Rw6G044530

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0000270
Physical Location & Seq
Reverse (-)
67632082 .. 67633498
1417 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G044530.1

Sequence Viewer

Length: 1356 bp
ATGATGGATACAAATACGCTAAAAAGATTGAAATCATCATCACCAGGAGAAGCAGAGTTATTGAGAACTAATATTGATGATCTCCCGGAGGTTTTATTGGTTGAAATTCTGTGTCGGCTTCCCTGCAATAAATTCATATTCCAGTGCAAGCTTGTGTCCAAACCTTGGTACAATCTCATATCTGCTCCTTCCTTTGTTGGCCGATATCTATGCCTCCAACGTCAAATGCAAAACCCTGTCCTTACAACTCTAATTCTATTCGATATGACCGACCCAATATCTCTCATCATAACGTCGGATCATCCGGTCTTCAAAACAGCTGCAAGCGATTTCACTCTTAATTTCCTCCCATGTTATCACCAAGTCAAACAAATAGAAGAACTAGCAAAAGAATACCCCTGGAGCAACTATATGAGCTGGATGTTCGAACCAGGTATCGTTGTACCACCAGTTGTGATAGGGACTTATAATGACTTGGTTTTATGCTGCGTAACCAAGCATTATCAGCGTCATTACTACCTCTGCAATCCATACACCAGACAATGGGTTCCTCTTCCTCCCACCCCTGGGGTCTACCACCGCTCGCTTGTGGCCTTTGACTGTGATCCATTTACTACTAGTAGAACGAATTCTTTCATCCTTAATGCTGAGTATAAGTGGAAGGTTGTGCGACTAGTACCGAATTCATCAGATCCAAACTTTCATTTCGAGATCTTCTCTTCTGAGACCCGTCAATGGAGAGAGATAGTTGTAGTATGCTCTCGGCCATTTTCTTCATTTTTTAGTGATGTATTCTTTCTCATTGGGAAAACTACATCTTCCGTAGCTTACAATGGAATGTTGTACTTGTGGTGCCATAATGACCTTATACTTGAGTTGGATCTGTCCAAATCCAATACTGTTAAGTACCGTTGCATTGAGCAGCCTGAGGATTTTTCAAATGGAGGAGGGGGAAGAGGGTGGCTAGGAGTGAGCGGAGGGCGTCTGCTGTTATGCATGGATACAGAATTTCTCCCTAGAGATCACGATGAGGTTCTGCTGCCATTTAGAGTAAGGGAGTTGAAACAAGTAGTCAAGGGCAGCCAAGGCAAACTCAAATGGTTAGCCGACCGTGTTACTATAGCTTGCAAAGATATTGAGGTCCCCAATCCAAACACGATTAGCGTGCTCGCCTTCCACCCAAACAATGAGGATGTCGTGTGTTTGAGTCTATACCGTAAAATTATCGCGTGCAACCTTCGTGGAGGAACGTTAGAGACAACTACAGAGAGTAAAATAAAGGGAGTCGAGAAGAACTTGTACTATCCGTTTTCTCTTCCATGGTGGCCTACCCCAGTTCCTAAGACTCTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

451

Amino Acids

51.82

Weight (kDa)

7.46

Isoelectric Point (pI)

45.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 25 - 65 4.1e-06 F-box domain
b-prop_At3g26010-like PF24750 152 - 423 1.5e-11 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 468
AccB1I GGYRCC 1 cut(s) 852
AccB7I CCANNNNNTGG 2 cut(s) 165, 543
AccBSI CCGCTC 2 cut(s) 582, 975
AccI GTMKAC 1 cut(s) 573
AccII CGCG 1 cut(s) 1229
AciI CCGC 2 cut(s) 580, 975
AclI AACGTT 1 cut(s) 1250
AclWI GGATC 4 cut(s) 306, 599, 686, 888
AcoI YGGCCR 2 cut(s) 199, 764
AcsI RAATTY 5 cut(s) 105, 131, 628, 682, 1007
AcyI GRCGYC 1 cut(s) 982
AfaI GTAC 6 cut(s) 170, 444, 678, 845, 908, 1301
AfiI CCNNNNNNNGG 5 cut(s) 165, 543, 566, 567, 735
AgsI TTSAA 5 cut(s) 31, 104, 313, 939, 1063
AhlI ACTAGT 2 cut(s) 617, 673
AjnI CCWGG 4 cut(s) 43, 398, 430, 565
AluBI AGCT 5 cut(s) 151, 320, 417, 827, 1124
AluI AGCT 5 cut(s) 151, 320, 417, 827, 1124
Alw21I GWGCWC 1 cut(s) 1170
Alw26I GTCTC 2 cut(s) 719, 1250
AlwI GGATC 4 cut(s) 306, 599, 686, 888
AoxI GGCC 4 cut(s) 199, 591, 764, 1325
ApeKI GCWGC 5 cut(s) 320, 486, 922, 1039, 1080
ApoI RAATTY 5 cut(s) 105, 131, 628, 682, 1007
Asp700I GAANNNNTTC 2 cut(s) 628, 632
AspS9I GGNCC 1 cut(s) 1141
AsuC2I CCSGG 1 cut(s) 86
AsuHPI GGTGA 2 cut(s) 33, 350
AsuII TTCGAA 1 cut(s) 426
AvaII GGWCC 1 cut(s) 1141
AxyI CCTNAGG 1 cut(s) 927
BanI GGYRCC 1 cut(s) 852
BarI GAAGNNNNNNTAC 2 cut(s) 1283, 1315
BbsI GAAGAC 1 cut(s) 301
Bbv12I GWGCWC 1 cut(s) 1170
BbvI GCAGC 5 cut(s) 307, 473, 934, 1026, 1092
BcgI CGANNNNNNTGC 4 cut(s) 192, 226, 1147, 1181
BciT130I CCWGG 4 cut(s) 45, 400, 432, 567
BciVI GTATCC 1 cut(s) 994
BcnI CCSGG 1 cut(s) 86
BcoDI GTCTC 2 cut(s) 719, 1250
BcuI ACTAGT 2 cut(s) 617, 673
BfaI CTAG 6 cut(s) 383, 618, 674, 965, 1017, 1349
BfmI CTRYAG 2 cut(s) 1119, 1263
BfuI GTATCC 1 cut(s) 994
BglII AGATCT 1 cut(s) 711
BisI GCNGC 5 cut(s) 321, 487, 923, 1040, 1081
BlsI GCNGC 5 cut(s) 322, 488, 924, 1041, 1082
Bme1390I CCNGG 5 cut(s) 45, 86, 400, 432, 567
Bme18I GGWCC 1 cut(s) 1141
BmgT120I GGNCC 1 cut(s) 1141
BmiI GGNNCC 3 cut(s) 549, 854, 1143
BmrFI CCNGG 5 cut(s) 45, 86, 400, 432, 567
BmrI ACTGGG 1 cut(s) 1328
BmuI ACTGGG 1 cut(s) 1328
BpiI GAAGAC 1 cut(s) 301
BplI GAGNNNNNCTC 2 cut(s) 701, 733
BpmI CTGGAG 1 cut(s) 421
Bpu14I TTCGAA 1 cut(s) 426
BpuEI CTTGAG 1 cut(s) 893
BpuMI CCSGG 1 cut(s) 86
BsaBI GATNNNNATC 1 cut(s) 31
BsaHI GRCGYC 1 cut(s) 982
BsaI GGTCTC 1 cut(s) 719
BsaJI CCNNGG 6 cut(s) 164, 398, 565, 566, 1084, 1319
BsaWI WCCGGW 1 cut(s) 304
Bsc4I CCNNNNNNNGG 5 cut(s) 165, 543, 566, 567, 735
Bse1I ACTGG 3 cut(s) 142, 449, 1334
Bse21I CCTNAGG 1 cut(s) 927
Bse8I GATNNNNATC 1 cut(s) 31
BseBI CCWGG 4 cut(s) 45, 400, 432, 567
BseDI CCNNGG 6 cut(s) 164, 398, 565, 566, 1084, 1319
BseGI GGATG 4 cut(s) 301, 426, 636, 1198
BseJI GATNNNNATC 1 cut(s) 31
BseLI CCNNNNNNNGG 5 cut(s) 165, 543, 566, 567, 735
BseMII CTCAG 3 cut(s) 639, 714, 918
BseNI ACTGG 3 cut(s) 142, 449, 1334
BseRI GAGGAG 1 cut(s) 960
BseXI GCAGC 5 cut(s) 307, 473, 934, 1026, 1092
Bsh1236I CGCG 1 cut(s) 1229
Bsh1285I CGRYCG 1 cut(s) 1111
BshFI GGCC 4 cut(s) 201, 593, 766, 1327
BshNI GGYRCC 1 cut(s) 852
BsiEI CGRYCG 1 cut(s) 1111
BsiHKAI GWGCWC 1 cut(s) 1170
BsiSI CCGG 2 cut(s) 86, 305
BslFI GGGAC 2 cut(s) 475, 1127
BslI CCNNNNNNNGG 5 cut(s) 165, 543, 566, 567, 735
BsmAI GTCTC 2 cut(s) 719, 1250
BsmFI GGGAC 2 cut(s) 475, 1127
BsnI GGCC 4 cut(s) 201, 593, 766, 1327
Bso31I GGTCTC 1 cut(s) 719
Bsp119I TTCGAA 1 cut(s) 426
Bsp1286I GDGCHC 1 cut(s) 1170
Bsp143I GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
Bsp19I CCATGG 1 cut(s) 1319
BspACI CCGC 2 cut(s) 580, 975
BspANI GGCC 4 cut(s) 201, 593, 766, 1327
BspCNI CTCAG 3 cut(s) 640, 715, 919
BspFNI CGCG 1 cut(s) 1229
BspLI GGNNCC 3 cut(s) 549, 854, 1143
BspPI GGATC 4 cut(s) 306, 599, 686, 888
BspT104I TTCGAA 1 cut(s) 426
BspT107I GGYRCC 1 cut(s) 852
BspTNI GGTCTC 1 cut(s) 719
BsrBI CCGCTC 2 cut(s) 582, 975
BsrI ACTGG 3 cut(s) 142, 449, 1334
BssECI CCNNGG 6 cut(s) 164, 398, 565, 566, 1084, 1319
BssMI GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
BssNI GRCGYC 1 cut(s) 982
BssT1I CCWWGG 3 cut(s) 164, 1084, 1319
Bst2UI CCWGG 4 cut(s) 45, 400, 432, 567
Bst4CI ACNGT 5 cut(s) 602, 901, 911, 1112, 1217
Bst6I CTCTTC 4 cut(s) 558, 724, 949, 1320
BstACI GRCGYC 1 cut(s) 982
BstBI TTCGAA 1 cut(s) 426
BstC8I GCNNGC 7 cut(s) 149, 325, 584, 1126, 1166, 1170, 1231
BstDEI CTNAG 4 cut(s) 648, 723, 927, 1341
BstDSI CCRYGG 1 cut(s) 1319
BstF5I GGATG 4 cut(s) 301, 426, 636, 1198
BstFNI CGCG 1 cut(s) 1229
BstKTI GATC 7 cut(s) 82, 301, 607, 694, 714, 883, 1024
BstMAI GTCTC 2 cut(s) 719, 1250
BstMBI GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
BstMCI CGRYCG 1 cut(s) 1111
BstMWI GCNNNNNNNGC 2 cut(s) 505, 1086
BstNI CCWGG 4 cut(s) 45, 400, 432, 567
BstSCI CCNGG 5 cut(s) 43, 84, 398, 430, 565
BstSFI CTRYAG 2 cut(s) 1119, 1263
BstUI CGCG 1 cut(s) 1229
BstV1I GCAGC 5 cut(s) 307, 473, 934, 1026, 1092
BstV2I GAAGAC 1 cut(s) 301
BstX2I RGATCY 3 cut(s) 691, 711, 880
BstYI RGATCY 3 cut(s) 691, 711, 880
Bsu36I CCTNAGG 1 cut(s) 927
BsuI GTATCC 1 cut(s) 994
BsuRI GGCC 4 cut(s) 201, 593, 766, 1327
BtgI CCRYGG 1 cut(s) 1319
BtsCI GGATG 4 cut(s) 301, 426, 636, 1198
BtsIMutI CAGTG 1 cut(s) 149
Cac8I GCNNGC 7 cut(s) 149, 325, 584, 1126, 1166, 1170, 1231
Cfr13I GGNCC 1 cut(s) 1141
CseI GACGC 2 cut(s) 497, 971
CsiI ACCWGGT 1 cut(s) 430
Csp6I GTAC 6 cut(s) 169, 443, 677, 844, 907, 1300
CspCI CAANNNNNGTGG 2 cut(s) 1222, 1257
CviAII CATG 3 cut(s) 351, 997, 1320
CviQI GTAC 6 cut(s) 169, 443, 677, 844, 907, 1300
DdeI CTNAG 4 cut(s) 648, 723, 927, 1341
DpnI GATC 7 cut(s) 81, 300, 606, 693, 713, 882, 1023
DpnII GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
EaeI YGGCCR 2 cut(s) 199, 764
Eam1104I CTCTTC 4 cut(s) 558, 724, 949, 1320
EarI CTCTTC 4 cut(s) 558, 724, 949, 1320
Eco130I CCWWGG 3 cut(s) 164, 1084, 1319
Eco31I GGTCTC 1 cut(s) 719
Eco32I GATATC 1 cut(s) 206
Eco47I GGWCC 1 cut(s) 1141
Eco81I CCTNAGG 1 cut(s) 927
EcoO109I RGGNCCY 1 cut(s) 1141
EcoRI GAATTC 2 cut(s) 628, 682
EcoRII CCWGG 4 cut(s) 43, 398, 430, 565
EcoRV GATATC 1 cut(s) 206
EcoT14I CCWWGG 3 cut(s) 164, 1084, 1319
EcoT22I ATGCAT 1 cut(s) 998
ErhI CCWWGG 3 cut(s) 164, 1084, 1319
FaeI CATG 3 cut(s) 354, 1000, 1323
FaqI GGGAC 2 cut(s) 475, 1127
FatI CATG 3 cut(s) 350, 996, 1319
FblI GTMKAC 1 cut(s) 573
Fnu4HI GCNGC 5 cut(s) 321, 487, 923, 1040, 1081
FokI GGATG 4 cut(s) 288, 433, 623, 1205
Fsp4HI GCNGC 5 cut(s) 321, 487, 923, 1040, 1081
FspBI CTAG 6 cut(s) 383, 618, 674, 965, 1017, 1349
GluI GCNGC 5 cut(s) 321, 487, 923, 1040, 1081
GsuI CTGGAG 1 cut(s) 421
HaeIII GGCC 4 cut(s) 201, 593, 766, 1327
HapII CCGG 2 cut(s) 86, 305
HgaI GACGC 2 cut(s) 497, 971
Hin1I GRCGYC 1 cut(s) 982
Hin1II CATG 3 cut(s) 354, 1000, 1323
HindIII AAGCTT 1 cut(s) 149
HinfI GANTC 3 cut(s) 1207, 1284, 1345
HpaII CCGG 2 cut(s) 86, 305
HphI GGTGA 2 cut(s) 33, 350
Hpy166II GTNNAC 1 cut(s) 574
Hpy188I TCNGA 3 cut(s) 298, 691, 724
Hpy188III TCNNGA 4 cut(s) 709, 1025, 1288, 1349
Hpy8I GTNNAC 1 cut(s) 574
Hpy99I CGWCG 1 cut(s) 298
HpyAV CCTTC 4 cut(s) 198, 655, 1183, 1247
HpyCH4III ACNGT 5 cut(s) 602, 901, 911, 1112, 1217
HpyCH4IV ACGT 3 cut(s) 220, 293, 1250
HpyCH4V TGCA 9 cut(s) 126, 147, 229, 323, 525, 915, 996, 1128, 1233
HpyF10VI GCNNNNNNNGC 2 cut(s) 505, 1086
HpyF3I CTNAG 4 cut(s) 648, 723, 927, 1341
HpySE526I ACGT 3 cut(s) 220, 293, 1250
Hsp92I GRCGYC 1 cut(s) 982
Hsp92II CATG 3 cut(s) 354, 1000, 1323
Kzo9I GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
LmnI GCTCC 2 cut(s) 190, 402
Lsp1109I GCAGC 5 cut(s) 307, 473, 934, 1026, 1092
MabI ACCWGGT 1 cut(s) 430
MaeI CTAG 6 cut(s) 383, 618, 674, 965, 1017, 1349
MaeII ACGT 3 cut(s) 220, 293, 1250
MaeIII GTNAC 2 cut(s) 490, 1114
MalI GATC 7 cut(s) 81, 300, 606, 693, 713, 882, 1023
MbiI CCGCTC 2 cut(s) 582, 975
MboI GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
MflI RGATCY 3 cut(s) 691, 711, 880
MhlI GDGCHC 1 cut(s) 1170
MluCI AATT 8 cut(s) 105, 131, 252, 340, 628, 682, 1007, 1221
MlyI GAGTC 3 cut(s) 1216, 1293, 1339
MmeI TCCRAC 3 cut(s) 241, 276, 858
Mph1103I ATGCAT 1 cut(s) 998
MroXI GAANNNNTTC 2 cut(s) 628, 632
MseI TTAA 3 cut(s) 339, 642, 903
MspA1I CMGCKG 1 cut(s) 320
MspI CCGG 2 cut(s) 86, 305
MspR9I CCNGG 5 cut(s) 45, 86, 400, 432, 567
MvaI CCWGG 4 cut(s) 45, 400, 432, 567
MvnI CGCG 1 cut(s) 1229
MwoI GCNNNNNNNGC 2 cut(s) 505, 1086
NciI CCSGG 1 cut(s) 86
NcoI CCATGG 1 cut(s) 1319
NdeII GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
NlaIII CATG 3 cut(s) 354, 1000, 1323
NlaIV GGNNCC 3 cut(s) 549, 854, 1143
NmeAIII GCCGAG 1 cut(s) 742
NsiI ATGCAT 1 cut(s) 998
NspV TTCGAA 1 cut(s) 426
PasI CCCWGGG 1 cut(s) 566
PcsI WCGNNNNNNNCGW 1 cut(s) 267
PdmI GAANNNNTTC 2 cut(s) 628, 632
PflMI CCANNNNNTGG 2 cut(s) 165, 543
PfoI TCCNGGA 1 cut(s) 84
PkrI GCNGC 5 cut(s) 322, 488, 924, 1041, 1082
PleI GAGTC 3 cut(s) 1215, 1292, 1339
PpsI GAGTC 3 cut(s) 1215, 1292, 1339
PpuMI RGGWCCY 1 cut(s) 1141
PsiI TTATAA 1 cut(s) 468
Psp1406I AACGTT 1 cut(s) 1250
Psp5II RGGWCCY 1 cut(s) 1141
Psp6I CCWGG 4 cut(s) 43, 398, 430, 565
PspGI CCWGG 4 cut(s) 43, 398, 430, 565
PspN4I GGNNCC 3 cut(s) 549, 854, 1143
PspPI GGNCC 1 cut(s) 1141
PspPPI RGGWCCY 1 cut(s) 1141
PsuI RGATCY 3 cut(s) 691, 711, 880
PvuII CAGCTG 1 cut(s) 320
RsaI GTAC 6 cut(s) 170, 444, 678, 845, 908, 1301
RsaNI GTAC 6 cut(s) 169, 443, 677, 844, 907, 1300
SaqAI TTAA 3 cut(s) 339, 642, 903
SatI GCNGC 5 cut(s) 321, 487, 923, 1040, 1081
Sau3AI GATC 7 cut(s) 79, 298, 604, 691, 711, 880, 1021
Sau96I GGNCC 1 cut(s) 1141
SchI GAGTC 3 cut(s) 1216, 1293, 1339
ScrFI CCNGG 5 cut(s) 45, 86, 400, 432, 567
SduI GDGCHC 1 cut(s) 1170
SexAI ACCWGGT 1 cut(s) 430
SfcI CTRYAG 2 cut(s) 1119, 1263
SfuI TTCGAA 1 cut(s) 426
SinI GGWCC 1 cut(s) 1141
SmlI CTYRAG 1 cut(s) 872
SmoI CTYRAG 1 cut(s) 872
SpeI ACTAGT 2 cut(s) 617, 673
Sse9I AATT 8 cut(s) 105, 131, 252, 340, 628, 682, 1007, 1221
SsiI CCGC 2 cut(s) 580, 975
SspI AATATT 1 cut(s) 73
SspMI CTAG 6 cut(s) 383, 618, 674, 965, 1017, 1349
StyD4I CCNGG 5 cut(s) 43, 84, 398, 430, 565
StyI CCWWGG 3 cut(s) 164, 1084, 1319
TaaI ACNGT 5 cut(s) 602, 901, 911, 1112, 1217
TaiI ACGT 3 cut(s) 223, 296, 1253
TaqI TCGA 4 cut(s) 261, 426, 708, 1287
TaqII GACCGA 1 cut(s) 284
TasI AATT 8 cut(s) 105, 131, 252, 340, 628, 682, 1007, 1221
TatI WGTACW 2 cut(s) 843, 1299
Tru1I TTAA 3 cut(s) 339, 642, 903
Tru9I TTAA 3 cut(s) 339, 642, 903
TscAI CASTG 1 cut(s) 149
TseI GCWGC 5 cut(s) 320, 486, 922, 1039, 1080
TspDTI ATGAA 5 cut(s) 124, 625, 675, 692, 765
TspGWI ACGGA 2 cut(s) 811, 1296
TspRI CASTG 1 cut(s) 149
Van91I CCANNNNNTGG 2 cut(s) 165, 543
VpaK11BI GGWCC 1 cut(s) 1141
XapI RAATTY 5 cut(s) 105, 131, 628, 682, 1007
XbaI TCTAGA 1 cut(s) 1348
XmiI GTMKAC 1 cut(s) 573
XmnI GAANNNNTTC 2 cut(s) 628, 632
XspI CTAG 6 cut(s) 383, 618, 674, 965, 1017, 1349
Zsp2I ATGCAT 1 cut(s) 998
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.