Rw3G001810

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000270
Physical Location & Seq
Forward (+)
1552084 .. 1553661
1578 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G001810.1

Sequence Viewer

Length: 1578 bp
ATGGCACAACCACCACCATCAAAATCCACGATTAATAATCTCCCTGACCTTGTATTGGTCGAAATCCTTTGTCGACTCCCTCACAAAAAACTTATTTTTCGATGCAAGCTCGTGTCCAAGCGTTGGCGCACCCTCCTCTCTGATCCTTATTTTGTTAACCGCTTTCTATGCATCCAACATGATCAGCATAACCCCTTTCTGAATGATTATGTTAGTTATATGATTCCCTATAGGTATGCAAAGCATAAGACTTTGGTCCTCACCATGTCATCCGAGCCTCCTCCTCCTCCTCTGTTAGAAGCCAGCATATCAAGCATTTTCTCTTTCCTCCCTTGTTTTCAAGGCCATGAATATGCCGAGAAGGGCGATAAGCTATATGTGACAGGGACTTATAATGACTTGGTCTTGTGCTCGCCAACTAAAACTGCTCAACGTGATTACTACATATGCAACTCCTACACCAAGGAATGGATTCGTCTTCCTCCCCCCCGTTATAGACATTATTCTGATGATTTAGCAGTATCGGCAGGATTCATTTGTGATCCCTACTGCAATATTAAGGAAGACGATACTAGTAGCAACAGCGCTATCATCAAGGTTAATGCCGAGTATAGGTGCAGGATTGTGCGAATACTTCCTAACCAAGATTACAAGGGATTTGATGTGGAGATATATTCTTCCGAGACTGGTGAATGGAGGGAGTATCCATCGTCTAAGATATTATGCCAACAACGATCCTATACTACTTTTGGGTGTCCAAGCGTTGCTTGCAATGGAAAGCTGTATTGGCTGAATGACCAAGGCTCTGTTTTTGAGTTGGATCCGTTCAATATTTGTACTGGCGATGTTATTGATAAATGTCGTTTCATTGATGCACCGACCCCAGATGCACATAATTTATGTTGGCATATGGGTCTTTGTCAAGGGCGTTTGCGGATGTGCCCGTTTTTCTTTTATTGTTCTGCTAGTTATCCTATAACTATTTGGGAGTTGAAAGAAAACCAAGTGGATGGGAAACCAGAATGGTGTTTACTTCATCAAATATCTTCCCTGTCAGAGATGGTTGCAAAACAACCTTTCATCACTTTACATTTTGCAATCGTAGATTTCCACCCAGTTCATGGGGATATAGTGTACTTACAAAATAACGATATATATAGTGAGCCAAGATACATAGTCACGTGCAATGTTCGCGAAAGAACATTAGAGATAGCTACAAAAATTCCATTTGAGAATAGTCCTGGATACGCTTGGGCCCCTGAGCAGATTTGCCACAATGTGATCCCATGGTGGCCAACACCAATTCCAAAAAGACTAAACTACCACGAGGAGTACCTAAATATCACTGTGATTAGTGTAGACATCTTTACTATTAAGGTAGGTTGCTTAAGTAATGTTAAGCAATTGAAACAAAAAATTGAAGAGAAGAAAGGGCCTGGGCAGCATGAACTACATTTTGATGGGCGAGTTTTAGAAGATGATGACAAGTGGCTTGCAGATTATGGAATCAAGGACAAATCTAAGATTTACATTGGCCAACATTGTTCAAAAGAGTGGCTTGTGTCAGAGCCTCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

525

Amino Acids

60.92

Weight (kDa)

6.42

Isoelectric Point (pI)

41.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 51 2.9e-08 F-box domain
F-box-like PF12937 11 - 54 3.9e-07 F-box-like
b-prop_At3g26010-like PF24750 119 - 406 1.8e-17 F-box protein At3g26010-like, beta-propeller
ubiquitin PF00240 447 - 509 7.1e-09 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 393
AccB7I CCANNNNNTGG 3 cut(s) 123, 468, 1121
AccI GTMKAC 2 cut(s) 73, 1359
AccII CGCG 1 cut(s) 1194
AciI CCGC 2 cut(s) 160, 934
AclWI GGATC 6 cut(s) 137, 536, 729, 815, 828, 1276
AcoI YGGCCR 2 cut(s) 1292, 1534
AcsI RAATTY 1 cut(s) 1221
AcvI CACGTG 1 cut(s) 1182
AdeI CACNNNGTG 1 cut(s) 1279
AfaI GTAC 3 cut(s) 838, 1136, 1334
AfeI AGCGCT 1 cut(s) 586
AfiI CCNNNNNNNGG 5 cut(s) 55, 123, 468, 612, 1121
AflII CTTAAG 1 cut(s) 1387
AgsI TTSAA 6 cut(s) 341, 829, 994, 1408, 1421, 1548
AhlI ACTAGT 1 cut(s) 572
AjnI CCWGG 2 cut(s) 1240, 1435
AjuI GAANNNNNNNTTGG 2 cut(s) 769, 801
AluBI AGCT 4 cut(s) 109, 373, 781, 1214
AluI AGCT 4 cut(s) 109, 373, 781, 1214
Alw21I GWGCWC 1 cut(s) 413
Alw26I GTCTC 1 cut(s) 677
AlwI GGATC 6 cut(s) 137, 536, 729, 815, 828, 1276
Aor51HI AGCGCT 1 cut(s) 586
AoxI GGCC 5 cut(s) 343, 1254, 1292, 1433, 1534
ApaI GGGCCC 1 cut(s) 1258
ApeKI GCWGC 1 cut(s) 1441
ApoI RAATTY 1 cut(s) 1221
AseI ATTAAT 1 cut(s) 33
Asp700I GAANNNNTTC 1 cut(s) 471
AspLEI GCGC 2 cut(s) 129, 587
AspS9I GGNCC 4 cut(s) 256, 1254, 1255, 1433
AsuHPI GGTGA 2 cut(s) 253, 701
AvaII GGWCC 1 cut(s) 256
BaeGI GKGCMC 2 cut(s) 944, 1258
BalI TGGCCA 2 cut(s) 1294, 1536
BamHI GGATCC 1 cut(s) 820
BanII GRGCYC 1 cut(s) 1258
BauI CACGAG 2 cut(s) 110, 1325
BbrPI CACGTG 1 cut(s) 1182
BbsI GAAGAC 2 cut(s) 470, 570
Bbv12I GWGCWC 1 cut(s) 413
BbvI GCAGC 1 cut(s) 1453
BccI CCATC 5 cut(s) 25, 715, 1004, 1054, 1454
BciT130I CCWGG 2 cut(s) 1242, 1437
BciVI GTATCC 2 cut(s) 714, 1238
BclI TGATCA 1 cut(s) 181
BcoDI GTCTC 1 cut(s) 677
BcuI ACTAGT 1 cut(s) 572
BfaI CTAG 3 cut(s) 573, 966, 1576
BfmI CTRYAG 1 cut(s) 229
BfoI RGCGCY 1 cut(s) 588
BfrI CTTAAG 1 cut(s) 1387
BfuI GTATCC 2 cut(s) 714, 1238
BisI GCNGC 1 cut(s) 1442
BlsI GCNGC 1 cut(s) 1443
Bme1390I CCNGG 2 cut(s) 1242, 1437
Bme18I GGWCC 1 cut(s) 256
BmgT120I GGNCC 4 cut(s) 256, 1254, 1255, 1433
BmiI GGNNCC 3 cut(s) 822, 1256, 1257
BmrFI CCNGG 2 cut(s) 1242, 1437
BmrI ACTGGG 1 cut(s) 1109
BmsI GCATC 4 cut(s) 92, 180, 862, 877
BmuI ACTGGG 1 cut(s) 1109
BoxI GACNNNNGTC 1 cut(s) 254
BpiI GAAGAC 2 cut(s) 470, 570
Bpu10I CCTNAGC 1 cut(s) 1260
BsaAI YACGTR 1 cut(s) 1182
BsaJI CCNNGG 4 cut(s) 462, 799, 1286, 1436
Bsc4I CCNNNNNNNGG 5 cut(s) 55, 123, 468, 612, 1121
Bse1I ACTGG 3 cut(s) 691, 844, 1115
Bse3DI GCAATG 2 cut(s) 778, 1192
BseBI CCWGG 2 cut(s) 1242, 1437
BseDI CCNNGG 4 cut(s) 462, 799, 1286, 1436
BseGI GGATG 4 cut(s) 171, 269, 942, 1015
BseLI CCNNNNNNNGG 5 cut(s) 55, 123, 468, 612, 1121
BseMI GCAATG 2 cut(s) 778, 1192
BseMII CTCAG 1 cut(s) 1251
BseNI ACTGG 3 cut(s) 691, 844, 1115
BseRI GAGGAG 6 cut(s) 125, 270, 273, 276, 279, 1343
BseSI GKGCMC 2 cut(s) 944, 1258
BseXI GCAGC 1 cut(s) 1453
BsgI GTGCAG 1 cut(s) 637
Bsh1236I CGCG 1 cut(s) 1194
BshFI GGCC 5 cut(s) 345, 1256, 1294, 1435, 1536
BsiHKAI GWGCWC 1 cut(s) 413
BslFI GGGAC 1 cut(s) 400
BslI CCNNNNNNNGG 5 cut(s) 55, 123, 468, 612, 1121
BsmAI GTCTC 1 cut(s) 677
BsmFI GGGAC 1 cut(s) 400
BsnI GGCC 5 cut(s) 345, 1256, 1294, 1435, 1536
Bsp120I GGGCCC 1 cut(s) 1254
Bsp1286I GDGCHC 3 cut(s) 413, 944, 1258
Bsp143I GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
Bsp19I CCATGG 1 cut(s) 1286
Bsp68I TCGCGA 1 cut(s) 1194
BspACI CCGC 2 cut(s) 160, 934
BspANI GGCC 5 cut(s) 345, 1256, 1294, 1435, 1536
BspCNI CTCAG 1 cut(s) 1252
BspFNI CGCG 1 cut(s) 1194
BspLI GGNNCC 3 cut(s) 822, 1256, 1257
BspPI GGATC 6 cut(s) 137, 536, 729, 815, 828, 1276
BspTI CTTAAG 1 cut(s) 1387
BsrDI GCAATG 2 cut(s) 778, 1192
BsrI ACTGG 3 cut(s) 691, 844, 1115
BssECI CCNNGG 4 cut(s) 462, 799, 1286, 1436
BssMI GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
BssSI CACGAG 2 cut(s) 110, 1325
BssT1I CCWWGG 3 cut(s) 462, 799, 1286
Bst2BI CACGAG 2 cut(s) 110, 1325
Bst2UI CCWGG 2 cut(s) 1242, 1437
Bst4CI ACNGT 1 cut(s) 1348
Bst6I CTCTTC 1 cut(s) 1416
BstAFI CTTAAG 1 cut(s) 1387
BstBAI YACGTR 1 cut(s) 1182
BstC8I GCNNGC 5 cut(s) 107, 304, 413, 769, 1494
BstDEI CTNAG 3 cut(s) 714, 1260, 1521
BstDSI CCRYGG 1 cut(s) 1286
BstF5I GGATG 4 cut(s) 171, 269, 942, 1015
BstFNI CGCG 1 cut(s) 1194
BstH2I RGCGCY 1 cut(s) 588
BstHHI GCGC 2 cut(s) 129, 587
BstKTI GATC 6 cut(s) 145, 184, 544, 737, 823, 1284
BstMAI GTCTC 1 cut(s) 677
BstMBI GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
BstMWI GCNNNNNNNGC 7 cut(s) 168, 312, 524, 768, 787, 1191, 1441
BstNI CCWGG 2 cut(s) 1242, 1437
BstPAI GACNNNNGTC 1 cut(s) 254
BstSCI CCNGG 2 cut(s) 1240, 1435
BstSFI CTRYAG 1 cut(s) 229
BstSLI GKGCMC 2 cut(s) 944, 1258
BstUI CGCG 1 cut(s) 1194
BstV1I GCAGC 1 cut(s) 1453
BstV2I GAAGAC 2 cut(s) 470, 570
BstX2I RGATCY 1 cut(s) 820
BstXI CCANNNNNNTGG 1 cut(s) 1010
BstYI RGATCY 1 cut(s) 820
BsuI GTATCC 2 cut(s) 714, 1238
BsuRI GGCC 5 cut(s) 345, 1256, 1294, 1435, 1536
BtgI CCRYGG 1 cut(s) 1286
BtgZI GCGATG 1 cut(s) 858
BtsCI GGATG 4 cut(s) 171, 269, 942, 1015
BtsIMutI CAGTG 1 cut(s) 1344
BtuMI TCGCGA 1 cut(s) 1194
Cac8I GCNNGC 5 cut(s) 107, 304, 413, 769, 1494
CfoI GCGC 2 cut(s) 129, 587
Cfr13I GGNCC 4 cut(s) 256, 1254, 1255, 1433
Csp6I GTAC 3 cut(s) 837, 1135, 1333
CviAII CATG 6 cut(s) 179, 265, 347, 1121, 1287, 1445
CviQI GTAC 3 cut(s) 837, 1135, 1333
DdeI CTNAG 3 cut(s) 714, 1260, 1521
DpnI GATC 6 cut(s) 144, 183, 543, 736, 822, 1283
DpnII GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
DraIII CACNNNGTG 1 cut(s) 1279
EaeI YGGCCR 2 cut(s) 1292, 1534
Eam1104I CTCTTC 1 cut(s) 1416
EarI CTCTTC 1 cut(s) 1416
Eco130I CCWWGG 3 cut(s) 462, 799, 1286
Eco24I GRGCYC 1 cut(s) 1258
Eco47I GGWCC 1 cut(s) 256
Eco47III AGCGCT 1 cut(s) 586
Eco72I CACGTG 1 cut(s) 1182
EcoO109I RGGNCCY 2 cut(s) 1255, 1433
EcoRII CCWGG 2 cut(s) 1240, 1435
EcoT14I CCWWGG 3 cut(s) 462, 799, 1286
EcoT22I ATGCAT 1 cut(s) 173
EcoT38I GRGCYC 1 cut(s) 1258
ErhI CCWWGG 3 cut(s) 462, 799, 1286
FaeI CATG 6 cut(s) 182, 268, 350, 1124, 1290, 1448
FalI AAGNNNNNCTT 4 cut(s) 751, 783, 1542, 1574
FaqI GGGAC 1 cut(s) 400
FatI CATG 6 cut(s) 178, 264, 346, 1120, 1286, 1444
FauNDI CATATG 2 cut(s) 446, 909
FbaI TGATCA 1 cut(s) 181
FblI GTMKAC 2 cut(s) 73, 1359
Fnu4HI GCNGC 1 cut(s) 1442
FokI GGATG 4 cut(s) 158, 256, 949, 1022
FriOI GRGCYC 1 cut(s) 1258
Fsp4HI GCNGC 1 cut(s) 1442
FspBI CTAG 3 cut(s) 573, 966, 1576
GlaI GCGC 2 cut(s) 128, 586
GluI GCNGC 1 cut(s) 1442
HaeII RGCGCY 1 cut(s) 588
HaeIII GGCC 5 cut(s) 345, 1256, 1294, 1435, 1536
HhaI GCGC 2 cut(s) 129, 587
Hin1II CATG 6 cut(s) 182, 268, 350, 1124, 1290, 1448
Hin6I GCGC 2 cut(s) 127, 585
HinP1I GCGC 2 cut(s) 127, 585
HincII GTYRAC 2 cut(s) 74, 157
HindII GTYRAC 2 cut(s) 74, 157
HinfI GANTC 5 cut(s) 75, 223, 472, 531, 1506
HpaI GTTAAC 1 cut(s) 157
HphI GGTGA 2 cut(s) 253, 701
Hpy166II GTNNAC 5 cut(s) 74, 157, 1031, 1135, 1360
Hpy188I TCNGA 7 cut(s) 142, 201, 274, 508, 682, 1057, 1567
Hpy188III TCNNGA 1 cut(s) 1193
Hpy8I GTNNAC 5 cut(s) 74, 157, 1031, 1135, 1360
HpyAV CCTTC 1 cut(s) 355
HpyCH4III ACNGT 1 cut(s) 1348
HpyCH4IV ACGT 2 cut(s) 433, 1181
HpyF10VI GCNNNNNNNGC 7 cut(s) 168, 312, 524, 768, 787, 1191, 1441
HpyF3I CTNAG 3 cut(s) 714, 1260, 1521
HpySE526I ACGT 2 cut(s) 433, 1181
Hsp92II CATG 6 cut(s) 182, 268, 350, 1124, 1290, 1448
HspAI GCGC 2 cut(s) 127, 585
Ksp22I TGATCA 1 cut(s) 181
KspAI GTTAAC 1 cut(s) 157
Kzo9I GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
Lsp1109I GCAGC 1 cut(s) 1453
LweI GCATC 4 cut(s) 92, 180, 862, 877
MaeI CTAG 3 cut(s) 573, 966, 1576
MaeII ACGT 2 cut(s) 433, 1181
MaeIII GTNAC 2 cut(s) 379, 1177
MalI GATC 6 cut(s) 144, 183, 543, 736, 822, 1283
MboI GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
MboII GAAGA 7 cut(s) 470, 575, 669, 1038, 1433, 1438, 1487
MfeI CAATTG 1 cut(s) 1403
MflI RGATCY 1 cut(s) 820
MhlI GDGCHC 3 cut(s) 413, 944, 1258
MlsI TGGCCA 2 cut(s) 1294, 1536
MluCI AATT 5 cut(s) 895, 1221, 1302, 1403, 1416
MluNI TGGCCA 2 cut(s) 1294, 1536
MlyI GAGTC 1 cut(s) 69
MmeI TCCRAC 2 cut(s) 199, 798
Mox20I TGGCCA 2 cut(s) 1294, 1536
Mph1103I ATGCAT 1 cut(s) 173
MroXI GAANNNNTTC 1 cut(s) 471
MscI TGGCCA 2 cut(s) 1294, 1536
MseI TTAA 7 cut(s) 33, 156, 558, 600, 1374, 1388, 1398
MslI CAYNNNNRTG 2 cut(s) 351, 1458
Msp20I TGGCCA 2 cut(s) 1294, 1536
MspCI CTTAAG 1 cut(s) 1387
MspR9I CCNGG 2 cut(s) 1242, 1437
MunI CAATTG 1 cut(s) 1403
MvaI CCWGG 2 cut(s) 1242, 1437
MvnI CGCG 1 cut(s) 1194
MwoI GCNNNNNNNGC 7 cut(s) 168, 312, 524, 768, 787, 1191, 1441
NcoI CCATGG 1 cut(s) 1286
NdeI CATATG 2 cut(s) 446, 909
NdeII GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
NlaIII CATG 6 cut(s) 182, 268, 350, 1124, 1290, 1448
NlaIV GGNNCC 3 cut(s) 822, 1256, 1257
NmeAIII GCCGAG 2 cut(s) 382, 631
NmuCI GTSAC 2 cut(s) 379, 1177
NruI TCGCGA 1 cut(s) 1194
NsiI ATGCAT 1 cut(s) 173
PdmI GAANNNNTTC 1 cut(s) 471
PfeI GAWTC 4 cut(s) 223, 472, 531, 1506
PflFI GACNNNGTC 1 cut(s) 401
PflMI CCANNNNNTGG 3 cut(s) 123, 468, 1121
PfoI TCCNGGA 1 cut(s) 1240
PkrI GCNGC 1 cut(s) 1443
PleI GAGTC 1 cut(s) 69
PmaCI CACGTG 1 cut(s) 1182
PmlI CACGTG 1 cut(s) 1182
PpsI GAGTC 1 cut(s) 69
Ppu21I YACGTR 1 cut(s) 1182
PshAI GACNNNNGTC 1 cut(s) 254
PshBI ATTAAT 1 cut(s) 33
PsiI TTATAA 1 cut(s) 393
Psp6I CCWGG 2 cut(s) 1240, 1435
PspCI CACGTG 1 cut(s) 1182
PspGI CCWGG 2 cut(s) 1240, 1435
PspN4I GGNNCC 3 cut(s) 822, 1256, 1257
PspOMI GGGCCC 1 cut(s) 1254
PspPI GGNCC 4 cut(s) 256, 1254, 1255, 1433
PsuI RGATCY 1 cut(s) 820
PsyI GACNNNGTC 1 cut(s) 401
RruI TCGCGA 1 cut(s) 1194
RsaI GTAC 3 cut(s) 838, 1136, 1334
RsaNI GTAC 3 cut(s) 837, 1135, 1333
RseI CAYNNNNRTG 2 cut(s) 351, 1458
SalI GTCGAC 1 cut(s) 72
SaqAI TTAA 7 cut(s) 33, 156, 558, 600, 1374, 1388, 1398
SatI GCNGC 1 cut(s) 1442
Sau3AI GATC 6 cut(s) 142, 181, 541, 734, 820, 1281
Sau96I GGNCC 4 cut(s) 256, 1254, 1255, 1433
SchI GAGTC 1 cut(s) 69
ScrFI CCNGG 2 cut(s) 1242, 1437
SduI GDGCHC 3 cut(s) 413, 944, 1258
SfaNI GCATC 4 cut(s) 92, 180, 862, 877
SfcI CTRYAG 1 cut(s) 229
SinI GGWCC 1 cut(s) 256
SmiMI CAYNNNNRTG 2 cut(s) 351, 1458
SmlI CTYRAG 1 cut(s) 1387
SmoI CTYRAG 1 cut(s) 1387
SpeI ACTAGT 1 cut(s) 572
Sse9I AATT 5 cut(s) 895, 1221, 1302, 1403, 1416
SsiI CCGC 2 cut(s) 160, 934
SspI AATATT 2 cut(s) 556, 832
SspMI CTAG 3 cut(s) 573, 966, 1576
StyD4I CCNGG 2 cut(s) 1240, 1435
StyI CCWWGG 3 cut(s) 462, 799, 1286
TaaI ACNGT 1 cut(s) 1348
TaiI ACGT 2 cut(s) 436, 1184
TaqI TCGA 3 cut(s) 60, 73, 100
TasI AATT 5 cut(s) 895, 1221, 1302, 1403, 1416
TatI WGTACW 2 cut(s) 836, 1134
TfiI GAWTC 4 cut(s) 223, 472, 531, 1506
Tru1I TTAA 7 cut(s) 33, 156, 558, 600, 1374, 1388, 1398
Tru9I TTAA 7 cut(s) 33, 156, 558, 600, 1374, 1388, 1398
TscAI CASTG 1 cut(s) 1351
TseFI GTSAC 2 cut(s) 379, 1177
TseI GCWGC 1 cut(s) 1441
Tsp45I GTSAC 2 cut(s) 379, 1177
TspDTI ATGAA 7 cut(s) 363, 523, 856, 1025, 1069, 1109, 1461
TspGWI ACGGA 1 cut(s) 813
TspRI CASTG 1 cut(s) 1351
Tth111I GACNNNGTC 1 cut(s) 401
Van91I CCANNNNNTGG 3 cut(s) 123, 468, 1121
Vha464I CTTAAG 1 cut(s) 1387
VpaK11BI GGWCC 1 cut(s) 256
VspI ATTAAT 1 cut(s) 33
XapI RAATTY 1 cut(s) 1221
XcmI CCANNNNNNNNNTGG 1 cut(s) 1118
XmiI GTMKAC 2 cut(s) 73, 1359
XmnI GAANNNNTTC 1 cut(s) 471
XspI CTAG 3 cut(s) 573, 966, 1576
Zsp2I ATGCAT 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.