FvH4_6g01541

A Receptor for Ubiquitination Targets

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000270
Physical Location & Seq
Forward (+)
868631 .. 870255
1625 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g01541.t1

Sequence Viewer

Length: 1605 bp
ATGATCCCTGCTTCCAAGAGAAGCCGCAATGAACAGCCACAGCGATCATCAAAATCGACGATCGATAATCTCCCTGACCTTGTCTTAGTCGAAATCCTTTGTCGACTCCCTCACCACAAAGTTGCTTTTCGATGCAAGCTCGTATCCAAGCGTTGGCGCACCATCCTCTCTGATCCTTATTTTGCCAACCGCTTTTTACAGACCCAACATGATCAGCAGAAACCCCTTGTGCATCAGTATCTAATGATTCCCTCTGAGGAGGTTTCAATTCGTAAGACTTTGGTCCTCACCATACCATCAGAGCCTCCTTCTCCTCTTTTAGAAGCCAGCAGCATATCAAGTATTTTTTCATTCCTTCCTTGTCTTCAAAAGTATGCCAGCGACAGGGAAGGTAATGTTTATGTGTATGGGAGTTATAATGACATAGTCTTGTGCGCGCAAGGTTGTGATACTAAACTTGTTTACTACATATGCAATCCTTACACCAAGAAATGTATTCGTCTTCCTCCTTCCCCTCCAGGACATGCTCATGATATAGTTACGACAGCAGGATTCATTTGCGAGCCCTACTACGATATCAAGGAAGAAGGTTCTACTAGCAACAGCTCTGCAATCAAGCTTCATGCCGAGTATAGGTGCATGGTTGTGCAGTTGATTACCAAGTACAACCATGCCAAATGTTCTGAGAGTGTTTTTGTGGAGATCTTTTCTTTTGAGACAGGTGAATGGAGAGAGTATTCTTTATCTAGAATGTCAGATAAACAACGCTTTCTTCTCTCAATACTGCCAACGACGCCGGGCATTGCTTGCAATGGGAAGTTGTATTGGTTGACCAAAGAAGGTTCTATTTTTGAGTTGGATCCGATCAATATGTGTGGTACTACTAGTGATGCTCATGTTATTGATCAATGTCGTTTCATTGATCCACCTACCCTACCGACCGGAGTGTATATTTCCCGCCGTTGGTATATAGGTGTTTGTCGAGGGCACTTGCAGATGTGCCTGGAGAACTTCAATTATTTTGAACCTATGGTTATTTGGGAGTTGAAAAAAAATGAAGTAGATGGCAAACCAGAATGGTGTATACTTCATCAAATAACTTCTCTGTCAGAGATGGTTCCTGAACAACGTTCCATCGGCTTTCGCATGCTAGGTTTTCACCCAATTCATAGGGATATGGTGTATCTACGAGACAACGAGAAGCCAAGATTAGTCATGTGCAATGTTAGAGAAAAAACATTAGAGATAGCTACAGTAATTCCATCTGAGAATAGTCCTCGAGTATCTTCGGGGTTGCAGATTGTCCCCTATGTAATCCCATGGTGGCCATCACCAGTTCCAACAAGATGTAACTTTCGGAAGGAGTACCTCAATATCACAGTGACTGTGATCGGTACCGGTGTAGACACCTTTATTCTCAAGGTAGGTTCCTTTACTACAGTTAAGCAATTGAAACAAGAGCTTGAAGAAAAGAAAGGGCATCGGCAGCTTGGTCGTGTTCTGCATTTTGATGGGAGAGTTTTGTATGATGATGACAAGTGGCTTGCGGATTATGGAATCAAGGACAACTCCAATATTACGTTGGAAAGACAAACCTTTTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

535

Amino Acids

61.47

Weight (kDa)

8.31

Isoelectric Point (pI)

42.8

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 61 1.1e-07 F-box domain
F-box-like PF12937 21 - 64 1.3e-06 F-box-like
b-prop_At3g26010-like PF24750 120 - 417 4.7e-14 F-box protein At3g26010-like, beta-propeller
ubiquitin PF00240 460 - 528 7.7e-10 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 417
Acc65I GGTACC 1 cut(s) 1394
AccB1I GGYRCC 1 cut(s) 1394
AccB7I CCANNNNNTGG 1 cut(s) 153
AccI GTMKAC 3 cut(s) 103, 1084, 1404
AccII CGCG 1 cut(s) 437
AciI CCGC 4 cut(s) 25, 190, 958, 1547
AclI AACGTT 1 cut(s) 1129
AclWI GGATC 4 cut(s) 167, 854, 867, 917
AcoI YGGCCR 1 cut(s) 1325
AcyI GRCGYC 1 cut(s) 794
AfaI GTAC 4 cut(s) 665, 880, 1367, 1396
AfiI CCNNNNNNNGG 4 cut(s) 153, 384, 633, 963
AgeI ACCGGT 1 cut(s) 1397
AgsI TTSAA 7 cut(s) 267, 368, 1015, 1025, 1048, 1453, 1466
AhlI ACTAGT 1 cut(s) 884
AjnI CCWGG 2 cut(s) 517, 1002
AluBI AGCT 6 cut(s) 139, 606, 619, 1250, 1462, 1489
AluI AGCT 6 cut(s) 139, 606, 619, 1250, 1462, 1489
Alw26I GTCTC 2 cut(s) 710, 1185
AlwI GGATC 4 cut(s) 167, 854, 867, 917
AlwNI CAGNNNCTG 1 cut(s) 1385
Ama87I CYCGRG 1 cut(s) 1278
AoxI GGCC 1 cut(s) 1325
ApeKI GCWGC 2 cut(s) 330, 1486
AsiGI ACCGGT 1 cut(s) 1397
Asp718I GGTACC 1 cut(s) 1394
AspLEI GCGC 3 cut(s) 159, 437, 439
AspS9I GGNCC 1 cut(s) 283
AsuC2I CCSGG 1 cut(s) 798
AsuHPI GGTGA 5 cut(s) 104, 280, 734, 1151, 1323
AvaI CYCGRG 1 cut(s) 1278
AvaII GGWCC 1 cut(s) 283
BaeGI GKGCMC 1 cut(s) 990
BaeI ACNNNNGTAYC 2 cut(s) 1386, 1419
BalI TGGCCA 1 cut(s) 1327
BamHI GGATCC 1 cut(s) 859
BanI GGYRCC 1 cut(s) 1394
BanII GRGCYC 1 cut(s) 567
BbsI GAAGAC 2 cut(s) 356, 494
BbvI GCAGC 2 cut(s) 342, 1498
BccI CCATC 8 cut(s) 170, 304, 1058, 1108, 1142, 1270, 1336, 1505
BceAI ACGGC 1 cut(s) 945
BcgI CGANNNNNNTGC 2 cut(s) 1475, 1509
BciT130I CCWGG 2 cut(s) 519, 1004
BciVI GTATCC 1 cut(s) 154
BclI TGATCA 2 cut(s) 211, 904
BcnI CCSGG 1 cut(s) 798
BcoDI GTCTC 2 cut(s) 710, 1185
BcuI ACTAGT 1 cut(s) 884
BfaI CTAG 4 cut(s) 597, 747, 885, 1151
BfmI CTRYAG 2 cut(s) 1251, 1437
BfuI GTATCC 1 cut(s) 154
BglII AGATCT 1 cut(s) 702
BisI GCNGC 3 cut(s) 25, 331, 1487
BlsI GCNGC 3 cut(s) 26, 332, 1488
Bme1390I CCNGG 3 cut(s) 519, 798, 1004
Bme18I GGWCC 1 cut(s) 283
BmeT110I CYCGRG 1 cut(s) 1278
BmgT120I GGNCC 1 cut(s) 283
BmiI GGNNCC 4 cut(s) 861, 1119, 1396, 1429
BmrFI CCNGG 3 cut(s) 519, 798, 1004
BmsI GCATC 4 cut(s) 122, 241, 880, 1489
BoxI GACNNNNGTC 1 cut(s) 281
BpiI GAAGAC 2 cut(s) 356, 494
BpmI CTGGAG 2 cut(s) 501, 1025
BpuEI CTTGAG 1 cut(s) 1403
BpuMI CCSGG 1 cut(s) 798
Bsa29I ATCGAT 1 cut(s) 63
BsaHI GRCGYC 1 cut(s) 794
BsaJI CCNNGG 1 cut(s) 1319
BsaWI WCCGGW 2 cut(s) 941, 1397
Bsc4I CCNNNNNNNGG 4 cut(s) 153, 384, 633, 963
Bse118I RCCGGY 1 cut(s) 1397
Bse1I ACTGG 1 cut(s) 1334
Bse3DI GCAATG 4 cut(s) 34, 801, 817, 1228
BseBI CCWGG 2 cut(s) 519, 1004
BseCI ATCGAT 1 cut(s) 63
BseDI CCNNGG 1 cut(s) 1319
BseGI GGATG 1 cut(s) 162
BseLI CCNNNNNNNGG 4 cut(s) 153, 384, 633, 963
BseMI GCAATG 4 cut(s) 34, 801, 817, 1228
BseMII CTCAG 3 cut(s) 246, 675, 1257
BseNI ACTGG 1 cut(s) 1334
BsePI GCGCGC 1 cut(s) 435
BseRI GAGGAG 2 cut(s) 272, 303
BseSI GKGCMC 1 cut(s) 990
BseXI GCAGC 2 cut(s) 342, 1498
BsgI GTGCAG 1 cut(s) 668
Bsh1236I CGCG 1 cut(s) 437
Bsh1285I CGRYCG 2 cut(s) 63, 942
BshFI GGCC 1 cut(s) 1327
BshNI GGYRCC 1 cut(s) 1394
BshTI ACCGGT 1 cut(s) 1397
BshVI ATCGAT 1 cut(s) 63
BsiEI CGRYCG 2 cut(s) 63, 942
BsiHKCI CYCGRG 1 cut(s) 1278
BsiSI CCGG 3 cut(s) 797, 942, 1398
BslFI GGGAC 1 cut(s) 1289
BslI CCNNNNNNNGG 4 cut(s) 153, 384, 633, 963
BsmAI GTCTC 2 cut(s) 710, 1185
BsmFI GGGAC 1 cut(s) 1289
BsnI GGCC 1 cut(s) 1327
BsoBI CYCGRG 1 cut(s) 1278
Bsp1286I GDGCHC 2 cut(s) 567, 990
Bsp19I CCATGG 1 cut(s) 1319
BspACI CCGC 4 cut(s) 25, 190, 958, 1547
BspANI GGCC 1 cut(s) 1327
BspCNI CTCAG 3 cut(s) 247, 676, 1258
BspDI ATCGAT 1 cut(s) 63
BspFNI CGCG 1 cut(s) 437
BspHI TCATGA 1 cut(s) 529
BspLI GGNNCC 4 cut(s) 861, 1119, 1396, 1429
BspPI GGATC 4 cut(s) 167, 854, 867, 917
BspT107I GGYRCC 1 cut(s) 1394
BsrDI GCAATG 4 cut(s) 34, 801, 817, 1228
BsrFI RCCGGY 1 cut(s) 1397
BsrI ACTGG 1 cut(s) 1334
BssAI RCCGGY 1 cut(s) 1397
BssECI CCNNGG 1 cut(s) 1319
BssHII GCGCGC 1 cut(s) 435
BssNAI GTATAC 1 cut(s) 1085
BssNI GRCGYC 1 cut(s) 794
BssT1I CCWWGG 1 cut(s) 1319
Bst1107I GTATAC 1 cut(s) 1085
Bst2UI CCWGG 2 cut(s) 519, 1004
Bst4CI ACNGT 4 cut(s) 1255, 1381, 1387, 1441
BstACI GRCGYC 1 cut(s) 794
BstAPI GCANNNNNTGC 1 cut(s) 807
BstC8I GCNNGC 8 cut(s) 137, 328, 379, 437, 563, 808, 1148, 1545
BstDEI CTNAG 4 cut(s) 85, 255, 684, 1266
BstDSI CCRYGG 1 cut(s) 1319
BstF5I GGATG 1 cut(s) 162
BstFNI CGCG 1 cut(s) 437
BstHHI GCGC 3 cut(s) 159, 437, 439
BstMAI GTCTC 2 cut(s) 710, 1185
BstMCI CGRYCG 2 cut(s) 63, 942
BstMWI GCNNNNNNNGC 3 cut(s) 793, 807, 1486
BstNI CCWGG 2 cut(s) 519, 1004
BstNSI RCATGY 2 cut(s) 527, 1150
BstPAI GACNNNNGTC 1 cut(s) 281
BstSCI CCNGG 3 cut(s) 517, 796, 1002
BstSFI CTRYAG 2 cut(s) 1251, 1437
BstSLI GKGCMC 1 cut(s) 990
BstUI CGCG 1 cut(s) 437
BstV1I GCAGC 2 cut(s) 342, 1498
BstV2I GAAGAC 2 cut(s) 356, 494
BstX2I RGATCY 2 cut(s) 702, 859
BstYI RGATCY 2 cut(s) 702, 859
BstZ17I GTATAC 1 cut(s) 1085
Bsu15I ATCGAT 1 cut(s) 63
BsuI GTATCC 1 cut(s) 154
BsuRI GGCC 1 cut(s) 1327
BsuTUI ATCGAT 1 cut(s) 63
BtgI CCRYGG 1 cut(s) 1319
BtsCI GGATG 1 cut(s) 162
BtsIMutI CAGTG 1 cut(s) 1386
Cac8I GCNNGC 8 cut(s) 137, 328, 379, 437, 563, 808, 1148, 1545
CaiI CAGNNNCTG 1 cut(s) 1385
CciI TCATGA 1 cut(s) 529
CfoI GCGC 3 cut(s) 159, 437, 439
Cfr10I RCCGGY 1 cut(s) 1397
Cfr13I GGNCC 1 cut(s) 283
ClaI ATCGAT 1 cut(s) 63
CseI GACGC 1 cut(s) 802
Csp6I GTAC 4 cut(s) 664, 879, 1366, 1395
CspAI ACCGGT 1 cut(s) 1397
CspCI CAANNNNNGTGG 2 cut(s) 856, 891
CviQI GTAC 4 cut(s) 664, 879, 1366, 1395
DdeI CTNAG 4 cut(s) 85, 255, 684, 1266
EaeI YGGCCR 1 cut(s) 1325
Eco130I CCWWGG 1 cut(s) 1319
Eco24I GRGCYC 1 cut(s) 567
Eco32I GATATC 1 cut(s) 577
Eco47I GGWCC 1 cut(s) 283
Eco88I CYCGRG 1 cut(s) 1278
EcoRII CCWGG 2 cut(s) 517, 1002
EcoRV GATATC 1 cut(s) 577
EcoT14I CCWWGG 1 cut(s) 1319
EcoT38I GRGCYC 1 cut(s) 567
ErhI CCWWGG 1 cut(s) 1319
FaqI GGGAC 1 cut(s) 1289
FauI CCCGC 1 cut(s) 965
FauNDI CATATG 1 cut(s) 470
FbaI TGATCA 2 cut(s) 211, 904
FblI GTMKAC 3 cut(s) 103, 1084, 1404
Fnu4HI GCNGC 3 cut(s) 25, 331, 1487
FokI GGATG 1 cut(s) 149
FriOI GRGCYC 1 cut(s) 567
Fsp4HI GCNGC 3 cut(s) 25, 331, 1487
FspBI CTAG 4 cut(s) 597, 747, 885, 1151
GlaI GCGC 3 cut(s) 158, 436, 438
GluI GCNGC 3 cut(s) 25, 331, 1487
GsuI CTGGAG 2 cut(s) 501, 1025
HaeIII GGCC 1 cut(s) 1327
HapII CCGG 3 cut(s) 797, 942, 1398
HgaI GACGC 1 cut(s) 802
HhaI GCGC 3 cut(s) 159, 437, 439
Hin1I GRCGYC 1 cut(s) 794
Hin6I GCGC 3 cut(s) 157, 435, 437
HinP1I GCGC 3 cut(s) 157, 435, 437
HincII GTYRAC 2 cut(s) 104, 831
HindII GTYRAC 2 cut(s) 104, 831
HindIII AAGCTT 1 cut(s) 617
HinfI GANTC 4 cut(s) 105, 247, 552, 1557
HpaII CCGG 3 cut(s) 797, 942, 1398
HphI GGTGA 5 cut(s) 104, 280, 734, 1151, 1323
Hpy166II GTNNAC 5 cut(s) 104, 463, 831, 1085, 1405
Hpy188I TCNGA 9 cut(s) 172, 256, 301, 685, 757, 864, 1111, 1267, 1359
Hpy188III TCNNGA 3 cut(s) 530, 747, 1121
Hpy8I GTNNAC 5 cut(s) 104, 463, 831, 1085, 1405
Hpy99I CGWCG 2 cut(s) 61, 796
HpyAV CCTTC 7 cut(s) 318, 365, 383, 519, 581, 833, 1354
HpyCH4III ACNGT 4 cut(s) 1255, 1381, 1387, 1441
HpyCH4IV ACGT 2 cut(s) 1129, 1580
HpyF10VI GCNNNNNNNGC 3 cut(s) 793, 807, 1486
HpyF3I CTNAG 4 cut(s) 85, 255, 684, 1266
HpySE526I ACGT 2 cut(s) 1129, 1580
Hsp92I GRCGYC 1 cut(s) 794
HspAI GCGC 3 cut(s) 157, 435, 437
KpnI GGTACC 1 cut(s) 1398
Ksp22I TGATCA 2 cut(s) 211, 904
Lsp1109I GCAGC 2 cut(s) 342, 1498
LweI GCATC 4 cut(s) 122, 241, 880, 1489
MaeI CTAG 4 cut(s) 597, 747, 885, 1151
MaeII ACGT 2 cut(s) 1129, 1580
MaeIII GTNAC 3 cut(s) 538, 1349, 1381
MboII GAAGA 6 cut(s) 356, 494, 596, 764, 1278, 1478
MfeI CAATTG 1 cut(s) 1448
MflI RGATCY 2 cut(s) 702, 859
MhlI GDGCHC 2 cut(s) 567, 990
MlsI TGGCCA 1 cut(s) 1327
MluCI AATT 5 cut(s) 267, 1015, 1164, 1257, 1448
MluNI TGGCCA 1 cut(s) 1327
MlyI GAGTC 1 cut(s) 99
MmeI TCCRAC 3 cut(s) 837, 1364, 1563
Mox20I TGGCCA 1 cut(s) 1327
MscI TGGCCA 1 cut(s) 1327
MseI TTAA 1 cut(s) 1443
MslI CAYNNNNRTG 3 cut(s) 528, 644, 1509
Msp20I TGGCCA 1 cut(s) 1327
MspI CCGG 3 cut(s) 797, 942, 1398
MspR9I CCNGG 3 cut(s) 519, 798, 1004
MunI CAATTG 1 cut(s) 1448
MvaI CCWGG 2 cut(s) 519, 1004
MvnI CGCG 1 cut(s) 437
MwoI GCNNNNNNNGC 3 cut(s) 793, 807, 1486
NciI CCSGG 1 cut(s) 798
NcoI CCATGG 1 cut(s) 1319
NdeI CATATG 1 cut(s) 470
NlaIV GGNNCC 4 cut(s) 861, 1119, 1396, 1429
NmeAIII GCCGAG 1 cut(s) 652
NmuCI GTSAC 1 cut(s) 1381
NspI RCATGY 2 cut(s) 527, 1150
PaeI GCATGC 1 cut(s) 1150
PaeR7I CTCGAG 1 cut(s) 1278
PagI TCATGA 1 cut(s) 529
PauI GCGCGC 1 cut(s) 435
PfeI GAWTC 3 cut(s) 247, 552, 1557
PflFI GACNNNGTC 2 cut(s) 80, 425
PflMI CCANNNNNTGG 1 cut(s) 153
PfoI TCCNGGA 1 cut(s) 517
PinAI ACCGGT 1 cut(s) 1397
PkrI GCNGC 3 cut(s) 26, 332, 1488
Ple19I CGATCG 1 cut(s) 63
PleI GAGTC 1 cut(s) 99
PpsI GAGTC 1 cut(s) 99
PshAI GACNNNNGTC 1 cut(s) 281
PsiI TTATAA 1 cut(s) 417
Psp1406I AACGTT 1 cut(s) 1129
Psp6I CCWGG 2 cut(s) 517, 1002
PspGI CCWGG 2 cut(s) 517, 1002
PspN4I GGNNCC 4 cut(s) 861, 1119, 1396, 1429
PspPI GGNCC 1 cut(s) 283
PspXI VCTCGAGB 1 cut(s) 1278
PstNI CAGNNNCTG 1 cut(s) 1385
PsuI RGATCY 2 cut(s) 702, 859
PsyI GACNNNGTC 2 cut(s) 80, 425
PteI GCGCGC 1 cut(s) 435
PvuI CGATCG 1 cut(s) 63
RsaI GTAC 4 cut(s) 665, 880, 1367, 1396
RsaNI GTAC 4 cut(s) 664, 879, 1366, 1395
RseI CAYNNNNRTG 3 cut(s) 528, 644, 1509
SalI GTCGAC 1 cut(s) 102
SaqAI TTAA 1 cut(s) 1443
SatI GCNGC 3 cut(s) 25, 331, 1487
Sau96I GGNCC 1 cut(s) 283
SchI GAGTC 1 cut(s) 99
ScrFI CCNGG 3 cut(s) 519, 798, 1004
SduI GDGCHC 2 cut(s) 567, 990
SfaNI GCATC 4 cut(s) 122, 241, 880, 1489
SfcI CTRYAG 2 cut(s) 1251, 1437
Sfr274I CTCGAG 1 cut(s) 1278
SinI GGWCC 1 cut(s) 283
SlaI CTCGAG 1 cut(s) 1278
SmiMI CAYNNNNRTG 3 cut(s) 528, 644, 1509
SmlI CTYRAG 2 cut(s) 1278, 1418
SmoI CTYRAG 2 cut(s) 1278, 1418
SpeI ACTAGT 1 cut(s) 884
SphI GCATGC 1 cut(s) 1150
Sse9I AATT 5 cut(s) 267, 1015, 1164, 1257, 1448
SsiI CCGC 4 cut(s) 25, 190, 958, 1547
SspI AATATT 1 cut(s) 1576
SspMI CTAG 4 cut(s) 597, 747, 885, 1151
StyD4I CCNGG 3 cut(s) 517, 796, 1002
StyI CCWWGG 1 cut(s) 1319
TaaI ACNGT 4 cut(s) 1255, 1381, 1387, 1441
TaiI ACGT 2 cut(s) 1132, 1583
TaqI TCGA 7 cut(s) 56, 63, 90, 103, 130, 982, 1279
TasI AATT 5 cut(s) 267, 1015, 1164, 1257, 1448
TatI WGTACW 1 cut(s) 663
TauI GCSGC 1 cut(s) 27
TfiI GAWTC 3 cut(s) 247, 552, 1557
Tru1I TTAA 1 cut(s) 1443
Tru9I TTAA 1 cut(s) 1443
TscAI CASTG 1 cut(s) 1386
TseFI GTSAC 1 cut(s) 1381
TseI GCWGC 2 cut(s) 330, 1486
Tsp45I GTSAC 1 cut(s) 1381
TspDTI ATGAA 8 cut(s) 45, 339, 544, 611, 907, 1071, 1079, 1157
TspRI CASTG 1 cut(s) 1386
Tth111I GACNNNGTC 2 cut(s) 80, 425
Van91I CCANNNNNTGG 1 cut(s) 153
VpaK11BI GGWCC 1 cut(s) 283
XbaI TCTAGA 1 cut(s) 746
XceI RCATGY 2 cut(s) 527, 1150
XcmI CCANNNNNNNNNTGG 1 cut(s) 1579
XhoI CTCGAG 1 cut(s) 1278
XmiI GTMKAC 3 cut(s) 103, 1084, 1404
XspI CTAG 4 cut(s) 597, 747, 885, 1151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.