Rorug07G0249100

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
Physical Location & Seq
Reverse (-)
23066957 .. 23068777
1821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0249100.1

Sequence Viewer

Length: 1821 bp
ATGAGAGTTGGTAAATCCAAAACAGCAAAGTTTGCTTATATCAAAGACAAGTTGTCCAAGAAGTTGATTAATTGGAAGTCCAAGATTCTTAGTTGTGCTGGCAAGGAGATACTAATCAAGGCAGTTGCTCAAACAATGCCCCTATATGCCATGAATTGCTACCTGCTGCCTAAAAGTCTTTGTGATGATATACATCAACTATGTGCTTCATTTTTTTGGGGTGACACAGAGGAGAAAAAGAAAATCCATTGGAGAAGTTGGGAGAGACTATGTTTAACCAAGCATGAGGGAGGTATGGGCTTTAAAAACATTTATGCTTACAACATTGCAATGCTGGCTAAACAGGGGTGGAGGATTCTCTCCAATCCTCACTCTCTAATTGCTCAGTTGTACAAGGCTAGGTACTTTCCACAATGTTCATTCTGGGAGGCTGAACTGGGTGATTCTCCTTCGTTCTCCTGGAGGAGTATACTCCAAGGTAGGGCAGTGCTTAAGGCGGGTGTCCAATGGAAAATTGGGGATGGTGAACAGGTTGATATTTGGTGTGATCGATGGATTCCTGTACATGCTTCGTATCAAGCCACTAGACCCCAAAACACTTCTTTTAACAAAGTTGCTGATCTTATTGATGCTCCAAACCGGCAATGGAAAACGGGGGAAGTGCATAGTCTCTTTCCAAATGATATAGCCTCTCGTATTCTCTGTATTCCTTTGAGCAGAAATCATAGTCCGGATAGGTTAATTTGGAGTCCGGAAAAGAGAGGACATTACTCTGTCAAGTCGGCAAATTGGATTGCAAGGGTCGAAGTCATGCAAAATACTCTCACGTCTACCTCCAATGGTGATCCATACAAAGAACTTTGGCGATGTTTATGGAAGGCCAAAGTACCTGGAAAGGTAAGCATATGTGTGTGGAGAGCGTGCAACAACCTACTCCCCACAAGAGAGAGATTACTTACTAAAGGTTATAGTGGAGACAACAGATGTATACTCTGTAACCACCAGATCGAAGATGTGGCACATCTTTTCTGTCTGTGTCAAACAGCTTCAACTATTCTTTCAGGTCCACCATTTCATTTACAAGCTACCCTACTGCCATCGATCAACTTTAAGGATTGGATGTTGGAACGGGCATTAACTCTAAGCTCAGATCTTTTTGCACGTTTAATGATGATAATATGGGCCCTTTGGAAGAACAGGAACAATGTGCTCTGGGCAGGAACCAGGCAGACAGCTCAAGATATCATATTAAGCAGTTTTGCATGGTGTGATGAGTATCAGAGAGCTCGAGGTACTGTGAAGCAGCCTCACAAACAACCAAGAACAAGATGGAAGCCTGCTGAAGATGGGGCCTTCAAACTGAATGTGGATGCAGCCTTCTTACCTCAACAAACCACAGGTGGAATAGGGGGAGTGTTAAGGGATGCCTCAGGAAATTTTGTTGCAGCTTTTGCAAGACCAGTTCAACATGCTGCATCTCCTAAGCAATGTGAACTTTTAGCCATTAGAGCAGGAGTAGATTTTCTGGTTTCCCTCCAAGTGCAGCAGGCTGTCATCGAGAGTGATAGTACGGTGGCTATTGCTGAAGCTCTCAGCCCAGATCACAACATGTTAGCTAATGGAGGTTTAATAGATGATATACAATGTGCCATGCAATGCATCCCCAACATTCGCATTTGCTATCAACCCCGATCTAGTAATTTGGTAGCACATAGATTGGCGGGAATAGGTTTTGAGGCAAACCACAACTCTGTATGGTTGGGACTAGTCCCTGAATGTATTCGTGATGTTCTCAGTCACGATCTCCAGTACCTCACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

606

Amino Acids

68.54

Weight (kDa)

9.2

Isoelectric Point (pI)

42.76

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RVT PF13966 280 - 351 2.7e-16 zinc-binding in reverse transcriptase
RVT_3 PF13456 455 - 574 8.9e-18 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000193)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53940 AT1G53940 AT1G53970 AT1G53970 AT1G53990 AT3G14225 AT3G14225 AT5G40990
fragaria_vesca FvH4_6g34510 FvH4_6g35571 FvH4_6g35571 FvH4_6g35572 FvH4_6g35580 FvH4_6g35580 FvH4_6g35584 FvH4_6g35600 FvH4_6g35610 FvH4_6g35630 FvH4_6g35631
malus_domestica MD00G1137100.v1.1 MD01G1122400.v1.1 MD07G1191900.v1.1 MD09G1174600.v1.1 MD09G1174700.v1.1 MD09G1175100.v1.1 MD17G1151700.v1.1 MD17G1151800.v1.1
prunus_persica Prupe.3G032700_v2.0.a1 Prupe.3G032900_v2.0.a1 Prupe.3G033100_v2.0.a1 Prupe.3G033200_v2.0.a1 Prupe.3G033300_v2.0.a1 Prupe.3G033400_v2.0.a1 Prupe.3G033500_v2.0.a1 Prupe.3G033600_v2.0.a1
pyrus_communis pycom01g14930 pycom09g09170 pycom09g09180 pycom09g09190 pycom09g09220 pycom17g14510
rosa_chinensis RchiOBHm_Chr2g0147161 RchiOBHm_Chr2g0147301 RchiOBHm_Chr2g0147311 RchiOBHm_Chr2g0147391 RchiOBHm_Chr2g0147431 RchiOBHm_Chr2g0147441 RchiOBHm_Chr2g0147471 RchiOBHm_Chr2g0147491 RchiOBHm_Chr2g0147591 RchiOBHm_Chr2g0147911 RchiOBHm_Chr2g0148061 RchiOBHm_Chr4g0407441 RchiOBHm_Chr4g0407471 RchiOBHm_Chr6g0252881 RchiOBHm_Chr7g0228391 RchiOBHm_Chr7g0228411
rosa_laevigata RLG00000001566 RLG00000020247 RLG00000020250 RLG00000020251 RLG00000020252 RLG00000020255 RLG00000020258 RLG00000020261 RLG00000020262 RLG00000020264 RLG00000020293 RLG00000020307 RLG00000030814
rosa_multiflora Rmu_co8112460.1_g000001 Rmu_co8353483.1_g000001 Rmu_co8492209.1_g000001 Rmu_sc0000308.1_g000061 Rmu_sc0000538.1_g000003 Rmu_sc0001159.1_g000017 Rmu_sc0001159.1_g000023 Rmu_sc0001159.1_g000050 Rmu_sc0001880.1_g000011 Rmu_sc0006302.1_g000003 Rmu_sc0008083.1_g000003 Rmu_sc0010661.1_g000002 Rmu_sc0017091.1_g000001 Rmu_sc0021146.1_g000001
rosa_roxburghii Rroxscaffold_2G00099470 Rroxscaffold_2G00099500 Rroxscaffold_2G00099530 Rroxscaffold_2G00099590 Rroxscaffold_2G00113160 Rroxscaffold_2G00113180 Rroxscaffold_3G00231150 Rroxscaffold_4G00332370 Rroxscaffold_5G00352070
rosa_rugosa Rorug02G0398800 Rorug02G0399100 Rorug02G0399200 Rorug02G0399300 Rorug02G0400100 Rorug02G0400200 Rorug02G0400300.1 Rorug02G0403000 Rorug05G0546600 Rorug05G0547200 Rorug07G0249100 Rorug07G0249200.1 RorugPtG0001700.1
rosa_samantha Rh1CG003800 Rh2AG456000 Rh2AG456200 Rh2AG456400 Rh2AG456500 Rh2AG456900 Rh2AG457200 Rh2AG457500 Rh2AG457600 Rh2AG457700 Rh2AG460000 Rh2AG460400 Rh2BG468900 Rh2BG469000 Rh2BG469800 Rh2BG469900 Rh2BG470000 Rh2BG473300 Rh2BG473800 Rh2CG443400 Rh2CG443800 Rh2CG443900 Rh2CG444400 Rh2CG444600 Rh2CG445000 Rh2CG445100 Rh2CG447300 Rh2CG447600 Rh2DG478200 Rh2DG478300 Rh2DG479300 Rh2DG479500 Rh2DG482200 Rh4AG048300 Rh4CG051600 Rh4CG051700 Rh4CG151200 Rh7AG401800 Rh7CG420700 Rh7DG397900
rosa_wichuraiana Rw2G037300 Rw2G037330 Rw2G037350 Rw2G037360 Rw2G037390 Rw2G037410 Rw2G037620 Rw4G003830 Rw6G005020 Rw6G005580 Rw7G033400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 171
AccI GTMKAC 3 cut(s) 469, 830, 988
AccIII TCCGGA 2 cut(s) 730, 751
AciI CCGC 2 cut(s) 497, 1721
AclWI GGATC 1 cut(s) 839
AcsI RAATTY 1 cut(s) 1435
AcuI CTGAAG 2 cut(s) 1362, 1605
AfaI GTAC 7 cut(s) 392, 404, 564, 888, 1294, 1570, 1811
AfiI CCNNNNNNNGG 1 cut(s) 481
AflII CTTAAG 1 cut(s) 491
AflIII ACRYGT 1 cut(s) 1608
AgsI TTSAA 3 cut(s) 1050, 1357, 1466
AhdI GACNNNNNGTC 1 cut(s) 52
AhlI ACTAGT 1 cut(s) 1765
AjiI CACGTC 1 cut(s) 828
AjnI CCWGG 3 cut(s) 458, 889, 1223
AluBI AGCT 8 cut(s) 1046, 1085, 1146, 1235, 1286, 1448, 1589, 1616
AluI AGCT 8 cut(s) 1046, 1085, 1146, 1235, 1286, 1448, 1589, 1616
Alw21I GWGCWC 2 cut(s) 1212, 1288
Alw26I GTCTC 3 cut(s) 259, 674, 969
AlwI GGATC 1 cut(s) 839
Ama87I CYCGRG 1 cut(s) 1287
Aor13HI TCCGGA 2 cut(s) 730, 751
AoxI GGCC 3 cut(s) 879, 1182, 1350
ApaI GGGCCC 1 cut(s) 1186
ApeKI GCWGC 6 cut(s) 166, 1303, 1373, 1445, 1472, 1543
ApoI RAATTY 1 cut(s) 1435
AseI ATTAAT 1 cut(s) 69
Asp700I GAANNNNTTC 1 cut(s) 1779
AspS9I GGNCC 4 cut(s) 1064, 1182, 1183, 1350
AsuHPI GGTGA 4 cut(s) 233, 452, 536, 854
AvaI CYCGRG 1 cut(s) 1287
AvaII GGWCC 1 cut(s) 1064
AxyI CCTNAGG 1 cut(s) 1429
BaeGI GKGCMC 1 cut(s) 1186
BanII GRGCYC 2 cut(s) 1186, 1288
Bbv12I GWGCWC 2 cut(s) 1212, 1288
BbvI GCAGC 6 cut(s) 153, 1315, 1385, 1457, 1459, 1555
BccI CCATC 5 cut(s) 515, 546, 1105, 1323, 1340
BciT130I CCWGG 3 cut(s) 460, 891, 1225
BcoDI GTCTC 3 cut(s) 259, 674, 969
BcuI ACTAGT 1 cut(s) 1765
BfaI CTAG 4 cut(s) 399, 585, 1695, 1766
BfrI CTTAAG 1 cut(s) 491
BfuAI ACCTGC 1 cut(s) 171
BglII AGATCT 1 cut(s) 1150
BisI GCNGC 6 cut(s) 167, 1304, 1374, 1446, 1473, 1544
BlsI GCNGC 6 cut(s) 168, 1305, 1375, 1447, 1474, 1545
Bme1390I CCNGG 3 cut(s) 460, 891, 1225
Bme18I GGWCC 1 cut(s) 1064
BmeRI GACNNNNNGTC 1 cut(s) 52
BmeT110I CYCGRG 1 cut(s) 1287
BmgBI CACGTC 1 cut(s) 828
BmgT120I GGNCC 4 cut(s) 1064, 1182, 1183, 1350
BmiI GGNNCC 3 cut(s) 1184, 1222, 1351
BmrFI CCNGG 3 cut(s) 460, 891, 1225
BmrI ACTGGG 1 cut(s) 446
BmsI GCATC 5 cut(s) 619, 1360, 1414, 1484, 1668
BmuI ACTGGG 1 cut(s) 446
BpmI CTGGAG 2 cut(s) 481, 1790
Bpu10I CCTNAGC 1 cut(s) 1482
BpuEI CTTGAG 1 cut(s) 1221
Bsa29I ATCGAT 2 cut(s) 550, 1100
BsaBI GATNNNNATC 3 cut(s) 113, 192, 1275
BsaJI CCNNGG 1 cut(s) 475
BsaWI WCCGGW 2 cut(s) 730, 751
Bsc4I CCNNNNNNNGG 1 cut(s) 481
Bse118I RCCGGY 1 cut(s) 639
Bse1I ACTGG 3 cut(s) 441, 1460, 1807
Bse21I CCTNAGG 1 cut(s) 1429
Bse3DI GCAATG 5 cut(s) 324, 336, 650, 1493, 1661
Bse8I GATNNNNATC 3 cut(s) 113, 192, 1275
BseAI TCCGGA 2 cut(s) 730, 751
BseBI CCWGG 3 cut(s) 460, 891, 1225
BseCI ATCGAT 2 cut(s) 550, 1100
BseDI CCNNGG 1 cut(s) 475
BseGI GGATG 5 cut(s) 526, 1125, 1375, 1429, 1659
BseJI GATNNNNATC 3 cut(s) 113, 192, 1275
BseLI CCNNNNNNNGG 1 cut(s) 481
BseMI GCAATG 5 cut(s) 324, 336, 650, 1493, 1661
BseMII CTCAG 5 cut(s) 398, 1161, 1443, 1606, 1807
BseNI ACTGG 3 cut(s) 441, 1460, 1807
BseRI GAGGAG 2 cut(s) 245, 478
BseSI GKGCMC 1 cut(s) 1186
BseXI GCAGC 6 cut(s) 153, 1315, 1385, 1457, 1459, 1555
BsgI GTGCAG 1 cut(s) 1562
BshFI GGCC 3 cut(s) 881, 1184, 1352
BshVI ATCGAT 2 cut(s) 550, 1100
BsiHKAI GWGCWC 2 cut(s) 1212, 1288
BsiHKCI CYCGRG 1 cut(s) 1287
BsiSI CCGG 3 cut(s) 640, 731, 752
BslFI GGGAC 2 cut(s) 1754, 1776
BslI CCNNNNNNNGG 1 cut(s) 481
BsmAI GTCTC 3 cut(s) 259, 674, 969
BsmFI GGGAC 2 cut(s) 1754, 1776
BsnI GGCC 3 cut(s) 881, 1184, 1352
BsoBI CYCGRG 1 cut(s) 1287
Bsp120I GGGCCC 1 cut(s) 1182
Bsp1286I GDGCHC 3 cut(s) 1186, 1212, 1288
Bsp13I TCCGGA 2 cut(s) 730, 751
Bsp1407I TGTACA 2 cut(s) 390, 562
Bsp143I GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
BspACI CCGC 2 cut(s) 497, 1721
BspANI GGCC 3 cut(s) 881, 1184, 1352
BspCNI CTCAG 5 cut(s) 397, 1160, 1442, 1605, 1806
BspDI ATCGAT 2 cut(s) 550, 1100
BspEI TCCGGA 2 cut(s) 730, 751
BspLI GGNNCC 3 cut(s) 1184, 1222, 1351
BspMI ACCTGC 1 cut(s) 171
BspPI GGATC 1 cut(s) 839
BspTI CTTAAG 1 cut(s) 491
BsrDI GCAATG 5 cut(s) 324, 336, 650, 1493, 1661
BsrFI RCCGGY 1 cut(s) 639
BsrGI TGTACA 2 cut(s) 390, 562
BsrI ACTGG 3 cut(s) 441, 1460, 1807
BssAI RCCGGY 1 cut(s) 639
BssECI CCNNGG 1 cut(s) 475
BssMI GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
BssNAI GTATAC 2 cut(s) 470, 989
BssT1I CCWWGG 1 cut(s) 475
Bst1107I GTATAC 2 cut(s) 470, 989
Bst2UI CCWGG 3 cut(s) 460, 891, 1225
Bst4CI ACNGT 2 cut(s) 1297, 1573
BstAFI CTTAAG 1 cut(s) 491
BstAPI GCANNNNNTGC 2 cut(s) 32, 1451
BstAUI TGTACA 2 cut(s) 390, 562
BstC8I GCNNGC 5 cut(s) 100, 336, 922, 1338, 1548
BstDEI CTNAG 8 cut(s) 89, 384, 1142, 1147, 1429, 1482, 1592, 1793
BstF5I GGATG 5 cut(s) 526, 1125, 1375, 1429, 1659
BstKTI GATC 9 cut(s) 550, 622, 847, 1008, 1104, 1153, 1603, 1694, 1804
BstMAI GTCTC 3 cut(s) 259, 674, 969
BstMBI GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
BstMWI GCNNNNNNNGC 4 cut(s) 32, 335, 1451, 1508
BstNI CCWGG 3 cut(s) 460, 891, 1225
BstNSI RCATGY 3 cut(s) 569, 1472, 1612
BstSCI CCNGG 3 cut(s) 458, 889, 1223
BstSLI GKGCMC 1 cut(s) 1186
BstV1I GCAGC 6 cut(s) 153, 1315, 1385, 1457, 1459, 1555
BstX2I RGATCY 1 cut(s) 1150
BstYI RGATCY 1 cut(s) 1150
BstZ17I GTATAC 2 cut(s) 470, 989
Bsu15I ATCGAT 2 cut(s) 550, 1100
Bsu36I CCTNAGG 1 cut(s) 1429
BsuRI GGCC 3 cut(s) 881, 1184, 1352
BsuTUI ATCGAT 2 cut(s) 550, 1100
BtgZI GCGATG 1 cut(s) 880
BtrI CACGTC 1 cut(s) 828
BtsCI GGATG 5 cut(s) 526, 1125, 1375, 1429, 1659
BtsI GCAGTG 1 cut(s) 492
BtsIMutI CAGTG 1 cut(s) 492
BveI ACCTGC 1 cut(s) 171
Cac8I GCNNGC 5 cut(s) 100, 336, 922, 1338, 1548
Cfr10I RCCGGY 1 cut(s) 639
Cfr13I GGNCC 4 cut(s) 1064, 1182, 1183, 1350
ClaI ATCGAT 2 cut(s) 550, 1100
Csp6I GTAC 7 cut(s) 391, 403, 563, 887, 1293, 1569, 1810
CviAII CATG 8 cut(s) 151, 284, 566, 811, 1263, 1469, 1609, 1651
CviQI GTAC 7 cut(s) 391, 403, 563, 887, 1293, 1569, 1810
DdeI CTNAG 8 cut(s) 89, 384, 1142, 1147, 1429, 1482, 1592, 1793
DpnI GATC 9 cut(s) 549, 621, 846, 1007, 1103, 1152, 1602, 1693, 1803
DpnII GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
DraI TTTAAA 1 cut(s) 304
DriI GACNNNNNGTC 1 cut(s) 52
Eam1105I GACNNNNNGTC 1 cut(s) 52
Ecl136II GAGCTC 1 cut(s) 1286
Eco130I CCWWGG 1 cut(s) 475
Eco24I GRGCYC 2 cut(s) 1186, 1288
Eco32I GATATC 1 cut(s) 1243
Eco47I GGWCC 1 cut(s) 1064
Eco53kI GAGCTC 1 cut(s) 1286
Eco57I CTGAAG 2 cut(s) 1362, 1605
Eco81I CCTNAGG 1 cut(s) 1429
Eco88I CYCGRG 1 cut(s) 1287
EcoICRI GAGCTC 1 cut(s) 1286
EcoO109I RGGNCCY 2 cut(s) 1183, 1350
EcoRII CCWGG 3 cut(s) 458, 889, 1223
EcoRV GATATC 1 cut(s) 1243
EcoT14I CCWWGG 1 cut(s) 475
EcoT22I ATGCAT 1 cut(s) 1661
EcoT38I GRGCYC 2 cut(s) 1186, 1288
ErhI CCWWGG 1 cut(s) 475
FaeI CATG 8 cut(s) 154, 287, 569, 814, 1266, 1472, 1612, 1654
FaqI GGGAC 2 cut(s) 1754, 1776
FatI CATG 8 cut(s) 150, 283, 565, 810, 1262, 1468, 1608, 1650
FauI CCCGC 2 cut(s) 490, 1714
FauNDI CATATG 1 cut(s) 905
FblI GTMKAC 3 cut(s) 469, 830, 988
Fnu4HI GCNGC 6 cut(s) 167, 1304, 1374, 1446, 1473, 1544
FokI GGATG 5 cut(s) 533, 1132, 1382, 1436, 1646
FriOI GRGCYC 2 cut(s) 1186, 1288
Fsp4HI GCNGC 6 cut(s) 167, 1304, 1374, 1446, 1473, 1544
FspBI CTAG 4 cut(s) 399, 585, 1695, 1766
GluI GCNGC 6 cut(s) 167, 1304, 1374, 1446, 1473, 1544
GsuI CTGGAG 2 cut(s) 481, 1790
HaeIII GGCC 3 cut(s) 881, 1184, 1352
HapII CCGG 3 cut(s) 640, 731, 752
Hin1II CATG 8 cut(s) 154, 287, 569, 814, 1266, 1472, 1612, 1654
HinfI GANTC 5 cut(s) 85, 355, 443, 556, 748
HpaII CCGG 3 cut(s) 640, 731, 752
HphI GGTGA 4 cut(s) 233, 452, 536, 854
Hpy166II GTNNAC 6 cut(s) 470, 527, 831, 989, 1067, 1493
Hpy188I TCNGA 2 cut(s) 1150, 1281
Hpy188III TCNNGA 7 cut(s) 731, 752, 1238, 1431, 1558, 1784, 1799
Hpy8I GTNNAC 6 cut(s) 470, 527, 831, 989, 1067, 1493
HpyAV CCTTC 4 cut(s) 459, 871, 1363, 1387
HpyCH4III ACNGT 2 cut(s) 1297, 1573
HpyCH4IV ACGT 2 cut(s) 827, 1162
HpyF10VI GCNNNNNNNGC 4 cut(s) 32, 335, 1451, 1508
HpyF3I CTNAG 8 cut(s) 89, 384, 1142, 1147, 1429, 1482, 1592, 1793
HpySE526I ACGT 2 cut(s) 827, 1162
Hsp92II CATG 8 cut(s) 154, 287, 569, 814, 1266, 1472, 1612, 1654
Kpn2I TCCGGA 2 cut(s) 730, 751
Kzo9I GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
LmnI GCTCC 1 cut(s) 637
Lsp1109I GCAGC 6 cut(s) 153, 1315, 1385, 1457, 1459, 1555
LweI GCATC 5 cut(s) 619, 1360, 1414, 1484, 1668
MaeI CTAG 4 cut(s) 399, 585, 1695, 1766
MaeII ACGT 2 cut(s) 827, 1162
MaeIII GTNAC 3 cut(s) 221, 995, 1796
MalI GATC 9 cut(s) 549, 621, 846, 1007, 1103, 1152, 1602, 1693, 1803
MboI GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
MboII GAAGA 3 cut(s) 1022, 1204, 1355
MflI RGATCY 1 cut(s) 1150
MhlI GDGCHC 3 cut(s) 1186, 1212, 1288
MluCI AATT 8 cut(s) 70, 154, 378, 513, 741, 787, 1435, 1699
MlyI GAGTC 1 cut(s) 757
MmeI TCCRAC 1 cut(s) 1104
Mph1103I ATGCAT 1 cut(s) 1661
MroI TCCGGA 2 cut(s) 730, 751
MroXI GAANNNNTTC 1 cut(s) 1779
MslI CAYNNNNRTG 2 cut(s) 329, 908
MspCI CTTAAG 1 cut(s) 491
MspI CCGG 3 cut(s) 640, 731, 752
MspR9I CCNGG 3 cut(s) 460, 891, 1225
MvaI CCWGG 3 cut(s) 460, 891, 1225
MwoI GCNNNNNNNGC 4 cut(s) 32, 335, 1451, 1508
NdeI CATATG 1 cut(s) 905
NdeII GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
NlaIII CATG 8 cut(s) 154, 287, 569, 814, 1266, 1472, 1612, 1654
NlaIV GGNNCC 3 cut(s) 1184, 1222, 1351
NmuCI GTSAC 2 cut(s) 221, 1796
NsiI ATGCAT 1 cut(s) 1661
NspI RCATGY 3 cut(s) 569, 1472, 1612
PaeR7I CTCGAG 1 cut(s) 1287
PciI ACATGT 1 cut(s) 1608
PdmI GAANNNNTTC 1 cut(s) 1779
PfeI GAWTC 4 cut(s) 85, 355, 443, 556
PfoI TCCNGGA 1 cut(s) 458
PkrI GCNGC 6 cut(s) 168, 1305, 1375, 1447, 1474, 1545
PleI GAGTC 1 cut(s) 756
PpsI GAGTC 1 cut(s) 756
PscI ACATGT 1 cut(s) 1608
PshBI ATTAAT 1 cut(s) 69
Psp124BI GAGCTC 1 cut(s) 1288
Psp6I CCWGG 3 cut(s) 458, 889, 1223
PspGI CCWGG 3 cut(s) 458, 889, 1223
PspN4I GGNNCC 3 cut(s) 1184, 1222, 1351
PspOMI GGGCCC 1 cut(s) 1182
PspPI GGNCC 4 cut(s) 1064, 1182, 1183, 1350
PspXI VCTCGAGB 1 cut(s) 1287
PsuI RGATCY 1 cut(s) 1150
RsaI GTAC 7 cut(s) 392, 404, 564, 888, 1294, 1570, 1811
RsaNI GTAC 7 cut(s) 391, 403, 563, 887, 1293, 1569, 1810
RseI CAYNNNNRTG 2 cut(s) 329, 908
SacI GAGCTC 1 cut(s) 1288
SatI GCNGC 6 cut(s) 167, 1304, 1374, 1446, 1473, 1544
Sau3AI GATC 9 cut(s) 547, 619, 844, 1005, 1101, 1150, 1600, 1691, 1801
Sau96I GGNCC 4 cut(s) 1064, 1182, 1183, 1350
SchI GAGTC 1 cut(s) 757
ScrFI CCNGG 3 cut(s) 460, 891, 1225
SduI GDGCHC 3 cut(s) 1186, 1212, 1288
SfaNI GCATC 5 cut(s) 619, 1360, 1414, 1484, 1668
Sfr274I CTCGAG 1 cut(s) 1287
SinI GGWCC 1 cut(s) 1064
SlaI CTCGAG 1 cut(s) 1287
SmiMI CAYNNNNRTG 2 cut(s) 329, 908
SmlI CTYRAG 3 cut(s) 491, 1236, 1287
SmoI CTYRAG 3 cut(s) 491, 1236, 1287
SpeI ACTAGT 1 cut(s) 1765
Sse9I AATT 8 cut(s) 70, 154, 378, 513, 741, 787, 1435, 1699
SsiI CCGC 2 cut(s) 497, 1721
SspMI CTAG 4 cut(s) 399, 585, 1695, 1766
SstI GAGCTC 1 cut(s) 1288
StyD4I CCNGG 3 cut(s) 458, 889, 1223
StyI CCWWGG 1 cut(s) 475
TaaI ACNGT 2 cut(s) 1297, 1573
TaiI ACGT 2 cut(s) 830, 1165
TaqI TCGA 6 cut(s) 550, 804, 1008, 1100, 1288, 1557
TasI AATT 8 cut(s) 70, 154, 378, 513, 741, 787, 1435, 1699
TatI WGTACW 2 cut(s) 390, 562
TfiI GAWTC 4 cut(s) 85, 355, 443, 556
TscAI CASTG 1 cut(s) 492
TseFI GTSAC 2 cut(s) 221, 1796
TseI GCWGC 6 cut(s) 166, 1303, 1373, 1445, 1472, 1543
Tsp45I GTSAC 2 cut(s) 221, 1796
TspDTI ATGAA 4 cut(s) 167, 198, 408, 1064
TspRI CASTG 1 cut(s) 492
Vha464I CTTAAG 1 cut(s) 491
VpaK11BI GGWCC 1 cut(s) 1064
VspI ATTAAT 1 cut(s) 69
XapI RAATTY 1 cut(s) 1435
XceI RCATGY 3 cut(s) 569, 1472, 1612
XcmI CCANNNNNNNNNTGG 3 cut(s) 512, 642, 1326
XhoI CTCGAG 1 cut(s) 1287
XmiI GTMKAC 3 cut(s) 469, 830, 988
XmnI GAANNNNTTC 1 cut(s) 1779
XspI CTAG 4 cut(s) 399, 585, 1695, 1766
Zsp2I ATGCAT 1 cut(s) 1661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.