Rh3AG022000

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
OG0000270
Physical Location & Seq
Forward (+)
1472371 .. 1473729
1359 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG022000.1

Sequence Viewer

Length: 1359 bp
ATGATTCCCTATAGGTATGCAAAGCATAAGACTTTGGTCCTCACCATGTCATCCGAGCCTCCTCCTCCTCCTCTGTTAGAAGCCAGCATATCAAGCATTTTCTCTTTCCTCCCTTGTTTTCAAGGCCATGAATATGCCGAGAAGGGCGATAAGCTATATGTGACAGGGACTTATAATGACTTGGTCTTGTGCTCGCCAACTAAAACTGCTGAACGTGATTACTACATATGCAACTCCTACACCAAGGAATGGATTCGTCTTCCTCCCCCCCGTTATAGACATTATTCTGATGATTTAGCAGTATCGGCAGGATTCATTTGTGATCCCTACTGCAATATTAAGGAAGACGATACTAGTAGCAACAGCGCTATCATCAAGGTTAATGCCGAGTATAGGTGCAGGATTGTGCGAATACTTCCTAACCAAGATTACAAGGGATTTGATGTGGAGATATATTCTTCCGAGACTGGTGAATGGAGGGAGTATCCATCGTCTAAGATATTATGCCAACAACGATCCTATACTACTTTTCGGTGTCCAAGCGTTGCTTGCAATGGAAAGCTGTATTGGCTGAATGACCAAGGCTCTGTTTTTGAGTTGGATCCGTTCAATATTTGTACTGGCGATGTTATTGATAAATGTCGTTTCATTGATGCACCGACCCCAGATGCACATAATTTATGTTGGCATATGGGTCTTTGTCAAGGGCGTTTGCGGATGTGCCCGTTTTTCTTTTATTGTTCTGCTAGTTATCCTATAACTATTTGGGAGTTGAAAGAAAACCAAGTGGATGGGAAACCAGAATGGTGTTTACTTCATCAAATATCTTCCCTGTCAGAGATGGTTGCAAAACAACCTTTCATCACTTTACATTTTGCAATCGTAGATTTCCACCCAGTTCATGGGGATATAGTGTACTTACAAAATAACGATATATATAGTGAGCCAAGATACATAGTCACGTGCAATGTTCGCGAAAGAACATTAGAGATAGCTACAAAAATTCCATTTGAGAATAGTCCTGGATACGCTTGGGCCCCTGAGCAGATTTGCCACAATGTGATCCCATGGTGGCCAACACCAATTCCAAAAAGACTAAACTACCACGAGGAGTACCTAAATATCACTGTGATTAGTGTAGACATCTTTACTATTAAGGTAGGTTGCTTAAGTAATGTTAAGCAATTGAAACAAAAAATTGAAGAGAAGAAAGGGCCTGGGCAGCATGAACTACATTTTGATGGGCGAGTTTTAGAAGATGATGACAAGTGGCTTGCAGATTATGGAATCAAGGACAAATCTAAGATTTACATTGGCGAACATTGTTCAAAAGAGTGGCTTGTGTCAGAGCCTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

452

Amino Acids

52.36

Weight (kDa)

5.78

Isoelectric Point (pI)

38.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
b-prop_At3g26010-like PF24750 46 - 333 9.6e-18 F-box protein At3g26010-like, beta-propeller
ubiquitin PF00240 374 - 436 6e-09 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 174
AccB7I CCANNNNNTGG 2 cut(s) 249, 902
AccI GTMKAC 1 cut(s) 1140
AccII CGCG 1 cut(s) 975
AciI CCGC 1 cut(s) 715
AclWI GGATC 5 cut(s) 317, 510, 596, 609, 1057
AcoI YGGCCR 1 cut(s) 1073
AcsI RAATTY 1 cut(s) 1002
AcvI CACGTG 1 cut(s) 963
AdeI CACNNNGTG 1 cut(s) 1060
AfaI GTAC 3 cut(s) 619, 917, 1115
AfeI AGCGCT 1 cut(s) 367
AfiI CCNNNNNNNGG 3 cut(s) 249, 393, 902
AflII CTTAAG 1 cut(s) 1168
AgsI TTSAA 6 cut(s) 122, 610, 775, 1189, 1202, 1329
AhlI ACTAGT 1 cut(s) 353
AjnI CCWGG 2 cut(s) 1021, 1216
AjuI GAANNNNNNNTTGG 2 cut(s) 550, 582
AluBI AGCT 3 cut(s) 154, 562, 995
AluI AGCT 3 cut(s) 154, 562, 995
Alw21I GWGCWC 1 cut(s) 194
Alw26I GTCTC 1 cut(s) 458
AlwI GGATC 5 cut(s) 317, 510, 596, 609, 1057
Aor51HI AGCGCT 1 cut(s) 367
AoxI GGCC 4 cut(s) 124, 1035, 1073, 1214
ApaI GGGCCC 1 cut(s) 1039
ApeKI GCWGC 1 cut(s) 1222
ApoI RAATTY 1 cut(s) 1002
Asp700I GAANNNNTTC 1 cut(s) 252
AspLEI GCGC 1 cut(s) 368
AspS9I GGNCC 4 cut(s) 37, 1035, 1036, 1214
AsuHPI GGTGA 2 cut(s) 34, 482
AvaII GGWCC 1 cut(s) 37
BaeGI GKGCMC 2 cut(s) 725, 1039
BalI TGGCCA 1 cut(s) 1075
BamHI GGATCC 1 cut(s) 601
BanII GRGCYC 1 cut(s) 1039
BauI CACGAG 1 cut(s) 1106
BbrPI CACGTG 1 cut(s) 963
BbsI GAAGAC 2 cut(s) 251, 351
Bbv12I GWGCWC 1 cut(s) 194
BbvI GCAGC 1 cut(s) 1234
BccI CCATC 4 cut(s) 496, 785, 835, 1235
BciT130I CCWGG 2 cut(s) 1023, 1218
BciVI GTATCC 2 cut(s) 495, 1019
BcoDI GTCTC 1 cut(s) 458
BcuI ACTAGT 1 cut(s) 353
BfaI CTAG 3 cut(s) 354, 747, 1357
BfmI CTRYAG 1 cut(s) 10
BfoI RGCGCY 1 cut(s) 369
BfrI CTTAAG 1 cut(s) 1168
BfuI GTATCC 2 cut(s) 495, 1019
BisI GCNGC 1 cut(s) 1223
BlsI GCNGC 1 cut(s) 1224
Bme1390I CCNGG 2 cut(s) 1023, 1218
Bme18I GGWCC 1 cut(s) 37
BmgT120I GGNCC 4 cut(s) 37, 1035, 1036, 1214
BmiI GGNNCC 3 cut(s) 603, 1037, 1038
BmrFI CCNGG 2 cut(s) 1023, 1218
BmrI ACTGGG 1 cut(s) 890
BmsI GCATC 2 cut(s) 643, 658
BmuI ACTGGG 1 cut(s) 890
BoxI GACNNNNGTC 1 cut(s) 35
BpiI GAAGAC 2 cut(s) 251, 351
Bpu10I CCTNAGC 1 cut(s) 1041
BsaAI YACGTR 1 cut(s) 963
BsaJI CCNNGG 4 cut(s) 243, 580, 1067, 1217
Bsc4I CCNNNNNNNGG 3 cut(s) 249, 393, 902
Bse1I ACTGG 3 cut(s) 472, 625, 896
Bse3DI GCAATG 2 cut(s) 559, 973
BseBI CCWGG 2 cut(s) 1023, 1218
BseDI CCNNGG 4 cut(s) 243, 580, 1067, 1217
BseGI GGATG 3 cut(s) 50, 723, 796
BseLI CCNNNNNNNGG 3 cut(s) 249, 393, 902
BseMI GCAATG 2 cut(s) 559, 973
BseMII CTCAG 1 cut(s) 1032
BseNI ACTGG 3 cut(s) 472, 625, 896
BseRI GAGGAG 5 cut(s) 51, 54, 57, 60, 1124
BseSI GKGCMC 2 cut(s) 725, 1039
BseXI GCAGC 1 cut(s) 1234
BsgI GTGCAG 1 cut(s) 418
Bsh1236I CGCG 1 cut(s) 975
BshFI GGCC 4 cut(s) 126, 1037, 1075, 1216
BsiHKAI GWGCWC 1 cut(s) 194
BslFI GGGAC 1 cut(s) 181
BslI CCNNNNNNNGG 3 cut(s) 249, 393, 902
BsmAI GTCTC 1 cut(s) 458
BsmFI GGGAC 1 cut(s) 181
BsnI GGCC 4 cut(s) 126, 1037, 1075, 1216
Bsp120I GGGCCC 1 cut(s) 1035
Bsp1286I GDGCHC 3 cut(s) 194, 725, 1039
Bsp143I GATC 4 cut(s) 322, 515, 601, 1062
Bsp19I CCATGG 1 cut(s) 1067
Bsp68I TCGCGA 1 cut(s) 975
BspACI CCGC 1 cut(s) 715
BspANI GGCC 4 cut(s) 126, 1037, 1075, 1216
BspCNI CTCAG 1 cut(s) 1033
BspFNI CGCG 1 cut(s) 975
BspLI GGNNCC 3 cut(s) 603, 1037, 1038
BspPI GGATC 5 cut(s) 317, 510, 596, 609, 1057
BspTI CTTAAG 1 cut(s) 1168
BsrDI GCAATG 2 cut(s) 559, 973
BsrI ACTGG 3 cut(s) 472, 625, 896
BssECI CCNNGG 4 cut(s) 243, 580, 1067, 1217
BssMI GATC 4 cut(s) 322, 515, 601, 1062
BssSI CACGAG 1 cut(s) 1106
BssT1I CCWWGG 3 cut(s) 243, 580, 1067
Bst2BI CACGAG 1 cut(s) 1106
Bst2UI CCWGG 2 cut(s) 1023, 1218
Bst4CI ACNGT 1 cut(s) 1129
Bst6I CTCTTC 1 cut(s) 1197
BstAFI CTTAAG 1 cut(s) 1168
BstBAI YACGTR 1 cut(s) 963
BstC8I GCNNGC 4 cut(s) 85, 194, 550, 1275
BstDEI CTNAG 3 cut(s) 495, 1041, 1302
BstDSI CCRYGG 1 cut(s) 1067
BstF5I GGATG 3 cut(s) 50, 723, 796
BstFNI CGCG 1 cut(s) 975
BstH2I RGCGCY 1 cut(s) 369
BstHHI GCGC 1 cut(s) 368
BstKTI GATC 4 cut(s) 325, 518, 604, 1065
BstMAI GTCTC 1 cut(s) 458
BstMBI GATC 4 cut(s) 322, 515, 601, 1062
BstMWI GCNNNNNNNGC 6 cut(s) 93, 305, 549, 568, 972, 1222
BstNI CCWGG 2 cut(s) 1023, 1218
BstPAI GACNNNNGTC 1 cut(s) 35
BstSCI CCNGG 2 cut(s) 1021, 1216
BstSFI CTRYAG 1 cut(s) 10
BstSLI GKGCMC 2 cut(s) 725, 1039
BstUI CGCG 1 cut(s) 975
BstV1I GCAGC 1 cut(s) 1234
BstV2I GAAGAC 2 cut(s) 251, 351
BstX2I RGATCY 1 cut(s) 601
BstXI CCANNNNNNTGG 1 cut(s) 791
BstYI RGATCY 1 cut(s) 601
BsuI GTATCC 2 cut(s) 495, 1019
BsuRI GGCC 4 cut(s) 126, 1037, 1075, 1216
BtgI CCRYGG 1 cut(s) 1067
BtgZI GCGATG 1 cut(s) 639
BtsCI GGATG 3 cut(s) 50, 723, 796
BtsIMutI CAGTG 1 cut(s) 1125
BtuMI TCGCGA 1 cut(s) 975
Cac8I GCNNGC 4 cut(s) 85, 194, 550, 1275
CfoI GCGC 1 cut(s) 368
Cfr13I GGNCC 4 cut(s) 37, 1035, 1036, 1214
Csp6I GTAC 3 cut(s) 618, 916, 1114
CviAII CATG 5 cut(s) 46, 128, 902, 1068, 1226
CviQI GTAC 3 cut(s) 618, 916, 1114
DdeI CTNAG 3 cut(s) 495, 1041, 1302
DpnI GATC 4 cut(s) 324, 517, 603, 1064
DpnII GATC 4 cut(s) 322, 515, 601, 1062
DraIII CACNNNGTG 1 cut(s) 1060
EaeI YGGCCR 1 cut(s) 1073
Eam1104I CTCTTC 1 cut(s) 1197
EarI CTCTTC 1 cut(s) 1197
Eco130I CCWWGG 3 cut(s) 243, 580, 1067
Eco24I GRGCYC 1 cut(s) 1039
Eco47I GGWCC 1 cut(s) 37
Eco47III AGCGCT 1 cut(s) 367
Eco72I CACGTG 1 cut(s) 963
EcoO109I RGGNCCY 2 cut(s) 1036, 1214
EcoRII CCWGG 2 cut(s) 1021, 1216
EcoT14I CCWWGG 3 cut(s) 243, 580, 1067
EcoT38I GRGCYC 1 cut(s) 1039
ErhI CCWWGG 3 cut(s) 243, 580, 1067
FaeI CATG 5 cut(s) 49, 131, 905, 1071, 1229
FalI AAGNNNNNCTT 4 cut(s) 532, 564, 1323, 1355
FaqI GGGAC 1 cut(s) 181
FatI CATG 5 cut(s) 45, 127, 901, 1067, 1225
FauNDI CATATG 2 cut(s) 227, 690
FblI GTMKAC 1 cut(s) 1140
Fnu4HI GCNGC 1 cut(s) 1223
FokI GGATG 3 cut(s) 37, 730, 803
FriOI GRGCYC 1 cut(s) 1039
Fsp4HI GCNGC 1 cut(s) 1223
FspBI CTAG 3 cut(s) 354, 747, 1357
GlaI GCGC 1 cut(s) 367
GluI GCNGC 1 cut(s) 1223
HaeII RGCGCY 1 cut(s) 369
HaeIII GGCC 4 cut(s) 126, 1037, 1075, 1216
HhaI GCGC 1 cut(s) 368
Hin1II CATG 5 cut(s) 49, 131, 905, 1071, 1229
Hin6I GCGC 1 cut(s) 366
HinP1I GCGC 1 cut(s) 366
HinfI GANTC 4 cut(s) 4, 253, 312, 1287
HphI GGTGA 2 cut(s) 34, 482
Hpy166II GTNNAC 3 cut(s) 812, 916, 1141
Hpy188I TCNGA 5 cut(s) 55, 289, 463, 838, 1348
Hpy188III TCNNGA 1 cut(s) 974
Hpy8I GTNNAC 3 cut(s) 812, 916, 1141
HpyAV CCTTC 1 cut(s) 136
HpyCH4III ACNGT 1 cut(s) 1129
HpyCH4IV ACGT 2 cut(s) 214, 962
HpyF10VI GCNNNNNNNGC 6 cut(s) 93, 305, 549, 568, 972, 1222
HpyF3I CTNAG 3 cut(s) 495, 1041, 1302
HpySE526I ACGT 2 cut(s) 214, 962
Hsp92II CATG 5 cut(s) 49, 131, 905, 1071, 1229
HspAI GCGC 1 cut(s) 366
Kzo9I GATC 4 cut(s) 322, 515, 601, 1062
Lsp1109I GCAGC 1 cut(s) 1234
LweI GCATC 2 cut(s) 643, 658
MaeI CTAG 3 cut(s) 354, 747, 1357
MaeII ACGT 2 cut(s) 214, 962
MaeIII GTNAC 2 cut(s) 160, 958
MalI GATC 4 cut(s) 324, 517, 603, 1064
MboI GATC 4 cut(s) 322, 515, 601, 1062
MboII GAAGA 7 cut(s) 251, 356, 450, 819, 1214, 1219, 1268
MfeI CAATTG 1 cut(s) 1184
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 3 cut(s) 194, 725, 1039
MlsI TGGCCA 1 cut(s) 1075
MluCI AATT 5 cut(s) 676, 1002, 1083, 1184, 1197
MluNI TGGCCA 1 cut(s) 1075
MmeI TCCRAC 1 cut(s) 579
Mox20I TGGCCA 1 cut(s) 1075
MroXI GAANNNNTTC 1 cut(s) 252
MscI TGGCCA 1 cut(s) 1075
MseI TTAA 5 cut(s) 339, 381, 1155, 1169, 1179
MslI CAYNNNNRTG 2 cut(s) 132, 1239
Msp20I TGGCCA 1 cut(s) 1075
MspCI CTTAAG 1 cut(s) 1168
MspR9I CCNGG 2 cut(s) 1023, 1218
MunI CAATTG 1 cut(s) 1184
MvaI CCWGG 2 cut(s) 1023, 1218
MvnI CGCG 1 cut(s) 975
MwoI GCNNNNNNNGC 6 cut(s) 93, 305, 549, 568, 972, 1222
NcoI CCATGG 1 cut(s) 1067
NdeI CATATG 2 cut(s) 227, 690
NdeII GATC 4 cut(s) 322, 515, 601, 1062
NlaIII CATG 5 cut(s) 49, 131, 905, 1071, 1229
NlaIV GGNNCC 3 cut(s) 603, 1037, 1038
NmeAIII GCCGAG 2 cut(s) 163, 412
NmuCI GTSAC 2 cut(s) 160, 958
NruI TCGCGA 1 cut(s) 975
PdmI GAANNNNTTC 1 cut(s) 252
PfeI GAWTC 4 cut(s) 4, 253, 312, 1287
PflFI GACNNNGTC 1 cut(s) 182
PflMI CCANNNNNTGG 2 cut(s) 249, 902
PfoI TCCNGGA 1 cut(s) 1021
PkrI GCNGC 1 cut(s) 1224
PmaCI CACGTG 1 cut(s) 963
PmlI CACGTG 1 cut(s) 963
Ppu21I YACGTR 1 cut(s) 963
PshAI GACNNNNGTC 1 cut(s) 35
PsiI TTATAA 1 cut(s) 174
Psp6I CCWGG 2 cut(s) 1021, 1216
PspCI CACGTG 1 cut(s) 963
PspGI CCWGG 2 cut(s) 1021, 1216
PspN4I GGNNCC 3 cut(s) 603, 1037, 1038
PspOMI GGGCCC 1 cut(s) 1035
PspPI GGNCC 4 cut(s) 37, 1035, 1036, 1214
PsuI RGATCY 1 cut(s) 601
PsyI GACNNNGTC 1 cut(s) 182
RruI TCGCGA 1 cut(s) 975
RsaI GTAC 3 cut(s) 619, 917, 1115
RsaNI GTAC 3 cut(s) 618, 916, 1114
RseI CAYNNNNRTG 2 cut(s) 132, 1239
SaqAI TTAA 5 cut(s) 339, 381, 1155, 1169, 1179
SatI GCNGC 1 cut(s) 1223
Sau3AI GATC 4 cut(s) 322, 515, 601, 1062
Sau96I GGNCC 4 cut(s) 37, 1035, 1036, 1214
ScrFI CCNGG 2 cut(s) 1023, 1218
SduI GDGCHC 3 cut(s) 194, 725, 1039
SfaNI GCATC 2 cut(s) 643, 658
SfcI CTRYAG 1 cut(s) 10
SinI GGWCC 1 cut(s) 37
SmiMI CAYNNNNRTG 2 cut(s) 132, 1239
SmlI CTYRAG 1 cut(s) 1168
SmoI CTYRAG 1 cut(s) 1168
SpeI ACTAGT 1 cut(s) 353
Sse9I AATT 5 cut(s) 676, 1002, 1083, 1184, 1197
SsiI CCGC 1 cut(s) 715
SspI AATATT 2 cut(s) 337, 613
SspMI CTAG 3 cut(s) 354, 747, 1357
StyD4I CCNGG 2 cut(s) 1021, 1216
StyI CCWWGG 3 cut(s) 243, 580, 1067
TaaI ACNGT 1 cut(s) 1129
TaiI ACGT 2 cut(s) 217, 965
TasI AATT 5 cut(s) 676, 1002, 1083, 1184, 1197
TatI WGTACW 2 cut(s) 617, 915
TfiI GAWTC 4 cut(s) 4, 253, 312, 1287
Tru1I TTAA 5 cut(s) 339, 381, 1155, 1169, 1179
Tru9I TTAA 5 cut(s) 339, 381, 1155, 1169, 1179
TscAI CASTG 1 cut(s) 1132
TseFI GTSAC 2 cut(s) 160, 958
TseI GCWGC 1 cut(s) 1222
Tsp45I GTSAC 2 cut(s) 160, 958
TspDTI ATGAA 7 cut(s) 144, 304, 637, 806, 850, 890, 1242
TspGWI ACGGA 1 cut(s) 594
TspRI CASTG 1 cut(s) 1132
Tth111I GACNNNGTC 1 cut(s) 182
Van91I CCANNNNNTGG 2 cut(s) 249, 902
Vha464I CTTAAG 1 cut(s) 1168
VpaK11BI GGWCC 1 cut(s) 37
XapI RAATTY 1 cut(s) 1002
XcmI CCANNNNNNNNNTGG 1 cut(s) 899
XmiI GTMKAC 1 cut(s) 1140
XmnI GAANNNNTTC 1 cut(s) 252
XspI CTAG 3 cut(s) 354, 747, 1357
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.