Prupe.3G033100_v2.0.a1

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
2446191 .. 2450817
4627 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G033100.1

Sequence Viewer

Length: 1068 bp
ATGGCAAATATAAGCCTTCTCATTATCACAACCCAAAGCCATGGCCATTCTGGGTTGCCAAAAAGACATGCACCTCTTTTCATACTTGGGGATTCAGTCTTTGAGGCTGGAAATAATAACTACTTTAACACTACAGCCCGGGCAAATTATAAGCCATATGGTGAAACCTACTTTAAGTACCCAACTGGGAGATTTTCTGATGGTCGTCAAGTTCCAGATTTTATTGCTGAGTATGCGAAGTTGCCATTGATTCCACCATATCTACAGCCCGACAATCATGAATTTTCATATGGTATCAACTTTGCATCTGCTGGAGCTGGTGCTATGGTTGAAACTCGCCAAGGCGCGGTGATAGGCCTTCCTTCTCAACTGTCAAATTTCAAGATCGTTAGGAAGTCCTTGAGGAAGAAACTGGGCAATGAAGAAGCCAAATCTCTGCTATCAAGAGCTGTTTACTTTTTTAGTATTGGAAGCAACGATTACATTTTCCCGTTCGACACGGACCCAAGTGTGCTTGGATCCTACTCTCATCAGGAATATGTGGACCTGGTGATAGGCAACATAACTTCAGTGGTCAAAGGAATCTATAAGAAAGGAGGAAGAAATTTTGCGTTGCTTAACCTCTGGCCTATTGCTTGTCTTCCATACGCAAGAGCACTTAAAACGGAAAAAAAAGGTGCTTGCTTTGATGAGTTTACACCATTTGTGAAACTACACAACAAAGCACTTGCCAAAGCCCTACAGAAGCTGGAGAAGAAACTCAAGGGATTCAGATACTCAATCTCCGATTTTAACGAATTTTTGACACAGAGAATGAACCACCCATCTAAATATGGTTTCGTGGAAGGGGAGGCGGCATGCTGTGGAAGTGGTGTATATGGAGGAATTTATAACTGTGGAGGAAAGAGGATTGCCAAAGAGTATAATTTATGCAAGAATGTTAGTGAATATGTCTTCTATGACTCTGCTCATCCAACCGACAGGGTCTACGAACAGTTTGCCAAGCAAATATGGAGTGGAAATTCCATCACCGCGCCTTACAATCTGAAAGCACTATTTGAAACTTAG

Protein Analysis

356

Amino Acids

39.7

Weight (kDa)

9.22

Isoelectric Point (pI)

30.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000193)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53940 AT1G53940 AT1G53970 AT1G53970 AT1G53990 AT3G14225 AT3G14225 AT5G40990
fragaria_vesca FvH4_6g34510 FvH4_6g35571 FvH4_6g35571 FvH4_6g35572 FvH4_6g35580 FvH4_6g35580 FvH4_6g35584 FvH4_6g35600 FvH4_6g35610 FvH4_6g35630 FvH4_6g35631
malus_domestica MD00G1137100.v1.1 MD01G1122400.v1.1 MD07G1191900.v1.1 MD09G1174600.v1.1 MD09G1174700.v1.1 MD09G1175100.v1.1 MD17G1151700.v1.1 MD17G1151800.v1.1
prunus_persica Prupe.3G032700_v2.0.a1 Prupe.3G032900_v2.0.a1 Prupe.3G033100_v2.0.a1 Prupe.3G033200_v2.0.a1 Prupe.3G033300_v2.0.a1 Prupe.3G033400_v2.0.a1 Prupe.3G033500_v2.0.a1 Prupe.3G033600_v2.0.a1
pyrus_communis pycom01g14930 pycom09g09170 pycom09g09180 pycom09g09190 pycom09g09220 pycom17g14510
rosa_chinensis RchiOBHm_Chr2g0147161 RchiOBHm_Chr2g0147301 RchiOBHm_Chr2g0147311 RchiOBHm_Chr2g0147391 RchiOBHm_Chr2g0147431 RchiOBHm_Chr2g0147441 RchiOBHm_Chr2g0147471 RchiOBHm_Chr2g0147491 RchiOBHm_Chr2g0147591 RchiOBHm_Chr2g0147911 RchiOBHm_Chr2g0148061 RchiOBHm_Chr4g0407441 RchiOBHm_Chr4g0407471 RchiOBHm_Chr6g0252881 RchiOBHm_Chr7g0228391 RchiOBHm_Chr7g0228411
rosa_laevigata RLG00000001566 RLG00000020247 RLG00000020250 RLG00000020251 RLG00000020252 RLG00000020255 RLG00000020258 RLG00000020261 RLG00000020262 RLG00000020264 RLG00000020293 RLG00000020307 RLG00000030814
rosa_multiflora Rmu_co8112460.1_g000001 Rmu_co8353483.1_g000001 Rmu_co8492209.1_g000001 Rmu_sc0000308.1_g000061 Rmu_sc0000538.1_g000003 Rmu_sc0001159.1_g000017 Rmu_sc0001159.1_g000023 Rmu_sc0001159.1_g000050 Rmu_sc0001880.1_g000011 Rmu_sc0006302.1_g000003 Rmu_sc0008083.1_g000003 Rmu_sc0010661.1_g000002 Rmu_sc0017091.1_g000001 Rmu_sc0021146.1_g000001
rosa_roxburghii Rroxscaffold_2G00099470 Rroxscaffold_2G00099500 Rroxscaffold_2G00099530 Rroxscaffold_2G00099590 Rroxscaffold_2G00113160 Rroxscaffold_2G00113180 Rroxscaffold_3G00231150 Rroxscaffold_4G00332370 Rroxscaffold_5G00352070
rosa_rugosa Rorug02G0398800 Rorug02G0399100 Rorug02G0399200 Rorug02G0399300 Rorug02G0400100 Rorug02G0400200 Rorug02G0400300.1 Rorug02G0403000 Rorug05G0546600 Rorug05G0547200 Rorug07G0249100 Rorug07G0249200.1 RorugPtG0001700.1
rosa_samantha Rh1CG003800 Rh2AG456000 Rh2AG456200 Rh2AG456400 Rh2AG456500 Rh2AG456900 Rh2AG457200 Rh2AG457500 Rh2AG457600 Rh2AG457700 Rh2AG460000 Rh2AG460400 Rh2BG468900 Rh2BG469000 Rh2BG469800 Rh2BG469900 Rh2BG470000 Rh2BG473300 Rh2BG473800 Rh2CG443400 Rh2CG443800 Rh2CG443900 Rh2CG444400 Rh2CG444600 Rh2CG445000 Rh2CG445100 Rh2CG447300 Rh2CG447600 Rh2DG478200 Rh2DG478300 Rh2DG479300 Rh2DG479500 Rh2DG482200 Rh4AG048300 Rh4CG051600 Rh4CG051700 Rh4CG151200 Rh7AG401800 Rh7CG420700 Rh7DG397900
rosa_wichuraiana Rw2G037300 Rw2G037330 Rw2G037350 Rw2G037360 Rw2G037390 Rw2G037410 Rw2G037620 Rw4G003830 Rw6G005020 Rw6G005580 Rw7G033400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 150, 891
AccI GTMKAC 1 cut(s) 987
AccII CGCG 2 cut(s) 347, 1034
AciI CCGC 3 cut(s) 347, 854, 1032
AclWI GGATC 2 cut(s) 513, 526
AcoI YGGCCR 1 cut(s) 43
AcsI RAATTY 6 cut(s) 281, 376, 604, 797, 885, 1021
AcuI CTGAAG 1 cut(s) 552
AfaI GTAC 1 cut(s) 179
AfiI CCNNNNNNNGG 1 cut(s) 346
AgsI TTSAA 3 cut(s) 332, 382, 1061
AjnI CCWGG 1 cut(s) 546
AluBI AGCT 3 cut(s) 317, 449, 748
AluI AGCT 3 cut(s) 317, 449, 748
Alw21I GWGCWC 1 cut(s) 658
AlwI GGATC 2 cut(s) 513, 526
AlwNI CAGNNNCTG 1 cut(s) 748
Ama87I CYCGRG 1 cut(s) 138
AoxI GGCC 3 cut(s) 43, 355, 626
ApoI RAATTY 6 cut(s) 281, 376, 604, 797, 885, 1021
AspLEI GCGC 2 cut(s) 347, 1036
AspS9I GGNCC 2 cut(s) 502, 544
AsuC2I CCSGG 2 cut(s) 139, 140
AsuHPI GGTGA 4 cut(s) 173, 361, 562, 1021
AvaI CYCGRG 1 cut(s) 138
AvaII GGWCC 2 cut(s) 502, 544
BalI TGGCCA 1 cut(s) 45
BamHI GGATCC 1 cut(s) 518
BbsI GAAGAC 2 cut(s) 632, 946
Bbv12I GWGCWC 1 cut(s) 658
BccI CCATC 3 cut(s) 194, 832, 1034
BcgI CGANNNNNNTGC 2 cut(s) 980, 1014
BciT130I CCWGG 1 cut(s) 548
BcnI CCSGG 2 cut(s) 139, 140
BfmI CTRYAG 3 cut(s) 132, 263, 740
BisI GCNGC 1 cut(s) 855
BlsI GCNGC 1 cut(s) 856
Bme1390I CCNGG 3 cut(s) 139, 140, 548
Bme18I GGWCC 2 cut(s) 502, 544
BmeT110I CYCGRG 1 cut(s) 138
BmgT120I GGNCC 2 cut(s) 502, 544
BmiI GGNNCC 2 cut(s) 504, 520
BmrFI CCNGG 3 cut(s) 139, 140, 548
BmrI ACTGGG 2 cut(s) 195, 422
BmsI GCATC 1 cut(s) 314
BmuI ACTGGG 2 cut(s) 195, 422
BpiI GAAGAC 2 cut(s) 632, 946
BpmI CTGGAG 2 cut(s) 333, 770
BpuEI CTTGAG 2 cut(s) 421, 746
BpuMI CCSGG 2 cut(s) 139, 140
BsaJI CCNNGG 3 cut(s) 40, 138, 340
BsaXI ACNNNNNCTCC 2 cut(s) 767, 797
Bsc4I CCNNNNNNNGG 1 cut(s) 346
Bse1I ACTGG 2 cut(s) 190, 417
Bse3DI GCAATG 1 cut(s) 424
BseBI CCWGG 1 cut(s) 548
BseDI CCNNGG 3 cut(s) 40, 138, 340
BseGI GGATG 1 cut(s) 970
BseLI CCNNNNNNNGG 1 cut(s) 346
BseMI GCAATG 1 cut(s) 424
BseMII CTCAG 1 cut(s) 219
BseNI ACTGG 2 cut(s) 190, 417
Bsh1236I CGCG 2 cut(s) 347, 1034
BshFI GGCC 3 cut(s) 45, 357, 628
BsiHKAI GWGCWC 1 cut(s) 658
BsiHKCI CYCGRG 1 cut(s) 138
BsiSI CCGG 1 cut(s) 139
BslI CCNNNNNNNGG 1 cut(s) 346
BsnI GGCC 3 cut(s) 45, 357, 628
BsoBI CYCGRG 1 cut(s) 138
Bsp1286I GDGCHC 1 cut(s) 658
Bsp143I GATC 2 cut(s) 384, 518
Bsp19I CCATGG 1 cut(s) 40
BspACI CCGC 3 cut(s) 347, 854, 1032
BspANI GGCC 3 cut(s) 45, 357, 628
BspCNI CTCAG 1 cut(s) 220
BspFNI CGCG 2 cut(s) 347, 1034
BspHI TCATGA 1 cut(s) 277
BspLI GGNNCC 2 cut(s) 504, 520
BspPI GGATC 2 cut(s) 513, 526
BsrDI GCAATG 1 cut(s) 424
BsrI ACTGG 2 cut(s) 190, 417
BssECI CCNNGG 3 cut(s) 40, 138, 340
BssMI GATC 2 cut(s) 384, 518
BssT1I CCWWGG 2 cut(s) 40, 340
Bst2UI CCWGG 1 cut(s) 548
Bst4CI ACNGT 3 cut(s) 372, 896, 996
BstC8I GCNNGC 2 cut(s) 682, 859
BstDEI CTNAG 2 cut(s) 228, 1065
BstDSI CCRYGG 1 cut(s) 40
BstF5I GGATG 1 cut(s) 970
BstFNI CGCG 2 cut(s) 347, 1034
BstHHI GCGC 2 cut(s) 347, 1036
BstKTI GATC 2 cut(s) 387, 521
BstMBI GATC 2 cut(s) 384, 518
BstMWI GCNNNNNNNGC 1 cut(s) 233
BstNI CCWGG 1 cut(s) 548
BstNSI RCATGY 2 cut(s) 71, 861
BstSCI CCNGG 3 cut(s) 137, 138, 546
BstSFI CTRYAG 3 cut(s) 132, 263, 740
BstUI CGCG 2 cut(s) 347, 1034
BstV2I GAAGAC 2 cut(s) 632, 946
BstX2I RGATCY 1 cut(s) 518
BstXI CCANNNNNNTGG 1 cut(s) 41
BstYI RGATCY 1 cut(s) 518
BsuRI GGCC 3 cut(s) 45, 357, 628
BtgI CCRYGG 1 cut(s) 40
BtsCI GGATG 1 cut(s) 970
BtsIMutI CAGTG 1 cut(s) 576
Cac8I GCNNGC 2 cut(s) 682, 859
CaiI CAGNNNCTG 1 cut(s) 748
CciI TCATGA 1 cut(s) 277
CfoI GCGC 2 cut(s) 347, 1036
Cfr13I GGNCC 2 cut(s) 502, 544
Cfr9I CCCGGG 1 cut(s) 138
CsiI ACCWGGT 1 cut(s) 546
Csp6I GTAC 1 cut(s) 178
CviAII CATG 4 cut(s) 41, 68, 278, 858
CviQI GTAC 1 cut(s) 178
DdeI CTNAG 2 cut(s) 228, 1065
DpnI GATC 2 cut(s) 386, 520
DpnII GATC 2 cut(s) 384, 518
EaeI YGGCCR 1 cut(s) 43
Eco130I CCWWGG 2 cut(s) 40, 340
Eco147I AGGCCT 1 cut(s) 357
Eco47I GGWCC 2 cut(s) 502, 544
Eco57I CTGAAG 1 cut(s) 552
Eco88I CYCGRG 1 cut(s) 138
EcoRII CCWGG 1 cut(s) 546
EcoT14I CCWWGG 2 cut(s) 40, 340
ErhI CCWWGG 2 cut(s) 40, 340
FaeI CATG 4 cut(s) 44, 71, 281, 861
FatI CATG 4 cut(s) 40, 67, 277, 857
FauNDI CATATG 2 cut(s) 157, 289
FblI GTMKAC 1 cut(s) 987
Fnu4HI GCNGC 1 cut(s) 855
FokI GGATG 1 cut(s) 957
Fsp4HI GCNGC 1 cut(s) 855
GlaI GCGC 2 cut(s) 346, 1035
GluI GCNGC 1 cut(s) 855
GsuI CTGGAG 2 cut(s) 333, 770
HaeIII GGCC 3 cut(s) 45, 357, 628
HapII CCGG 1 cut(s) 139
HhaI GCGC 2 cut(s) 347, 1036
Hin1II CATG 4 cut(s) 44, 71, 281, 861
Hin6I GCGC 2 cut(s) 345, 1034
HinP1I GCGC 2 cut(s) 345, 1034
HinfI GANTC 5 cut(s) 92, 250, 582, 768, 962
HpaII CCGG 1 cut(s) 139
HphI GGTGA 4 cut(s) 173, 361, 562, 1021
Hpy166II GTNNAC 4 cut(s) 454, 544, 696, 988
Hpy188I TCNGA 4 cut(s) 199, 773, 787, 1047
Hpy188III TCNNGA 5 cut(s) 215, 278, 382, 444, 533
Hpy8I GTNNAC 4 cut(s) 454, 544, 696, 988
HpyAV CCTTC 4 cut(s) 26, 368, 372, 839
HpyCH4III ACNGT 3 cut(s) 372, 896, 996
HpyCH4V TGCA 3 cut(s) 71, 305, 933
HpyF10VI GCNNNNNNNGC 1 cut(s) 233
HpyF3I CTNAG 2 cut(s) 228, 1065
Hsp92II CATG 4 cut(s) 44, 71, 281, 861
HspAI GCGC 2 cut(s) 345, 1034
Kzo9I GATC 2 cut(s) 384, 518
LmnI GCTCC 1 cut(s) 314
LweI GCATC 1 cut(s) 314
MabI ACCWGGT 1 cut(s) 546
MalI GATC 2 cut(s) 386, 520
MboI GATC 2 cut(s) 384, 518
MboII GAAGA 6 cut(s) 418, 434, 612, 632, 766, 946
MflI RGATCY 1 cut(s) 518
MhlI GDGCHC 1 cut(s) 658
MlsI TGGCCA 1 cut(s) 45
MluCI AATT 8 cut(s) 145, 281, 376, 604, 797, 885, 925, 1021
MluNI TGGCCA 1 cut(s) 45
MlyI GAGTC 1 cut(s) 956
MmeI TCCRAC 1 cut(s) 998
MnlI CCTC 9 cut(s) 84, 97, 396, 590, 632, 844, 875, 893, 900
Mox20I TGGCCA 1 cut(s) 45
MscI TGGCCA 1 cut(s) 45
MseI TTAA 5 cut(s) 126, 174, 618, 660, 792
Msp20I TGGCCA 1 cut(s) 45
MspI CCGG 1 cut(s) 139
MspR9I CCNGG 3 cut(s) 139, 140, 548
MvaI CCWGG 1 cut(s) 548
MvnI CGCG 2 cut(s) 347, 1034
MwoI GCNNNNNNNGC 1 cut(s) 233
NciI CCSGG 2 cut(s) 139, 140
NcoI CCATGG 1 cut(s) 40
NdeI CATATG 2 cut(s) 157, 289
NdeII GATC 2 cut(s) 384, 518
NlaIII CATG 4 cut(s) 44, 71, 281, 861
NlaIV GGNNCC 2 cut(s) 504, 520
NspI RCATGY 2 cut(s) 71, 861
PaeI GCATGC 1 cut(s) 861
PagI TCATGA 1 cut(s) 277
PceI AGGCCT 1 cut(s) 357
PfeI GAWTC 4 cut(s) 92, 250, 582, 768
PflFI GACNNNGTC 1 cut(s) 983
PkrI GCNGC 1 cut(s) 856
PleI GAGTC 1 cut(s) 956
PpsI GAGTC 1 cut(s) 956
PsiI TTATAA 2 cut(s) 150, 891
Psp6I CCWGG 1 cut(s) 546
PspGI CCWGG 1 cut(s) 546
PspN4I GGNNCC 2 cut(s) 504, 520
PspPI GGNCC 2 cut(s) 502, 544
PstNI CAGNNNCTG 1 cut(s) 748
PsuI RGATCY 1 cut(s) 518
PsyI GACNNNGTC 1 cut(s) 983
RsaI GTAC 1 cut(s) 179
RsaNI GTAC 1 cut(s) 178
SaqAI TTAA 5 cut(s) 126, 174, 618, 660, 792
SatI GCNGC 1 cut(s) 855
Sau3AI GATC 2 cut(s) 384, 518
Sau96I GGNCC 2 cut(s) 502, 544
SchI GAGTC 1 cut(s) 956
ScrFI CCNGG 3 cut(s) 139, 140, 548
SduI GDGCHC 1 cut(s) 658
SetI ASST 8 cut(s) 76, 170, 319, 451, 549, 624, 679, 750
SexAI ACCWGGT 1 cut(s) 546
SfaNI GCATC 1 cut(s) 314
SfcI CTRYAG 3 cut(s) 132, 263, 740
SinI GGWCC 2 cut(s) 502, 544
SmaI CCCGGG 1 cut(s) 140
SmlI CTYRAG 2 cut(s) 400, 761
SmoI CTYRAG 2 cut(s) 400, 761
SphI GCATGC 1 cut(s) 861
SrfI GCCCGGGC 1 cut(s) 140
Sse9I AATT 8 cut(s) 145, 281, 376, 604, 797, 885, 925, 1021
SseBI AGGCCT 1 cut(s) 357
SsiI CCGC 3 cut(s) 347, 854, 1032
StuI AGGCCT 1 cut(s) 357
StyD4I CCNGG 3 cut(s) 137, 138, 546
StyI CCWWGG 2 cut(s) 40, 340
TaaI ACNGT 3 cut(s) 372, 896, 996
TaqI TCGA 1 cut(s) 495
TasI AATT 8 cut(s) 145, 281, 376, 604, 797, 885, 925, 1021
TauI GCSGC 1 cut(s) 857
TfiI GAWTC 4 cut(s) 92, 250, 582, 768
Tru1I TTAA 5 cut(s) 126, 174, 618, 660, 792
Tru9I TTAA 5 cut(s) 126, 174, 618, 660, 792
TscAI CASTG 1 cut(s) 576
TspDTI ATGAA 5 cut(s) 70, 276, 294, 435, 830
TspGWI ACGGA 2 cut(s) 515, 680
TspMI CCCGGG 1 cut(s) 138
TspRI CASTG 1 cut(s) 576
Tth111I GACNNNGTC 1 cut(s) 983
VpaK11BI GGWCC 2 cut(s) 502, 544
XapI RAATTY 6 cut(s) 281, 376, 604, 797, 885, 1021
XceI RCATGY 2 cut(s) 71, 861
XcmI CCANNNNNNNNNTGG 1 cut(s) 47
XmaI CCCGGG 1 cut(s) 138
XmiI GTMKAC 1 cut(s) 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.