Rorug02G0399100

Belongs to the 'GDSL' lipolytic enzyme family

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
Physical Location & Seq
Reverse (-)
51022353 .. 51024761
2409 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0399100.1

Sequence Viewer

Length: 2325 bp
ATGGAGGTTATGGGATTCCCTAACAAGTTTATTTCCCTCATTATGGATTGTGTGAAGTCTGTGACTTATTCTATATTGCTGCAAGGAACTCCTTTTGGTAAAATTAAGCCTTCGCGTGGATTGAGACAAGGGGATCCCATTTCCCCGTATCTTTTTCTGATTGTTGCGGAAGGTTTTTCAGCGTTGATTAGACAAGCTGAACGTGAACAGCAAATTCATGGTGTGGCTATAGCTAGAGGTGCTCCGTCGGTCTCTCATTTGTTTTATGCAGATGATAGTTTGCTATTCTGTGATGCTACGTTATCAGATTGTTTGGCTTTAAAGCATATATTTTCTATCTATGAGGAGGCTTCGGGACAGAAGATTAATCGAGATAAGTCGGCGGTATGTTTTAGTCCGAAGACTCTACAATCTATTAAGGAAGAGTGCATTGCTGTGTTGGACATGCCTGTTGTGCCTTGTCATGAACGTTACCTGGGTTTACCTACCGTAACAGGCAAGGATAAGAAAAAGTTATTTCAGTCCTTACCAGATAGGGTTTGGAATCGTGTGCATGGCTGGGAAGGGAAGCTGATGTCAAAGGCCGGGAAAGAGGTTCTTATTAAAGCCGTGGCTCAAGCAATTCCGAATTATACGATGAGTGTCTTCCAATTGCCGAAGGGGACTTGTGATGATATAAATAAATGTTTAGCGAGATTTTGGTGGGGGAAGGAAGGAGGTAAGGGTATTCATTGGCGGAGATGGAATAATCTTTGTTTCAGTAAGAAGGATGGTGGTCTGGGATTCAGGGAATTATCTCTTTTTAATCAGGCTTTGCTTGGGAAACAGGGATGGAGATTGATGATGTATCCTGATTCCTTGGTGGCTCGTATGTTGAAAGCGAAGTATTTTCCGTGGGATGATTTCATGGAAGCTGAGCTCGGTTCAAGTCCATCGTATTTATGGAGATCGTTGTTATGGGGTAGAGAGCTACTTCGGAAGGGAGTTAGGTGGAGAATTGGGGATGGGCAGAATGTAAGAGTGTTTATTGATCCATGGGTTCCAGGTTTGCCTAGCTTCCGTCCTATTCTGCGGCAAGAAGATGAGTGTGAGGCAATTAGGAGTATCCCAGTTGGTGCCTCAAGACGTCCTGATGTGTATATGTGGAATTTTTGTAAAAACGGTAGATACACAGTGAAAAGTGGATATTGGTTGGCTTGTCAGGATACGGAGGTGGTTGAAGATGTTGTTCATGCTCTTAGAAATTTCTGGAAACATCTCTGGAAGCTGAAATTGCCTCCGAAAATTATTCATTTCTTATGGAGGTGTTCTATGGGTTTTATACCTTGTCTGGAGATATTGCATTGGAGACGAGTTGCCCATTCTGCTACTTGTTTCAGATGCCAGCAGGGAAGCGAGTCGCCTGTACACGCAACATGGGGTTGTTCGAGTTGTGTTGCGGTGTTCGAAAGGGCGAGTTTCTTCTCAAAGTTGTCATCTGGTCAGTTTCCTTGTTTTATTCAATTCTTTCATCATGCTTTTTCTACTCTTGGAGCGGAAGAGATGCAGCTTTTTGCTGTGTTGTTATGGCTAAACTGGCATGAGAGGAATAATTGCTATCATAAGGGAACTGTCATGCCGTCTGATATTATTTATGCGAATGGGGTGAATTTTGTGAAGAGCTTCAATGAGGCTATGAGCTGTCGTGCTAGAGTGGAGCAAAAGGAAACGGAGGATGTAAGGCTGGGGAGGTTACGGAGGTGGCAGCCACCTAGGAGTGGCCAGATTAAGGTGAATTGTGATGGTGCAGTTAATATTAATAATAGATGTGTTGGTGGTGGTGCAATCATAAGGGATGAGCATGGTACGTTGATTGTGGCAGGGGGGGAAAATTTTCAACACCAATTGTCTTCTTTGGTGGCTGAATTATCTGCAATTAAGGTGGGTTTGGAGTTGGTAGTTGAACGAAGATTGTGGAACGTTGCAGTGGAATCTGACAGTATGGAGGCTATACAATTGATCAATTCCAAGGATAGATGTTTTGCTGCTGAAGGAGGTATTGTAGAGGATATTCAACGTACTATGGCTCTACTTAACATCAACACTATTCACCATGTCCGTCGTGAGGGGAATATGGCTGCCCATGCAATTGCAAATCATGTAGCCCGAGCTACTGGGCGTATAGTTTGGTTAGAGGATGGGCCTGATTGGCTCATGTCACTTATCGTCAATGATAAGACTTTAGCCGGTTTATCAGTTAGGGATTTGAGTACTTCTTTTTCTTCTGCTAGGGAGGTTAGGGAGAATGATTTGGATCAATCCCATGGCTGTATTATTTCCAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

774

Amino Acids

87.69

Weight (kDa)

8.89

Isoelectric Point (pI)

46.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RVT_1 PF00078 6 - 131 2e-10 Reverse transcriptase (RNA-dependent DNA polymerase)
zf-RVT PF13966 390 - 477 1.9e-09 zinc-binding in reverse transcriptase
RVT_3 PF13456 592 - 713 8.3e-22 Reverse transcriptase-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000193)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G53940 AT1G53940 AT1G53970 AT1G53970 AT1G53990 AT3G14225 AT3G14225 AT5G40990
fragaria_vesca FvH4_6g34510 FvH4_6g35571 FvH4_6g35571 FvH4_6g35572 FvH4_6g35580 FvH4_6g35580 FvH4_6g35584 FvH4_6g35600 FvH4_6g35610 FvH4_6g35630 FvH4_6g35631
malus_domestica MD00G1137100.v1.1 MD01G1122400.v1.1 MD07G1191900.v1.1 MD09G1174600.v1.1 MD09G1174700.v1.1 MD09G1175100.v1.1 MD17G1151700.v1.1 MD17G1151800.v1.1
prunus_persica Prupe.3G032700_v2.0.a1 Prupe.3G032900_v2.0.a1 Prupe.3G033100_v2.0.a1 Prupe.3G033200_v2.0.a1 Prupe.3G033300_v2.0.a1 Prupe.3G033400_v2.0.a1 Prupe.3G033500_v2.0.a1 Prupe.3G033600_v2.0.a1
pyrus_communis pycom01g14930 pycom09g09170 pycom09g09180 pycom09g09190 pycom09g09220 pycom17g14510
rosa_chinensis RchiOBHm_Chr2g0147161 RchiOBHm_Chr2g0147301 RchiOBHm_Chr2g0147311 RchiOBHm_Chr2g0147391 RchiOBHm_Chr2g0147431 RchiOBHm_Chr2g0147441 RchiOBHm_Chr2g0147471 RchiOBHm_Chr2g0147491 RchiOBHm_Chr2g0147591 RchiOBHm_Chr2g0147911 RchiOBHm_Chr2g0148061 RchiOBHm_Chr4g0407441 RchiOBHm_Chr4g0407471 RchiOBHm_Chr6g0252881 RchiOBHm_Chr7g0228391 RchiOBHm_Chr7g0228411
rosa_laevigata RLG00000001566 RLG00000020247 RLG00000020250 RLG00000020251 RLG00000020252 RLG00000020255 RLG00000020258 RLG00000020261 RLG00000020262 RLG00000020264 RLG00000020293 RLG00000020307 RLG00000030814
rosa_multiflora Rmu_co8112460.1_g000001 Rmu_co8353483.1_g000001 Rmu_co8492209.1_g000001 Rmu_sc0000308.1_g000061 Rmu_sc0000538.1_g000003 Rmu_sc0001159.1_g000017 Rmu_sc0001159.1_g000023 Rmu_sc0001159.1_g000050 Rmu_sc0001880.1_g000011 Rmu_sc0006302.1_g000003 Rmu_sc0008083.1_g000003 Rmu_sc0010661.1_g000002 Rmu_sc0017091.1_g000001 Rmu_sc0021146.1_g000001
rosa_roxburghii Rroxscaffold_2G00099470 Rroxscaffold_2G00099500 Rroxscaffold_2G00099530 Rroxscaffold_2G00099590 Rroxscaffold_2G00113160 Rroxscaffold_2G00113180 Rroxscaffold_3G00231150 Rroxscaffold_4G00332370 Rroxscaffold_5G00352070
rosa_rugosa Rorug02G0398800 Rorug02G0399100 Rorug02G0399200 Rorug02G0399300 Rorug02G0400100 Rorug02G0400200 Rorug02G0400300.1 Rorug02G0403000 Rorug05G0546600 Rorug05G0547200 Rorug07G0249100 Rorug07G0249200.1 RorugPtG0001700.1
rosa_samantha Rh1CG003800 Rh2AG456000 Rh2AG456200 Rh2AG456400 Rh2AG456500 Rh2AG456900 Rh2AG457200 Rh2AG457500 Rh2AG457600 Rh2AG457700 Rh2AG460000 Rh2AG460400 Rh2BG468900 Rh2BG469000 Rh2BG469800 Rh2BG469900 Rh2BG470000 Rh2BG473300 Rh2BG473800 Rh2CG443400 Rh2CG443800 Rh2CG443900 Rh2CG444400 Rh2CG444600 Rh2CG445000 Rh2CG445100 Rh2CG447300 Rh2CG447600 Rh2DG478200 Rh2DG478300 Rh2DG479300 Rh2DG479500 Rh2DG482200 Rh4AG048300 Rh4CG051600 Rh4CG051700 Rh4CG151200 Rh7AG401800 Rh7CG420700 Rh7DG397900
rosa_wichuraiana Rw2G037300 Rw2G037330 Rw2G037350 Rw2G037360 Rw2G037390 Rw2G037410 Rw2G037620 Rw4G003830 Rw6G005020 Rw6G005580 Rw7G033400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1129
AccB1I GGYRCC 1 cut(s) 1115
AccBSI CCGCTC 1 cut(s) 1535
AccII CGCG 1 cut(s) 115
AciI CCGC 6 cut(s) 167, 383, 736, 1072, 1439, 1535
AclI AACGTT 2 cut(s) 469, 1959
AclWI GGATC 4 cut(s) 128, 141, 1025, 2301
AcoI YGGCCR 1 cut(s) 1759
AcsI RAATTY 5 cut(s) 213, 1147, 1243, 1648, 1870
AcuI CTGAAG 1 cut(s) 2049
AcyI GRCGYC 1 cut(s) 1126
AfaI GTAC 4 cut(s) 1407, 1846, 2059, 2251
AfiI CCNNNNNNNGG 5 cut(s) 43, 116, 1757, 1768, 2104
AgsI TTSAA 8 cut(s) 877, 927, 1220, 1502, 1666, 1877, 1943, 2054
AjnI CCWGG 2 cut(s) 474, 1042
Alw21I GWGCWC 2 cut(s) 244, 921
Alw26I GTCTC 3 cut(s) 118, 256, 1342
AlwI GGATC 4 cut(s) 128, 141, 1025, 2301
Ama87I CYCGRG 1 cut(s) 2145
AoxI GGCC 3 cut(s) 582, 1759, 2180
ApeKI GCWGC 5 cut(s) 79, 1546, 1744, 2024, 2117
ApoI RAATTY 5 cut(s) 213, 1147, 1243, 1648, 1870
AseI ATTAAT 2 cut(s) 366, 1797
Asp700I GAANNNNTTC 2 cut(s) 1661, 1872
AspA2I CCTAGG 1 cut(s) 1751
AspS9I GGNCC 1 cut(s) 2180
AsuC2I CCSGG 1 cut(s) 586
AsuHPI GGTGA 3 cut(s) 1657, 1783, 2081
AsuII TTCGAA 1 cut(s) 1446
AvaI CYCGRG 1 cut(s) 2145
AvrII CCTAGG 1 cut(s) 1751
BaeI ACNNNNGTAYC 2 cut(s) 1197, 1230
BalI TGGCCA 1 cut(s) 1761
BamHI GGATCC 1 cut(s) 133
BanI GGYRCC 1 cut(s) 1115
BanII GRGCYC 1 cut(s) 921
BbsI GAAGAC 3 cut(s) 407, 637, 1881
Bbv12I GWGCWC 2 cut(s) 244, 921
BbvI GCAGC 5 cut(s) 66, 1558, 1756, 2011, 2104
BccI CCATC 7 cut(s) 735, 764, 825, 940, 998, 1775, 2171
BceAI ACGGC 2 cut(s) 593, 1603
BciT130I CCWGG 2 cut(s) 476, 1044
BciVI GTATCC 3 cut(s) 858, 1115, 1198
BclI TGATCA 1 cut(s) 1998
BcnI CCSGG 1 cut(s) 586
BcoDI GTCTC 3 cut(s) 118, 256, 1342
BfaI CTAG 5 cut(s) 234, 1053, 1689, 1752, 2268
BfmI CTRYAG 1 cut(s) 228
BfuI GTATCC 3 cut(s) 858, 1115, 1198
BglI GCCNNNNNGGC 1 cut(s) 2188
BisI GCNGC 6 cut(s) 80, 1073, 1547, 1745, 2025, 2118
BlnI CCTAGG 1 cut(s) 1751
BlpI GCTNAGC 1 cut(s) 915
BlsI GCNGC 6 cut(s) 81, 1074, 1548, 1746, 2026, 2119
BmcAI AGTACT 1 cut(s) 2251
Bme1390I CCNGG 3 cut(s) 476, 586, 1044
BmeT110I CYCGRG 1 cut(s) 2145
BmgT120I GGNCC 1 cut(s) 2180
BmiI GGNNCC 3 cut(s) 135, 1041, 1117
BmrFI CCNGG 3 cut(s) 476, 586, 1044
BmrI ACTGGG 2 cut(s) 1103, 2163
BmsI GCATC 3 cut(s) 283, 1370, 1533
BmuI ACTGGG 2 cut(s) 1103, 2163
BpiI GAAGAC 3 cut(s) 407, 637, 1881
BpmI CTGGAG 1 cut(s) 1352
Bpu1102I GCTNAGC 1 cut(s) 915
Bpu14I TTCGAA 1 cut(s) 1446
BpuEI CTTGAG 2 cut(s) 600, 1105
BpuMI CCSGG 1 cut(s) 586
BsaBI GATNNNNATC 1 cut(s) 2292
BsaHI GRCGYC 1 cut(s) 1126
BsaI GGTCTC 1 cut(s) 256
BsaJI CCNNGG 8 cut(s) 475, 609, 858, 893, 1034, 1751, 2007, 2302
BsaXI ACNNNNNCTCC 2 cut(s) 2025, 2055
Bsc4I CCNNNNNNNGG 5 cut(s) 43, 116, 1757, 1768, 2104
Bse118I RCCGGY 1 cut(s) 2225
Bse1I ACTGG 4 cut(s) 1109, 1580, 2158, 2319
Bse3DI GCAATG 1 cut(s) 429
Bse8I GATNNNNATC 1 cut(s) 2292
BseBI CCWGG 2 cut(s) 476, 1044
BseDI CCNNGG 8 cut(s) 475, 609, 858, 893, 1034, 1751, 2007, 2302
BseGI GGATG 7 cut(s) 775, 836, 904, 1009, 1720, 1840, 2182
BseJI GATNNNNATC 1 cut(s) 2292
BseLI CCNNNNNNNGG 5 cut(s) 43, 116, 1757, 1768, 2104
BseMI GCAATG 1 cut(s) 429
BseMII CTCAG 1 cut(s) 906
BseNI ACTGG 4 cut(s) 1109, 1580, 2158, 2319
BseRI GAGGAG 1 cut(s) 359
BseXI GCAGC 5 cut(s) 66, 1558, 1756, 2011, 2104
BseYI CCCAGC 2 cut(s) 558, 1723
BsgI GTGCAG 1 cut(s) 1806
Bsh1236I CGCG 1 cut(s) 115
BshFI GGCC 3 cut(s) 584, 1761, 2182
BshNI GGYRCC 1 cut(s) 1115
BsiHKAI GWGCWC 2 cut(s) 244, 921
BsiHKCI CYCGRG 1 cut(s) 2145
BsiSI CCGG 2 cut(s) 585, 2226
BslFI GGGAC 2 cut(s) 369, 676
BslI CCNNNNNNNGG 5 cut(s) 43, 116, 1757, 1768, 2104
BsmAI GTCTC 3 cut(s) 118, 256, 1342
BsmBI CGTCTC 1 cut(s) 1342
BsmFI GGGAC 2 cut(s) 369, 676
BsnI GGCC 3 cut(s) 584, 1761, 2182
Bso31I GGTCTC 1 cut(s) 256
BsoBI CYCGRG 1 cut(s) 2145
Bsp119I TTCGAA 1 cut(s) 1446
Bsp1286I GDGCHC 2 cut(s) 244, 921
Bsp1407I TGTACA 1 cut(s) 1405
Bsp143I GATC 5 cut(s) 133, 947, 1030, 1998, 2293
Bsp1720I GCTNAGC 1 cut(s) 915
Bsp19I CCATGG 2 cut(s) 1034, 2302
BspACI CCGC 6 cut(s) 167, 383, 736, 1072, 1439, 1535
BspANI GGCC 3 cut(s) 584, 1761, 2182
BspCNI CTCAG 1 cut(s) 907
BspFNI CGCG 1 cut(s) 115
BspHI TCATGA 1 cut(s) 463
BspLI GGNNCC 3 cut(s) 135, 1041, 1117
BspPI GGATC 4 cut(s) 128, 141, 1025, 2301
BspQI GCTCTTC 1 cut(s) 1652
BspT104I TTCGAA 1 cut(s) 1446
BspT107I GGYRCC 1 cut(s) 1115
BspTNI GGTCTC 1 cut(s) 256
BsrBI CCGCTC 1 cut(s) 1535
BsrDI GCAATG 1 cut(s) 429
BsrFI RCCGGY 1 cut(s) 2225
BsrGI TGTACA 1 cut(s) 1405
BsrI ACTGG 4 cut(s) 1109, 1580, 2158, 2319
BssAI RCCGGY 1 cut(s) 2225
BssECI CCNNGG 8 cut(s) 475, 609, 858, 893, 1034, 1751, 2007, 2302
BssMI GATC 5 cut(s) 133, 947, 1030, 1998, 2293
BssNI GRCGYC 1 cut(s) 1126
BssT1I CCWWGG 5 cut(s) 858, 1034, 1751, 2007, 2302
Bst2UI CCWGG 2 cut(s) 476, 1044
Bst4CI ACNGT 5 cut(s) 490, 1163, 1174, 1612, 1979
Bst6I CTCTTC 3 cut(s) 417, 1533, 1652
BstACI GRCGYC 1 cut(s) 1126
BstAUI TGTACA 1 cut(s) 1405
BstBI TTCGAA 1 cut(s) 1446
BstC8I GCNNGC 1 cut(s) 1385
BstDEI CTNAG 2 cut(s) 915, 1238
BstDSI CCRYGG 4 cut(s) 609, 893, 1034, 2302
BstF5I GGATG 7 cut(s) 775, 836, 904, 1009, 1720, 1840, 2182
BstFNI CGCG 1 cut(s) 115
BstKTI GATC 5 cut(s) 136, 950, 1033, 2001, 2296
BstMAI GTCTC 3 cut(s) 118, 256, 1342
BstMBI GATC 5 cut(s) 133, 947, 1030, 1998, 2293
BstMWI GCNNNNNNNGC 7 cut(s) 239, 454, 1273, 1364, 1576, 2123, 2188
BstNI CCWGG 2 cut(s) 476, 1044
BstNSI RCATGY 1 cut(s) 448
BstSCI CCNGG 3 cut(s) 474, 584, 1042
BstSFI CTRYAG 1 cut(s) 228
BstUI CGCG 1 cut(s) 115
BstV1I GCAGC 5 cut(s) 66, 1558, 1756, 2011, 2104
BstV2I GAAGAC 3 cut(s) 407, 637, 1881
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
BsuI GTATCC 3 cut(s) 858, 1115, 1198
BsuRI GGCC 3 cut(s) 584, 1761, 2182
BtgI CCRYGG 4 cut(s) 609, 893, 1034, 2302
BtsCI GGATG 7 cut(s) 775, 836, 904, 1009, 1720, 1840, 2182
BtsI GCAGTG 1 cut(s) 1971
BtsIMutI CAGTG 2 cut(s) 1179, 1971
Cac8I GCNNGC 1 cut(s) 1385
CciI TCATGA 1 cut(s) 463
Cfr10I RCCGGY 1 cut(s) 2225
Cfr13I GGNCC 1 cut(s) 2180
Csp6I GTAC 4 cut(s) 1406, 1845, 2058, 2250
CspCI CAANNNNNGTGG 2 cut(s) 1902, 1937
CviQI GTAC 4 cut(s) 1406, 1845, 2058, 2250
DdeI CTNAG 2 cut(s) 915, 1238
DpnI GATC 5 cut(s) 135, 949, 1032, 2000, 2295
DpnII GATC 5 cut(s) 133, 947, 1030, 1998, 2293
DraI TTTAAA 1 cut(s) 321
EaeI YGGCCR 1 cut(s) 1759
Eam1104I CTCTTC 3 cut(s) 417, 1533, 1652
EarI CTCTTC 3 cut(s) 417, 1533, 1652
EciI GGCGGA 1 cut(s) 751
Ecl136II GAGCTC 1 cut(s) 919
Eco130I CCWWGG 5 cut(s) 858, 1034, 1751, 2007, 2302
Eco24I GRGCYC 1 cut(s) 921
Eco31I GGTCTC 1 cut(s) 256
Eco53kI GAGCTC 1 cut(s) 919
Eco57I CTGAAG 1 cut(s) 2049
Eco88I CYCGRG 1 cut(s) 2145
EcoICRI GAGCTC 1 cut(s) 919
EcoRII CCWGG 2 cut(s) 474, 1042
EcoT14I CCWWGG 5 cut(s) 858, 1034, 1751, 2007, 2302
EcoT38I GRGCYC 1 cut(s) 921
ErhI CCWWGG 5 cut(s) 858, 1034, 1751, 2007, 2302
Esp3I CGTCTC 1 cut(s) 1342
FalI AAGNNNNNCTT 2 cut(s) 582, 614
FaqI GGGAC 2 cut(s) 369, 676
FbaI TGATCA 1 cut(s) 1998
Fnu4HI GCNGC 6 cut(s) 80, 1073, 1547, 1745, 2025, 2118
FokI GGATG 7 cut(s) 782, 843, 911, 1016, 1727, 1847, 2189
FriOI GRGCYC 1 cut(s) 921
Fsp4HI GCNGC 6 cut(s) 80, 1073, 1547, 1745, 2025, 2118
FspBI CTAG 5 cut(s) 234, 1053, 1689, 1752, 2268
GluI GCNGC 6 cut(s) 80, 1073, 1547, 1745, 2025, 2118
GsaI CCCAGC 2 cut(s) 562, 1727
GsuI CTGGAG 1 cut(s) 1352
HaeIII GGCC 3 cut(s) 584, 1761, 2182
HapII CCGG 2 cut(s) 585, 2226
Hin1I GRCGYC 1 cut(s) 1126
HinfI GANTC 7 cut(s) 15, 403, 544, 783, 854, 1397, 1970
HpaII CCGG 2 cut(s) 585, 2226
HphI GGTGA 3 cut(s) 1657, 1783, 2081
Hpy166II GTNNAC 3 cut(s) 206, 482, 1408
Hpy188I TCNGA 9 cut(s) 159, 307, 399, 627, 978, 1281, 1379, 1624, 1975
Hpy8I GTNNAC 3 cut(s) 206, 482, 1408
Hpy99I CGWCG 2 cut(s) 250, 2103
HpyAV CCTTC 9 cut(s) 120, 164, 557, 652, 703, 707, 760, 973, 2024
HpyCH4III ACNGT 5 cut(s) 490, 1163, 1174, 1612, 1979
HpyCH4IV ACGT 7 cut(s) 202, 299, 469, 1126, 1847, 1959, 2056
HpyF10VI GCNNNNNNNGC 7 cut(s) 239, 454, 1273, 1364, 1576, 2123, 2188
HpyF3I CTNAG 2 cut(s) 915, 1238
HpySE526I ACGT 7 cut(s) 202, 299, 469, 1126, 1847, 1959, 2056
Hsp92I GRCGYC 1 cut(s) 1126
Ksp22I TGATCA 1 cut(s) 1998
Kzo9I GATC 5 cut(s) 133, 947, 1030, 1998, 2293
LguI GCTCTTC 1 cut(s) 1652
LmnI GCTCC 3 cut(s) 247, 1532, 1696
Lsp1109I GCAGC 5 cut(s) 66, 1558, 1756, 2011, 2104
LweI GCATC 3 cut(s) 283, 1370, 1533
MaeI CTAG 5 cut(s) 234, 1053, 1689, 1752, 2268
MaeII ACGT 7 cut(s) 202, 299, 469, 1126, 1847, 1959, 2056
MaeIII GTNAC 5 cut(s) 61, 470, 490, 1731, 2196
MalI GATC 5 cut(s) 135, 949, 1032, 2000, 2295
MbiI CCGCTC 1 cut(s) 1535
MboI GATC 5 cut(s) 133, 947, 1030, 1998, 2293
MfeI CAATTG 4 cut(s) 650, 1883, 1994, 2127
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 2 cut(s) 244, 921
MlsI TGGCCA 1 cut(s) 1761
MluNI TGGCCA 1 cut(s) 1761
MlyI GAGTC 2 cut(s) 397, 1406
MmeI TCCRAC 1 cut(s) 420
Mox20I TGGCCA 1 cut(s) 1761
MroXI GAANNNNTTC 2 cut(s) 1661, 1872
MscI TGGCCA 1 cut(s) 1761
MslI CAYNNNNRTG 1 cut(s) 434
Msp20I TGGCCA 1 cut(s) 1761
MspI CCGG 2 cut(s) 585, 2226
MspR9I CCNGG 3 cut(s) 476, 586, 1044
MunI CAATTG 4 cut(s) 650, 1883, 1994, 2127
MvaI CCWGG 2 cut(s) 476, 1044
MvnI CGCG 1 cut(s) 115
MwoI GCNNNNNNNGC 7 cut(s) 239, 454, 1273, 1364, 1576, 2123, 2188
NciI CCSGG 1 cut(s) 586
NcoI CCATGG 2 cut(s) 1034, 2302
NdeII GATC 5 cut(s) 133, 947, 1030, 1998, 2293
NlaIV GGNNCC 3 cut(s) 135, 1041, 1117
NmuCI GTSAC 2 cut(s) 61, 2196
NspI RCATGY 1 cut(s) 448
NspV TTCGAA 1 cut(s) 1446
PagI TCATGA 1 cut(s) 463
PciSI GCTCTTC 1 cut(s) 1652
PdmI GAANNNNTTC 2 cut(s) 1661, 1872
PfeI GAWTC 5 cut(s) 15, 544, 783, 854, 1970
PkrI GCNGC 6 cut(s) 81, 1074, 1548, 1746, 2026, 2119
PleI GAGTC 2 cut(s) 397, 1405
PpsI GAGTC 2 cut(s) 397, 1405
PshBI ATTAAT 2 cut(s) 366, 1797
Psp124BI GAGCTC 1 cut(s) 921
Psp1406I AACGTT 2 cut(s) 469, 1959
Psp6I CCWGG 2 cut(s) 474, 1042
PspFI CCCAGC 2 cut(s) 558, 1723
PspGI CCWGG 2 cut(s) 474, 1042
PspN4I GGNNCC 3 cut(s) 135, 1041, 1117
PspPI GGNCC 1 cut(s) 2180
PsuI RGATCY 1 cut(s) 133
RsaI GTAC 4 cut(s) 1407, 1846, 2059, 2251
RsaNI GTAC 4 cut(s) 1406, 1845, 2058, 2250
RseI CAYNNNNRTG 1 cut(s) 434
SacI GAGCTC 1 cut(s) 921
SapI GCTCTTC 1 cut(s) 1652
SatI GCNGC 6 cut(s) 80, 1073, 1547, 1745, 2025, 2118
Sau3AI GATC 5 cut(s) 133, 947, 1030, 1998, 2293
Sau96I GGNCC 1 cut(s) 2180
ScaI AGTACT 1 cut(s) 2251
SchI GAGTC 2 cut(s) 397, 1406
ScrFI CCNGG 3 cut(s) 476, 586, 1044
SduI GDGCHC 2 cut(s) 244, 921
SfaNI GCATC 3 cut(s) 283, 1370, 1533
SfcI CTRYAG 1 cut(s) 228
SfuI TTCGAA 1 cut(s) 1446
SmiMI CAYNNNNRTG 1 cut(s) 434
SmlI CTYRAG 2 cut(s) 615, 1120
SmoI CTYRAG 2 cut(s) 615, 1120
SsiI CCGC 6 cut(s) 167, 383, 736, 1072, 1439, 1535
SspI AATATT 1 cut(s) 1795
SspMI CTAG 5 cut(s) 234, 1053, 1689, 1752, 2268
SstI GAGCTC 1 cut(s) 921
StyD4I CCNGG 3 cut(s) 474, 584, 1042
StyI CCWWGG 5 cut(s) 858, 1034, 1751, 2007, 2302
TaaI ACNGT 5 cut(s) 490, 1163, 1174, 1612, 1979
TaiI ACGT 7 cut(s) 205, 302, 472, 1129, 1850, 1962, 2059
TaqI TCGA 3 cut(s) 370, 1427, 1446
TaqII GACCGA 1 cut(s) 238
TatI WGTACW 2 cut(s) 1405, 2249
TauI GCSGC 1 cut(s) 1075
TfiI GAWTC 5 cut(s) 15, 544, 783, 854, 1970
TscAI CASTG 2 cut(s) 1179, 1971
TseFI GTSAC 2 cut(s) 61, 2196
TseI GCWGC 5 cut(s) 79, 1546, 1744, 2024, 2117
Tsp45I GTSAC 2 cut(s) 61, 2196
TspDTI ATGAA 7 cut(s) 206, 480, 719, 895, 1220, 1280, 1499
TspGWI ACGGA 7 cut(s) 234, 882, 1049, 1223, 1724, 1750, 2087
TspRI CASTG 2 cut(s) 1179, 1971
VspI ATTAAT 2 cut(s) 366, 1797
XapI RAATTY 5 cut(s) 213, 1147, 1243, 1648, 1870
XceI RCATGY 1 cut(s) 448
XcmI CCANNNNNNNNNTGG 2 cut(s) 537, 939
XmaJI CCTAGG 1 cut(s) 1751
XmnI GAANNNNTTC 2 cut(s) 1661, 1872
XspI CTAG 5 cut(s) 234, 1053, 1689, 1752, 2268
ZraI GACGTC 1 cut(s) 1127
ZrmI AGTACT 1 cut(s) 2251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.