Rh3CG021100

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3C
OG0000270
Physical Location & Seq
Forward (+)
1451003 .. 1452741
1739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3CG021100.1

Sequence Viewer

Length: 1533 bp
ATGTCTCACCAGAAAGTTTCCGCCGCCGCCTCCTCCGCCGTGCCTAGTGGTGGGAATGCTACCACAAGAAGACAAAAAAGAGGTACTACTAGTATATATCAGTCTGTCTTTAAAAAATCCAGGAGATCATCAGACTCTGTAACTAATTCACCACCATCATTGGAAACCACGATTGATGATCTCCCTGACTTTGTACTGGTCGAAATCCTTTGTCGACTTCTTTACAATGTTAAGCTTGTTTTTCAATGCAAGTGTGTGTCTAGGCGCTGGTTTGCTCTCATCTCTAATTCATATTTCATTACCCGATTTTTATGTCAGCATTATAGGCAACAAAAGTCTTTCGCGACTACTGATTACGTTATGGTCCCTTATAAGGATAACAAAATTGTACCCCTTACCTCGTCTTCCATTCTTCCAAGCTCTTTGTCATTGAATTTCCTCCCTTGTTTTGAATCTCCTAACCAAGATAATGAGCCAATTGTGGAAGCAATTTTTGATGATTTGGTCTTGTGCTGCGCAACCAAGAACTATCAATACTATTACTACATCTGCAATCCACTCACTAAGCAATGGGTTGCTCTTCCCCCTGTCCGTCAAGTCTTCGAGTTGAAAGTACCAGTGGGGTTCATTTGTGAACCCTACTGTGATCATGGAAGAGAAGAGCAAAATAGTGCCAGAAGTAGTAGTAGTAGCTCTATCATGAAGCTTAACACCGGCTATAGGTGCAGGGTTGTGCGAATACTCCCAAATAGAATATGTCATCCAGAACTGGGTTTCTATGTGCAGATCTTCTCTTCTGAGACAGGTGAATGGAGGGAGTATCGGTTGCCTAATCGAATAAAAAAGTTCGGTTGGTTCATTGCTTGGCGGCCTGGCGTTGCTTGCAATGGCAAGTTATATTGGTACAATGACGGTGGCTTTACTTTTGAGTTGGATTCGTTCAATATTAGTACTAGCGGTTTTCCTTCCGGTGCTGTTATCGACAGTTGTCGTTTCACTAAAACGCCCAGAAAGTGCTTCCATCTAGGTGTGTGCCAAGGGCGTTTGCGGATGTACCCTTTTTCCATAATGGAAACTGTTAGTATTTGGGAACTGAAAGAAAATTCTGGCAACTTGGAATGGTGTTTGATATTTGACAGAATTCCTATGTTGGATATGGTTTCCAAAGATCCTAAGATCACTAAAGAAAAATCGGGCAAATTGGACGTGCTAGGTTTCCACCCAAGCAATGAGGATGTCGTGTATTTGAAATTTCCTGAACATATAATCATGTGCAATCTTCGCAAAAAGACGTTAGAGAAGAGTCCAGTTGATCCCCATACAAATATTCAATTTGATTTCAGTTGCAATGTTGATGAAGAGAGGTTTTCATTTGGTCGCCCTACAAATATTCATCCATATGTGCTTCCATGGTGGCCTACACCAGTTCCTAGAATCAATAAACCAAAGGAGCGCCAGATCAAGGTCTTGAAACAGTTTGATATATTCCTACCTTCAGAGAGCTTCTTGATTGTGTCGTCCAAAACTTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

510

Amino Acids

58.8

Weight (kDa)

9.03

Isoelectric Point (pI)

49.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
b-prop_At3g26010-like PF24750 138 - 478 1.4e-13 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 372
Acc16I TGCGCA 1 cut(s) 517
AccI GTMKAC 1 cut(s) 214
AccII CGCG 1 cut(s) 344
AciI CCGC 7 cut(s) 21, 24, 27, 36, 868, 957, 1048
AclWI GGATC 2 cut(s) 1163, 1307
AcsI RAATTY 4 cut(s) 433, 1102, 1140, 1250
AcuI CTGAAG 1 cut(s) 1479
AfaI GTAC 7 cut(s) 85, 195, 390, 615, 905, 952, 1055
AfiI CCNNNNNNNGG 5 cut(s) 50, 373, 720, 770, 1462
AgsI TTSAA 8 cut(s) 245, 433, 452, 610, 943, 1249, 1331, 1471
AhlI ACTAGT 1 cut(s) 89
AjiI CACGTC 1 cut(s) 1207
AjnI CCWGG 2 cut(s) 119, 871
AluBI AGCT 5 cut(s) 235, 420, 693, 706, 1503
AluI AGCT 5 cut(s) 235, 420, 693, 706, 1503
Alw26I GTCTC 2 cut(s) 9, 794
AlwI GGATC 2 cut(s) 1163, 1307
AlwNI CAGNNNCTG 1 cut(s) 137
AoxI GGCC 2 cut(s) 869, 1415
ApeKI GCWGC 1 cut(s) 513
ApoI RAATTY 4 cut(s) 433, 1102, 1140, 1250
AspLEI GCGC 3 cut(s) 267, 518, 1455
AspS9I GGNCC 1 cut(s) 364
AsuHPI GGTGA 2 cut(s) 141, 818
AvaII GGWCC 1 cut(s) 364
BbsI GAAGAC 3 cut(s) 76, 396, 592
BbvI GCAGC 1 cut(s) 500
BccI CCATC 2 cut(s) 163, 1029
BceAI ACGGC 1 cut(s) 23
BciT130I CCWGG 2 cut(s) 121, 873
BclI TGATCA 1 cut(s) 646
BcoDI GTCTC 2 cut(s) 9, 794
BcuI ACTAGT 1 cut(s) 89
BfaI CTAG 7 cut(s) 45, 90, 261, 954, 1025, 1211, 1431
BfmI CTRYAG 1 cut(s) 718
BfoI RGCGCY 2 cut(s) 268, 1456
BglII AGATCT 1 cut(s) 786
BisI GCNGC 4 cut(s) 24, 27, 514, 869
BlsI GCNGC 4 cut(s) 25, 28, 515, 870
BmcAI AGTACT 1 cut(s) 952
Bme1390I CCNGG 2 cut(s) 121, 873
Bme18I GGWCC 1 cut(s) 364
BmgBI CACGTC 1 cut(s) 1207
BmgT120I GGNCC 1 cut(s) 364
BmiI GGNNCC 1 cut(s) 366
BmrFI CCNGG 2 cut(s) 121, 873
BmrI ACTGGG 1 cut(s) 779
BmuI ACTGGG 1 cut(s) 779
BoxI GACNNNNGTC 1 cut(s) 987
BpiI GAAGAC 3 cut(s) 76, 396, 592
BsaJI CCNNGG 2 cut(s) 1036, 1409
BsaWI WCCGGW 1 cut(s) 968
BsaXI ACNNNNNCTCC 2 cut(s) 809, 839
Bsc4I CCNNNNNNNGG 5 cut(s) 50, 373, 720, 770, 1462
Bse118I RCCGGY 1 cut(s) 713
Bse1I ACTGG 5 cut(s) 201, 617, 774, 1307, 1424
Bse3DI GCAATG 5 cut(s) 575, 858, 892, 1234, 1354
BseBI CCWGG 2 cut(s) 121, 873
BseDI CCNNGG 2 cut(s) 1036, 1409
BseGI GGATG 4 cut(s) 760, 1056, 1240, 1393
BseLI CCNNNNNNNGG 5 cut(s) 50, 373, 720, 770, 1462
BseMI GCAATG 5 cut(s) 575, 858, 892, 1234, 1354
BseMII CTCAG 1 cut(s) 789
BseNI ACTGG 5 cut(s) 201, 617, 774, 1307, 1424
BseRI GAGGAG 1 cut(s) 22
BseXI GCAGC 1 cut(s) 500
BsgI GTGCAG 2 cut(s) 745, 803
Bsh1236I CGCG 1 cut(s) 344
BshFI GGCC 2 cut(s) 871, 1417
BsiSI CCGG 2 cut(s) 714, 969
BslFI GGGAC 1 cut(s) 350
BslI CCNNNNNNNGG 5 cut(s) 50, 373, 720, 770, 1462
BsmAI GTCTC 2 cut(s) 9, 794
BsmFI GGGAC 1 cut(s) 350
BsmI GAATGC 1 cut(s) 61
BsnI GGCC 2 cut(s) 871, 1417
Bsp143I GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
Bsp19I CCATGG 1 cut(s) 1409
Bsp68I TCGCGA 1 cut(s) 344
BspACI CCGC 7 cut(s) 21, 24, 27, 36, 868, 957, 1048
BspANI GGCC 2 cut(s) 871, 1417
BspCNI CTCAG 1 cut(s) 790
BspFNI CGCG 1 cut(s) 344
BspHI TCATGA 1 cut(s) 699
BspLI GGNNCC 1 cut(s) 366
BspPI GGATC 2 cut(s) 1163, 1307
BspQI GCTCTTC 2 cut(s) 585, 654
BsrDI GCAATG 5 cut(s) 575, 858, 892, 1234, 1354
BsrFI RCCGGY 1 cut(s) 713
BsrI ACTGG 5 cut(s) 201, 617, 774, 1307, 1424
BssAI RCCGGY 1 cut(s) 713
BssECI CCNNGG 2 cut(s) 1036, 1409
BssMI GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
BssT1I CCWWGG 2 cut(s) 1036, 1409
Bst2UI CCWGG 2 cut(s) 121, 873
Bst4CI ACNGT 5 cut(s) 644, 914, 986, 1078, 1476
Bst6I CTCTTC 6 cut(s) 585, 649, 654, 799, 1295, 1353
BstC8I GCNNGC 1 cut(s) 883
BstDEI CTNAG 3 cut(s) 564, 798, 1173
BstDSI CCRYGG 1 cut(s) 1409
BstF5I GGATG 4 cut(s) 760, 1056, 1240, 1393
BstFNI CGCG 1 cut(s) 344
BstH2I RGCGCY 2 cut(s) 268, 1456
BstHHI GCGC 3 cut(s) 267, 518, 1455
BstKTI GATC 8 cut(s) 128, 181, 649, 789, 1171, 1179, 1315, 1461
BstMAI GTCTC 2 cut(s) 9, 794
BstMBI GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
BstMWI GCNNNNNNNGC 5 cut(s) 35, 325, 723, 882, 1281
BstNI CCWGG 2 cut(s) 121, 873
BstPAI GACNNNNGTC 1 cut(s) 987
BstSCI CCNGG 2 cut(s) 119, 871
BstSFI CTRYAG 1 cut(s) 718
BstUI CGCG 1 cut(s) 344
BstV1I GCAGC 1 cut(s) 500
BstV2I GAAGAC 3 cut(s) 76, 396, 592
BstX2I RGATCY 2 cut(s) 786, 1168
BstYI RGATCY 2 cut(s) 786, 1168
BsuRI GGCC 2 cut(s) 871, 1417
BtgI CCRYGG 1 cut(s) 1409
BtrI CACGTC 1 cut(s) 1207
BtsCI GGATG 4 cut(s) 760, 1056, 1240, 1393
BtsIMutI CAGTG 1 cut(s) 624
BtuMI TCGCGA 1 cut(s) 344
Cac8I GCNNGC 1 cut(s) 883
CaiI CAGNNNCTG 1 cut(s) 137
CciI TCATGA 1 cut(s) 699
CfoI GCGC 3 cut(s) 267, 518, 1455
Cfr10I RCCGGY 1 cut(s) 713
Cfr13I GGNCC 1 cut(s) 364
Csp6I GTAC 7 cut(s) 84, 194, 389, 614, 904, 951, 1054
CspCI CAANNNNNGTGG 4 cut(s) 141, 176, 895, 930
CviAII CATG 4 cut(s) 650, 700, 1270, 1410
CviQI GTAC 7 cut(s) 84, 194, 389, 614, 904, 951, 1054
DdeI CTNAG 3 cut(s) 564, 798, 1173
DpnI GATC 8 cut(s) 127, 180, 648, 788, 1170, 1178, 1314, 1460
DpnII GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
DraI TTTAAA 1 cut(s) 112
Eam1104I CTCTTC 6 cut(s) 585, 649, 654, 799, 1295, 1353
EarI CTCTTC 6 cut(s) 585, 649, 654, 799, 1295, 1353
EciI GGCGGA 2 cut(s) 10, 25
Eco130I CCWWGG 2 cut(s) 1036, 1409
Eco47I GGWCC 1 cut(s) 364
Eco57I CTGAAG 1 cut(s) 1479
EcoRI GAATTC 1 cut(s) 1140
EcoRII CCWGG 2 cut(s) 119, 871
EcoT14I CCWWGG 2 cut(s) 1036, 1409
ErhI CCWWGG 2 cut(s) 1036, 1409
FaeI CATG 4 cut(s) 653, 703, 1273, 1413
FaqI GGGAC 1 cut(s) 350
FatI CATG 4 cut(s) 649, 699, 1269, 1409
FauNDI CATATG 1 cut(s) 1399
FbaI TGATCA 1 cut(s) 646
FblI GTMKAC 1 cut(s) 214
Fnu4HI GCNGC 4 cut(s) 24, 27, 514, 869
FokI GGATG 4 cut(s) 747, 1063, 1247, 1380
Fsp4HI GCNGC 4 cut(s) 24, 27, 514, 869
FspBI CTAG 7 cut(s) 45, 90, 261, 954, 1025, 1211, 1431
FspI TGCGCA 1 cut(s) 517
GlaI GCGC 3 cut(s) 266, 517, 1454
GluI GCNGC 4 cut(s) 24, 27, 514, 869
HaeII RGCGCY 2 cut(s) 268, 1456
HaeIII GGCC 2 cut(s) 871, 1417
HapII CCGG 2 cut(s) 714, 969
HhaI GCGC 3 cut(s) 267, 518, 1455
Hin1II CATG 4 cut(s) 653, 703, 1273, 1413
Hin6I GCGC 3 cut(s) 265, 516, 1453
HinP1I GCGC 3 cut(s) 265, 516, 1453
HincII GTYRAC 1 cut(s) 215
HindII GTYRAC 1 cut(s) 215
HindIII AAGCTT 2 cut(s) 233, 704
HinfI GANTC 5 cut(s) 134, 452, 935, 1303, 1434
HpaII CCGG 2 cut(s) 714, 969
HphI GGTGA 2 cut(s) 141, 818
Hpy166II GTNNAC 2 cut(s) 215, 635
Hpy188I TCNGA 3 cut(s) 133, 799, 1498
Hpy188III TCNNGA 7 cut(s) 343, 700, 764, 1256, 1468, 1507, 1530
Hpy8I GTNNAC 2 cut(s) 215, 635
HpyAV CCTTC 2 cut(s) 975, 1503
HpyCH4III ACNGT 5 cut(s) 644, 914, 986, 1078, 1476
HpyCH4IV ACGT 3 cut(s) 357, 1206, 1292
HpyCH4V TGCA 7 cut(s) 249, 552, 726, 784, 885, 1275, 1347
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 325, 723, 882, 1281
HpyF3I CTNAG 3 cut(s) 564, 798, 1173
HpySE526I ACGT 3 cut(s) 357, 1206, 1292
Hsp92II CATG 4 cut(s) 653, 703, 1273, 1413
HspAI GCGC 3 cut(s) 265, 516, 1453
Ksp22I TGATCA 1 cut(s) 646
Kzo9I GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
LguI GCTCTTC 2 cut(s) 585, 654
LmnI GCTCC 1 cut(s) 1450
Lsp1109I GCAGC 1 cut(s) 500
MaeI CTAG 7 cut(s) 45, 90, 261, 954, 1025, 1211, 1431
MaeII ACGT 3 cut(s) 357, 1206, 1292
MaeIII GTNAC 1 cut(s) 139
MalI GATC 8 cut(s) 127, 180, 648, 788, 1170, 1178, 1314, 1460
MboI GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
MfeI CAATTG 1 cut(s) 477
MflI RGATCY 2 cut(s) 786, 1168
MlyI GAGTC 2 cut(s) 128, 1312
MmeI TCCRAC 2 cut(s) 912, 1131
MnlI CCTC 8 cut(s) 40, 43, 74, 409, 449, 807, 1225, 1356
MseI TTAA 3 cut(s) 111, 231, 708
MslI CAYNNNNRTG 2 cut(s) 1026, 1398
MspI CCGG 2 cut(s) 714, 969
MspR9I CCNGG 2 cut(s) 121, 873
MunI CAATTG 1 cut(s) 477
Mva1269I GAATGC 1 cut(s) 61
MvaI CCWGG 2 cut(s) 121, 873
MvnI CGCG 1 cut(s) 344
MwoI GCNNNNNNNGC 5 cut(s) 35, 325, 723, 882, 1281
NcoI CCATGG 1 cut(s) 1409
NdeI CATATG 1 cut(s) 1399
NdeII GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
NlaIII CATG 4 cut(s) 653, 703, 1273, 1413
NlaIV GGNNCC 1 cut(s) 366
NruI TCGCGA 1 cut(s) 344
NsbI TGCGCA 1 cut(s) 517
PagI TCATGA 1 cut(s) 699
PciSI GCTCTTC 2 cut(s) 585, 654
PctI GAATGC 1 cut(s) 61
PfeI GAWTC 3 cut(s) 452, 935, 1434
PfoI TCCNGGA 1 cut(s) 119
PkrI GCNGC 4 cut(s) 25, 28, 515, 870
PleI GAGTC 2 cut(s) 128, 1311
PpsI GAGTC 2 cut(s) 128, 1311
PshAI GACNNNNGTC 1 cut(s) 987
PsiI TTATAA 1 cut(s) 372
Psp6I CCWGG 2 cut(s) 119, 871
PspGI CCWGG 2 cut(s) 119, 871
PspN4I GGNNCC 1 cut(s) 366
PspPI GGNCC 1 cut(s) 364
PsrI GAACNNNNNNTAC 2 cut(s) 518, 550
PstNI CAGNNNCTG 1 cut(s) 137
PsuI RGATCY 2 cut(s) 786, 1168
RruI TCGCGA 1 cut(s) 344
RsaI GTAC 7 cut(s) 85, 195, 390, 615, 905, 952, 1055
RsaNI GTAC 7 cut(s) 84, 194, 389, 614, 904, 951, 1054
RseI CAYNNNNRTG 2 cut(s) 1026, 1398
SalI GTCGAC 1 cut(s) 213
SapI GCTCTTC 2 cut(s) 585, 654
SaqAI TTAA 3 cut(s) 111, 231, 708
SatI GCNGC 4 cut(s) 24, 27, 514, 869
Sau3AI GATC 8 cut(s) 125, 178, 646, 786, 1168, 1176, 1312, 1458
Sau96I GGNCC 1 cut(s) 364
ScaI AGTACT 1 cut(s) 952
SchI GAGTC 2 cut(s) 128, 1312
ScrFI CCNGG 2 cut(s) 121, 873
SfcI CTRYAG 1 cut(s) 718
SinI GGWCC 1 cut(s) 364
SmiMI CAYNNNNRTG 2 cut(s) 1026, 1398
SpeI ACTAGT 1 cut(s) 89
SsiI CCGC 7 cut(s) 21, 24, 27, 36, 868, 957, 1048
SspI AATATT 3 cut(s) 946, 1327, 1390
SspMI CTAG 7 cut(s) 45, 90, 261, 954, 1025, 1211, 1431
StyD4I CCNGG 2 cut(s) 119, 871
StyI CCWWGG 2 cut(s) 1036, 1409
TaaI ACNGT 5 cut(s) 644, 914, 986, 1078, 1476
TaiI ACGT 3 cut(s) 360, 1209, 1295
TaqI TCGA 5 cut(s) 201, 214, 603, 835, 981
TatI WGTACW 2 cut(s) 193, 950
TauI GCSGC 3 cut(s) 26, 29, 871
TfiI GAWTC 3 cut(s) 452, 935, 1434
Tru1I TTAA 3 cut(s) 111, 231, 708
Tru9I TTAA 3 cut(s) 111, 231, 708
TscAI CASTG 1 cut(s) 624
TseI GCWGC 1 cut(s) 513
TspDTI ATGAA 8 cut(s) 279, 286, 616, 716, 847, 1359, 1371, 1382
TspGWI ACGGA 1 cut(s) 581
TspRI CASTG 1 cut(s) 624
VpaK11BI GGWCC 1 cut(s) 364
XapI RAATTY 4 cut(s) 433, 1102, 1140, 1250
XmiI GTMKAC 1 cut(s) 214
XspI CTAG 7 cut(s) 45, 90, 261, 954, 1025, 1211, 1431
ZrmI AGTACT 1 cut(s) 952
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.