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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 12, 696 |
| Acc16I | TGCGCA | 2 cut(s) | 157, 841 |
| AccII | CGCG | 1 cut(s) | 668 |
| AciI | CCGC | 3 cut(s) | 594, 1278, 1369 |
| AclWI | GGATC | 6 cut(s) | 566, 579, 1250, 1263, 1484, 1628 |
| AcsI | RAATTY | 2 cut(s) | 1423, 1571 |
| AcuI | CTGAAG | 1 cut(s) | 1800 |
| AfaI | GTAC | 9 cut(s) | 30, 255, 542, 589, 714, 939, 1226, 1273, 1376 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 13, 357, 407, 697, 1041, 1091, 1783 |
| AgsI | TTSAA | 9 cut(s) | 92, 250, 580, 776, 934, 1264, 1570, 1652, 1792 |
| AjiI | CACGTC | 1 cut(s) | 1528 |
| AjnI | CCWGG | 4 cut(s) | 161, 508, 845, 1192 |
| AluBI | AGCT | 6 cut(s) | 60, 330, 343, 744, 1027, 1824 |
| AluI | AGCT | 6 cut(s) | 60, 330, 343, 744, 1027, 1824 |
| Alw26I | GTCTC | 2 cut(s) | 431, 1115 |
| AlwI | GGATC | 6 cut(s) | 566, 579, 1250, 1263, 1484, 1628 |
| AoxI | GGCC | 5 cut(s) | 144, 506, 828, 1190, 1736 |
| ApeKI | GCWGC | 3 cut(s) | 153, 327, 837 |
| ApoI | RAATTY | 2 cut(s) | 1423, 1571 |
| AspLEI | GCGC | 3 cut(s) | 158, 842, 1776 |
| AspS9I | GGNCC | 2 cut(s) | 4, 688 |
| AsuC2I | CCSGG | 2 cut(s) | 352, 373 |
| AsuHPI | GGTGA | 2 cut(s) | 455, 1139 |
| AvaII | GGWCC | 2 cut(s) | 4, 688 |
| BamHI | GGATCC | 2 cut(s) | 571, 1255 |
| BauI | CACGAG | 1 cut(s) | 606 |
| BbsI | GAAGAC | 2 cut(s) | 36, 720 |
| BbvI | GCAGC | 3 cut(s) | 140, 339, 824 |
| BccI | CCATC | 2 cut(s) | 341, 1350 |
| BciT130I | CCWGG | 4 cut(s) | 163, 510, 847, 1194 |
| BciVI | GTATCC | 1 cut(s) | 369 |
| BclI | TGATCA | 2 cut(s) | 286, 970 |
| BcnI | CCSGG | 2 cut(s) | 352, 373 |
| BcoDI | GTCTC | 2 cut(s) | 431, 1115 |
| BfaI | CTAG | 5 cut(s) | 591, 1275, 1346, 1532, 1752 |
| BfmI | CTRYAG | 1 cut(s) | 1039 |
| BfoI | RGCGCY | 1 cut(s) | 1777 |
| BfuI | GTATCC | 1 cut(s) | 369 |
| BglII | AGATCT | 2 cut(s) | 423, 1107 |
| BisI | GCNGC | 3 cut(s) | 154, 328, 838 |
| BlsI | GCNGC | 3 cut(s) | 155, 329, 839 |
| BmcAI | AGTACT | 2 cut(s) | 589, 1273 |
| Bme1390I | CCNGG | 6 cut(s) | 163, 352, 373, 510, 847, 1194 |
| Bme18I | GGWCC | 2 cut(s) | 4, 688 |
| BmgBI | CACGTC | 1 cut(s) | 1528 |
| BmgT120I | GGNCC | 2 cut(s) | 4, 688 |
| BmiI | GGNNCC | 4 cut(s) | 6, 573, 690, 1257 |
| BmrFI | CCNGG | 6 cut(s) | 163, 352, 373, 510, 847, 1194 |
| BmrI | ACTGGG | 2 cut(s) | 416, 1100 |
| BmuI | ACTGGG | 2 cut(s) | 416, 1100 |
| BoxI | GACNNNNGTC | 2 cut(s) | 624, 1308 |
| BpiI | GAAGAC | 2 cut(s) | 36, 720 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 413, 445 |
| BpuEI | CTTGAG | 2 cut(s) | 219, 903 |
| BpuMI | CCSGG | 2 cut(s) | 352, 373 |
| BsaJI | CCNNGG | 2 cut(s) | 1357, 1730 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1130, 1160 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 13, 357, 407, 697, 1041, 1091, 1783 |
| Bse118I | RCCGGY | 2 cut(s) | 314, 1034 |
| Bse1I | ACTGG | 6 cut(s) | 257, 411, 941, 1095, 1628, 1745 |
| Bse3DI | GCAATG | 6 cut(s) | 215, 495, 899, 1179, 1555, 1675 |
| BseBI | CCWGG | 4 cut(s) | 163, 510, 847, 1194 |
| BseDI | CCNNGG | 2 cut(s) | 1357, 1730 |
| BseGI | GGATG | 3 cut(s) | 1081, 1377, 1561 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 13, 357, 407, 697, 1041, 1091, 1783 |
| BseMI | GCAATG | 6 cut(s) | 215, 495, 899, 1179, 1555, 1675 |
| BseMII | CTCAG | 2 cut(s) | 426, 1110 |
| BseNI | ACTGG | 6 cut(s) | 257, 411, 941, 1095, 1628, 1745 |
| BseXI | GCAGC | 3 cut(s) | 140, 339, 824 |
| BsgI | GTGCAG | 3 cut(s) | 382, 1066, 1124 |
| Bsh1236I | CGCG | 1 cut(s) | 668 |
| BshFI | GGCC | 5 cut(s) | 146, 508, 830, 1192, 1738 |
| BsiSI | CCGG | 4 cut(s) | 315, 351, 373, 1035 |
| BslFI | GGGAC | 3 cut(s) | 215, 674, 899 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 13, 357, 407, 697, 1041, 1091, 1783 |
| BsmAI | GTCTC | 2 cut(s) | 431, 1115 |
| BsmFI | GGGAC | 3 cut(s) | 215, 674, 899 |
| BsnI | GGCC | 5 cut(s) | 146, 508, 830, 1192, 1738 |
| Bsp19I | CCATGG | 1 cut(s) | 1730 |
| Bsp68I | TCGCGA | 1 cut(s) | 668 |
| BspACI | CCGC | 3 cut(s) | 594, 1278, 1369 |
| BspANI | GGCC | 5 cut(s) | 146, 508, 830, 1192, 1738 |
| BspCNI | CTCAG | 2 cut(s) | 427, 1111 |
| BspFNI | CGCG | 1 cut(s) | 668 |
| BspHI | TCATGA | 2 cut(s) | 336, 1020 |
| BspLI | GGNNCC | 4 cut(s) | 6, 573, 690, 1257 |
| BspPI | GGATC | 6 cut(s) | 566, 579, 1250, 1263, 1484, 1628 |
| BspQI | GCTCTTC | 3 cut(s) | 225, 909, 978 |
| BsrDI | GCAATG | 6 cut(s) | 215, 495, 899, 1179, 1555, 1675 |
| BsrFI | RCCGGY | 2 cut(s) | 314, 1034 |
| BsrI | ACTGG | 6 cut(s) | 257, 411, 941, 1095, 1628, 1745 |
| BssAI | RCCGGY | 2 cut(s) | 314, 1034 |
| BssECI | CCNNGG | 2 cut(s) | 1357, 1730 |
| BssSI | CACGAG | 1 cut(s) | 606 |
| BssT1I | CCWWGG | 2 cut(s) | 1357, 1730 |
| Bst2BI | CACGAG | 1 cut(s) | 606 |
| Bst2UI | CCWGG | 4 cut(s) | 163, 510, 847, 1194 |
| Bst4CI | ACNGT | 5 cut(s) | 284, 551, 968, 1235, 1797 |
| Bst6I | CTCTTC | 8 cut(s) | 225, 289, 436, 909, 973, 978, 1120, 1616 |
| BstC8I | GCNNGC | 2 cut(s) | 520, 1204 |
| BstDEI | CTNAG | 5 cut(s) | 204, 435, 888, 1119, 1494 |
| BstDSI | CCRYGG | 1 cut(s) | 1730 |
| BstF5I | GGATG | 3 cut(s) | 1081, 1377, 1561 |
| BstFNI | CGCG | 1 cut(s) | 668 |
| BstH2I | RGCGCY | 1 cut(s) | 1777 |
| BstHHI | GCGC | 3 cut(s) | 158, 842, 1776 |
| BstMAI | GTCTC | 2 cut(s) | 431, 1115 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 519, 649, 1044, 1203, 1602 |
| BstNI | CCWGG | 4 cut(s) | 163, 510, 847, 1194 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 624, 1308 |
| BstSCI | CCNGG | 6 cut(s) | 161, 350, 371, 508, 845, 1192 |
| BstSFI | CTRYAG | 1 cut(s) | 1039 |
| BstUI | CGCG | 1 cut(s) | 668 |
| BstV1I | GCAGC | 3 cut(s) | 140, 339, 824 |
| BstV2I | GAAGAC | 2 cut(s) | 36, 720 |
| BstX2I | RGATCY | 5 cut(s) | 423, 571, 1107, 1255, 1489 |
| BstYI | RGATCY | 5 cut(s) | 423, 571, 1107, 1255, 1489 |
| BsuI | GTATCC | 1 cut(s) | 369 |
| BsuRI | GGCC | 5 cut(s) | 146, 508, 830, 1192, 1738 |
| BtgI | CCRYGG | 1 cut(s) | 1730 |
| BtrI | CACGTC | 1 cut(s) | 1528 |
| BtsCI | GGATG | 3 cut(s) | 1081, 1377, 1561 |
| BtsIMutI | CAGTG | 2 cut(s) | 264, 948 |
| BtuMI | TCGCGA | 1 cut(s) | 668 |
| Cac8I | GCNNGC | 2 cut(s) | 520, 1204 |
| CciI | TCATGA | 2 cut(s) | 336, 1020 |
| CfoI | GCGC | 3 cut(s) | 158, 842, 1776 |
| Cfr10I | RCCGGY | 2 cut(s) | 314, 1034 |
| Cfr13I | GGNCC | 2 cut(s) | 4, 688 |
| Csp6I | GTAC | 9 cut(s) | 29, 254, 541, 588, 713, 938, 1225, 1272, 1375 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 532, 567, 1216, 1251 |
| CviAII | CATG | 6 cut(s) | 290, 337, 974, 1021, 1591, 1731 |
| CviQI | GTAC | 9 cut(s) | 29, 254, 541, 588, 713, 938, 1225, 1272, 1375 |
| DdeI | CTNAG | 5 cut(s) | 204, 435, 888, 1119, 1494 |
| Eam1104I | CTCTTC | 8 cut(s) | 225, 289, 436, 909, 973, 978, 1120, 1616 |
| EarI | CTCTTC | 8 cut(s) | 225, 289, 436, 909, 973, 978, 1120, 1616 |
| Eco130I | CCWWGG | 2 cut(s) | 1357, 1730 |
| Eco147I | AGGCCT | 2 cut(s) | 508, 1192 |
| Eco47I | GGWCC | 2 cut(s) | 4, 688 |
| Eco57I | CTGAAG | 1 cut(s) | 1800 |
| EcoRII | CCWGG | 4 cut(s) | 161, 508, 845, 1192 |
| EcoT14I | CCWWGG | 2 cut(s) | 1357, 1730 |
| ErhI | CCWWGG | 2 cut(s) | 1357, 1730 |
| FaeI | CATG | 6 cut(s) | 293, 340, 977, 1024, 1594, 1734 |
| FaqI | GGGAC | 3 cut(s) | 215, 674, 899 |
| FatI | CATG | 6 cut(s) | 289, 336, 973, 1020, 1590, 1730 |
| FauNDI | CATATG | 1 cut(s) | 1720 |
| FbaI | TGATCA | 2 cut(s) | 286, 970 |
| Fnu4HI | GCNGC | 3 cut(s) | 154, 328, 838 |
| FokI | GGATG | 3 cut(s) | 1068, 1384, 1568 |
| Fsp4HI | GCNGC | 3 cut(s) | 154, 328, 838 |
| FspBI | CTAG | 5 cut(s) | 591, 1275, 1346, 1532, 1752 |
| FspI | TGCGCA | 2 cut(s) | 157, 841 |
| GlaI | GCGC | 3 cut(s) | 157, 841, 1775 |
| GluI | GCNGC | 3 cut(s) | 154, 328, 838 |
| HaeII | RGCGCY | 1 cut(s) | 1777 |
| HaeIII | GGCC | 5 cut(s) | 146, 508, 830, 1192, 1738 |
| HapII | CCGG | 4 cut(s) | 315, 351, 373, 1035 |
| HhaI | GCGC | 3 cut(s) | 158, 842, 1776 |
| Hin1II | CATG | 6 cut(s) | 293, 340, 977, 1024, 1594, 1734 |
| Hin6I | GCGC | 3 cut(s) | 156, 840, 1774 |
| HinP1I | GCGC | 3 cut(s) | 156, 840, 1774 |
| HincII | GTYRAC | 1 cut(s) | 398 |
| HindII | GTYRAC | 1 cut(s) | 398 |
| HindIII | AAGCTT | 2 cut(s) | 341, 1025 |
| HinfI | GANTC | 4 cut(s) | 92, 776, 1624, 1755 |
| HpaII | CCGG | 4 cut(s) | 315, 351, 373, 1035 |
| HphI | GGTGA | 2 cut(s) | 455, 1139 |
| Hpy166II | GTNNAC | 3 cut(s) | 275, 398, 959 |
| Hpy188I | TCNGA | 3 cut(s) | 436, 1120, 1819 |
| Hpy188III | TCNNGA | 8 cut(s) | 337, 667, 1021, 1085, 1577, 1789, 1828, 1851 |
| Hpy8I | GTNNAC | 3 cut(s) | 275, 398, 959 |
| HpyAV | CCTTC | 1 cut(s) | 1824 |
| HpyCH4III | ACNGT | 5 cut(s) | 284, 551, 968, 1235, 1797 |
| HpyCH4IV | ACGT | 3 cut(s) | 681, 1527, 1613 |
| HpyCH4V | TGCA | 9 cut(s) | 192, 363, 522, 876, 1047, 1105, 1206, 1596, 1668 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 519, 649, 1044, 1203, 1602 |
| HpyF3I | CTNAG | 5 cut(s) | 204, 435, 888, 1119, 1494 |
| HpySE526I | ACGT | 3 cut(s) | 681, 1527, 1613 |
| Hsp92II | CATG | 6 cut(s) | 293, 340, 977, 1024, 1594, 1734 |
| HspAI | GCGC | 3 cut(s) | 156, 840, 1774 |
| Ksp22I | TGATCA | 2 cut(s) | 286, 970 |
| LguI | GCTCTTC | 3 cut(s) | 225, 909, 978 |
| LmnI | GCTCC | 2 cut(s) | 335, 1771 |
| Lsp1109I | GCAGC | 3 cut(s) | 140, 339, 824 |
| MaeI | CTAG | 5 cut(s) | 591, 1275, 1346, 1532, 1752 |
| MaeII | ACGT | 3 cut(s) | 681, 1527, 1613 |
| MfeI | CAATTG | 2 cut(s) | 117, 801 |
| MflI | RGATCY | 5 cut(s) | 423, 571, 1107, 1255, 1489 |
| MlyI | GAGTC | 1 cut(s) | 1633 |
| MmeI | TCCRAC | 3 cut(s) | 549, 1233, 1452 |
| MseI | TTAA | 2 cut(s) | 345, 1029 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1347 |
| MspI | CCGG | 4 cut(s) | 315, 351, 373, 1035 |
| MspR9I | CCNGG | 6 cut(s) | 163, 352, 373, 510, 847, 1194 |
| MunI | CAATTG | 2 cut(s) | 117, 801 |
| MvaI | CCWGG | 4 cut(s) | 163, 510, 847, 1194 |
| MvnI | CGCG | 1 cut(s) | 668 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 519, 649, 1044, 1203, 1602 |
| NciI | CCSGG | 2 cut(s) | 352, 373 |
| NcoI | CCATGG | 1 cut(s) | 1730 |
| NdeI | CATATG | 1 cut(s) | 1720 |
| NlaIII | CATG | 6 cut(s) | 293, 340, 977, 1024, 1594, 1734 |
| NlaIV | GGNNCC | 4 cut(s) | 6, 573, 690, 1257 |
| NmeAIII | GCCGAG | 2 cut(s) | 669, 1353 |
| NruI | TCGCGA | 1 cut(s) | 668 |
| NsbI | TGCGCA | 2 cut(s) | 157, 841 |
| PagI | TCATGA | 2 cut(s) | 336, 1020 |
| PceI | AGGCCT | 2 cut(s) | 508, 1192 |
| PciSI | GCTCTTC | 3 cut(s) | 225, 909, 978 |
| PfeI | GAWTC | 3 cut(s) | 92, 776, 1755 |
| PkrI | GCNGC | 3 cut(s) | 155, 329, 839 |
| PleI | GAGTC | 1 cut(s) | 1632 |
| PpsI | GAGTC | 1 cut(s) | 1632 |
| PshAI | GACNNNNGTC | 2 cut(s) | 624, 1308 |
| PsiI | TTATAA | 2 cut(s) | 12, 696 |
| Psp6I | CCWGG | 4 cut(s) | 161, 508, 845, 1192 |
| PspGI | CCWGG | 4 cut(s) | 161, 508, 845, 1192 |
| PspN4I | GGNNCC | 4 cut(s) | 6, 573, 690, 1257 |
| PspPI | GGNCC | 2 cut(s) | 4, 688 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 158, 190, 842, 874 |
| PsuI | RGATCY | 5 cut(s) | 423, 571, 1107, 1255, 1489 |
| RruI | TCGCGA | 1 cut(s) | 668 |
| RsaI | GTAC | 9 cut(s) | 30, 255, 542, 589, 714, 939, 1226, 1273, 1376 |
| RsaNI | GTAC | 9 cut(s) | 29, 254, 541, 588, 713, 938, 1225, 1272, 1375 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1347 |
| SapI | GCTCTTC | 3 cut(s) | 225, 909, 978 |
| SaqAI | TTAA | 2 cut(s) | 345, 1029 |
| SatI | GCNGC | 3 cut(s) | 154, 328, 838 |
| Sau96I | GGNCC | 2 cut(s) | 4, 688 |
| ScaI | AGTACT | 2 cut(s) | 589, 1273 |
| SchI | GAGTC | 1 cut(s) | 1633 |
| ScrFI | CCNGG | 6 cut(s) | 163, 352, 373, 510, 847, 1194 |
| SfcI | CTRYAG | 1 cut(s) | 1039 |
| SinI | GGWCC | 2 cut(s) | 4, 688 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1347 |
| SmlI | CTYRAG | 2 cut(s) | 234, 918 |
| SmoI | CTYRAG | 2 cut(s) | 234, 918 |
| SseBI | AGGCCT | 2 cut(s) | 508, 1192 |
| SsiI | CCGC | 3 cut(s) | 594, 1278, 1369 |
| SspI | AATATT | 4 cut(s) | 583, 1267, 1300, 1711 |
| SspMI | CTAG | 5 cut(s) | 591, 1275, 1346, 1532, 1752 |
| StuI | AGGCCT | 2 cut(s) | 508, 1192 |
| StyD4I | CCNGG | 6 cut(s) | 161, 350, 371, 508, 845, 1192 |
| StyI | CCWWGG | 2 cut(s) | 1357, 1730 |
| TaaI | ACNGT | 5 cut(s) | 284, 551, 968, 1235, 1797 |
| TaiI | ACGT | 3 cut(s) | 684, 1530, 1616 |
| TaqI | TCGA | 2 cut(s) | 243, 927 |
| TatI | WGTACW | 2 cut(s) | 587, 1271 |
| TfiI | GAWTC | 3 cut(s) | 92, 776, 1755 |
| Tru1I | TTAA | 2 cut(s) | 345, 1029 |
| Tru9I | TTAA | 2 cut(s) | 345, 1029 |
| TscAI | CASTG | 2 cut(s) | 264, 948 |
| TseI | GCWGC | 3 cut(s) | 153, 327, 837 |
| TspDTI | ATGAA | 8 cut(s) | 256, 353, 484, 940, 1037, 1168, 1680, 1692 |
| TspGWI | ACGGA | 2 cut(s) | 564, 1248 |
| TspRI | CASTG | 2 cut(s) | 264, 948 |
| VpaK11BI | GGWCC | 2 cut(s) | 4, 688 |
| XapI | RAATTY | 2 cut(s) | 1423, 1571 |
| XspI | CTAG | 5 cut(s) | 591, 1275, 1346, 1532, 1752 |
| ZrmI | AGTACT | 2 cut(s) | 589, 1273 |