FvH4_4g16921

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000270
Physical Location & Seq
Forward (+)
20866613 .. 20868347
1735 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g16921.t1

Sequence Viewer

Length: 1407 bp
ATGATGGAGAAATATATGTTAGAGCCATTGATGAAATCATCATCAGGTGGATCCTCATTGTTGATGAGAACTAAGAATATTGATGACCTCCCGGACGTTTTACTGGTTGAAATTCTGTGCCGCCTTCCCTGCAATAAACTCATATTCCAATGCAAGCTTGTGTCCAAGCCTTGGTACAACCTCATATCTGCTCCTTACTTTGTTCGCCGCTATCTGTGCCTCCAACGTCAAATGCAGAAACCTGTTCTTCTAGCAACTCTAGTTCGATTGAATGTAGGTATCCCTGGGAAACCTCTCATCATAACGTCGGATCATCCGGTCTTCAAAACAGCAGCTTCAAGCAATTTCACTCTTAATTTCCTCCCATGCTATAGCCAAGCCAAACAAGTAGAAGAACCAGGTTCCTGGGGTGCACCTGTCGTGGTAGGGACTCATAATGACTTGGTTTTGTGCTGCGCAACCAAGAACTATCAACGTGACTACTACCTTTGTAATCCATACACCAAACAATGGGTTTCTCTCCCTCGCACCCCTCAGGTCTACCGCAACGCGCTTGTTGGCTTTGTATGTGATCCATATTTCAAGTACTACTCCTCAGATCATCATAATGGGGAAGAAGAAGAACGTAGCACTTCTTTCATTGTTGATGCTGAGTACAAATGGAAGGTTGTGGGGGTAATATTGAATCCATCAGATACCAACTTTCGTTTGGAGATCTTCTCTTCTGAGACCCGTCAATGGGGAGAGAGATTTGTAGAATGTTCTCAGCCATTTTCTTCATTTGCCTGTGATGACTTCTTTGATAACACCCGGAAACCTAGATCTTCGTTAGCTTCCGTGGCTTACAAAGGAATGTTGTACTGGTGGTGCGAGAAGGACCTTATACTTGAGTTGGATGTGTCCGATTCAAACATACCTAAGTACCGTTTCATTGAACTCCTTGAGAATTTTGAAAGTACTGTTGGATTAGGGGTTCCAGGAGTGGGCGGAGGGCGTTTACAGTTGTGCATGCATGAAGAATATCTCTCTAGAGATCACGATGAGGTTCAGAAGGTATTTAGAGTTAGAGAGTTGAAACAAGTTGTCAAGGACAGGCAAGGCAAACTCAAATGGTTAGCCGACCGTGTTACTATAGTTTCCGAATCCAAAGATATTGAGGTCTACCCTCGACCGTTTACAAACCCAAATATATTAGCTTTCCACCCAAACAATGAAGACGTCGTGTATTTGACTACTGAAGCTGGCTGCAAAATTTTCACGTGCAGCCTTCGTGAAGGAACATTAAGGGAAATTTCCAAGCTCGAGGTTTCCAAGCTCGAGGCTCCGATAAGGGGATCGAAGAAGACATTCAGCTACTCGTTTTCTCTCCCATGGTGGCCAACCCCTGTTCCTAAGACTCTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

469

Amino Acids

53.85

Weight (kDa)

8.06

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 27 - 68 1.7e-06 F-box domain
b-prop_At3g26010-like PF24750 141 - 428 7.2e-08 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1221
Acc16I TGCGCA 1 cut(s) 457
AccB7I CCANNNNNTGG 2 cut(s) 171, 510
AccI GTMKAC 2 cut(s) 540, 1161
AccII CGCG 1 cut(s) 551
AciI CCGC 4 cut(s) 121, 208, 544, 987
AclWI GGATC 5 cut(s) 45, 58, 318, 566, 1342
AcoI YGGCCR 1 cut(s) 1376
AcsI RAATTY 4 cut(s) 111, 946, 1251, 1290
AcuI CTGAAG 1 cut(s) 1257
AcvI CACGTG 1 cut(s) 1260
AcyI GRCGYC 1 cut(s) 1218
AfaI GTAC 6 cut(s) 176, 587, 656, 860, 923, 958
AfiI CCNNNNNNNGG 6 cut(s) 171, 510, 738, 739, 983, 1331
AjnI CCWGG 4 cut(s) 283, 397, 404, 976
AjuI GAANNNNNNNTTGG 2 cut(s) 945, 977
AloI GAACNNNNNNTCC 2 cut(s) 957, 989
AluBI AGCT 8 cut(s) 157, 335, 833, 1196, 1241, 1300, 1315, 1353
AluI AGCT 8 cut(s) 157, 335, 833, 1196, 1241, 1300, 1315, 1353
Alw21I GWGCWC 1 cut(s) 415
Alw26I GTCTC 1 cut(s) 722
Alw44I GTGCAC 1 cut(s) 411
AlwI GGATC 5 cut(s) 45, 58, 318, 566, 1342
Ama87I CYCGRG 2 cut(s) 1301, 1316
AoxI GGCC 1 cut(s) 1376
ApaLI GTGCAC 1 cut(s) 411
ApeKI GCWGC 4 cut(s) 332, 453, 1245, 1263
ApoI RAATTY 4 cut(s) 111, 946, 1251, 1290
Asp700I GAANNNNTTC 1 cut(s) 1346
AspLEI GCGC 2 cut(s) 458, 553
AspS9I GGNCC 1 cut(s) 877
AsuC2I CCSGG 2 cut(s) 92, 811
AvaI CYCGRG 2 cut(s) 1301, 1316
AvaII GGWCC 1 cut(s) 877
AxyI CCTNAGG 1 cut(s) 534
BaeGI GKGCMC 1 cut(s) 415
BaeI ACNNNNGTAYC 2 cut(s) 905, 938
BalI TGGCCA 1 cut(s) 1378
BamHI GGATCC 1 cut(s) 50
BbrPI CACGTG 1 cut(s) 1260
BbsI GAAGAC 3 cut(s) 313, 1221, 1349
Bbv12I GWGCWC 1 cut(s) 415
BbvI GCAGC 4 cut(s) 344, 440, 1232, 1275
BccI CCATC 1 cut(s) 697
BciT130I CCWGG 4 cut(s) 285, 399, 406, 978
BciVI GTATCC 1 cut(s) 290
BcnI CCSGG 2 cut(s) 92, 811
BcoDI GTCTC 1 cut(s) 722
BfaI CTAG 5 cut(s) 251, 260, 819, 1029, 1400
BfmI CTRYAG 2 cut(s) 370, 1131
BfuI GTATCC 1 cut(s) 290
BglII AGATCT 2 cut(s) 714, 821
BisI GCNGC 6 cut(s) 121, 208, 333, 454, 1246, 1264
BlsI GCNGC 6 cut(s) 122, 209, 334, 455, 1247, 1265
BmcAI AGTACT 2 cut(s) 587, 958
Bme1390I CCNGG 6 cut(s) 92, 285, 399, 406, 811, 978
Bme18I GGWCC 1 cut(s) 877
BmeT110I CYCGRG 2 cut(s) 1301, 1316
BmgT120I GGNCC 1 cut(s) 877
BmiI GGNNCC 4 cut(s) 52, 403, 975, 1323
BmrFI CCNGG 6 cut(s) 92, 285, 399, 406, 811, 978
BmsI GCATC 1 cut(s) 637
BpiI GAAGAC 3 cut(s) 313, 1221, 1349
BplI GAGNNNNNCTC 2 cut(s) 704, 736
BpuEI CTTGAG 2 cut(s) 908, 962
BpuMI CCSGG 2 cut(s) 92, 811
BsaAI YACGTR 1 cut(s) 1260
BsaHI GRCGYC 1 cut(s) 1218
BsaI GGTCTC 1 cut(s) 722
BsaJI CCNNGG 6 cut(s) 170, 283, 284, 405, 837, 1370
BsaWI WCCGGW 1 cut(s) 316
Bsc4I CCNNNNNNNGG 6 cut(s) 171, 510, 738, 739, 983, 1331
Bse1I ACTGG 2 cut(s) 108, 866
Bse21I CCTNAGG 1 cut(s) 534
BseBI CCWGG 4 cut(s) 285, 399, 406, 978
BseDI CCNNGG 6 cut(s) 170, 283, 284, 405, 837, 1370
BseGI GGATG 2 cut(s) 313, 901
BseLI CCNNNNNNNGG 6 cut(s) 171, 510, 738, 739, 983, 1331
BseMII CTCAG 5 cut(s) 548, 609, 642, 717, 779
BseNI ACTGG 2 cut(s) 108, 866
BseRI GAGGAG 1 cut(s) 583
BseSI GKGCMC 1 cut(s) 415
BseXI GCAGC 4 cut(s) 344, 440, 1232, 1275
BsgI GTGCAG 1 cut(s) 1282
Bsh1236I CGCG 1 cut(s) 551
Bsh1285I CGRYCG 2 cut(s) 1123, 1172
BshFI GGCC 1 cut(s) 1378
BsiEI CGRYCG 2 cut(s) 1123, 1172
BsiHKAI GWGCWC 1 cut(s) 415
BsiHKCI CYCGRG 2 cut(s) 1301, 1316
BsiSI CCGG 3 cut(s) 92, 317, 811
BslFI GGGAC 1 cut(s) 442
BslI CCNNNNNNNGG 6 cut(s) 171, 510, 738, 739, 983, 1331
BsmAI GTCTC 1 cut(s) 722
BsmFI GGGAC 1 cut(s) 442
BsnI GGCC 1 cut(s) 1378
Bso31I GGTCTC 1 cut(s) 722
BsoBI CYCGRG 2 cut(s) 1301, 1316
Bsp1286I GDGCHC 1 cut(s) 415
Bsp143I GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
Bsp19I CCATGG 1 cut(s) 1370
BspACI CCGC 4 cut(s) 121, 208, 544, 987
BspANI GGCC 1 cut(s) 1378
BspCNI CTCAG 5 cut(s) 547, 608, 643, 718, 778
BspFNI CGCG 1 cut(s) 551
BspLI GGNNCC 4 cut(s) 52, 403, 975, 1323
BspPI GGATC 5 cut(s) 45, 58, 318, 566, 1342
BspTNI GGTCTC 1 cut(s) 722
BsrI ACTGG 2 cut(s) 108, 866
BssECI CCNNGG 6 cut(s) 170, 283, 284, 405, 837, 1370
BssMI GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
BssNI GRCGYC 1 cut(s) 1218
BssT1I CCWWGG 2 cut(s) 170, 1370
Bst2UI CCWGG 4 cut(s) 285, 399, 406, 978
Bst4CI ACNGT 5 cut(s) 926, 961, 1002, 1124, 1173
Bst6I CTCTTC 1 cut(s) 727
BstACI GRCGYC 1 cut(s) 1218
BstBAI YACGTR 1 cut(s) 1260
BstC8I GCNNGC 3 cut(s) 155, 1010, 1243
BstDEI CTNAG 8 cut(s) 72, 534, 595, 651, 726, 765, 918, 1392
BstDSI CCRYGG 2 cut(s) 837, 1370
BstF5I GGATG 2 cut(s) 313, 901
BstFNI CGCG 1 cut(s) 551
BstHHI GCGC 2 cut(s) 458, 553
BstKTI GATC 8 cut(s) 53, 313, 574, 601, 717, 824, 1036, 1337
BstMAI GTCTC 1 cut(s) 722
BstMBI GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
BstMCI CGRYCG 2 cut(s) 1123, 1172
BstMWI GCNNNNNNNGC 3 cut(s) 129, 216, 839
BstNI CCWGG 4 cut(s) 285, 399, 406, 978
BstNSI RCATGY 1 cut(s) 1012
BstSCI CCNGG 6 cut(s) 90, 283, 397, 404, 809, 976
BstSFI CTRYAG 2 cut(s) 370, 1131
BstSLI GKGCMC 1 cut(s) 415
BstUI CGCG 1 cut(s) 551
BstV1I GCAGC 4 cut(s) 344, 440, 1232, 1275
BstV2I GAAGAC 3 cut(s) 313, 1221, 1349
BstX2I RGATCY 3 cut(s) 50, 714, 821
BstXI CCANNNNNNTGG 1 cut(s) 405
BstYI RGATCY 3 cut(s) 50, 714, 821
Bsu36I CCTNAGG 1 cut(s) 534
BsuI GTATCC 1 cut(s) 290
BsuRI GGCC 1 cut(s) 1378
BtgI CCRYGG 2 cut(s) 837, 1370
BtsCI GGATG 2 cut(s) 313, 901
Cac8I GCNNGC 3 cut(s) 155, 1010, 1243
CfoI GCGC 2 cut(s) 458, 553
Cfr13I GGNCC 1 cut(s) 877
CsiI ACCWGGT 1 cut(s) 397
Csp6I GTAC 6 cut(s) 175, 586, 655, 859, 922, 957
CviAII CATG 4 cut(s) 366, 1009, 1013, 1371
CviQI GTAC 6 cut(s) 175, 586, 655, 859, 922, 957
DdeI CTNAG 8 cut(s) 72, 534, 595, 651, 726, 765, 918, 1392
DpnI GATC 8 cut(s) 52, 312, 573, 600, 716, 823, 1035, 1336
DpnII GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
EaeI YGGCCR 1 cut(s) 1376
Eam1104I CTCTTC 1 cut(s) 727
EarI CTCTTC 1 cut(s) 727
EciI GGCGGA 1 cut(s) 1002
Eco130I CCWWGG 2 cut(s) 170, 1370
Eco31I GGTCTC 1 cut(s) 722
Eco47I GGWCC 1 cut(s) 877
Eco57I CTGAAG 1 cut(s) 1257
Eco72I CACGTG 1 cut(s) 1260
Eco81I CCTNAGG 1 cut(s) 534
Eco88I CYCGRG 2 cut(s) 1301, 1316
EcoO109I RGGNCCY 1 cut(s) 877
EcoRII CCWGG 4 cut(s) 283, 397, 404, 976
EcoT14I CCWWGG 2 cut(s) 170, 1370
EcoT22I ATGCAT 1 cut(s) 1014
ErhI CCWWGG 2 cut(s) 170, 1370
FaeI CATG 4 cut(s) 369, 1012, 1016, 1374
FaqI GGGAC 1 cut(s) 442
FatI CATG 4 cut(s) 365, 1008, 1012, 1370
FblI GTMKAC 2 cut(s) 540, 1161
Fnu4HI GCNGC 6 cut(s) 121, 208, 333, 454, 1246, 1264
FokI GGATG 2 cut(s) 300, 908
Fsp4HI GCNGC 6 cut(s) 121, 208, 333, 454, 1246, 1264
FspBI CTAG 5 cut(s) 251, 260, 819, 1029, 1400
FspI TGCGCA 1 cut(s) 457
GlaI GCGC 2 cut(s) 457, 552
GluI GCNGC 6 cut(s) 121, 208, 333, 454, 1246, 1264
HaeIII GGCC 1 cut(s) 1378
HapII CCGG 3 cut(s) 92, 317, 811
HhaI GCGC 2 cut(s) 458, 553
Hin1I GRCGYC 1 cut(s) 1218
Hin1II CATG 4 cut(s) 369, 1012, 1016, 1374
Hin6I GCGC 2 cut(s) 456, 551
HinP1I GCGC 2 cut(s) 456, 551
HindIII AAGCTT 1 cut(s) 155
HinfI GANTC 5 cut(s) 430, 685, 905, 1142, 1396
HpaII CCGG 3 cut(s) 92, 317, 811
Hpy166II GTNNAC 5 cut(s) 413, 541, 998, 1162, 1176
Hpy188I TCNGA 8 cut(s) 310, 598, 694, 727, 904, 1050, 1141, 1326
Hpy188III TCNNGA 4 cut(s) 1029, 1037, 1271, 1400
Hpy8I GTNNAC 5 cut(s) 413, 541, 998, 1162, 1176
Hpy99I CGWCG 2 cut(s) 310, 1223
HpyAV CCTTC 6 cut(s) 134, 658, 868, 1045, 1268, 1277
HpyCH4III ACNGT 5 cut(s) 926, 961, 1002, 1124, 1173
HpyCH4IV ACGT 7 cut(s) 96, 226, 305, 475, 625, 1218, 1259
HpyCH4V TGCA 8 cut(s) 132, 153, 235, 413, 1008, 1012, 1248, 1263
HpyF10VI GCNNNNNNNGC 3 cut(s) 129, 216, 839
HpyF3I CTNAG 8 cut(s) 72, 534, 595, 651, 726, 765, 918, 1392
HpySE526I ACGT 7 cut(s) 96, 226, 305, 475, 625, 1218, 1259
Hsp92I GRCGYC 1 cut(s) 1218
Hsp92II CATG 4 cut(s) 369, 1012, 1016, 1374
HspAI GCGC 2 cut(s) 456, 551
Kzo9I GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
LmnI GCTCC 2 cut(s) 196, 1327
Lsp1109I GCAGC 4 cut(s) 344, 440, 1232, 1275
LweI GCATC 1 cut(s) 637
MabI ACCWGGT 1 cut(s) 397
MaeI CTAG 5 cut(s) 251, 260, 819, 1029, 1400
MaeII ACGT 7 cut(s) 96, 226, 305, 475, 625, 1218, 1259
MaeIII GTNAC 2 cut(s) 476, 1126
MalI GATC 8 cut(s) 52, 312, 573, 600, 716, 823, 1035, 1336
MboI GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
MflI RGATCY 3 cut(s) 50, 714, 821
MhlI GDGCHC 1 cut(s) 415
MlsI TGGCCA 1 cut(s) 1378
MluCI AATT 6 cut(s) 111, 343, 355, 946, 1251, 1290
MluNI TGGCCA 1 cut(s) 1378
MlyI GAGTC 2 cut(s) 424, 1390
MmeI TCCRAC 4 cut(s) 247, 288, 873, 943
Mox20I TGGCCA 1 cut(s) 1378
Mph1103I ATGCAT 1 cut(s) 1014
MroXI GAANNNNTTC 1 cut(s) 1346
MscI TGGCCA 1 cut(s) 1378
MseI TTAA 2 cut(s) 354, 1283
MslI CAYNNNNRTG 1 cut(s) 606
Msp20I TGGCCA 1 cut(s) 1378
MspI CCGG 3 cut(s) 92, 317, 811
MspR9I CCNGG 6 cut(s) 92, 285, 399, 406, 811, 978
MvaI CCWGG 4 cut(s) 285, 399, 406, 978
MvnI CGCG 1 cut(s) 551
MwoI GCNNNNNNNGC 3 cut(s) 129, 216, 839
NciI CCSGG 2 cut(s) 92, 811
NcoI CCATGG 1 cut(s) 1370
NdeII GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
NlaIII CATG 4 cut(s) 369, 1012, 1016, 1374
NlaIV GGNNCC 4 cut(s) 52, 403, 975, 1323
NmuCI GTSAC 1 cut(s) 476
NsbI TGCGCA 1 cut(s) 457
NsiI ATGCAT 1 cut(s) 1014
NspI RCATGY 1 cut(s) 1012
PaeI GCATGC 1 cut(s) 1012
PaeR7I CTCGAG 2 cut(s) 1301, 1316
PasI CCCWGGG 1 cut(s) 284
PdmI GAANNNNTTC 1 cut(s) 1346
PfeI GAWTC 3 cut(s) 685, 905, 1142
PflMI CCANNNNNTGG 2 cut(s) 171, 510
PfoI TCCNGGA 2 cut(s) 90, 976
PkrI GCNGC 6 cut(s) 122, 209, 334, 455, 1247, 1265
PleI GAGTC 2 cut(s) 424, 1390
PmaCI CACGTG 1 cut(s) 1260
PmlI CACGTG 1 cut(s) 1260
PpsI GAGTC 2 cut(s) 424, 1390
Ppu21I YACGTR 1 cut(s) 1260
PpuMI RGGWCCY 1 cut(s) 877
Psp5II RGGWCCY 1 cut(s) 877
Psp6I CCWGG 4 cut(s) 283, 397, 404, 976
PspCI CACGTG 1 cut(s) 1260
PspGI CCWGG 4 cut(s) 283, 397, 404, 976
PspN4I GGNNCC 4 cut(s) 52, 403, 975, 1323
PspPI GGNCC 1 cut(s) 877
PspPPI RGGWCCY 1 cut(s) 877
PspXI VCTCGAGB 2 cut(s) 1301, 1316
PsuI RGATCY 3 cut(s) 50, 714, 821
RsaI GTAC 6 cut(s) 176, 587, 656, 860, 923, 958
RsaNI GTAC 6 cut(s) 175, 586, 655, 859, 922, 957
RseI CAYNNNNRTG 1 cut(s) 606
SaqAI TTAA 2 cut(s) 354, 1283
SatI GCNGC 6 cut(s) 121, 208, 333, 454, 1246, 1264
Sau3AI GATC 8 cut(s) 50, 310, 571, 598, 714, 821, 1033, 1334
Sau96I GGNCC 1 cut(s) 877
ScaI AGTACT 2 cut(s) 587, 958
SchI GAGTC 2 cut(s) 424, 1390
ScrFI CCNGG 6 cut(s) 92, 285, 399, 406, 811, 978
SduI GDGCHC 1 cut(s) 415
SexAI ACCWGGT 1 cut(s) 397
SfaNI GCATC 1 cut(s) 637
SfcI CTRYAG 2 cut(s) 370, 1131
Sfr274I CTCGAG 2 cut(s) 1301, 1316
SinI GGWCC 1 cut(s) 877
SlaI CTCGAG 2 cut(s) 1301, 1316
SmiMI CAYNNNNRTG 1 cut(s) 606
SmlI CTYRAG 4 cut(s) 887, 941, 1301, 1316
SmoI CTYRAG 4 cut(s) 887, 941, 1301, 1316
SphI GCATGC 1 cut(s) 1012
Sse9I AATT 6 cut(s) 111, 343, 355, 946, 1251, 1290
SsiI CCGC 4 cut(s) 121, 208, 544, 987
SspI AATATT 2 cut(s) 79, 681
SspMI CTAG 5 cut(s) 251, 260, 819, 1029, 1400
StyD4I CCNGG 6 cut(s) 90, 283, 397, 404, 809, 976
StyI CCWWGG 2 cut(s) 170, 1370
TaaI ACNGT 5 cut(s) 926, 961, 1002, 1124, 1173
TaiI ACGT 7 cut(s) 99, 229, 308, 478, 628, 1221, 1262
TaqI TCGA 5 cut(s) 265, 1168, 1302, 1317, 1337
TasI AATT 6 cut(s) 111, 343, 355, 946, 1251, 1290
TatI WGTACW 4 cut(s) 585, 654, 858, 956
TauI GCSGC 2 cut(s) 123, 210
TfiI GAWTC 3 cut(s) 685, 905, 1142
Tru1I TTAA 2 cut(s) 354, 1283
Tru9I TTAA 2 cut(s) 354, 1283
TseFI GTSAC 1 cut(s) 476
TseI GCWGC 4 cut(s) 332, 453, 1245, 1263
Tsp45I GTSAC 1 cut(s) 476
TspDTI ATGAA 6 cut(s) 47, 628, 768, 919, 1029, 1227
TspGWI ACGGA 1 cut(s) 826
Van91I CCANNNNNTGG 2 cut(s) 171, 510
VneI GTGCAC 1 cut(s) 411
VpaK11BI GGWCC 1 cut(s) 877
XapI RAATTY 4 cut(s) 111, 946, 1251, 1290
XbaI TCTAGA 2 cut(s) 1028, 1399
XceI RCATGY 1 cut(s) 1012
XcmI CCANNNNNNNNNTGG 1 cut(s) 706
XhoI CTCGAG 2 cut(s) 1301, 1316
XmiI GTMKAC 2 cut(s) 540, 1161
XmnI GAANNNNTTC 1 cut(s) 1346
XspI CTAG 5 cut(s) 251, 260, 819, 1029, 1400
ZraI GACGTC 1 cut(s) 1219
ZrmI AGTACT 2 cut(s) 587, 958
Zsp2I ATGCAT 1 cut(s) 1014
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.