Rw3G002050

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000270
Physical Location & Seq
Forward (+)
1793021 .. 1794657
1637 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G002050.1

Sequence Viewer

Length: 1428 bp
ATGATTACTATTGATGATCTTCCCGACCTTGTATTTTTTGATATCCTTCTCCGACTTCCCTTAAAATCTGCCACTCAATGCAAGTGTGTGTCCAAGCATTGGTTCGCTCTTATCTCCAGCCATTATTTTCTTTCCCGTTTTCTCTCTCTCCAATATGATAACCAAAAGTCGCTGCCCAGTACTCTCATCTTCTGGGATACCGAGAACCAGACTAAAATTTTTTCCATCTCCAAACTTTCTATGTTCAAAAAAGGCCGCTTCTCTCTCAATTTCCTCCCTCGTTATCAATCAGCAGCTCATGAAAAACAATTAGCTTTTCGGCCAGTTGTGGTAGGCTCGTGTAATGACTTAGTTCTCTGCTGCGCAACCACTTATTCACAGCGTGATTATTACATCTGCAATCCATACACCAAGCAATGGGTTGTTCTTCCTCCCGTCCCACATTGCCGGCTCCAGGTAAGAGTTGGTTTCATATGTGAACCGTACTATTACCGTAATCCAAGAGAAGAAAATAATACTAGTTACAACATCCATCTTAATGTTGACTACAGGTATGCGATTGTGCGAATACTTGAACCAGTTGAGCTAAGGAGTAATGTTTTTTCCTTCGAACTCCTGGTGCAAATCTTCTCTTCTGAGACCGGTAAGTGGACAGAGTTGGTTGTGCTGAGCCCAAGAAGCTATTGTTTTGATCATTTGGTTAACAATCCAGGCCTTGTTTACAAGGGAATGTTATATTGGTCGTCTAAATGTGACGGCTATATGATTGGCTTGGATCCTTTCTTCAACAACACCACTAAATCTAATATTAGTAATTTCAACAACACCACTAATATTAGTAATACTAATGATCATAGACAATGTCATGTCATTGATTTTCCTAATGGGGAGCCAGGATCAATAAGTGTGAGCCGAGGAGGATGTCTGCGGATGCACAGGGTTTCAGAAGTTGAGGTGGCAAGATTTCGAGACGAATATGTTGCGAGTGTTTGGGAGATGAAAGATGATGGTGAGCATAATGTTGACGGAGGACGTGCTGGAAAATGGTGTTTGATAAGCACCATTTCGCTGGACAGAATTGGTTCGGAAAACCCATTGATCACCGAATGGAGTCCCCTCATTAGAAGAAGGGCTTGGGGGCTGGCTTTCGACCCCAATGATGATGATATCTTGTATCTAGAATTGTATGATCTATATGAAAAATCGGATCACCACATTGTTACGTGCAACATCCGTACAAAAACACTCAAGGTGGCTAAAACGACTTCAATTCGTGGGGTGATTGGTGTAATACCATTCACGGTGCCATGGTTGCCGACACCGGTTCCTAGACTTGAATACAACAACCACAAGGATATGCATGCCGCCCATTTTAGCAATTGTTGGTGGTGTACCGGCCGGCGAGAGCGAGGAGCTAGGTTTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

475

Amino Acids

55.11

Weight (kDa)

8.25

Isoelectric Point (pI)

41.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 44 6.5e-07 F-box domain
b-prop_At3g26010-like PF24750 103 - 422 9e-16 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 364
AccB1I GGYRCC 1 cut(s) 1303
AccB7I CCANNNNNTGG 2 cut(s) 99, 417
AciI CCGC 3 cut(s) 256, 928, 1365
AclWI GGATC 4 cut(s) 770, 783, 904, 1215
AcoI YGGCCR 2 cut(s) 320, 1396
AcsI RAATTY 1 cut(s) 216
AdeI CACNNNGTG 1 cut(s) 383
AfaI GTAC 4 cut(s) 181, 485, 1237, 1393
AfiI CCNNNNNNNGG 4 cut(s) 99, 417, 454, 648
AgeI ACCGGT 2 cut(s) 641, 1321
AgsI TTSAA 7 cut(s) 247, 575, 787, 820, 1269, 1337, 1424
AhlI ACTAGT 1 cut(s) 518
AjiI CACGTC 1 cut(s) 1034
AjnI CCWGG 4 cut(s) 453, 615, 709, 892
AjuI GAANNNNNNNTTGG 6 cut(s) 86, 118, 721, 753, 1117, 1149
AluBI AGCT 5 cut(s) 296, 314, 586, 681, 1415
AluI AGCT 5 cut(s) 296, 314, 586, 681, 1415
Alw26I GTCTC 2 cut(s) 632, 963
AlwI GGATC 4 cut(s) 770, 783, 904, 1215
AoxI GGCC 4 cut(s) 253, 320, 712, 1396
ApeKI GCWGC 3 cut(s) 172, 293, 360
ApoI RAATTY 1 cut(s) 216
AsiGI ACCGGT 2 cut(s) 641, 1321
Asp700I GAANNNNTTC 1 cut(s) 1081
AspLEI GCGC 1 cut(s) 365
AsuHPI GGTGA 4 cut(s) 1022, 1093, 1202, 1291
AsuII TTCGAA 1 cut(s) 609
BamHI GGATCC 1 cut(s) 775
BanI GGYRCC 1 cut(s) 1303
BanII GRGCYC 1 cut(s) 674
BauI CACGAG 1 cut(s) 337
BbvI GCAGC 3 cut(s) 159, 305, 347
BccI CCATC 3 cut(s) 233, 540, 1001
BceAI ACGGC 1 cut(s) 772
BcgI CGANNNNNNTGC 2 cut(s) 962, 996
BciT130I CCWGG 4 cut(s) 455, 617, 711, 894
BciVI GTATCC 1 cut(s) 190
BclI TGATCA 3 cut(s) 691, 850, 1098
BcoDI GTCTC 2 cut(s) 632, 963
BcuI ACTAGT 1 cut(s) 518
BfaI CTAG 4 cut(s) 519, 1178, 1329, 1416
BfmI CTRYAG 1 cut(s) 547
BfuI GTATCC 1 cut(s) 190
BisI GCNGC 5 cut(s) 173, 256, 294, 361, 1365
BlpI GCTNAGC 1 cut(s) 668
BlsI GCNGC 5 cut(s) 174, 257, 295, 362, 1366
BmcAI AGTACT 1 cut(s) 181
Bme1390I CCNGG 4 cut(s) 455, 617, 711, 894
BmgBI CACGTC 1 cut(s) 1034
BmiI GGNNCC 5 cut(s) 452, 777, 891, 1305, 1326
BmrFI CCNGG 4 cut(s) 455, 617, 711, 894
BmrI ACTGGG 1 cut(s) 171
BmsI GCATC 1 cut(s) 921
BmuI ACTGGG 1 cut(s) 171
BpmI CTGGAG 2 cut(s) 100, 437
Bpu10I CCTNAGC 1 cut(s) 587
Bpu1102I GCTNAGC 1 cut(s) 668
Bpu14I TTCGAA 1 cut(s) 609
BpuEI CTTGAG 1 cut(s) 1232
BsaAI YACGTR 1 cut(s) 1224
BsaI GGTCTC 1 cut(s) 632
BsaJI CCNNGG 2 cut(s) 913, 1307
BsaWI WCCGGW 2 cut(s) 641, 1321
Bsc4I CCNNNNNNNGG 4 cut(s) 99, 417, 454, 648
Bse118I RCCGGY 5 cut(s) 447, 641, 1321, 1394, 1398
Bse1I ACTGG 3 cut(s) 177, 323, 578
Bse3DI GCAATG 2 cut(s) 422, 442
BseBI CCWGG 4 cut(s) 455, 617, 711, 894
BseDI CCNNGG 2 cut(s) 913, 1307
BseGI GGATG 4 cut(s) 528, 926, 936, 1230
BseLI CCNNNNNNNGG 4 cut(s) 99, 417, 454, 648
BseMI GCAATG 2 cut(s) 422, 442
BseMII CTCAG 2 cut(s) 627, 659
BseNI ACTGG 3 cut(s) 177, 323, 578
BseRI GAGGAG 2 cut(s) 930, 1425
BseX3I CGGCCG 1 cut(s) 1396
BseXI GCAGC 3 cut(s) 159, 305, 347
Bsh1285I CGRYCG 1 cut(s) 1399
BshFI GGCC 4 cut(s) 255, 322, 714, 1398
BshNI GGYRCC 1 cut(s) 1303
BshTI ACCGGT 2 cut(s) 641, 1321
BsiEI CGRYCG 1 cut(s) 1399
BsiSI CCGG 5 cut(s) 448, 642, 1322, 1395, 1399
BslFI GGGAC 2 cut(s) 422, 1098
BslI CCNNNNNNNGG 4 cut(s) 99, 417, 454, 648
BsmAI GTCTC 2 cut(s) 632, 963
BsmBI CGTCTC 1 cut(s) 963
BsmFI GGGAC 2 cut(s) 422, 1098
BsnI GGCC 4 cut(s) 255, 322, 714, 1398
Bso31I GGTCTC 1 cut(s) 632
Bsp119I TTCGAA 1 cut(s) 609
Bsp1286I GDGCHC 1 cut(s) 674
Bsp143I GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
Bsp1720I GCTNAGC 1 cut(s) 668
Bsp19I CCATGG 1 cut(s) 1307
BspACI CCGC 3 cut(s) 256, 928, 1365
BspANI GGCC 4 cut(s) 255, 322, 714, 1398
BspCNI CTCAG 2 cut(s) 628, 660
BspHI TCATGA 1 cut(s) 298
BspLI GGNNCC 5 cut(s) 452, 777, 891, 1305, 1326
BspPI GGATC 4 cut(s) 770, 783, 904, 1215
BspT104I TTCGAA 1 cut(s) 609
BspT107I GGYRCC 1 cut(s) 1303
BspTNI GGTCTC 1 cut(s) 632
BsrDI GCAATG 2 cut(s) 422, 442
BsrFI RCCGGY 5 cut(s) 447, 641, 1321, 1394, 1398
BsrI ACTGG 3 cut(s) 177, 323, 578
BssAI RCCGGY 5 cut(s) 447, 641, 1321, 1394, 1398
BssECI CCNNGG 2 cut(s) 913, 1307
BssMI GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
BssSI CACGAG 1 cut(s) 337
BssT1I CCWWGG 1 cut(s) 1307
Bst2BI CACGAG 1 cut(s) 337
Bst2UI CCWGG 4 cut(s) 455, 617, 711, 894
Bst4CI ACNGT 3 cut(s) 483, 494, 1303
Bst6I CTCTTC 1 cut(s) 637
BstBAI YACGTR 1 cut(s) 1224
BstBI TTCGAA 1 cut(s) 609
BstC8I GCNNGC 4 cut(s) 449, 1143, 1362, 1400
BstDEI CTNAG 4 cut(s) 349, 587, 636, 668
BstDSI CCRYGG 1 cut(s) 1307
BstF5I GGATG 4 cut(s) 528, 926, 936, 1230
BstHHI GCGC 1 cut(s) 365
BstKTI GATC 8 cut(s) 19, 694, 778, 853, 899, 1101, 1192, 1210
BstMAI GTCTC 2 cut(s) 632, 963
BstMBI GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
BstMCI CGRYCG 1 cut(s) 1399
BstMWI GCNNNNNNNGC 2 cut(s) 678, 1312
BstNI CCWGG 4 cut(s) 455, 617, 711, 894
BstNSI RCATGY 1 cut(s) 1364
BstSCI CCNGG 4 cut(s) 453, 615, 709, 892
BstSFI CTRYAG 1 cut(s) 547
BstV1I GCAGC 3 cut(s) 159, 305, 347
BstX2I RGATCY 1 cut(s) 775
BstXI CCANNNNNNTGG 1 cut(s) 1069
BstYI RGATCY 1 cut(s) 775
BstZI CGGCCG 1 cut(s) 1396
BsuI GTATCC 1 cut(s) 190
BsuRI GGCC 4 cut(s) 255, 322, 714, 1398
BtgI CCRYGG 1 cut(s) 1307
BtrI CACGTC 1 cut(s) 1034
BtsCI GGATG 4 cut(s) 528, 926, 936, 1230
Cac8I GCNNGC 4 cut(s) 449, 1143, 1362, 1400
CciI TCATGA 1 cut(s) 298
CfoI GCGC 1 cut(s) 365
Cfr10I RCCGGY 5 cut(s) 447, 641, 1321, 1394, 1398
Csp6I GTAC 4 cut(s) 180, 484, 1236, 1392
CspAI ACCGGT 2 cut(s) 641, 1321
CviAII CATG 4 cut(s) 299, 866, 1308, 1361
CviQI GTAC 4 cut(s) 180, 484, 1236, 1392
DdeI CTNAG 4 cut(s) 349, 587, 636, 668
DpnI GATC 8 cut(s) 18, 693, 777, 852, 898, 1100, 1191, 1209
DpnII GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
DraIII CACNNNGTG 1 cut(s) 383
EaeI YGGCCR 2 cut(s) 320, 1396
EagI CGGCCG 1 cut(s) 1396
Eam1104I CTCTTC 1 cut(s) 637
EarI CTCTTC 1 cut(s) 637
EclXI CGGCCG 1 cut(s) 1396
Eco130I CCWWGG 1 cut(s) 1307
Eco147I AGGCCT 1 cut(s) 714
Eco24I GRGCYC 1 cut(s) 674
Eco31I GGTCTC 1 cut(s) 632
Eco32I GATATC 2 cut(s) 43, 1168
Eco52I CGGCCG 1 cut(s) 1396
EcoRII CCWGG 4 cut(s) 453, 615, 709, 892
EcoRV GATATC 2 cut(s) 43, 1168
EcoT14I CCWWGG 1 cut(s) 1307
EcoT22I ATGCAT 1 cut(s) 1362
EcoT38I GRGCYC 1 cut(s) 674
ErhI CCWWGG 1 cut(s) 1307
Esp3I CGTCTC 1 cut(s) 963
FaeI CATG 4 cut(s) 302, 869, 1311, 1364
FalI AAGNNNNNCTT 2 cut(s) 1117, 1149
FaqI GGGAC 2 cut(s) 422, 1098
FatI CATG 4 cut(s) 298, 865, 1307, 1360
FauNDI CATATG 1 cut(s) 473
FbaI TGATCA 3 cut(s) 691, 850, 1098
Fnu4HI GCNGC 5 cut(s) 173, 256, 294, 361, 1365
FokI GGATG 4 cut(s) 515, 933, 943, 1217
FriOI GRGCYC 1 cut(s) 674
Fsp4HI GCNGC 5 cut(s) 173, 256, 294, 361, 1365
FspBI CTAG 4 cut(s) 519, 1178, 1329, 1416
FspI TGCGCA 1 cut(s) 364
GlaI GCGC 1 cut(s) 364
GluI GCNGC 5 cut(s) 173, 256, 294, 361, 1365
GsuI CTGGAG 2 cut(s) 100, 437
HaeIII GGCC 4 cut(s) 255, 322, 714, 1398
HapII CCGG 5 cut(s) 448, 642, 1322, 1395, 1399
HhaI GCGC 1 cut(s) 365
Hin1II CATG 4 cut(s) 302, 869, 1311, 1364
Hin6I GCGC 1 cut(s) 363
HinP1I GCGC 1 cut(s) 363
HincII GTYRAC 3 cut(s) 544, 703, 1024
HindII GTYRAC 3 cut(s) 544, 703, 1024
HinfI GANTC 1 cut(s) 1111
HpaI GTTAAC 1 cut(s) 703
HpaII CCGG 5 cut(s) 448, 642, 1322, 1395, 1399
HphI GGTGA 4 cut(s) 1022, 1093, 1202, 1291
Hpy166II GTNNAC 7 cut(s) 479, 544, 651, 703, 721, 1024, 1392
Hpy188I TCNGA 5 cut(s) 53, 637, 946, 1087, 1207
Hpy188III TCNNGA 4 cut(s) 23, 299, 968, 1178
Hpy8I GTNNAC 7 cut(s) 479, 544, 651, 703, 721, 1024, 1392
HpyAV CCTTC 3 cut(s) 56, 616, 1122
HpyCH4III ACNGT 3 cut(s) 483, 494, 1303
HpyCH4IV ACGT 2 cut(s) 1033, 1223
HpyCH4V TGCA 6 cut(s) 81, 399, 622, 934, 1227, 1360
HpyF10VI GCNNNNNNNGC 2 cut(s) 678, 1312
HpyF3I CTNAG 4 cut(s) 349, 587, 636, 668
HpySE526I ACGT 2 cut(s) 1033, 1223
Hsp92II CATG 4 cut(s) 302, 869, 1311, 1364
HspAI GCGC 1 cut(s) 363
KroI GCCGGC 2 cut(s) 447, 1398
KroNI GCCGGC 2 cut(s) 449, 1400
Ksp22I TGATCA 3 cut(s) 691, 850, 1098
KspAI GTTAAC 1 cut(s) 703
Kzo9I GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
LmnI GCTCC 3 cut(s) 456, 889, 1412
Lsp1109I GCAGC 3 cut(s) 159, 305, 347
LweI GCATC 1 cut(s) 921
MaeI CTAG 4 cut(s) 519, 1178, 1329, 1416
MaeII ACGT 2 cut(s) 1033, 1223
MaeIII GTNAC 3 cut(s) 521, 752, 1219
MalI GATC 8 cut(s) 18, 693, 777, 852, 898, 1100, 1191, 1209
MboI GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
MboII GAAGA 8 cut(s) 11, 181, 419, 518, 619, 624, 775, 1137
MfeI CAATTG 1 cut(s) 1378
MflI RGATCY 1 cut(s) 775
MhlI GDGCHC 1 cut(s) 674
MluCI AATT 8 cut(s) 216, 268, 308, 814, 1077, 1181, 1269, 1378
MlyI GAGTC 1 cut(s) 1120
MmeI TCCRAC 1 cut(s) 76
MnlI CCTC 9 cut(s) 284, 288, 441, 908, 911, 946, 1022, 1127, 1403
Mph1103I ATGCAT 1 cut(s) 1362
MroNI GCCGGC 2 cut(s) 447, 1398
MroXI GAANNNNTTC 1 cut(s) 1081
MseI TTAA 3 cut(s) 62, 537, 702
MslI CAYNNNNRTG 1 cut(s) 537
MspI CCGG 5 cut(s) 448, 642, 1322, 1395, 1399
MspR9I CCNGG 4 cut(s) 455, 617, 711, 894
MunI CAATTG 1 cut(s) 1378
MvaI CCWGG 4 cut(s) 455, 617, 711, 894
MwoI GCNNNNNNNGC 2 cut(s) 678, 1312
NaeI GCCGGC 2 cut(s) 449, 1400
NcoI CCATGG 1 cut(s) 1307
NdeI CATATG 1 cut(s) 473
NdeII GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
NgoMIV GCCGGC 2 cut(s) 447, 1398
NlaIII CATG 4 cut(s) 302, 869, 1311, 1364
NlaIV GGNNCC 5 cut(s) 452, 777, 891, 1305, 1326
NmeAIII GCCGAG 1 cut(s) 938
NmuCI GTSAC 1 cut(s) 752
NsbI TGCGCA 1 cut(s) 364
NsiI ATGCAT 1 cut(s) 1362
NspI RCATGY 1 cut(s) 1364
NspV TTCGAA 1 cut(s) 609
PaeI GCATGC 1 cut(s) 1364
PagI TCATGA 1 cut(s) 298
PceI AGGCCT 1 cut(s) 714
PdiI GCCGGC 2 cut(s) 449, 1400
PdmI GAANNNNTTC 1 cut(s) 1081
PflFI GACNNNGTC 1 cut(s) 861
PflMI CCANNNNNTGG 2 cut(s) 99, 417
PinAI ACCGGT 2 cut(s) 641, 1321
PkrI GCNGC 5 cut(s) 174, 257, 295, 362, 1366
PleI GAGTC 1 cut(s) 1119
PpsI GAGTC 1 cut(s) 1119
Ppu21I YACGTR 1 cut(s) 1224
Psp6I CCWGG 4 cut(s) 453, 615, 709, 892
PspGI CCWGG 4 cut(s) 453, 615, 709, 892
PspN4I GGNNCC 5 cut(s) 452, 777, 891, 1305, 1326
PsuI RGATCY 1 cut(s) 775
PsyI GACNNNGTC 1 cut(s) 861
RsaI GTAC 4 cut(s) 181, 485, 1237, 1393
RsaNI GTAC 4 cut(s) 180, 484, 1236, 1392
RseI CAYNNNNRTG 1 cut(s) 537
SaqAI TTAA 3 cut(s) 62, 537, 702
SatI GCNGC 5 cut(s) 173, 256, 294, 361, 1365
Sau3AI GATC 8 cut(s) 16, 691, 775, 850, 896, 1098, 1189, 1207
ScaI AGTACT 1 cut(s) 181
SchI GAGTC 1 cut(s) 1120
ScrFI CCNGG 4 cut(s) 455, 617, 711, 894
SduI GDGCHC 1 cut(s) 674
SfaNI GCATC 1 cut(s) 921
SfcI CTRYAG 1 cut(s) 547
SfuI TTCGAA 1 cut(s) 609
SmiMI CAYNNNNRTG 1 cut(s) 537
SmlI CTYRAG 1 cut(s) 1247
SmoI CTYRAG 1 cut(s) 1247
SpeI ACTAGT 1 cut(s) 518
SphI GCATGC 1 cut(s) 1364
Sse9I AATT 8 cut(s) 216, 268, 308, 814, 1077, 1181, 1269, 1378
SseBI AGGCCT 1 cut(s) 714
SsiI CCGC 3 cut(s) 256, 928, 1365
SspI AATATT 2 cut(s) 808, 835
SspMI CTAG 4 cut(s) 519, 1178, 1329, 1416
StuI AGGCCT 1 cut(s) 714
StyD4I CCNGG 4 cut(s) 453, 615, 709, 892
StyI CCWWGG 1 cut(s) 1307
TaaI ACNGT 3 cut(s) 483, 494, 1303
TaiI ACGT 2 cut(s) 1036, 1226
TaqI TCGA 3 cut(s) 609, 967, 1149
TasI AATT 8 cut(s) 216, 268, 308, 814, 1077, 1181, 1269, 1378
TatI WGTACW 1 cut(s) 179
TauI GCSGC 2 cut(s) 258, 1367
Tru1I TTAA 3 cut(s) 62, 537, 702
Tru9I TTAA 3 cut(s) 62, 537, 702
TseFI GTSAC 1 cut(s) 752
TseI GCWGC 3 cut(s) 172, 293, 360
Tsp45I GTSAC 1 cut(s) 752
TspDTI ATGAA 4 cut(s) 315, 460, 1013, 1212
TspGWI ACGGA 2 cut(s) 1041, 1223
Tth111I GACNNNGTC 1 cut(s) 861
Van91I CCANNNNNTGG 2 cut(s) 99, 417
XapI RAATTY 1 cut(s) 216
XbaI TCTAGA 1 cut(s) 1177
XceI RCATGY 1 cut(s) 1364
XcmI CCANNNNNNNNNTGG 1 cut(s) 461
XmnI GAANNNNTTC 1 cut(s) 1081
XspI CTAG 4 cut(s) 519, 1178, 1329, 1416
ZrmI AGTACT 1 cut(s) 181
Zsp2I ATGCAT 1 cut(s) 1362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.