Rroxscaffold_2G00080860

Homeodomain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0000483
Physical Location & Seq
Reverse (-)
3790056 .. 3792736
2681 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00080860.1

Sequence Viewer

Length: 951 bp
ATGGAGCGACCGGCGAGCTCATTCCGAACTCATCCAAGGAAACCCGAAGTCGTGCCGACGTCGGAGCCGCAATTCCGGCCGGTCGAAAACGTAAACCGCGCGCCGCCTTGCTGCACCACCGTGGGCTCGAATCGTCGACGGCGACCACCACGGGGACGATCGGAAGGAGGAGGCGACCTCGCCGGTGAAGTTTCACGGCGGAGCTTTCGACCCAACAACAAATGGAATTTCAAGCCCAAGAACCAACCGGGGAGGGAGGAAGCAACCAATCGGCCGGCGGTGGTGCCAATCGCTGTCGGGCGACACGGTACCCGATGGACTCCCACACCGCCTCGGCTAAGAATCCTCGAGGGCCTTTACTATGATAAGGGCTTTAAGCGTCCAACTCCCGAGCAGATTCGGGAGATCCGCCTCGGCTGCGCGATTTGGGCCGATCGAGGACAAAAACGTGTTCTTCGGTTCCGAGAACCTCAAGTCCCGAGAGAGCCAACGGATGAAGGCATTCGGAACGTGCGGGTTGGCGGATCTCTCGATCTCAACTTCGGACCCGCAAATTCTACGGATGAAGATGGAGTCATCGATTTGAACTTTGGTCCCTCTCGTTCCTACGGAGCCGATGGATCCATCTATCTCGCTTTCGGGTCAAACGCCGACCATCCCGTCGACCCGAATTCCATTTCACCTTTCAACAATAACAGCGACTACCTCCTTCGGTACAACGGAGGTCAACCATCCATGGAACAACGAGGAGGAGATCGGCGAGGAGATCGAAACCCTTCTCCTGTCCCCGTGCATAGCGAGGACATCTTTGGTAACCCGATGACTACTTCGGGGAAGGTAGCTCATACGATTACCATCCCGGTGGCTCGGGCCGTAACAACGGTGGCTCTCAAGTCTCTCGAGCTCGGCCTCGACCCATCGGAGCCACCGACTTATCTTAGTACGGTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Homeobox

Protein Analysis

316

Amino Acids

34.96

Weight (kDa)

9.9

Isoelectric Point (pI)

54.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000483)

Species Orthologous Gene IDs
rosa_multiflora Rmu_sc0002132.1_g000009 Rmu_sc0002786.1_g000030
rosa_roxburghii Rroxscaffold_159G00432910 Rroxscaffold_159G00433130 Rroxscaffold_166G00440820 Rroxscaffold_173G00435050 Rroxscaffold_174G00435100 Rroxscaffold_180G00433390 Rroxscaffold_180G00433400 Rroxscaffold_180G00433440 Rroxscaffold_180G00433490 Rroxscaffold_1G00000420 Rroxscaffold_1G00000930 Rroxscaffold_1G00002350 Rroxscaffold_1G00003270 Rroxscaffold_1G00003640 Rroxscaffold_1G00004210 Rroxscaffold_1G00022320 Rroxscaffold_1G00036090 Rroxscaffold_1G00042540 Rroxscaffold_2G00080860 Rroxscaffold_2G00084440 Rroxscaffold_2G00085920 Rroxscaffold_2G00087210 Rroxscaffold_2G00087260 Rroxscaffold_2G00089240 Rroxscaffold_2G00096210 Rroxscaffold_2G00098680 Rroxscaffold_2G00099730 Rroxscaffold_2G00102340 Rroxscaffold_2G00102390 Rroxscaffold_2G00107430 Rroxscaffold_2G00115560 Rroxscaffold_2G00128260 Rroxscaffold_3G00221780 Rroxscaffold_3G00224580 Rroxscaffold_3G00225490 Rroxscaffold_3G00234530 Rroxscaffold_3G00235740 Rroxscaffold_3G00236590 Rroxscaffold_3G00239210 Rroxscaffold_3G00239230 Rroxscaffold_3G00239360 Rroxscaffold_3G00239370 Rroxscaffold_3G00239470 Rroxscaffold_3G00239810 Rroxscaffold_3G00251240 Rroxscaffold_4G00289430 Rroxscaffold_4G00289730 Rroxscaffold_4G00312680 Rroxscaffold_4G00312710 Rroxscaffold_4G00315640 Rroxscaffold_4G00316240 Rroxscaffold_4G00316300 Rroxscaffold_4G00317170 Rroxscaffold_4G00317290 Rroxscaffold_4G00321790 Rroxscaffold_4G00322370 Rroxscaffold_4G00330370 Rroxscaffold_4G00331530 Rroxscaffold_4G00332570 Rroxscaffold_5G00338020 Rroxscaffold_5G00339400 Rroxscaffold_5G00344280 Rroxscaffold_5G00345300 Rroxscaffold_5G00346730 Rroxscaffold_5G00359170 Rroxscaffold_5G00370850 Rroxscaffold_5G00371460 Rroxscaffold_5G00380840 Rroxscaffold_6G00389750 Rroxscaffold_6G00389760 Rroxscaffold_6G00390470 Rroxscaffold_6G00390510 Rroxscaffold_6G00390560 Rroxscaffold_6G00390590 Rroxscaffold_6G00391550 Rroxscaffold_6G00391700 Rroxscaffold_6G00398420 Rroxscaffold_7G00183290 Rroxscaffold_7G00184060 Rroxscaffold_7G00191180 Rroxscaffold_7G00193290 Rroxscaffold_7G00195040 Rroxscaffold_7G00196890 Rroxscaffold_7G00199380 Rroxscaffold_7G00199440 Rroxscaffold_7G00201010 Rroxscaffold_7G00202460
rosa_rugosa Rorug04G0280300

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 659
AatII GACGTC 1 cut(s) 62
AbsI CCTCGAGG 1 cut(s) 347
Acc65I GGTACC 1 cut(s) 308
AccB1I GGYRCC 2 cut(s) 283, 308
AccI GTMKAC 2 cut(s) 136, 663
AccII CGCG 3 cut(s) 99, 101, 422
AclWI GGATC 4 cut(s) 400, 532, 615, 628
AcoI YGGCCR 2 cut(s) 77, 272
AcsI RAATTY 3 cut(s) 226, 553, 670
AcyI GRCGYC 1 cut(s) 59
AfaI GTAC 3 cut(s) 310, 716, 943
AfiI CCNNNNNNNGG 1 cut(s) 152
AflIII ACRYGT 1 cut(s) 448
AgsI TTSAA 3 cut(s) 232, 586, 688
AleI CACNNNNGTG 1 cut(s) 119
AloI GAACNNNNNNTCC 2 cut(s) 459, 491
AluBI AGCT 4 cut(s) 18, 204, 842, 904
AluI AGCT 4 cut(s) 18, 204, 842, 904
Alw21I GWGCWC 2 cut(s) 20, 906
Alw26I GTCTC 1 cut(s) 900
AlwI GGATC 4 cut(s) 400, 532, 615, 628
Ama87I CYCGRG 5 cut(s) 347, 389, 478, 867, 899
AoxI GGCC 6 cut(s) 77, 272, 352, 429, 870, 907
ApeKI GCWGC 2 cut(s) 111, 417
ApoI RAATTY 3 cut(s) 226, 553, 670
Asp700I GAANNNNTTC 2 cut(s) 501, 775
Asp718I GGTACC 1 cut(s) 308
AspLEI GCGC 3 cut(s) 101, 103, 422
AspS9I GGNCC 5 cut(s) 352, 429, 545, 593, 870
AsuC2I CCSGG 2 cut(s) 249, 860
AsuHPI GGTGA 2 cut(s) 197, 672
AvaI CYCGRG 5 cut(s) 347, 389, 478, 867, 899
AvaII GGWCC 2 cut(s) 545, 593
BamHI GGATCC 1 cut(s) 620
BanI GGYRCC 2 cut(s) 283, 308
BanII GRGCYC 3 cut(s) 20, 128, 906
Bbv12I GWGCWC 2 cut(s) 20, 906
BbvI GCAGC 2 cut(s) 98, 404
BccI CCATC 8 cut(s) 309, 563, 611, 632, 663, 739, 863, 925
BceAI ACGGC 3 cut(s) 155, 212, 857
BcnI CCSGG 2 cut(s) 249, 860
BcoDI GTCTC 1 cut(s) 900
BisI GCNGC 4 cut(s) 68, 104, 112, 418
BlsI GCNGC 4 cut(s) 69, 105, 113, 419
Bme1390I CCNGG 2 cut(s) 249, 860
Bme18I GGWCC 2 cut(s) 545, 593
BmeT110I CYCGRG 5 cut(s) 347, 389, 478, 867, 899
BmgT120I GGNCC 5 cut(s) 352, 429, 545, 593, 870
BmiI GGNNCC 9 cut(s) 66, 285, 310, 461, 547, 595, 613, 622, 924
BmrFI CCNGG 2 cut(s) 249, 860
BplI GAGNNNNNCTC 2 cut(s) 162, 194
BpuEI CTTGAG 2 cut(s) 456, 875
BpuMI CCSGG 2 cut(s) 249, 860
Bsa29I ATCGAT 1 cut(s) 579
BsaBI GATNNNNATC 1 cut(s) 854
BsaHI GRCGYC 1 cut(s) 59
BsaJI CCNNGG 7 cut(s) 35, 120, 149, 248, 332, 412, 735
Bsc4I CCNNNNNNNGG 1 cut(s) 152
Bse118I RCCGGY 4 cut(s) 10, 79, 182, 274
Bse8I GATNNNNATC 1 cut(s) 854
BseCI ATCGAT 1 cut(s) 579
BseDI CCNNGG 7 cut(s) 35, 120, 149, 248, 332, 412, 735
BseGI GGATG 6 cut(s) 31, 499, 568, 655, 731, 855
BseJI GATNNNNATC 1 cut(s) 854
BseLI CCNNNNNNNGG 1 cut(s) 152
BsePI GCGCGC 1 cut(s) 99
BseRI GAGGAG 4 cut(s) 183, 762, 765, 777
BseX3I CGGCCG 2 cut(s) 77, 272
BseXI GCAGC 2 cut(s) 98, 404
BsgI GTGCAG 1 cut(s) 97
Bsh1236I CGCG 3 cut(s) 99, 101, 422
Bsh1285I CGRYCG 6 cut(s) 11, 80, 84, 161, 275, 436
BshFI GGCC 6 cut(s) 79, 274, 354, 431, 872, 909
BshNI GGYRCC 2 cut(s) 283, 308
BshVI ATCGAT 1 cut(s) 579
BsiEI CGRYCG 6 cut(s) 11, 80, 84, 161, 275, 436
BsiHKAI GWGCWC 2 cut(s) 20, 906
BsiHKCI CYCGRG 5 cut(s) 347, 389, 478, 867, 899
BsiSI CCGG 7 cut(s) 11, 76, 80, 183, 248, 275, 860
BslFI GGGAC 4 cut(s) 168, 461, 579, 770
BslI CCNNNNNNNGG 1 cut(s) 152
BsmAI GTCTC 1 cut(s) 900
BsmFI GGGAC 4 cut(s) 168, 461, 579, 770
BsmI GAATGC 1 cut(s) 501
BsnI GGCC 6 cut(s) 79, 274, 354, 431, 872, 909
BsoBI CYCGRG 5 cut(s) 347, 389, 478, 867, 899
Bsp1286I GDGCHC 3 cut(s) 20, 128, 906
Bsp143I GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
Bsp19I CCATGG 1 cut(s) 735
BspANI GGCC 6 cut(s) 79, 274, 354, 431, 872, 909
BspDI ATCGAT 1 cut(s) 579
BspFNI CGCG 3 cut(s) 99, 101, 422
BspLI GGNNCC 9 cut(s) 66, 285, 310, 461, 547, 595, 613, 622, 924
BspPI GGATC 4 cut(s) 400, 532, 615, 628
BspT107I GGYRCC 2 cut(s) 283, 308
BsrFI RCCGGY 4 cut(s) 10, 79, 182, 274
BssAI RCCGGY 4 cut(s) 10, 79, 182, 274
BssECI CCNNGG 7 cut(s) 35, 120, 149, 248, 332, 412, 735
BssHII GCGCGC 1 cut(s) 99
BssMI GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
BssNI GRCGYC 1 cut(s) 59
BssT1I CCWWGG 2 cut(s) 35, 735
Bst4CI ACNGT 4 cut(s) 121, 308, 883, 946
BstACI GRCGYC 1 cut(s) 59
BstC8I GCNNGC 3 cut(s) 16, 101, 276
BstDEI CTNAG 2 cut(s) 338, 938
BstDSI CCRYGG 3 cut(s) 120, 149, 735
BstEII GGTNACC 1 cut(s) 812
BstF5I GGATG 6 cut(s) 31, 499, 568, 655, 731, 855
BstFNI CGCG 3 cut(s) 99, 101, 422
BstHHI GCGC 3 cut(s) 101, 103, 422
BstKTI GATC 8 cut(s) 161, 408, 436, 527, 535, 623, 757, 769
BstMAI GTCTC 1 cut(s) 900
BstMBI GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
BstMCI CGRYCG 6 cut(s) 11, 80, 84, 161, 275, 436
BstMWI GCNNNNNNNGC 3 cut(s) 76, 417, 428
BstPI GGTNACC 1 cut(s) 812
BstSCI CCNGG 2 cut(s) 247, 858
BstUI CGCG 3 cut(s) 99, 101, 422
BstV1I GCAGC 2 cut(s) 98, 404
BstX2I RGATCY 3 cut(s) 405, 524, 620
BstXI CCANNNNNNTGG 1 cut(s) 862
BstYI RGATCY 3 cut(s) 405, 524, 620
BstZI CGGCCG 2 cut(s) 77, 272
Bsu15I ATCGAT 1 cut(s) 579
BsuRI GGCC 6 cut(s) 79, 274, 354, 431, 872, 909
BsuTUI ATCGAT 1 cut(s) 579
BtgI CCRYGG 3 cut(s) 120, 149, 735
BtsCI GGATG 6 cut(s) 31, 499, 568, 655, 731, 855
Cac8I GCNNGC 3 cut(s) 16, 101, 276
CfoI GCGC 3 cut(s) 101, 103, 422
Cfr10I RCCGGY 4 cut(s) 10, 79, 182, 274
Cfr13I GGNCC 5 cut(s) 352, 429, 545, 593, 870
ClaI ATCGAT 1 cut(s) 579
CseI GACGC 1 cut(s) 368
Csp6I GTAC 3 cut(s) 309, 715, 942
CviAII CATG 1 cut(s) 736
CviQI GTAC 3 cut(s) 309, 715, 942
DdeI CTNAG 2 cut(s) 338, 938
DpnI GATC 8 cut(s) 160, 407, 435, 526, 534, 622, 756, 768
DpnII GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
DrdI GACNNNNNNGTC 1 cut(s) 659
DseDI GACNNNNNNGTC 1 cut(s) 659
EaeI YGGCCR 2 cut(s) 77, 272
EagI CGGCCG 2 cut(s) 77, 272
EciI GGCGGA 3 cut(s) 214, 398, 537
Ecl136II GAGCTC 2 cut(s) 18, 904
EclXI CGGCCG 2 cut(s) 77, 272
Eco130I CCWWGG 2 cut(s) 35, 735
Eco24I GRGCYC 3 cut(s) 20, 128, 906
Eco47I GGWCC 2 cut(s) 545, 593
Eco52I CGGCCG 2 cut(s) 77, 272
Eco53kI GAGCTC 2 cut(s) 18, 904
Eco88I CYCGRG 5 cut(s) 347, 389, 478, 867, 899
Eco91I GGTNACC 1 cut(s) 812
EcoICRI GAGCTC 2 cut(s) 18, 904
EcoO109I RGGNCCY 1 cut(s) 352
EcoO65I GGTNACC 1 cut(s) 812
EcoRI GAATTC 1 cut(s) 670
EcoT14I CCWWGG 2 cut(s) 35, 735
EcoT38I GRGCYC 3 cut(s) 20, 128, 906
ErhI CCWWGG 2 cut(s) 35, 735
FaeI CATG 1 cut(s) 739
FaiI YATR 4 cut(s) 363, 737, 795, 846
FaqI GGGAC 4 cut(s) 168, 461, 579, 770
FatI CATG 1 cut(s) 735
FauI CCCGC 2 cut(s) 507, 556
FblI GTMKAC 2 cut(s) 136, 663
Fnu4HI GCNGC 4 cut(s) 68, 104, 112, 418
FokI GGATG 6 cut(s) 18, 506, 575, 642, 718, 842
FriOI GRGCYC 3 cut(s) 20, 128, 906
Fsp4HI GCNGC 4 cut(s) 68, 104, 112, 418
GlaI GCGC 3 cut(s) 100, 102, 421
GluI GCNGC 4 cut(s) 68, 104, 112, 418
HaeIII GGCC 6 cut(s) 79, 274, 354, 431, 872, 909
HapII CCGG 7 cut(s) 11, 76, 80, 183, 248, 275, 860
HgaI GACGC 1 cut(s) 368
HhaI GCGC 3 cut(s) 101, 103, 422
Hin1I GRCGYC 1 cut(s) 59
Hin1II CATG 1 cut(s) 739
Hin6I GCGC 3 cut(s) 99, 101, 420
HinP1I GCGC 3 cut(s) 99, 101, 420
HincII GTYRAC 3 cut(s) 137, 664, 728
HindII GTYRAC 3 cut(s) 137, 664, 728
HinfI GANTC 5 cut(s) 130, 319, 342, 397, 573
HpaII CCGG 7 cut(s) 11, 76, 80, 183, 248, 275, 860
HphI GGTGA 2 cut(s) 197, 672
Hpy166II GTNNAC 4 cut(s) 94, 137, 664, 728
Hpy188I TCNGA 7 cut(s) 26, 64, 163, 464, 507, 545, 922
Hpy188III TCNNGA 5 cut(s) 389, 401, 478, 530, 899
Hpy8I GTNNAC 4 cut(s) 94, 137, 664, 728
Hpy99I CGWCG 5 cut(s) 61, 64, 138, 141, 665
HpyAV CCTTC 5 cut(s) 158, 491, 719, 786, 829
HpyCH4III ACNGT 4 cut(s) 121, 308, 883, 946
HpyCH4IV ACGT 4 cut(s) 59, 90, 448, 510
HpyCH4V TGCA 2 cut(s) 114, 793
HpyF10VI GCNNNNNNNGC 3 cut(s) 76, 417, 428
HpyF3I CTNAG 2 cut(s) 338, 938
HpySE526I ACGT 4 cut(s) 59, 90, 448, 510
Hsp92I GRCGYC 1 cut(s) 59
Hsp92II CATG 1 cut(s) 739
HspAI GCGC 3 cut(s) 99, 101, 420
KpnI GGTACC 1 cut(s) 312
KroI GCCGGC 1 cut(s) 274
KroNI GCCGGC 1 cut(s) 276
Kzo9I GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
LmnI GCTCC 5 cut(s) 4, 64, 201, 611, 922
LpnPI CCDG 8 cut(s) 24, 89, 93, 196, 261, 288, 795, 873
Lsp1109I GCAGC 2 cut(s) 98, 404
MaeII ACGT 4 cut(s) 59, 90, 448, 510
MaeIII GTNAC 2 cut(s) 812, 874
MalI GATC 8 cut(s) 160, 407, 435, 526, 534, 622, 756, 768
MboI GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
MboII GAAGA 2 cut(s) 446, 578
MflI RGATCY 3 cut(s) 405, 524, 620
MhlI GDGCHC 3 cut(s) 20, 128, 906
MluCI AATT 4 cut(s) 71, 226, 553, 670
MlyI GAGTC 2 cut(s) 313, 582
MmeI TCCRAC 2 cut(s) 42, 407
MroNI GCCGGC 1 cut(s) 274
MroXI GAANNNNTTC 2 cut(s) 501, 775
MseI TTAA 1 cut(s) 375
MslI CAYNNNNRTG 2 cut(s) 119, 860
MspI CCGG 7 cut(s) 11, 76, 80, 183, 248, 275, 860
MspR9I CCNGG 2 cut(s) 249, 860
Mva1269I GAATGC 1 cut(s) 501
MvnI CGCG 3 cut(s) 99, 101, 422
MwoI GCNNNNNNNGC 3 cut(s) 76, 417, 428
NaeI GCCGGC 1 cut(s) 276
NciI CCSGG 2 cut(s) 249, 860
NcoI CCATGG 1 cut(s) 735
NdeII GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
NgoMIV GCCGGC 1 cut(s) 274
NlaIII CATG 1 cut(s) 739
NlaIV GGNNCC 9 cut(s) 66, 285, 310, 461, 547, 595, 613, 622, 924
NmeAIII GCCGAG 3 cut(s) 313, 393, 885
OliI CACNNNNGTG 1 cut(s) 119
PaeR7I CTCGAG 2 cut(s) 347, 899
PauI GCGCGC 1 cut(s) 99
PcsI WCGNNNNNNNCGW 2 cut(s) 139, 926
PctI GAATGC 1 cut(s) 501
PdiI GCCGGC 1 cut(s) 276
PdmI GAANNNNTTC 2 cut(s) 501, 775
PfeI GAWTC 3 cut(s) 130, 342, 397
PkrI GCNGC 4 cut(s) 69, 105, 113, 419
Ple19I CGATCG 2 cut(s) 161, 436
PleI GAGTC 2 cut(s) 313, 581
PpsI GAGTC 2 cut(s) 313, 581
Psp124BI GAGCTC 2 cut(s) 20, 906
PspEI GGTNACC 1 cut(s) 812
PspN4I GGNNCC 9 cut(s) 66, 285, 310, 461, 547, 595, 613, 622, 924
PspPI GGNCC 5 cut(s) 352, 429, 545, 593, 870
PspXI VCTCGAGB 1 cut(s) 347
PsuI RGATCY 3 cut(s) 405, 524, 620
PteI GCGCGC 1 cut(s) 99
PvuI CGATCG 2 cut(s) 161, 436
RsaI GTAC 3 cut(s) 310, 716, 943
RsaNI GTAC 3 cut(s) 309, 715, 942
RseI CAYNNNNRTG 2 cut(s) 119, 860
SacI GAGCTC 2 cut(s) 20, 906
SalI GTCGAC 2 cut(s) 135, 662
SaqAI TTAA 1 cut(s) 375
SatI GCNGC 4 cut(s) 68, 104, 112, 418
Sau3AI GATC 8 cut(s) 158, 405, 433, 524, 532, 620, 754, 766
Sau96I GGNCC 5 cut(s) 352, 429, 545, 593, 870
SchI GAGTC 2 cut(s) 313, 582
ScrFI CCNGG 2 cut(s) 249, 860
SduI GDGCHC 3 cut(s) 20, 128, 906
Sfr274I CTCGAG 2 cut(s) 347, 899
SgrAI CRCCGGYG 1 cut(s) 182
SgrDI CGTCGACG 1 cut(s) 135
SinI GGWCC 2 cut(s) 545, 593
SlaI CTCGAG 2 cut(s) 347, 899
SmiMI CAYNNNNRTG 2 cut(s) 119, 860
SmlI CTYRAG 4 cut(s) 347, 471, 890, 899
SmoI CTYRAG 4 cut(s) 347, 471, 890, 899
Sse9I AATT 4 cut(s) 71, 226, 553, 670
SstI GAGCTC 2 cut(s) 20, 906
StyD4I CCNGG 2 cut(s) 247, 858
StyI CCWWGG 2 cut(s) 35, 735
TaaI ACNGT 4 cut(s) 121, 308, 883, 946
TaiI ACGT 4 cut(s) 62, 93, 451, 513
TasI AATT 4 cut(s) 71, 226, 553, 670
TauI GCSGC 2 cut(s) 70, 106
TfiI GAWTC 3 cut(s) 130, 342, 397
Tru1I TTAA 1 cut(s) 375
Tru9I TTAA 1 cut(s) 375
TseI GCWGC 2 cut(s) 111, 417
TspDTI ATGAA 2 cut(s) 510, 579
TspGWI ACGGA 4 cut(s) 506, 575, 624, 735
VpaK11BI GGWCC 2 cut(s) 545, 593
XapI RAATTY 3 cut(s) 226, 553, 670
XhoI CTCGAG 2 cut(s) 347, 899
XmiI GTMKAC 2 cut(s) 136, 663
XmnI GAANNNNTTC 2 cut(s) 501, 775
ZraI GACGTC 1 cut(s) 60
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.