Rorug02G0400200

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Forward (+)
51089367 .. 51095035
5669 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0400200.1

Sequence Viewer

Length: 1611 bp
ATGTTTAGACCAAAACCCACATCAAGATTCATCCTTTTAGCCTTCACCCTTCTCCTACTAGTCAATTTCCCAGCTTCAATCACAGCCTCTGAACCCACCACTTCTGAAAGTGAAGATAATGAATTGGAGGAGTTACTAGCATTAGATGATGAAGTGGAACAAGAAGAAGAAGAGCAAGGAGGGACTCCTAATGTGAGGTCTTCAGAGGCAGAGCTGTTAACCAAAGCCCAGAGGATTGTTCTTGAGCTCAACCATGACAATACCAACAGGGTGATTGACAAGAATGAGTTTGTTCTGGTTCTTGGGTATGCTCCTTGGTGTGCCAGAAGTGCTGAGCTTATGCCTCAATTTGCTGAGGCTGCAACTTCACTCAGTGAATTGGGGAGTCCTCTTGTGATGGCTAAGCTTGATGCAGAGCGGTATCCCAAAACGGCGTCGCTGCTTGAGATCAAAGGGTTCCCTACCCTGCTTCTGTTTGTCAATGGCACCTCTCAAGTGTACACCGGTGGATTTTCTGCGGAAGAAATAGTGATATGGGCAAGGAAGAAGACTGGTGAGCCTGTTATTAGGATAAGCTCGGTGCCAGCGGCAGAAGAATTTCTCAAGAAGCATCATATATTTGTTGTTGGTTTGTTTGAAAATTTTGAGGGGCCAAACTATGAAGAATTTGTAAAAGCAGCAACAGCTGACAATGCAATCCAGTTTGTAGAAGTAAGCGACATCGATGTTGCCAATGTTCTCTTTCCAAATGTAAAACCAGCTAATCTTTTCCTTGGAATTGTGAAATCTGAGGCTGAAAGATACACTGCATATGAAGGGACATTTGAGATGGAGCAAATATTGAAGTTCTTGGACTATAACAAGTTTCCATTAGTTAACAAACTGACTGAATCAAATTCTGCCACAGTTTACTCCAGCCCTCTTAAACTTCAGGTCATTGTCTTTGCAGAAGAAGATGAATTCAAGAAGCTTCTGGAGCCTCTTCAGGATATTGCTCGACAATTCAAGTCAGAGATAATGTTTATATATATAGACATCACAGATGAAAACCTTGCCAAGCCTTATTTAACATTATTTGGGCTTGAAGAAGCAGAGAGCACTGTGGTGGCTGCTTTTGATGTCCGAGTCAACTCTAAATATCTATTAGAGTCAAATCCAACACCAAGCAATATAGAGGAGTTCTGCTCAGGGCTTCTGCATGGCACTTTGTCTCCATACTTCAAATCACAAGCAATACCTAATAACGCCAATGAAACTGTCCATGTCGCTGTTGGAAAGACATTTGATGACTTGATTTTGAATAACCACAAGAATGTTCTACTAGAGGTGTTCACACCATGGTGCATCACATGTGAGACCACTAGCAAGCGCGTCGAGAAGTTGGCTAAGCATTTCAAAAATTTGGATAGTTTATTCTTCGCAAAGATAGATGCTTCTGCAAATGAACATCCAAAACTGAAAGTAGATGACTATCCAACACTCTTATTTTATGCAGCCAATAATAAAGAGAACCCGATCAAGCTTTCTACGAAAACCAGCTTGAAGGACCTGGCCACATCAATCAACAAACATGTGAAAGCAAAAGATGAAGTTGCTAAAGATGAACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

536

Amino Acids

60.11

Weight (kDa)

4.85

Isoelectric Point (pI)

36.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin PF00085 81 - 179 8.9e-15 Thioredoxin
Thioredoxin_6 PF13848 212 - 396 6.4e-17 Thioredoxin-like domain
Thioredoxin PF00085 421 - 521 2e-12 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000193)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53940 AT1G53940 AT1G53970 AT1G53970 AT1G53990 AT3G14225 AT3G14225 AT5G40990
fragaria_vesca FvH4_6g34510 FvH4_6g35571 FvH4_6g35571 FvH4_6g35572 FvH4_6g35580 FvH4_6g35580 FvH4_6g35584 FvH4_6g35600 FvH4_6g35610 FvH4_6g35630 FvH4_6g35631
malus_domestica MD00G1137100.v1.1 MD01G1122400.v1.1 MD07G1191900.v1.1 MD09G1174600.v1.1 MD09G1174700.v1.1 MD09G1175100.v1.1 MD17G1151700.v1.1 MD17G1151800.v1.1
prunus_persica Prupe.3G032700_v2.0.a1 Prupe.3G032900_v2.0.a1 Prupe.3G033100_v2.0.a1 Prupe.3G033200_v2.0.a1 Prupe.3G033300_v2.0.a1 Prupe.3G033400_v2.0.a1 Prupe.3G033500_v2.0.a1 Prupe.3G033600_v2.0.a1
pyrus_communis pycom01g14930 pycom09g09170 pycom09g09180 pycom09g09190 pycom09g09220 pycom17g14510
rosa_chinensis RchiOBHm_Chr2g0147161 RchiOBHm_Chr2g0147301 RchiOBHm_Chr2g0147311 RchiOBHm_Chr2g0147391 RchiOBHm_Chr2g0147431 RchiOBHm_Chr2g0147441 RchiOBHm_Chr2g0147471 RchiOBHm_Chr2g0147491 RchiOBHm_Chr2g0147591 RchiOBHm_Chr2g0147911 RchiOBHm_Chr2g0148061 RchiOBHm_Chr4g0407441 RchiOBHm_Chr4g0407471 RchiOBHm_Chr6g0252881 RchiOBHm_Chr7g0228391 RchiOBHm_Chr7g0228411
rosa_laevigata RLG00000001566 RLG00000020247 RLG00000020250 RLG00000020251 RLG00000020252 RLG00000020255 RLG00000020258 RLG00000020261 RLG00000020262 RLG00000020264 RLG00000020293 RLG00000020307 RLG00000030814
rosa_multiflora Rmu_co8112460.1_g000001 Rmu_co8353483.1_g000001 Rmu_co8492209.1_g000001 Rmu_sc0000308.1_g000061 Rmu_sc0000538.1_g000003 Rmu_sc0001159.1_g000017 Rmu_sc0001159.1_g000023 Rmu_sc0001159.1_g000050 Rmu_sc0001880.1_g000011 Rmu_sc0006302.1_g000003 Rmu_sc0008083.1_g000003 Rmu_sc0010661.1_g000002 Rmu_sc0017091.1_g000001 Rmu_sc0021146.1_g000001
rosa_roxburghii Rroxscaffold_2G00099470 Rroxscaffold_2G00099500 Rroxscaffold_2G00099530 Rroxscaffold_2G00099590 Rroxscaffold_2G00113160 Rroxscaffold_2G00113180 Rroxscaffold_3G00231150 Rroxscaffold_4G00332370 Rroxscaffold_5G00352070
rosa_rugosa Rorug02G0398800 Rorug02G0399100 Rorug02G0399200 Rorug02G0399300 Rorug02G0400100 Rorug02G0400200 Rorug02G0400300.1 Rorug02G0403000 Rorug05G0546600 Rorug05G0547200 Rorug07G0249100 Rorug07G0249200.1 RorugPtG0001700.1
rosa_samantha Rh1CG003800 Rh2AG456000 Rh2AG456200 Rh2AG456400 Rh2AG456500 Rh2AG456900 Rh2AG457200 Rh2AG457500 Rh2AG457600 Rh2AG457700 Rh2AG460000 Rh2AG460400 Rh2BG468900 Rh2BG469000 Rh2BG469800 Rh2BG469900 Rh2BG470000 Rh2BG473300 Rh2BG473800 Rh2CG443400 Rh2CG443800 Rh2CG443900 Rh2CG444400 Rh2CG444600 Rh2CG445000 Rh2CG445100 Rh2CG447300 Rh2CG447600 Rh2DG478200 Rh2DG478300 Rh2DG479300 Rh2DG479500 Rh2DG482200 Rh4AG048300 Rh4CG051600 Rh4CG051700 Rh4CG151200 Rh7AG401800 Rh7CG420700 Rh7DG397900
rosa_wichuraiana Rw2G037300 Rw2G037330 Rw2G037350 Rw2G037360 Rw2G037390 Rw2G037410 Rw2G037620 Rw4G003830 Rw6G005020 Rw6G005580 Rw7G033400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 485, 580
AccBSI CCGCTC 1 cut(s) 418
AccII CGCG 1 cut(s) 1371
AciI CCGC 3 cut(s) 418, 518, 587
AcoI YGGCCR 1 cut(s) 1551
AcsI RAATTY 6 cut(s) 596, 640, 665, 895, 959, 1399
AcuI CTGAAG 3 cut(s) 186, 914, 968
AcyI GRCGYC 1 cut(s) 434
AdeI CACNNNGTG 1 cut(s) 374
AfaI GTAC 1 cut(s) 500
AflIII ACRYGT 2 cut(s) 1349, 1570
AgeI ACCGGT 1 cut(s) 503
AhlI ACTAGT 1 cut(s) 58
AjnI CCWGG 1 cut(s) 1548
AleI CACNNNNGTG 2 cut(s) 1103, 1339
Alw21I GWGCWC 2 cut(s) 249, 1100
Alw26I GTCTC 2 cut(s) 1215, 1349
AlwNI CAGNNNCTG 1 cut(s) 89
AoxI GGCC 2 cut(s) 650, 1551
ApeKI GCWGC 5 cut(s) 359, 439, 677, 1109, 1493
ApoI RAATTY 6 cut(s) 596, 640, 665, 895, 959, 1399
AsiGI ACCGGT 1 cut(s) 503
Asp700I GAANNNNTTC 1 cut(s) 597
AspLEI GCGC 1 cut(s) 1371
AspS9I GGNCC 2 cut(s) 650, 1546
AsuHPI GGTGA 3 cut(s) 37, 283, 566
AvaII GGWCC 1 cut(s) 1546
BalI TGGCCA 1 cut(s) 1553
BanI GGYRCC 2 cut(s) 485, 580
BanII GRGCYC 1 cut(s) 249
BbsI GAAGAC 2 cut(s) 192, 554
Bbv12I GWGCWC 2 cut(s) 249, 1100
BbvCI CCTCAGC 1 cut(s) 354
BbvI GCAGC 5 cut(s) 346, 426, 689, 1096, 1505
BccI CCATC 2 cut(s) 391, 823
BceAI ACGGC 1 cut(s) 447
BcgI CGANNNNNNTGC 2 cut(s) 1354, 1388
BciT130I CCWGG 1 cut(s) 1550
BciVI GTATCC 1 cut(s) 432
BcoDI GTCTC 2 cut(s) 1215, 1349
BcuI ACTAGT 1 cut(s) 58
BfaI CTAG 4 cut(s) 59, 137, 1322, 1362
BfmI CTRYAG 1 cut(s) 1607
BfuI GTATCC 1 cut(s) 432
BisI GCNGC 6 cut(s) 360, 440, 588, 678, 1110, 1494
BlpI GCTNAGC 3 cut(s) 333, 402, 1386
BlsI GCNGC 6 cut(s) 361, 441, 589, 679, 1111, 1495
Bme1390I CCNGG 1 cut(s) 1550
Bme18I GGWCC 1 cut(s) 1546
BmgT120I GGNCC 2 cut(s) 650, 1546
BmiI GGNNCC 5 cut(s) 458, 487, 582, 651, 978
BmrFI CCNGG 1 cut(s) 1550
BmsI GCATC 4 cut(s) 400, 619, 1353, 1420
BpiI GAAGAC 2 cut(s) 192, 554
BplI GAGNNNNNCTC 2 cut(s) 1169, 1201
BpmI CTGGAG 2 cut(s) 898, 995
Bpu10I CCTNAGC 2 cut(s) 354, 1186
Bpu1102I GCTNAGC 3 cut(s) 333, 402, 1386
BpuEI CTTGAG 4 cut(s) 263, 464, 477, 587
Bsa29I ATCGAT 1 cut(s) 723
BsaBI GATNNNNATC 1 cut(s) 1470
BsaHI GRCGYC 1 cut(s) 434
BsaI GGTCTC 1 cut(s) 1349
BsaJI CCNNGG 3 cut(s) 314, 772, 1337
BsaWI WCCGGW 1 cut(s) 503
BsaXI ACNNNNNCTCC 2 cut(s) 1195, 1225
Bse118I RCCGGY 1 cut(s) 503
Bse1I ACTGG 2 cut(s) 556, 700
Bse8I GATNNNNATC 1 cut(s) 1470
BseBI CCWGG 1 cut(s) 1550
BseCI ATCGAT 1 cut(s) 723
BseDI CCNNGG 3 cut(s) 314, 772, 1337
BseGI GGATG 2 cut(s) 30, 1447
BseJI GATNNNNATC 1 cut(s) 1470
BseMII CTCAG 5 cut(s) 324, 345, 385, 780, 1200
BseNI ACTGG 2 cut(s) 556, 700
BseRI GAGGAG 2 cut(s) 143, 1190
BseXI GCAGC 5 cut(s) 346, 426, 689, 1096, 1505
BseYI CCCAGC 1 cut(s) 70
Bsh1236I CGCG 1 cut(s) 1371
BshFI GGCC 2 cut(s) 652, 1553
BshNI GGYRCC 2 cut(s) 485, 580
BshTI ACCGGT 1 cut(s) 503
BshVI ATCGAT 1 cut(s) 723
BsiHKAI GWGCWC 2 cut(s) 249, 1100
BsiSI CCGG 1 cut(s) 504
BslFI GGGAC 2 cut(s) 196, 832
BsmAI GTCTC 2 cut(s) 1215, 1349
BsmFI GGGAC 2 cut(s) 196, 832
BsnI GGCC 2 cut(s) 652, 1553
Bso31I GGTCTC 1 cut(s) 1349
Bsp1286I GDGCHC 2 cut(s) 249, 1100
Bsp1407I TGTACA 1 cut(s) 498
Bsp143I GATC 2 cut(s) 447, 1515
Bsp1720I GCTNAGC 3 cut(s) 333, 402, 1386
Bsp19I CCATGG 1 cut(s) 1337
BspACI CCGC 3 cut(s) 418, 518, 587
BspANI GGCC 2 cut(s) 652, 1553
BspCNI CTCAG 5 cut(s) 325, 346, 384, 781, 1199
BspDI ATCGAT 1 cut(s) 723
BspFNI CGCG 1 cut(s) 1371
BspLI GGNNCC 5 cut(s) 458, 487, 582, 651, 978
BspQI GCTCTTC 1 cut(s) 165
BspT107I GGYRCC 2 cut(s) 485, 580
BspTNI GGTCTC 1 cut(s) 1349
BsrBI CCGCTC 1 cut(s) 418
BsrFI RCCGGY 1 cut(s) 503
BsrGI TGTACA 1 cut(s) 498
BsrI ACTGG 2 cut(s) 556, 700
BssAI RCCGGY 1 cut(s) 503
BssECI CCNNGG 3 cut(s) 314, 772, 1337
BssMI GATC 2 cut(s) 447, 1515
BssNI GRCGYC 1 cut(s) 434
BssT1I CCWWGG 3 cut(s) 314, 772, 1337
Bst2UI CCWGG 1 cut(s) 1550
Bst4CI ACNGT 3 cut(s) 907, 1102, 1258
Bst6I CTCTTC 2 cut(s) 165, 987
BstACI GRCGYC 1 cut(s) 434
BstAUI TGTACA 1 cut(s) 498
BstC8I GCNNGC 2 cut(s) 585, 1367
BstDEI CTNAG 7 cut(s) 333, 354, 371, 402, 789, 1186, 1386
BstDSI CCRYGG 1 cut(s) 1337
BstF5I GGATG 2 cut(s) 30, 1447
BstFNI CGCG 1 cut(s) 1371
BstHHI GCGC 1 cut(s) 1371
BstKTI GATC 2 cut(s) 450, 1518
BstMAI GTCTC 2 cut(s) 1215, 1349
BstMBI GATC 2 cut(s) 447, 1515
BstMWI GCNNNNNNNGC 5 cut(s) 329, 359, 683, 692, 976
BstNI CCWGG 1 cut(s) 1550
BstNSI RCATGY 2 cut(s) 1353, 1574
BstSCI CCNGG 1 cut(s) 1548
BstSFI CTRYAG 1 cut(s) 1607
BstUI CGCG 1 cut(s) 1371
BstV1I GCAGC 5 cut(s) 346, 426, 689, 1096, 1505
BstV2I GAAGAC 2 cut(s) 192, 554
Bsu15I ATCGAT 1 cut(s) 723
BsuI GTATCC 1 cut(s) 432
BsuRI GGCC 2 cut(s) 652, 1553
BsuTUI ATCGAT 1 cut(s) 723
BtgI CCRYGG 1 cut(s) 1337
BtsCI GGATG 2 cut(s) 30, 1447
BtsI GCAGTG 1 cut(s) 804
BtsIMutI CAGTG 3 cut(s) 379, 804, 1098
Cac8I GCNNGC 2 cut(s) 585, 1367
CaiI CAGNNNCTG 1 cut(s) 89
CfoI GCGC 1 cut(s) 1371
Cfr10I RCCGGY 1 cut(s) 503
Cfr13I GGNCC 2 cut(s) 650, 1546
ClaI ATCGAT 1 cut(s) 723
CseI GACGC 2 cut(s) 423, 1360
Csp6I GTAC 1 cut(s) 499
CspAI ACCGGT 1 cut(s) 503
CviAII CATG 6 cut(s) 254, 1199, 1262, 1338, 1350, 1571
CviQI GTAC 1 cut(s) 499
DdeI CTNAG 7 cut(s) 333, 354, 371, 402, 789, 1186, 1386
DpnI GATC 2 cut(s) 449, 1517
DpnII GATC 2 cut(s) 447, 1515
DraIII CACNNNGTG 1 cut(s) 374
EaeI YGGCCR 1 cut(s) 1551
Eam1104I CTCTTC 2 cut(s) 165, 987
EarI CTCTTC 2 cut(s) 165, 987
Ecl136II GAGCTC 1 cut(s) 247
Eco130I CCWWGG 3 cut(s) 314, 772, 1337
Eco24I GRGCYC 1 cut(s) 249
Eco31I GGTCTC 1 cut(s) 1349
Eco47I GGWCC 1 cut(s) 1546
Eco53kI GAGCTC 1 cut(s) 247
Eco57I CTGAAG 3 cut(s) 186, 914, 968
EcoICRI GAGCTC 1 cut(s) 247
EcoO109I RGGNCCY 1 cut(s) 1546
EcoRI GAATTC 1 cut(s) 959
EcoRII CCWGG 1 cut(s) 1548
EcoT14I CCWWGG 3 cut(s) 314, 772, 1337
EcoT38I GRGCYC 1 cut(s) 249
ErhI CCWWGG 3 cut(s) 314, 772, 1337
FaeI CATG 6 cut(s) 257, 1202, 1265, 1341, 1353, 1574
FaqI GGGAC 2 cut(s) 196, 832
FatI CATG 6 cut(s) 253, 1198, 1261, 1337, 1349, 1570
FauNDI CATATG 1 cut(s) 811
Fnu4HI GCNGC 6 cut(s) 360, 440, 588, 678, 1110, 1494
FokI GGATG 2 cut(s) 17, 1434
FriOI GRGCYC 1 cut(s) 249
Fsp4HI GCNGC 6 cut(s) 360, 440, 588, 678, 1110, 1494
FspBI CTAG 4 cut(s) 59, 137, 1322, 1362
GlaI GCGC 1 cut(s) 1370
GluI GCNGC 6 cut(s) 360, 440, 588, 678, 1110, 1494
GsaI CCCAGC 1 cut(s) 74
GsuI CTGGAG 2 cut(s) 898, 995
HaeIII GGCC 2 cut(s) 652, 1553
HapII CCGG 1 cut(s) 504
HgaI GACGC 2 cut(s) 423, 1360
HhaI GCGC 1 cut(s) 1371
Hin1I GRCGYC 1 cut(s) 434
Hin1II CATG 6 cut(s) 257, 1202, 1265, 1341, 1353, 1574
Hin6I GCGC 1 cut(s) 1369
HinP1I GCGC 1 cut(s) 1369
HincII GTYRAC 3 cut(s) 219, 877, 1129
HindII GTYRAC 3 cut(s) 219, 877, 1129
HindIII AAGCTT 3 cut(s) 404, 968, 1520
HinfI GANTC 6 cut(s) 27, 184, 385, 890, 1125, 1148
HpaI GTTAAC 2 cut(s) 219, 877
HpaII CCGG 1 cut(s) 504
HphI GGTGA 3 cut(s) 37, 283, 566
Hpy166II GTNNAC 7 cut(s) 219, 499, 501, 877, 910, 1129, 1332
Hpy188I TCNGA 6 cut(s) 91, 106, 205, 790, 1012, 1124
Hpy188III TCNNGA 7 cut(s) 24, 242, 604, 964, 974, 986, 1375
Hpy8I GTNNAC 7 cut(s) 219, 499, 501, 877, 910, 1129, 1332
Hpy99I CGWCG 2 cut(s) 439, 1376
HpyAV CCTTC 4 cut(s) 52, 59, 809, 1537
HpyCH4III ACNGT 3 cut(s) 907, 1102, 1258
HpyCH4V TGCA 9 cut(s) 362, 413, 695, 809, 947, 1198, 1344, 1439, 1493
HpyF10VI GCNNNNNNNGC 5 cut(s) 329, 359, 683, 692, 976
HpyF3I CTNAG 7 cut(s) 333, 354, 371, 402, 789, 1186, 1386
Hsp92I GRCGYC 1 cut(s) 434
Hsp92II CATG 6 cut(s) 257, 1202, 1265, 1341, 1353, 1574
HspAI GCGC 1 cut(s) 1369
KspAI GTTAAC 2 cut(s) 219, 877
Kzo9I GATC 2 cut(s) 447, 1515
LguI GCTCTTC 1 cut(s) 165
LmnI GCTCC 3 cut(s) 316, 832, 976
Lsp1109I GCAGC 5 cut(s) 346, 426, 689, 1096, 1505
LweI GCATC 4 cut(s) 400, 619, 1353, 1420
MaeI CTAG 4 cut(s) 59, 137, 1322, 1362
MaeIII GTNAC 1 cut(s) 132
MalI GATC 2 cut(s) 449, 1517
MbiI CCGCTC 1 cut(s) 418
MboI GATC 2 cut(s) 447, 1515
MhlI GDGCHC 2 cut(s) 249, 1100
MlsI TGGCCA 1 cut(s) 1553
MluNI TGGCCA 1 cut(s) 1553
MlyI GAGTC 4 cut(s) 178, 394, 1134, 1157
MmeI TCCRAC 3 cut(s) 1181, 1252, 1499
Mox20I TGGCCA 1 cut(s) 1553
MroXI GAANNNNTTC 1 cut(s) 597
MscI TGGCCA 1 cut(s) 1553
MseI TTAA 4 cut(s) 218, 876, 924, 1067
MslI CAYNNNNRTG 3 cut(s) 1103, 1311, 1339
Msp20I TGGCCA 1 cut(s) 1553
MspA1I CMGCKG 2 cut(s) 587, 686
MspI CCGG 1 cut(s) 504
MspR9I CCNGG 1 cut(s) 1550
MvaI CCWGG 1 cut(s) 1550
MvnI CGCG 1 cut(s) 1371
MwoI GCNNNNNNNGC 5 cut(s) 329, 359, 683, 692, 976
NcoI CCATGG 1 cut(s) 1337
NdeI CATATG 1 cut(s) 811
NdeII GATC 2 cut(s) 447, 1515
NlaIII CATG 6 cut(s) 257, 1202, 1265, 1341, 1353, 1574
NlaIV GGNNCC 5 cut(s) 458, 487, 582, 651, 978
NspI RCATGY 2 cut(s) 1353, 1574
OliI CACNNNNGTG 2 cut(s) 1103, 1339
PciI ACATGT 2 cut(s) 1349, 1570
PciSI GCTCTTC 1 cut(s) 165
PdmI GAANNNNTTC 1 cut(s) 597
PfeI GAWTC 2 cut(s) 27, 890
PinAI ACCGGT 1 cut(s) 503
PkrI GCNGC 6 cut(s) 361, 441, 589, 679, 1111, 1495
PleI GAGTC 4 cut(s) 178, 393, 1133, 1156
PpsI GAGTC 4 cut(s) 178, 393, 1133, 1156
PpuMI RGGWCCY 1 cut(s) 1546
PscI ACATGT 2 cut(s) 1349, 1570
Psp124BI GAGCTC 1 cut(s) 249
Psp5II RGGWCCY 1 cut(s) 1546
Psp6I CCWGG 1 cut(s) 1548
PspFI CCCAGC 1 cut(s) 70
PspGI CCWGG 1 cut(s) 1548
PspN4I GGNNCC 5 cut(s) 458, 487, 582, 651, 978
PspPI GGNCC 2 cut(s) 650, 1546
PspPPI RGGWCCY 1 cut(s) 1546
PstNI CAGNNNCTG 1 cut(s) 89
PvuII CAGCTG 1 cut(s) 686
RsaI GTAC 1 cut(s) 500
RsaNI GTAC 1 cut(s) 499
RseI CAYNNNNRTG 3 cut(s) 1103, 1311, 1339
SacI GAGCTC 1 cut(s) 249
SapI GCTCTTC 1 cut(s) 165
SaqAI TTAA 4 cut(s) 218, 876, 924, 1067
SatI GCNGC 6 cut(s) 360, 440, 588, 678, 1110, 1494
Sau3AI GATC 2 cut(s) 447, 1515
Sau96I GGNCC 2 cut(s) 650, 1546
SchI GAGTC 4 cut(s) 178, 394, 1134, 1157
ScrFI CCNGG 1 cut(s) 1550
SduI GDGCHC 2 cut(s) 249, 1100
SfaNI GCATC 4 cut(s) 400, 619, 1353, 1420
SfcI CTRYAG 1 cut(s) 1607
SgrAI CRCCGGYG 1 cut(s) 503
SinI GGWCC 1 cut(s) 1546
SmiMI CAYNNNNRTG 3 cut(s) 1103, 1311, 1339
SmlI CTYRAG 4 cut(s) 242, 443, 492, 602
SmoI CTYRAG 4 cut(s) 242, 443, 492, 602
SpeI ACTAGT 1 cut(s) 58
SsiI CCGC 3 cut(s) 418, 518, 587
SspI AATATT 1 cut(s) 840
SspMI CTAG 4 cut(s) 59, 137, 1322, 1362
SstI GAGCTC 1 cut(s) 249
StyD4I CCNGG 1 cut(s) 1548
StyI CCWWGG 3 cut(s) 314, 772, 1337
TaaI ACNGT 3 cut(s) 907, 1102, 1258
TaqI TCGA 3 cut(s) 723, 997, 1374
TatI WGTACW 1 cut(s) 498
TauI GCSGC 1 cut(s) 590
TfiI GAWTC 2 cut(s) 27, 890
Tru1I TTAA 4 cut(s) 218, 876, 924, 1067
Tru9I TTAA 4 cut(s) 218, 876, 924, 1067
TscAI CASTG 3 cut(s) 379, 811, 1105
TseI GCWGC 5 cut(s) 359, 439, 677, 1109, 1493
TspRI CASTG 3 cut(s) 379, 811, 1105
VpaK11BI GGWCC 1 cut(s) 1546
XapI RAATTY 6 cut(s) 596, 640, 665, 895, 959, 1399
XceI RCATGY 2 cut(s) 1353, 1574
XcmI CCANNNNNNNNNTGG 1 cut(s) 1268
XmnI GAANNNNTTC 1 cut(s) 597
XspI CTAG 4 cut(s) 59, 137, 1322, 1362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.