Rmu_sc0004404.1_g000016

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004404.1
OG0000270
Physical Location & Seq
Reverse (-)
64426 .. 65973
1548 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004404.1_g000016.1.cds

Sequence Viewer

Length: 1548 bp
atgagacctggtgagagtgcgtccaacagaagctggggggcaatgtctgaatctctaggggtagtgccctccaagtctgagtctcatgagttccagtacttaaaaagatcaaaaacatcaccaccaatacatcgctcaaacttcaggattaatattgatgatctccctgaccctctattgtttgaaattcttcttcgacttccggtaaagtccgcagctcggtacaagtgtgtgtcaaggcgttggttctctctcatctcccatcatacttttctttctcgttttctgtgtctccaacgtgataaacgaaaacccttgcccatgaaacctactctcatattgtcgaatgaaaaggaattttttgccatctccgagattccgatgttcaaaacaggctgcttctctcttgattttctcccttgttatcaatctacaaaaaaacaaaaagcaacagatgattttccagttgtggtagaatcgtgtaatgacttggtgttgtgttgcgcatccacgaaatatcaacgtgattactacatctgcaatccatacaccaagcaatggactgctcttcctccagcccctcaatgccgctatgaagtaagagtgggattcacttgcgatccctactattactataaagaagatgttgacaaaagagaaaaagatggtaatagtatttgtagtagtaccatccagcttaatgttgactacaagtatgcaattgtgcgtatacttcaaccatcactgcattggcttaattcctcggaactcaacgtggagatcttctcttctgagactggtaaatggacagagtcggttgttttgtgcccaccaaacttacgttttgatggattgcgttacaatccaggcgttgcttacaagggaaagttgtattgggtgcatgaatctcaccactgtatgatgatcgcgttggatcccttctcgttcagtaacaacactaataatagtactactgatcgtaaatactattttcatgtcgttgatcttccttctgaggagtggggaacaataagtgtgagccaagagggacgtcttcggttgtgtaggggccttttgtttggagatggagatattgaacatttgaggaaacgtctgagtatttgggagttgaaagatgacgatgacgacaaggctgacggtagcgttgggaagtggtgtatgataaatacccctcctctggacaaaatggtttcggaaaatccattggtcaccgaatggagccgctcaagtgatcctgctgtggcagtagctttcgaccccaataatgatgacattttgtatgtaacatcgtatgacgaaattattatgtgcaacattcgtgcaaatacattgaaggaggttacaaccattgacggttggttaacctctgttttccgattcatggtgccatggtggccgacaccggttcctaaaattgagtacaacaaccacgagaatctgcatgcagcccatcttaacagttgtcttgtatgctcgtggcagcctctggatcccaatttgcttcttgcactagtatatggagaataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

515

Amino Acids

59.42

Weight (kDa)

6.26

Isoelectric Point (pI)

47.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1054
Acc16I TGCGCA 1 cut(s) 505
AccB1I GGYRCC 1 cut(s) 1405
AccB7I CCANNNNNTGG 1 cut(s) 558
AccBSI CCGCTC 1 cut(s) 1245
AccI GTMKAC 1 cut(s) 730
AccII CGCG 1 cut(s) 929
AciI CCGC 3 cut(s) 213, 589, 1243
AclWI GGATC 6 cut(s) 614, 929, 942, 1247, 1505, 1518
AcoI YGGCCR 1 cut(s) 1415
AcsI RAATTY 2 cut(s) 186, 356
AcuI CTGAAG 1 cut(s) 127
AcyI GRCGYC 1 cut(s) 1051
AfaI GTAC 5 cut(s) 98, 224, 688, 970, 1442
AfiI CCNNNNNNNGG 4 cut(s) 219, 558, 1198, 1402
AgeI ACCGGT 1 cut(s) 1423
AgsI TTSAA 6 cut(s) 185, 388, 737, 1097, 1132, 1354
AhlI ACTAGT 1 cut(s) 1531
AjnI CCWGG 2 cut(s) 7, 865
AjuI GAANNNNNNNTTGG 2 cut(s) 877, 909
AluBI AGCT 4 cut(s) 33, 218, 697, 1271
AluI AGCT 4 cut(s) 33, 218, 697, 1271
Alw26I GTCTC 3 cut(s) 87, 296, 788
AlwI GGATC 6 cut(s) 614, 929, 942, 1247, 1505, 1518
AlwNI CAGNNNCTG 2 cut(s) 33, 1507
AoxI GGCC 2 cut(s) 1069, 1415
ApeKI GCWGC 4 cut(s) 215, 396, 1466, 1501
ApoI RAATTY 2 cut(s) 186, 356
AseI ATTAAT 1 cut(s) 150
AsiGI ACCGGT 1 cut(s) 1423
Asp700I GAANNNNTTC 1 cut(s) 189
AspLEI GCGC 1 cut(s) 506
AspS9I GGNCC 1 cut(s) 1069
AsuHPI GGTGA 4 cut(s) 23, 111, 902, 1222
BaeGI GKGCMC 2 cut(s) 69, 830
BaeI ACNNNNGTAYC 2 cut(s) 214, 247
BamHI GGATCC 2 cut(s) 934, 1510
BanI GGYRCC 1 cut(s) 1405
BauI CACGAG 2 cut(s) 1451, 1495
BbsI GAAGAC 1 cut(s) 1046
BbvI GCAGC 4 cut(s) 227, 383, 1478, 1513
BccI CCATC 8 cut(s) 270, 374, 659, 698, 748, 842, 1079, 1479
BciT130I CCWGG 2 cut(s) 9, 867
BcoDI GTCTC 3 cut(s) 87, 296, 788
BcuI ACTAGT 1 cut(s) 1531
BfaI CTAG 2 cut(s) 56, 1532
BglI GCCNNNNNGGC 1 cut(s) 1414
BglII AGATCT 1 cut(s) 780
BisI GCNGC 6 cut(s) 216, 397, 589, 1243, 1467, 1502
BlsI GCNGC 6 cut(s) 217, 398, 590, 1244, 1468, 1503
BmcAI AGTACT 2 cut(s) 98, 970
Bme1390I CCNGG 2 cut(s) 9, 867
BmgT120I GGNCC 1 cut(s) 1069
BmiI GGNNCC 6 cut(s) 936, 1070, 1241, 1407, 1428, 1512
BmrFI CCNGG 2 cut(s) 9, 867
BmsI GCATC 1 cut(s) 515
BpiI GAAGAC 1 cut(s) 1046
BplI GAGNNNNNCTC 2 cut(s) 770, 802
BpmI CTGGAG 1 cut(s) 558
BpuEI CTTGAG 1 cut(s) 1231
BsaHI GRCGYC 1 cut(s) 1051
BsaJI CCNNGG 2 cut(s) 762, 1409
BsaWI WCCGGW 2 cut(s) 202, 1423
Bsc4I CCNNNNNNNGG 4 cut(s) 219, 558, 1198, 1402
Bse118I RCCGGY 1 cut(s) 1423
Bse1I ACTGG 3 cut(s) 94, 464, 802
Bse3DI GCAATG 2 cut(s) 48, 563
BseBI CCWGG 2 cut(s) 9, 867
BseDI CCNNGG 2 cut(s) 762, 1409
BseGI GGATG 2 cut(s) 506, 690
BseLI CCNNNNNNNGG 4 cut(s) 219, 558, 1198, 1402
BseMI GCAATG 2 cut(s) 48, 563
BseMII CTCAG 4 cut(s) 69, 783, 1005, 1106
BseNI ACTGG 3 cut(s) 94, 464, 802
BseRI GAGGAG 2 cut(s) 1031, 1185
BseSI GKGCMC 2 cut(s) 69, 830
BseXI GCAGC 4 cut(s) 227, 383, 1478, 1513
BseYI CCCAGC 1 cut(s) 33
Bsh1236I CGCG 1 cut(s) 929
BshFI GGCC 2 cut(s) 1071, 1417
BshNI GGYRCC 1 cut(s) 1405
BshTI ACCGGT 1 cut(s) 1423
BsiSI CCGG 2 cut(s) 203, 1424
BslFI GGGAC 1 cut(s) 1062
BslI CCNNNNNNNGG 4 cut(s) 219, 558, 1198, 1402
BsmAI GTCTC 3 cut(s) 87, 296, 788
BsmFI GGGAC 1 cut(s) 1062
BsnI GGCC 2 cut(s) 1071, 1417
Bsp1286I GDGCHC 2 cut(s) 69, 830
Bsp19I CCATGG 1 cut(s) 1409
BspACI CCGC 3 cut(s) 213, 589, 1243
BspANI GGCC 2 cut(s) 1071, 1417
BspCNI CTCAG 4 cut(s) 70, 784, 1006, 1107
BspFNI CGCG 1 cut(s) 929
BspHI TCATGA 1 cut(s) 85
BspLI GGNNCC 6 cut(s) 936, 1070, 1241, 1407, 1428, 1512
BspPI GGATC 6 cut(s) 614, 929, 942, 1247, 1505, 1518
BspQI GCTCTTC 1 cut(s) 573
BspT107I GGYRCC 1 cut(s) 1405
BsrBI CCGCTC 1 cut(s) 1245
BsrDI GCAATG 2 cut(s) 48, 563
BsrFI RCCGGY 1 cut(s) 1423
BsrI ACTGG 3 cut(s) 94, 464, 802
BssAI RCCGGY 1 cut(s) 1423
BssECI CCNNGG 2 cut(s) 762, 1409
BssNAI GTATAC 1 cut(s) 731
BssNI GRCGYC 1 cut(s) 1051
BssSI CACGAG 2 cut(s) 1451, 1495
BssT1I CCWWGG 1 cut(s) 1409
Bst1107I GTATAC 1 cut(s) 731
Bst2BI CACGAG 2 cut(s) 1451, 1495
Bst2UI CCWGG 2 cut(s) 9, 867
Bst4CI ACNGT 4 cut(s) 917, 1160, 1376, 1481
Bst6I CTCTTC 2 cut(s) 573, 793
BstACI GRCGYC 1 cut(s) 1051
BstC8I GCNNGC 1 cut(s) 1464
BstDEI CTNAG 4 cut(s) 78, 792, 1014, 1115
BstDSI CCRYGG 1 cut(s) 1409
BstEII GGTNACC 1 cut(s) 1228
BstF5I GGATG 2 cut(s) 506, 690
BstFNI CGCG 1 cut(s) 929
BstHHI GCGC 1 cut(s) 506
BstMAI GTCTC 3 cut(s) 87, 296, 788
BstMWI GCNNNNNNNGC 1 cut(s) 1414
BstNI CCWGG 2 cut(s) 9, 867
BstNSI RCATGY 1 cut(s) 1466
BstPI GGTNACC 1 cut(s) 1228
BstSCI CCNGG 2 cut(s) 7, 865
BstSLI GKGCMC 2 cut(s) 69, 830
BstUI CGCG 1 cut(s) 929
BstV1I GCAGC 4 cut(s) 227, 383, 1478, 1513
BstV2I GAAGAC 1 cut(s) 1046
BstX2I RGATCY 3 cut(s) 780, 934, 1510
BstYI RGATCY 3 cut(s) 780, 934, 1510
BstZ17I GTATAC 1 cut(s) 731
BsuRI GGCC 2 cut(s) 1071, 1417
BtgI CCRYGG 1 cut(s) 1409
BtgZI GCGATG 1 cut(s) 116
BtsCI GGATG 2 cut(s) 506, 690
BtsI GCAGTG 1 cut(s) 743
BtsIMutI CAGTG 2 cut(s) 743, 913
Cac8I GCNNGC 1 cut(s) 1464
CaiI CAGNNNCTG 2 cut(s) 33, 1507
CciI TCATGA 1 cut(s) 85
CfoI GCGC 1 cut(s) 506
Cfr10I RCCGGY 1 cut(s) 1423
Cfr13I GGNCC 1 cut(s) 1069
CseI GACGC 1 cut(s) 9
CsiI ACCWGGT 1 cut(s) 7
Csp6I GTAC 5 cut(s) 97, 223, 687, 969, 1441
CspAI ACCGGT 1 cut(s) 1423
CviAII CATG 7 cut(s) 86, 322, 902, 995, 1402, 1410, 1463
CviQI GTAC 5 cut(s) 97, 223, 687, 969, 1441
DdeI CTNAG 4 cut(s) 78, 792, 1014, 1115
EaeI YGGCCR 1 cut(s) 1415
Eam1104I CTCTTC 2 cut(s) 573, 793
EarI CTCTTC 2 cut(s) 573, 793
Eco130I CCWWGG 1 cut(s) 1409
Eco57I CTGAAG 1 cut(s) 127
Eco91I GGTNACC 1 cut(s) 1228
EcoO109I RGGNCCY 1 cut(s) 1069
EcoO65I GGTNACC 1 cut(s) 1228
EcoRII CCWGG 2 cut(s) 7, 865
EcoT14I CCWWGG 1 cut(s) 1409
ErhI CCWWGG 1 cut(s) 1409
FaeI CATG 7 cut(s) 89, 325, 905, 998, 1405, 1413, 1466
FaqI GGGAC 1 cut(s) 1062
FatI CATG 7 cut(s) 85, 321, 901, 994, 1401, 1409, 1462
FblI GTMKAC 1 cut(s) 730
Fnu4HI GCNGC 6 cut(s) 216, 397, 589, 1243, 1467, 1502
FokI GGATG 2 cut(s) 493, 677
Fsp4HI GCNGC 6 cut(s) 216, 397, 589, 1243, 1467, 1502
FspBI CTAG 2 cut(s) 56, 1532
FspI TGCGCA 1 cut(s) 505
GlaI GCGC 1 cut(s) 505
GluI GCNGC 6 cut(s) 216, 397, 589, 1243, 1467, 1502
GsaI CCCAGC 1 cut(s) 37
GsuI CTGGAG 1 cut(s) 558
HaeIII GGCC 2 cut(s) 1071, 1417
HapII CCGG 2 cut(s) 203, 1424
HgaI GACGC 1 cut(s) 9
HhaI GCGC 1 cut(s) 506
Hin1I GRCGYC 1 cut(s) 1051
Hin1II CATG 7 cut(s) 89, 325, 905, 998, 1405, 1413, 1466
Hin6I GCGC 1 cut(s) 504
HinP1I GCGC 1 cut(s) 504
HincII GTYRAC 3 cut(s) 649, 706, 1383
HindII GTYRAC 3 cut(s) 649, 706, 1383
HinfI GANTC 9 cut(s) 50, 80, 376, 476, 609, 812, 905, 1398, 1456
HpaI GTTAAC 1 cut(s) 1383
HpaII CCGG 2 cut(s) 203, 1424
HphI GGTGA 4 cut(s) 23, 111, 902, 1222
Hpy166II GTNNAC 4 cut(s) 649, 706, 731, 1383
Hpy188III TCNNGA 5 cut(s) 86, 145, 407, 1199, 1508
Hpy8I GTNNAC 4 cut(s) 649, 706, 731, 1383
HpyAV CCTTC 3 cut(s) 949, 1020, 1348
HpyCH4III ACNGT 4 cut(s) 917, 1160, 1376, 1481
HpyCH4IV ACGT 6 cut(s) 298, 523, 774, 841, 1051, 1111
HpyCH4V TGCA 9 cut(s) 540, 719, 748, 901, 1332, 1343, 1462, 1466, 1529
HpyF10VI GCNNNNNNNGC 1 cut(s) 1414
HpyF3I CTNAG 4 cut(s) 78, 792, 1014, 1115
HpySE526I ACGT 6 cut(s) 298, 523, 774, 841, 1051, 1111
Hsp92I GRCGYC 1 cut(s) 1051
Hsp92II CATG 7 cut(s) 89, 325, 905, 998, 1405, 1413, 1466
HspAI GCGC 1 cut(s) 504
KspAI GTTAAC 1 cut(s) 1383
LguI GCTCTTC 1 cut(s) 573
LmnI GCTCC 1 cut(s) 1239
Lsp1109I GCAGC 4 cut(s) 227, 383, 1478, 1513
LweI GCATC 1 cut(s) 515
MabI ACCWGGT 1 cut(s) 7
MaeI CTAG 2 cut(s) 56, 1532
MaeII ACGT 6 cut(s) 298, 523, 774, 841, 1051, 1111
MaeIII GTNAC 5 cut(s) 857, 950, 1228, 1303, 1360
MbiI CCGCTC 1 cut(s) 1245
MboII GAAGA 8 cut(s) 182, 185, 560, 653, 775, 780, 998, 1046
MfeI CAATTG 1 cut(s) 720
MflI RGATCY 3 cut(s) 780, 934, 1510
MhlI GDGCHC 2 cut(s) 69, 830
MluCI AATT 7 cut(s) 186, 356, 720, 757, 1320, 1434, 1516
MlyI GAGTC 2 cut(s) 89, 821
MmeI TCCRAC 3 cut(s) 48, 319, 912
MroXI GAANNNNTTC 1 cut(s) 189
MseI TTAA 6 cut(s) 101, 150, 699, 756, 1382, 1476
MspI CCGG 2 cut(s) 203, 1424
MspR9I CCNGG 2 cut(s) 9, 867
MunI CAATTG 1 cut(s) 720
MvaI CCWGG 2 cut(s) 9, 867
MvnI CGCG 1 cut(s) 929
MwoI GCNNNNNNNGC 1 cut(s) 1414
NcoI CCATGG 1 cut(s) 1409
NlaIII CATG 7 cut(s) 89, 325, 905, 998, 1405, 1413, 1466
NlaIV GGNNCC 6 cut(s) 936, 1070, 1241, 1407, 1428, 1512
NmuCI GTSAC 1 cut(s) 1228
NsbI TGCGCA 1 cut(s) 505
NspI RCATGY 1 cut(s) 1466
PaeI GCATGC 1 cut(s) 1466
PagI TCATGA 1 cut(s) 85
PciSI GCTCTTC 1 cut(s) 573
PcsI WCGNNNNNNNCGW 1 cut(s) 304
PdmI GAANNNNTTC 1 cut(s) 189
PfeI GAWTC 7 cut(s) 50, 376, 476, 609, 905, 1398, 1456
PflFI GACNNNGTC 1 cut(s) 811
PflMI CCANNNNNTGG 1 cut(s) 558
PinAI ACCGGT 1 cut(s) 1423
PkrI GCNGC 6 cut(s) 217, 398, 590, 1244, 1468, 1503
PleI GAGTC 2 cut(s) 88, 820
PpsI GAGTC 2 cut(s) 88, 820
PshBI ATTAAT 1 cut(s) 150
Psp6I CCWGG 2 cut(s) 7, 865
PspEI GGTNACC 1 cut(s) 1228
PspFI CCCAGC 1 cut(s) 33
PspGI CCWGG 2 cut(s) 7, 865
PspN4I GGNNCC 6 cut(s) 936, 1070, 1241, 1407, 1428, 1512
PspPI GGNCC 1 cut(s) 1069
PstNI CAGNNNCTG 2 cut(s) 33, 1507
PsuI RGATCY 3 cut(s) 780, 934, 1510
PsyI GACNNNGTC 1 cut(s) 811
RsaI GTAC 5 cut(s) 98, 224, 688, 970, 1442
RsaNI GTAC 5 cut(s) 97, 223, 687, 969, 1441
SapI GCTCTTC 1 cut(s) 573
SaqAI TTAA 6 cut(s) 101, 150, 699, 756, 1382, 1476
SatI GCNGC 6 cut(s) 216, 397, 589, 1243, 1467, 1502
Sau96I GGNCC 1 cut(s) 1069
ScaI AGTACT 2 cut(s) 98, 970
SchI GAGTC 2 cut(s) 89, 821
ScrFI CCNGG 2 cut(s) 9, 867
SduI GDGCHC 2 cut(s) 69, 830
SexAI ACCWGGT 1 cut(s) 7
SfaNI GCATC 1 cut(s) 515
SmlI CTYRAG 1 cut(s) 1246
SmoI CTYRAG 1 cut(s) 1246
SpeI ACTAGT 1 cut(s) 1531
SphI GCATGC 1 cut(s) 1466
Sse9I AATT 7 cut(s) 186, 356, 720, 757, 1320, 1434, 1516
SsiI CCGC 3 cut(s) 213, 589, 1243
SspI AATATT 1 cut(s) 154
SspMI CTAG 2 cut(s) 56, 1532
StyD4I CCNGG 2 cut(s) 7, 865
StyI CCWWGG 1 cut(s) 1409
TaaI ACNGT 4 cut(s) 917, 1160, 1376, 1481
TaiI ACGT 6 cut(s) 301, 526, 777, 844, 1054, 1114
TaqI TCGA 3 cut(s) 196, 344, 1275
TasI AATT 7 cut(s) 186, 356, 720, 757, 1320, 1434, 1516
TatI WGTACW 3 cut(s) 96, 968, 1440
TauI GCSGC 2 cut(s) 591, 1245
TfiI GAWTC 7 cut(s) 50, 376, 476, 609, 905, 1398, 1456
Tru1I TTAA 6 cut(s) 101, 150, 699, 756, 1382, 1476
Tru9I TTAA 6 cut(s) 101, 150, 699, 756, 1382, 1476
TscAI CASTG 2 cut(s) 750, 920
TseFI GTSAC 1 cut(s) 1228
TseI GCWGC 4 cut(s) 215, 396, 1466, 1501
Tsp45I GTSAC 1 cut(s) 1228
TspDTI ATGAA 6 cut(s) 338, 363, 609, 918, 983, 1390
TspRI CASTG 2 cut(s) 750, 920
Tth111I GACNNNGTC 1 cut(s) 811
Van91I CCANNNNNTGG 1 cut(s) 558
VspI ATTAAT 1 cut(s) 150
XapI RAATTY 2 cut(s) 186, 356
XceI RCATGY 1 cut(s) 1466
XcmI CCANNNNNNNNNTGG 1 cut(s) 747
XmiI GTMKAC 1 cut(s) 730
XmnI GAANNNNTTC 1 cut(s) 189
XspI CTAG 2 cut(s) 56, 1532
ZraI GACGTC 1 cut(s) 1052
ZrmI AGTACT 2 cut(s) 98, 970
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.