAGTAATACGTGAAACTCTACGGTTACATCCTCCAGCTACCTTAATTGCAAGAGAAGCAAGCAACAGCACTAAGATCATTGGGTATGCTATACCAGTACAGACCAAAGTTTTAATCAATGTATGGGCAATGGGGAGAGATCCAACACATTGGGGTGCAGAAGCTGACTGCTTTCAGCCTGAGAGGTTCCAAGGTAGTGGTTCCATTGATTATAGAGGGTCCAATTTGGAATTTATTCCATTTGGAGCTGGGAAAAGAATATGTCCAGGCATAACATTTGGAACTCCCCAGTGGGACCAAACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
p450

Protein Analysis

472

Amino Acids

52.82

Weight (kDa)

9.35

Isoelectric Point (pI)

40.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 45 - 465 1e-90 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000132)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03210 FvH4_3g24170 FvH4_3g24171 FvH4_6g02110 FvH4_6g02110 FvH4_6g21500 FvH4_6g44530 FvH4_6g44700 FvH4_6g44700 FvH4_6g44710 FvH4_6g44730 FvH4_6g44750 FvH4_6g44751 FvH4_6g44751 FvH4_6g53570
malus_domestica MD00G1138500.v1.1 MD00G1138600.v1.1 MD00G1138700.v1.1 MD00G1153200.v1.1 MD00G1153300.v1.1 MD00G1153400.v1.1 MD00G1153500.v1.1 MD00G1153600.v1.1 MD00G1153800.v1.1 MD00G1153900.v1.1 MD00G1154000.v1.1 MD03G1187300.v1.1 MD04G1245500.v1.1 MD11G1202200.v1.1 MD11G1202300.v1.1 MD11G1202500.v1.1 MD14G1096600.v1.1 MD14G1096700.v1.1 MD17G1000100.v1.1 MD17G1000200.v1.1 MD17G1000300.v1.1
prunus_persica Prupe.1G492000_v2.0.a1 Prupe.1G492100_v2.0.a1 Prupe.2G073800_v2.0.a1 Prupe.2G073900_v2.0.a1 Prupe.2G074300_v2.0.a1 Prupe.3G306800_v2.0.a1 Prupe.4G237900_v2.0.a1 Prupe.4G238000_v2.0.a1 Prupe.4G238200_v2.0.a1 Prupe.4G238300_v2.0.a1 Prupe.4G238600_v2.0.a1 Prupe.4G239200_v2.0.a1 Prupe.4G239300_v2.0.a1
pyrus_communis pycom03g13950 pycom03g14010 pycom04g21620 pycom04g21630 pycom111g00820 pycom11g17490 pycom11g17500 pycom17g00860 pycom17g00880
rosa_chinensis RchiOBHm_Chr1g0325151 RchiOBHm_Chr1g0329431 RchiOBHm_Chr1g0334551 RchiOBHm_Chr1g0334561 RchiOBHm_Chr1g0336531 RchiOBHm_Chr1g0336541 RchiOBHm_Chr2g0175621 RchiOBHm_Chr2g0175641 RchiOBHm_Chr2g0175651 RchiOBHm_Chr2g0175701 RchiOBHm_Chr2g0175711 RchiOBHm_Chr3g0447771 RchiOBHm_Chr3g0447781 RchiOBHm_Chr3g0447791 RchiOBHm_Chr3g0447801 RchiOBHm_Chr5g0043061 RchiOBHm_Chr5g0043071 RchiOBHm_Chr5g0043221 RchiOBHm_Chr5g0043231 RchiOBHm_Chr5g0043921 RchiOBHm_Chr5g0054481 RchiOBHm_Chr5g0054491 RchiOBHm_Chr5g0054511 RchiOBHm_Chr5g0054551 RchiOBHm_Chr5g0054561 RchiOBHm_Chr5g0054581 RchiOBHm_Chr6g0296341
rosa_laevigata RLG00000011704 RLG00000022344 RLG00000022345 RLG00000022350 RLG00000022351 RLG00000025970 RLG00000025971 RLG00000025972 RLG00000029355 RLG00000029356 RLG00000029886 RLG00000030155 RLG00000034172 RLG00000034938
rosa_multiflora Rmu_co8138254.1_g000001 Rmu_co8268883.1_g000001 Rmu_co8271167.1_g000001 Rmu_co8294571.1_g000001 Rmu_co8350865.1_g000001 Rmu_co8364355.1_g000001 Rmu_co8416839.1_g000001 Rmu_sc0000698.1_g000089 Rmu_sc0000698.1_g000146 Rmu_sc0000998.1_g000014 Rmu_sc0000998.1_g000015 Rmu_sc0000998.1_g000020 Rmu_sc0000998.1_g000021 Rmu_sc0001478.1_g000005 Rmu_sc0001654.1_g000011 Rmu_sc0001981.1_g000002 Rmu_sc0002655.1_g000005 Rmu_sc0002655.1_g000011 Rmu_sc0002655.1_g000018 Rmu_sc0005044.1_g000025 Rmu_sc0005591.1_g000001 Rmu_sc0007742.1_g000012 Rmu_sc0008148.1_g000071 Rmu_sc0009324.1_g000003 Rmu_sc0009324.1_g000004 Rmu_sc0009324.1_g000005 Rmu_sc0014424.1_g000003 Rmu_sc0019317.1_g000001 Rmu_sc0027639.1_g000001
rosa_roxburghii Rroxscaffold_1G00026360 Rroxscaffold_1G00026400 Rroxscaffold_1G00037560 Rroxscaffold_2G00077140 Rroxscaffold_2G00077180 Rroxscaffold_4G00315510 Rroxscaffold_4G00315520 Rroxscaffold_4G00324880 Rroxscaffold_6G00425980 Rroxscaffold_6G00425990 Rroxscaffold_7G00171610 Rroxscaffold_7G00178470 Rroxscaffold_7G00178490
rosa_rugosa Rorug01G0050000 Rorug01G0079800 Rorug01G0126000 Rorug01G0126400 Rorug02G0586700 Rorug02G0586700 Rorug02G0586800 Rorug02G0587000 Rorug02G0605600 Rorug02G0605700 Rorug05G0123000 Rorug05G0204600 Rorug05G0204800 Rorug05G0209100 Rorug05G0286600 Rorug05G0286800 Rorug05G0286900 Rorug06G0261200 Rorug07G0200800
rosa_samantha Rh1AG098700 Rh1BG054000 Rh1BG078400 Rh1BG078500 Rh1BG078600 Rh1BG115300 Rh1CG094700 Rh1CG138500 Rh2BG676800 Rh2BG677200 Rh2CG639900 Rh2CG640000 Rh2CG640100 Rh2CG640400 Rh2CG640500 Rh2DG690700 Rh2DG691000 Rh2DG691100 Rh3AG005200 Rh3BG004800 Rh3BG004900 Rh3DG005100 Rh3DG005300 Rh5AG290500 Rh5AG357000 Rh5AG357100 Rh5AG357300 Rh5BG296700 Rh5BG369300 Rh5CG326700 Rh5CG392000 Rh5DG310400 Rh6BG381100 Rh6DG373800
rosa_wichuraiana Rw0G010260 Rw1G007710 Rw1G009530 Rw1G011920 Rw2G004130 Rw2G054610 Rw3G000390 Rw5G026850 Rw5G026940 Rw5G033530 Rw5G033720 Rw5G033730 Rw5G033760 Rw6G032520

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 425
AccB1I GGYRCC 1 cut(s) 4
AccB7I CCANNNNNTGG 1 cut(s) 984
AccI GTMKAC 1 cut(s) 768
AciI CCGC 1 cut(s) 334
AclWI GGATC 2 cut(s) 531, 1244
AcoI YGGCCR 1 cut(s) 216
AcsI RAATTY 2 cut(s) 710, 1340
AcuI CTGAAG 2 cut(s) 158, 951
AcyI GRCGYC 1 cut(s) 5
AfaI GTAC 1 cut(s) 1209
AfiI CCNNNNNNNGG 4 cut(s) 161, 250, 984, 1065
AflII CTTAAG 1 cut(s) 125
AgsI TTSAA 4 cut(s) 100, 512, 899, 1108
AhlI ACTAGT 1 cut(s) 341
AjnI CCWGG 7 cut(s) 75, 136, 213, 684, 936, 1058, 1375
Alw21I GWGCWC 2 cut(s) 447, 826
Alw26I GTCTC 2 cut(s) 204, 409
AlwI GGATC 2 cut(s) 531, 1244
AlwNI CAGNNNCTG 1 cut(s) 1274
AoxI GGCC 3 cut(s) 216, 335, 1080
ApeKI GCWGC 2 cut(s) 331, 833
ApoI RAATTY 2 cut(s) 710, 1340
Asp700I GAANNNNTTC 1 cut(s) 1344
AspLEI GCGC 2 cut(s) 7, 426
AspS9I GGNCC 4 cut(s) 140, 230, 1329, 1405
AsuHPI GGTGA 3 cut(s) 233, 273, 577
AvaII GGWCC 4 cut(s) 140, 230, 1329, 1405
AxyI CCTNAGG 1 cut(s) 607
BalI TGGCCA 1 cut(s) 218
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 447, 826
Bbv12I GWGCWC 2 cut(s) 447, 826
BbvI GCAGC 2 cut(s) 343, 820
BciT130I CCWGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
BclI TGATCA 1 cut(s) 648
BcoDI GTCTC 2 cut(s) 204, 409
BcuI ACTAGT 1 cut(s) 341
BfaI CTAG 2 cut(s) 68, 342
BfmI CTRYAG 1 cut(s) 472
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 125
BglII AGATCT 1 cut(s) 737
BisI GCNGC 3 cut(s) 332, 335, 834
BlsI GCNGC 3 cut(s) 333, 336, 835
Bme1390I CCNGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
Bme18I GGWCC 4 cut(s) 140, 230, 1329, 1405
BmgT120I GGNCC 4 cut(s) 140, 230, 1329, 1405
BmiI GGNNCC 5 cut(s) 6, 1298, 1312, 1330, 1406
BmrFI CCNGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
BmrI ACTGGG 1 cut(s) 1393
BmsI GCATC 2 cut(s) 820, 841
BmuI ACTGGG 1 cut(s) 1393
BpmI CTGGAG 2 cut(s) 433, 1128
BpuEI CTTGAG 1 cut(s) 767
BsaAI YACGTR 1 cut(s) 1121
BsaBI GATNNNNATC 1 cut(s) 528
BsaHI GRCGYC 1 cut(s) 5
BsaI GGTCTC 1 cut(s) 204
BsaJI CCNNGG 5 cut(s) 136, 143, 684, 936, 1300
BsaWI WCCGGW 1 cut(s) 771
Bsc4I CCNNNNNNNGG 4 cut(s) 161, 250, 984, 1065
Bse118I RCCGGY 1 cut(s) 950
Bse1I ACTGG 4 cut(s) 63, 155, 1205, 1399
Bse21I CCTNAGG 1 cut(s) 607
Bse3DI GCAATG 2 cut(s) 996, 1245
Bse8I GATNNNNATC 1 cut(s) 528
BseBI CCWGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
BseDI CCNNGG 5 cut(s) 136, 143, 684, 936, 1300
BseGI GGATG 2 cut(s) 96, 1138
BseJI GATNNNNATC 1 cut(s) 528
BseLI CCNNNNNNNGG 4 cut(s) 161, 250, 984, 1065
BseMI GCAATG 2 cut(s) 996, 1245
BseMII CTCAG 2 cut(s) 259, 1281
BseNI ACTGG 4 cut(s) 63, 155, 1205, 1399
BseRI GAGGAG 2 cut(s) 656, 1078
BseXI GCAGC 2 cut(s) 343, 820
BseYI CCCAGC 1 cut(s) 1358
BsgI GTGCAG 1 cut(s) 1287
Bsh1285I CGRYCG 1 cut(s) 772
BshFI GGCC 3 cut(s) 218, 337, 1082
BshNI GGYRCC 1 cut(s) 4
BsiEI CGRYCG 1 cut(s) 772
BsiHKAI GWGCWC 2 cut(s) 447, 826
BsiSI CCGG 3 cut(s) 672, 772, 951
BslFI GGGAC 2 cut(s) 267, 381
BslI CCNNNNNNNGG 4 cut(s) 161, 250, 984, 1065
BsmAI GTCTC 2 cut(s) 204, 409
BsmFI GGGAC 2 cut(s) 267, 381
BsnI GGCC 3 cut(s) 218, 337, 1082
Bso31I GGTCTC 1 cut(s) 204
Bsp1286I GDGCHC 2 cut(s) 447, 826
Bsp143I GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
BspACI CCGC 1 cut(s) 334
BspANI GGCC 3 cut(s) 218, 337, 1082
BspCNI CTCAG 2 cut(s) 258, 1282
BspHI TCATGA 2 cut(s) 826, 1002
BspLI GGNNCC 5 cut(s) 6, 1298, 1312, 1330, 1406
BspPI GGATC 2 cut(s) 531, 1244
BspT107I GGYRCC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 125
BspTNI GGTCTC 1 cut(s) 204
BsrDI GCAATG 2 cut(s) 996, 1245
BsrFI RCCGGY 1 cut(s) 950
BsrI ACTGG 4 cut(s) 63, 155, 1205, 1399
BssAI RCCGGY 1 cut(s) 950
BssECI CCNNGG 5 cut(s) 136, 143, 684, 936, 1300
BssMI GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
BssNI GRCGYC 1 cut(s) 5
BssT1I CCWWGG 2 cut(s) 143, 1300
Bst2UI CCWGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
Bst4CI ACNGT 1 cut(s) 1134
Bst6I CTCTTC 1 cut(s) 486
BstACI GRCGYC 1 cut(s) 5
BstAFI CTTAAG 1 cut(s) 125
BstBAI YACGTR 1 cut(s) 1121
BstC8I GCNNGC 2 cut(s) 220, 1171
BstDEI CTNAG 7 cut(s) 206, 245, 449, 557, 607, 1182, 1290
BstF5I GGATG 2 cut(s) 96, 1138
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 2 cut(s) 7, 426
BstKTI GATC 8 cut(s) 349, 479, 526, 651, 740, 907, 1188, 1252
BstMAI GTCTC 2 cut(s) 204, 409
BstMBI GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
BstMCI CGRYCG 1 cut(s) 772
BstMWI GCNNNNNNNGC 4 cut(s) 13, 359, 830, 1166
BstNI CCWGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
BstSCI CCNGG 7 cut(s) 75, 136, 213, 684, 936, 1058, 1375
BstSFI CTRYAG 1 cut(s) 472
BstV1I GCAGC 2 cut(s) 343, 820
BstX2I RGATCY 2 cut(s) 737, 1249
BstXI CCANNNNNNTGG 3 cut(s) 887, 1260, 1307
BstYI RGATCY 2 cut(s) 737, 1249
Bsu36I CCTNAGG 1 cut(s) 607
BsuRI GGCC 3 cut(s) 218, 337, 1082
BtsCI GGATG 2 cut(s) 96, 1138
BtsI GCAGTG 2 cut(s) 199, 659
BtsIMutI CAGTG 4 cut(s) 56, 199, 659, 1406
Cac8I GCNNGC 2 cut(s) 220, 1171
CaiI CAGNNNCTG 1 cut(s) 1274
CciI TCATGA 2 cut(s) 826, 1002
CfoI GCGC 2 cut(s) 7, 426
Cfr10I RCCGGY 1 cut(s) 950
Cfr13I GGNCC 4 cut(s) 140, 230, 1329, 1405
CseI GACGC 1 cut(s) 893
Csp6I GTAC 1 cut(s) 1208
CviAII CATG 5 cut(s) 498, 577, 626, 827, 1003
CviQI GTAC 1 cut(s) 1208
DdeI CTNAG 7 cut(s) 206, 245, 449, 557, 607, 1182, 1290
DinI GGCGCC 1 cut(s) 6
DpnI GATC 8 cut(s) 348, 478, 525, 650, 739, 906, 1187, 1251
DpnII GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
EaeI YGGCCR 1 cut(s) 216
Eam1104I CTCTTC 1 cut(s) 486
EarI CTCTTC 1 cut(s) 486
Ecl136II GAGCTC 2 cut(s) 445, 824
Eco130I CCWWGG 2 cut(s) 143, 1300
Eco24I GRGCYC 2 cut(s) 447, 826
Eco31I GGTCTC 1 cut(s) 204
Eco47I GGWCC 4 cut(s) 140, 230, 1329, 1405
Eco53kI GAGCTC 2 cut(s) 445, 824
Eco57I CTGAAG 2 cut(s) 158, 951
Eco81I CCTNAGG 1 cut(s) 607
EcoICRI GAGCTC 2 cut(s) 445, 824
EcoRII CCWGG 7 cut(s) 75, 136, 213, 684, 936, 1058, 1375
EcoT14I CCWWGG 2 cut(s) 143, 1300
EcoT38I GRGCYC 2 cut(s) 447, 826
EgeI GGCGCC 1 cut(s) 6
EheI GGCGCC 1 cut(s) 6
ErhI CCWWGG 2 cut(s) 143, 1300
FaeI CATG 5 cut(s) 501, 580, 629, 830, 1006
FalI AAGNNNNNCTT 4 cut(s) 840, 872, 949, 981
FaqI GGGAC 2 cut(s) 267, 381
FatI CATG 5 cut(s) 497, 576, 625, 826, 1002
FbaI TGATCA 1 cut(s) 648
FblI GTMKAC 1 cut(s) 768
Fnu4HI GCNGC 3 cut(s) 332, 335, 834
FokI GGATG 2 cut(s) 103, 1125
FriOI GRGCYC 2 cut(s) 447, 826
Fsp4HI GCNGC 3 cut(s) 332, 335, 834
FspBI CTAG 2 cut(s) 68, 342
FspI TGCGCA 1 cut(s) 425
GlaI GCGC 2 cut(s) 6, 425
GluI GCNGC 3 cut(s) 332, 335, 834
GsaI CCCAGC 1 cut(s) 1362
GsuI CTGGAG 2 cut(s) 433, 1128
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 3 cut(s) 218, 337, 1082
HapII CCGG 3 cut(s) 672, 772, 951
HgaI GACGC 1 cut(s) 893
HhaI GCGC 2 cut(s) 7, 426
Hin1I GRCGYC 1 cut(s) 5
Hin1II CATG 5 cut(s) 501, 580, 629, 830, 1006
Hin6I GCGC 2 cut(s) 5, 424
HinP1I GCGC 2 cut(s) 5, 424
HincII GTYRAC 1 cut(s) 769
HindII GTYRAC 1 cut(s) 769
HindIII AAGCTT 1 cut(s) 539
HinfI GANTC 4 cut(s) 96, 502, 656, 775
HpaII CCGG 3 cut(s) 672, 772, 951
HphI GGTGA 3 cut(s) 233, 273, 577
Hpy166II GTNNAC 3 cut(s) 639, 769, 797
Hpy188I TCNGA 3 cut(s) 248, 737, 997
Hpy188III TCNNGA 3 cut(s) 412, 827, 1003
Hpy8I GTNNAC 3 cut(s) 639, 769, 797
HpyAV CCTTC 4 cut(s) 45, 50, 711, 878
HpyCH4III ACNGT 1 cut(s) 1134
HpyCH4IV ACGT 1 cut(s) 1120
HpyCH4V TGCA 8 cut(s) 188, 307, 580, 602, 621, 1024, 1160, 1268
HpyF10VI GCNNNNNNNGC 4 cut(s) 13, 359, 830, 1166
HpyF3I CTNAG 7 cut(s) 206, 245, 449, 557, 607, 1182, 1290
HpySE526I ACGT 1 cut(s) 1120
Hsp92I GRCGYC 1 cut(s) 5
Hsp92II CATG 5 cut(s) 501, 580, 629, 830, 1006
HspAI GCGC 2 cut(s) 5, 424
KasI GGCGCC 1 cut(s) 4
Ksp22I TGATCA 1 cut(s) 648
Kzo9I GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
LmnI GCTCC 4 cut(s) 442, 450, 669, 1355
Lsp1109I GCAGC 2 cut(s) 343, 820
LweI GCATC 2 cut(s) 820, 841
MaeI CTAG 2 cut(s) 68, 342
MaeII ACGT 1 cut(s) 1120
MaeIII GTNAC 5 cut(s) 355, 589, 657, 931, 1134
MalI GATC 8 cut(s) 348, 478, 525, 650, 739, 906, 1187, 1251
MboI GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
MboII GAAGA 4 cut(s) 500, 503, 625, 860
MflI RGATCY 2 cut(s) 737, 1249
MhlI GDGCHC 2 cut(s) 447, 826
MlsI TGGCCA 1 cut(s) 218
MluCI AATT 8 cut(s) 287, 516, 710, 813, 899, 1155, 1333, 1340
MluNI TGGCCA 1 cut(s) 218
Mly113I GGCGCC 1 cut(s) 5
MlyI GAGTC 1 cut(s) 665
MmeI TCCRAC 2 cut(s) 68, 1277
Mox20I TGGCCA 1 cut(s) 218
MroXI GAANNNNTTC 1 cut(s) 1344
MscI TGGCCA 1 cut(s) 218
MseI TTAA 8 cut(s) 126, 290, 519, 552, 780, 873, 1154, 1223
MslI CAYNNNNRTG 1 cut(s) 1263
Msp20I TGGCCA 1 cut(s) 218
MspA1I CMGCKG 1 cut(s) 334
MspCI CTTAAG 1 cut(s) 125
MspI CCGG 3 cut(s) 672, 772, 951
MspR9I CCNGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
MvaI CCWGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
MwoI GCNNNNNNNGC 4 cut(s) 13, 359, 830, 1166
NarI GGCGCC 1 cut(s) 5
NdeII GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
NlaIII CATG 5 cut(s) 501, 580, 629, 830, 1006
NlaIV GGNNCC 5 cut(s) 6, 1298, 1312, 1330, 1406
NmuCI GTSAC 3 cut(s) 355, 589, 657
NsbI TGCGCA 1 cut(s) 425
PagI TCATGA 2 cut(s) 826, 1002
PdmI GAANNNNTTC 1 cut(s) 1344
PfeI GAWTC 3 cut(s) 96, 502, 775
PflMI CCANNNNNTGG 1 cut(s) 984
PkrI GCNGC 3 cut(s) 333, 336, 835
PleI GAGTC 1 cut(s) 664
PluTI GGCGCC 1 cut(s) 8
PpsI GAGTC 1 cut(s) 664
Ppu21I YACGTR 1 cut(s) 1121
Psp124BI GAGCTC 2 cut(s) 447, 826
Psp6I CCWGG 7 cut(s) 75, 136, 213, 684, 936, 1058, 1375
PspFI CCCAGC 1 cut(s) 1358
PspGI CCWGG 7 cut(s) 75, 136, 213, 684, 936, 1058, 1375
PspN4I GGNNCC 5 cut(s) 6, 1298, 1312, 1330, 1406
PspPI GGNCC 4 cut(s) 140, 230, 1329, 1405
PsrI GAACNNNNNNTAC 2 cut(s) 63, 95
PstNI CAGNNNCTG 1 cut(s) 1274
PsuI RGATCY 2 cut(s) 737, 1249
RsaI GTAC 1 cut(s) 1209
RsaNI GTAC 1 cut(s) 1208
RseI CAYNNNNRTG 1 cut(s) 1263
SacI GAGCTC 2 cut(s) 447, 826
SalI GTCGAC 1 cut(s) 767
SaqAI TTAA 8 cut(s) 126, 290, 519, 552, 780, 873, 1154, 1223
SatI GCNGC 3 cut(s) 332, 335, 834
Sau3AI GATC 8 cut(s) 346, 476, 523, 648, 737, 904, 1185, 1249
Sau96I GGNCC 4 cut(s) 140, 230, 1329, 1405
SchI GAGTC 1 cut(s) 665
ScrFI CCNGG 7 cut(s) 77, 138, 215, 686, 938, 1060, 1377
SduI GDGCHC 2 cut(s) 447, 826
SfaNI GCATC 2 cut(s) 820, 841
SfcI CTRYAG 1 cut(s) 472
SfoI GGCGCC 1 cut(s) 6
SinI GGWCC 4 cut(s) 140, 230, 1329, 1405
SmiMI CAYNNNNRTG 1 cut(s) 1263
SmlI CTYRAG 2 cut(s) 125, 746
SmoI CTYRAG 2 cut(s) 125, 746
SpeI ACTAGT 1 cut(s) 341
Sse9I AATT 8 cut(s) 287, 516, 710, 813, 899, 1155, 1333, 1340
SsiI CCGC 1 cut(s) 334
SspDI GGCGCC 1 cut(s) 4
SspI AATATT 1 cut(s) 31
SspMI CTAG 2 cut(s) 68, 342
SstI GAGCTC 2 cut(s) 447, 826
StyD4I CCNGG 7 cut(s) 75, 136, 213, 684, 936, 1058, 1375
StyI CCWWGG 2 cut(s) 143, 1300
TaaI ACNGT 1 cut(s) 1134
TaiI ACGT 1 cut(s) 1123
TaqI TCGA 1 cut(s) 768
TasI AATT 8 cut(s) 287, 516, 710, 813, 899, 1155, 1333, 1340
TatI WGTACW 1 cut(s) 1207
TauI GCSGC 1 cut(s) 337
TfiI GAWTC 3 cut(s) 96, 502, 775
Tru1I TTAA 8 cut(s) 126, 290, 519, 552, 780, 873, 1154, 1223
Tru9I TTAA 8 cut(s) 126, 290, 519, 552, 780, 873, 1154, 1223
TscAI CASTG 4 cut(s) 63, 206, 666, 1406
TseFI GTSAC 3 cut(s) 355, 589, 657
TseI GCWGC 2 cut(s) 331, 833
Tsp45I GTSAC 3 cut(s) 355, 589, 657
TspDTI ATGAA 2 cut(s) 267, 855
TspRI CASTG 4 cut(s) 63, 206, 666, 1406
Van91I CCANNNNNTGG 1 cut(s) 984
Vha464I CTTAAG 1 cut(s) 125
VpaK11BI GGWCC 4 cut(s) 140, 230, 1329, 1405
XapI RAATTY 2 cut(s) 710, 1340
XcmI CCANNNNNNNNNTGG 1 cut(s) 887
XmiI GTMKAC 1 cut(s) 768
XmnI GAANNNNTTC 1 cut(s) 1344
XspI CTAG 2 cut(s) 68, 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.