Prupe.8G074300_v2.0.a1

Alpha-1,4-glucan-protein synthase UDP-forming

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
10837264 .. 10841502
4239 bp
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UTR
Exon/CDS
Intron
Prupe.8G074300.1

Sequence Viewer

Length: 357 bp
ATGGGTGGTGTATACTTTCTCCTGGAGTTGGATCCCTTCATAATCAACAATGGTGATTATAAATGTCGTCTCATTAATCTGAGGGATCATCATTTTGACAGCAACATAATACTTTCTTGTCTGGGTGTGCATGGAGGGCGTCTCAAGATGTTTGAATTTGAATTGGCTACCAATACTTTTTTAGTTTGGGAAGTGAATGTGAATAAAGAAGAGTATCATGGAGGATTTGAAAAGGTTGCCAAAGACCCATCTGGAAAAGAGATCAATGTACTCGAACAACATATAAATCCATCAAGTCCTCTATTTTTCAACACTCTTTATGATCCATTCAGAGAAGATGCAAACTTATTCTTTTAG

Protein Analysis

119

Amino Acids

13.67

Weight (kDa)

5.07

Isoelectric Point (pI)

49.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 60
AccI GTMKAC 1 cut(s) 12
AclWI GGATC 4 cut(s) 26, 39, 93, 317
AcsI RAATTY 1 cut(s) 155
AcyI GRCGYC 1 cut(s) 139
AfaI GTAC 1 cut(s) 270
AfiI CCNNNNNNNGG 1 cut(s) 28
AgsI TTSAA 4 cut(s) 155, 161, 230, 310
AjnI CCWGG 1 cut(s) 21
Alw26I GTCTC 2 cut(s) 74, 146
AlwI GGATC 4 cut(s) 26, 39, 93, 317
ApoI RAATTY 1 cut(s) 155
AseI ATTAAT 1 cut(s) 75
AsuHPI GGTGA 1 cut(s) 65
BamHI GGATCC 1 cut(s) 31
BccI CCATC 2 cut(s) 256, 298
BciT130I CCWGG 1 cut(s) 23
BcoDI GTCTC 2 cut(s) 74, 146
Bme1390I CCNGG 1 cut(s) 23
BmiI GGNNCC 1 cut(s) 33
BmrFI CCNGG 1 cut(s) 23
BmsI GCATC 1 cut(s) 328
BplI GAGNNNNNCTC 2 cut(s) 126, 158
BpmI CTGGAG 1 cut(s) 44
BpuEI CTTGAG 1 cut(s) 128
BsaHI GRCGYC 1 cut(s) 139
Bsc4I CCNNNNNNNGG 1 cut(s) 28
BseBI CCWGG 1 cut(s) 23
BseLI CCNNNNNNNGG 1 cut(s) 28
BseMII CTCAG 1 cut(s) 71
BslI CCNNNNNNNGG 1 cut(s) 28
BsmAI GTCTC 2 cut(s) 74, 146
BsmBI CGTCTC 2 cut(s) 74, 146
Bsp143I GATC 4 cut(s) 31, 85, 261, 322
BspCNI CTCAG 1 cut(s) 72
BspLI GGNNCC 1 cut(s) 33
BspPI GGATC 4 cut(s) 26, 39, 93, 317
BssMI GATC 4 cut(s) 31, 85, 261, 322
BssNAI GTATAC 1 cut(s) 13
BssNI GRCGYC 1 cut(s) 139
Bst1107I GTATAC 1 cut(s) 13
Bst2UI CCWGG 1 cut(s) 23
Bst6I CTCTTC 1 cut(s) 204
BstACI GRCGYC 1 cut(s) 139
BstDEI CTNAG 1 cut(s) 80
BstKTI GATC 4 cut(s) 34, 88, 264, 325
BstMAI GTCTC 2 cut(s) 74, 146
BstMBI GATC 4 cut(s) 31, 85, 261, 322
BstMWI GCNNNNNNNGC 1 cut(s) 136
BstNI CCWGG 1 cut(s) 23
BstSCI CCNGG 1 cut(s) 21
BstX2I RGATCY 1 cut(s) 31
BstYI RGATCY 1 cut(s) 31
BstZ17I GTATAC 1 cut(s) 13
CseI GACGC 1 cut(s) 128
Csp6I GTAC 1 cut(s) 269
CviAII CATG 2 cut(s) 131, 218
CviJI RGCY 1 cut(s) 167
CviKI_1 RGCY 1 cut(s) 167
CviQI GTAC 1 cut(s) 269
DdeI CTNAG 1 cut(s) 80
DpnI GATC 4 cut(s) 33, 87, 263, 324
DpnII GATC 4 cut(s) 31, 85, 261, 322
Eam1104I CTCTTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 204
EcoRII CCWGG 1 cut(s) 21
Esp3I CGTCTC 2 cut(s) 74, 146
FaeI CATG 2 cut(s) 134, 221
FaiI YATR 9 cut(s) 13, 41, 60, 107, 132, 219, 282, 284, 321
FatI CATG 2 cut(s) 130, 217
FblI GTMKAC 1 cut(s) 12
GsuI CTGGAG 1 cut(s) 44
HgaI GACGC 1 cut(s) 128
Hin1I GRCGYC 1 cut(s) 139
Hin1II CATG 2 cut(s) 134, 221
HphI GGTGA 1 cut(s) 65
Hpy166II GTNNAC 1 cut(s) 13
Hpy188I TCNGA 2 cut(s) 81, 332
Hpy188III TCNNGA 2 cut(s) 145, 252
Hpy8I GTNNAC 1 cut(s) 13
HpyAV CCTTC 1 cut(s) 46
HpyCH4V TGCA 2 cut(s) 130, 341
HpyF10VI GCNNNNNNNGC 1 cut(s) 136
HpyF3I CTNAG 1 cut(s) 80
Hsp92I GRCGYC 1 cut(s) 139
Hsp92II CATG 2 cut(s) 134, 221
Kzo9I GATC 4 cut(s) 31, 85, 261, 322
LpnPI CCDG 4 cut(s) 8, 35, 107, 237
LweI GCATC 1 cut(s) 328
MalI GATC 4 cut(s) 33, 87, 263, 324
MboI GATC 4 cut(s) 31, 85, 261, 322
MboII GAAGA 2 cut(s) 221, 347
MflI RGATCY 1 cut(s) 31
MluCI AATT 2 cut(s) 155, 161
MmeI TCCRAC 1 cut(s) 9
MnlI CCTC 4 cut(s) 75, 128, 215, 309
MseI TTAA 1 cut(s) 75
MspR9I CCNGG 1 cut(s) 23
MvaI CCWGG 1 cut(s) 23
MwoI GCNNNNNNNGC 1 cut(s) 136
NdeII GATC 4 cut(s) 31, 85, 261, 322
NlaIII CATG 2 cut(s) 134, 221
NlaIV GGNNCC 1 cut(s) 33
PfoI TCCNGGA 1 cut(s) 21
PshBI ATTAAT 1 cut(s) 75
PsiI TTATAA 1 cut(s) 60
Psp6I CCWGG 1 cut(s) 21
PspGI CCWGG 1 cut(s) 21
PspN4I GGNNCC 1 cut(s) 33
PsuI RGATCY 1 cut(s) 31
RsaI GTAC 1 cut(s) 270
RsaNI GTAC 1 cut(s) 269
SaqAI TTAA 1 cut(s) 75
Sau3AI GATC 4 cut(s) 31, 85, 261, 322
ScrFI CCNGG 1 cut(s) 23
SetI ASST 1 cut(s) 237
SfaNI GCATC 1 cut(s) 328
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 2 cut(s) 155, 161
StyD4I CCNGG 1 cut(s) 21
TaqI TCGA 1 cut(s) 273
TasI AATT 2 cut(s) 155, 161
TatI WGTACW 1 cut(s) 268
Tru1I TTAA 1 cut(s) 75
Tru9I TTAA 1 cut(s) 75
TspDTI ATGAA 1 cut(s) 28
VspI ATTAAT 1 cut(s) 75
XapI RAATTY 1 cut(s) 155
XmiI GTMKAC 1 cut(s) 12
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.