MD14G1187900.v1.1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000270
Physical Location & Seq
Forward (+)
27990723 .. 27992156
1434 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1187900.v1.1.491

Sequence Viewer

Length: 1434 bp
ATGTTGTATATTGATGATCTCCCTGATTTTGTATTGGTGGAAATCCTTTGTCGACTTCCCCGCGAATCCGCAGTTCAATGCAGGTGTGTTTCCAAGCGTTGGTTCAGTCTCCTCTCTGATGATTACTTTCGTTTATGCTTTTTGTGTGTCCAAGATAAAAAGCGGACGCCGGAGCCAACTACTCTGATCTTCACGAATCCAAAGGATGCGAGGGATTTCTTTACCATGTCGGAGCAGCCTCTGGTGGCCGAAAACCAAGGCCGCCCCCGCAGCTTCTCTTTGAGTTTCCTCCCTTGTTTTCAAAGGCCTGTCGACACACCAGACAAGGAACCAATTGTAGTAGCGGCATGTCGGGACTTAGTATTATGCTGCGCAGCCAAGACTAGTTCGGACTACTACGTCTGCAATCCATCCACCAAGCAATGGGACGCCATTCCTTCCCTTTCTCATCAATGCTGCCACGAGGAAGCGTGGGTCGGATTTATCTGCGAACCCTACTACTATAAGAAGGAATGCAGGGAAGATGGCAACGATAGCCGAAAGGAAAAAAGTAATACATTCCAACTTAACGTTGAGAGTAGGTACAGGATCGTGCGATTTACTCATTCATCCTTGCCGCAGCCCTCGAAAATAAAGCTCGAGATTTTCACTTCCGAGACTGGTAAATGGACAGAACATATTGCATCAGGATTTTCACTTGGTGGTTTGAATCGCACAGCGGTTGCTTACAAAGGAAATCTGTATTGGTGGAACTTTAACGCTGGCTGGGCGATCGGTTTGGATATTGAACATCTTAAATTGCGTTGCATTCGTGGGCCTCAAGATGATCAGTTCATCACTCCCATCCATTCATATTTTGAAATCCTAGAATCCATTAAAGCAAGATCTCGAAAAGGATATTGTATGCGAACGTGCCAGTTCTCTCAAAATCAAAACCGTCCAATTTTTCTGAGTGTTTGGGAGTACTTGGAAGATGAAGAGGCCAATAACGCTGGCAAATATTGGTATTTAGTAGGCAGAGTTTCCCTGGACTGGATGAAATCGCAAAATCCATTGGCCATGGAATCGAAGGAGAAAAAGGTAAGGACGCTCGGTTTTGACCCAAATAATGAGGATATCTTATATGTACAAGTACGTGGATACGTTGTTATTTATAACATTGGCGCAAAAACGGTAGAAGTGGTTTGGAAAACTGAGCCCACTTATGATCATGTTGTGTACCGACGAGTTGTCTTTCCATATATGCACCCATGGTGGCCGACGACACTTCCTAAACGCAAACAACTACGGGAGACCTCTAGAAGACCAAGCAGCAACAGGGATGATGAGACGCAACGGCGGAGCCAGGAATTATTAGGTTGGTGGCCTAAGTTAAAATTATTACTACGAAATCAAATGCTCAATTTTTTTCGTTGCCTAAGTAAAGCTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

478

Amino Acids

56.09

Weight (kDa)

8.8

Isoelectric Point (pI)

46.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 4 - 44 1.9e-08 F-box domain
F-box-like PF12937 4 - 47 2.9e-07 F-box-like
b-prop_At3g26010-like PF24750 95 - 360 1.2e-09 F-box protein At3g26010-like, beta-propeller
FBA_1 PF07734 113 - 251 3.8e-06 F-box associated beta propeller domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1155
AarI CACCTGC 1 cut(s) 72
AasI GACNNNNNNGTC 1 cut(s) 398
Acc16I TGCGCA 1 cut(s) 373
Acc36I ACCTGC 1 cut(s) 72
AccB7I CCANNNNNTGG 2 cut(s) 99, 423
AccI GTMKAC 2 cut(s) 52, 312
AccII CGCG 1 cut(s) 63
AciI CCGC 9 cut(s) 61, 69, 163, 262, 268, 344, 617, 719, 1339
AclI AACGTT 1 cut(s) 570
AclWI GGATC 1 cut(s) 596
AcoI YGGCCR 3 cut(s) 246, 1056, 1256
AcyI GRCGYC 2 cut(s) 167, 429
AdeI CACNNNGTG 1 cut(s) 701
AfaI GTAC 5 cut(s) 584, 965, 1128, 1134, 1220
AfiI CCNNNNNNNGG 3 cut(s) 99, 423, 1032
AgsI TTSAA 5 cut(s) 77, 302, 709, 788, 860
AhdI GACNNNNNGTC 1 cut(s) 1229
AhlI ACTAGT 1 cut(s) 383
AjnI CCWGG 2 cut(s) 1026, 1344
AjuI GAANNNNNNNTTGG 4 cut(s) 86, 118, 727, 759
AluBI AGCT 3 cut(s) 273, 637, 1427
AluI AGCT 3 cut(s) 273, 637, 1427
Alw26I GTCTC 4 cut(s) 113, 650, 1286, 1322
AlwI GGATC 1 cut(s) 596
AlwNI CAGNNNCTG 1 cut(s) 241
Ama87I CYCGRG 1 cut(s) 638
AoxI GGCC 8 cut(s) 246, 259, 305, 815, 981, 1056, 1256, 1364
ApeKI GCWGC 7 cut(s) 235, 270, 369, 374, 456, 619, 1311
AspLEI GCGC 2 cut(s) 374, 1166
AspS9I GGNCC 1 cut(s) 815
AvaI CYCGRG 1 cut(s) 638
BalI TGGCCA 1 cut(s) 1058
BanII GRGCYC 1 cut(s) 1200
BauI CACGAG 1 cut(s) 461
BbsI GAAGAC 1 cut(s) 1309
BbvI GCAGC 7 cut(s) 247, 282, 356, 386, 443, 631, 1323
BccI CCATC 3 cut(s) 418, 518, 851
BceAI ACGGC 1 cut(s) 1352
BciT130I CCWGG 2 cut(s) 1028, 1346
BciVI GTATCC 1 cut(s) 1133
BclI TGATCA 2 cut(s) 826, 1207
BcoDI GTCTC 4 cut(s) 113, 650, 1286, 1322
BcuI ACTAGT 1 cut(s) 383
BfaI CTAG 3 cut(s) 384, 866, 1299
BfuAI ACCTGC 1 cut(s) 72
BfuI GTATCC 1 cut(s) 1133
BglII AGATCT 1 cut(s) 884
BmcAI AGTACT 1 cut(s) 965
Bme1390I CCNGG 2 cut(s) 1028, 1346
BmeRI GACNNNNNGTC 1 cut(s) 1229
BmeT110I CYCGRG 1 cut(s) 638
BmgT120I GGNCC 1 cut(s) 815
BmiI GGNNCC 3 cut(s) 174, 330, 1343
BmrFI CCNGG 2 cut(s) 1028, 1346
BmsI GCATC 2 cut(s) 196, 692
BpiI GAAGAC 1 cut(s) 1309
BpuEI CTTGAG 1 cut(s) 804
BsaAI YACGTR 1 cut(s) 1136
BsaHI GRCGYC 2 cut(s) 167, 429
BsaI GGTCTC 1 cut(s) 1286
BsaJI CCNNGG 4 cut(s) 256, 1026, 1059, 1250
Bsc4I CCNNNNNNNGG 3 cut(s) 99, 423, 1032
Bse1I ACTGG 3 cut(s) 664, 916, 1037
Bse3DI GCAATG 1 cut(s) 428
BseBI CCWGG 2 cut(s) 1028, 1346
BseDI CCNNGG 4 cut(s) 256, 1026, 1059, 1250
BseGI GGATG 6 cut(s) 211, 410, 608, 843, 1041, 1327
BseLI CCNNNNNNNGG 3 cut(s) 99, 423, 1032
BseMI GCAATG 1 cut(s) 428
BseMII CTCAG 2 cut(s) 941, 1185
BseNI ACTGG 3 cut(s) 664, 916, 1037
BseRI GAGGAG 1 cut(s) 101
BseXI GCAGC 7 cut(s) 247, 282, 356, 386, 443, 631, 1323
BseYI CCCAGC 1 cut(s) 765
Bsh1236I CGCG 1 cut(s) 63
Bsh1285I CGRYCG 1 cut(s) 774
BshFI GGCC 8 cut(s) 248, 261, 307, 817, 983, 1058, 1258, 1366
BsiEI CGRYCG 1 cut(s) 774
BsiHKCI CYCGRG 1 cut(s) 638
BsiSI CCGG 1 cut(s) 170
BslFI GGGAC 2 cut(s) 368, 440
BslI CCNNNNNNNGG 3 cut(s) 99, 423, 1032
BsmAI GTCTC 4 cut(s) 113, 650, 1286, 1322
BsmBI CGTCTC 1 cut(s) 1322
BsmFI GGGAC 2 cut(s) 368, 440
BsmI GAATGC 2 cut(s) 518, 807
BsnI GGCC 8 cut(s) 248, 261, 307, 817, 983, 1058, 1258, 1366
Bso31I GGTCTC 1 cut(s) 1286
BsoBI CYCGRG 1 cut(s) 638
Bsp1286I GDGCHC 1 cut(s) 1200
Bsp1407I TGTACA 1 cut(s) 1126
Bsp143I GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
Bsp19I CCATGG 2 cut(s) 1059, 1250
BspACI CCGC 9 cut(s) 61, 69, 163, 262, 268, 344, 617, 719, 1339
BspANI GGCC 8 cut(s) 248, 261, 307, 817, 983, 1058, 1258, 1366
BspCNI CTCAG 2 cut(s) 942, 1186
BspFNI CGCG 1 cut(s) 63
BspLI GGNNCC 3 cut(s) 174, 330, 1343
BspMI ACCTGC 1 cut(s) 72
BspPI GGATC 1 cut(s) 596
BspTNI GGTCTC 1 cut(s) 1286
BsrDI GCAATG 1 cut(s) 428
BsrGI TGTACA 1 cut(s) 1126
BsrI ACTGG 3 cut(s) 664, 916, 1037
BssECI CCNNGG 4 cut(s) 256, 1026, 1059, 1250
BssMI GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
BssNI GRCGYC 2 cut(s) 167, 429
BssSI CACGAG 1 cut(s) 461
BssT1I CCWWGG 3 cut(s) 256, 1059, 1250
Bst2BI CACGAG 1 cut(s) 461
Bst2UI CCWGG 2 cut(s) 1028, 1346
Bst4CI ACNGT 2 cut(s) 938, 1174
Bst6I CTCTTC 1 cut(s) 972
BstACI GRCGYC 2 cut(s) 167, 429
BstAUI TGTACA 1 cut(s) 1126
BstBAI YACGTR 1 cut(s) 1136
BstC8I GCNNGC 2 cut(s) 763, 994
BstDEI CTNAG 5 cut(s) 358, 950, 1194, 1368, 1418
BstDSI CCRYGG 2 cut(s) 1059, 1250
BstF5I GGATG 6 cut(s) 211, 410, 608, 843, 1041, 1327
BstFNI CGCG 1 cut(s) 63
BstHHI GCGC 2 cut(s) 374, 1166
BstKTI GATC 7 cut(s) 19, 189, 591, 774, 829, 887, 1210
BstMAI GTCTC 4 cut(s) 113, 650, 1286, 1322
BstMBI GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
BstMCI CGRYCG 1 cut(s) 774
BstMWI GCNNNNNNNGC 5 cut(s) 267, 270, 534, 767, 989
BstNI CCWGG 2 cut(s) 1028, 1346
BstNSI RCATGY 1 cut(s) 351
BstSCI CCNGG 2 cut(s) 1026, 1344
BstUI CGCG 1 cut(s) 63
BstV1I GCAGC 7 cut(s) 247, 282, 356, 386, 443, 631, 1323
BstV2I GAAGAC 1 cut(s) 1309
BstX2I RGATCY 1 cut(s) 884
BstYI RGATCY 1 cut(s) 884
BsuI GTATCC 1 cut(s) 1133
BsuRI GGCC 8 cut(s) 248, 261, 307, 817, 983, 1058, 1258, 1366
BtgI CCRYGG 2 cut(s) 1059, 1250
BtsCI GGATG 6 cut(s) 211, 410, 608, 843, 1041, 1327
BveI ACCTGC 1 cut(s) 72
Cac8I GCNNGC 2 cut(s) 763, 994
CaiI CAGNNNCTG 1 cut(s) 241
CfoI GCGC 2 cut(s) 374, 1166
Cfr13I GGNCC 1 cut(s) 815
CseI GACGC 4 cut(s) 175, 437, 1096, 1339
Csp6I GTAC 5 cut(s) 583, 964, 1127, 1133, 1219
CviAII CATG 5 cut(s) 226, 348, 1060, 1211, 1251
CviQI GTAC 5 cut(s) 583, 964, 1127, 1133, 1219
DdeI CTNAG 5 cut(s) 358, 950, 1194, 1368, 1418
DpnI GATC 7 cut(s) 18, 188, 590, 773, 828, 886, 1209
DpnII GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
DraIII CACNNNGTG 1 cut(s) 701
DrdI GACNNNNNNGTC 1 cut(s) 398
DriI GACNNNNNGTC 1 cut(s) 1229
DseDI GACNNNNNNGTC 1 cut(s) 398
EaeI YGGCCR 3 cut(s) 246, 1056, 1256
Eam1104I CTCTTC 1 cut(s) 972
Eam1105I GACNNNNNGTC 1 cut(s) 1229
EarI CTCTTC 1 cut(s) 972
EciI GGCGGA 1 cut(s) 1354
Eco130I CCWWGG 3 cut(s) 256, 1059, 1250
Eco147I AGGCCT 1 cut(s) 307
Eco24I GRGCYC 1 cut(s) 1200
Eco31I GGTCTC 1 cut(s) 1286
Eco32I GATATC 1 cut(s) 1117
Eco88I CYCGRG 1 cut(s) 638
EcoRII CCWGG 2 cut(s) 1026, 1344
EcoRV GATATC 1 cut(s) 1117
EcoT14I CCWWGG 3 cut(s) 256, 1059, 1250
EcoT38I GRGCYC 1 cut(s) 1200
ErhI CCWWGG 3 cut(s) 256, 1059, 1250
Esp3I CGTCTC 1 cut(s) 1322
FaeI CATG 5 cut(s) 229, 351, 1063, 1214, 1254
FaqI GGGAC 2 cut(s) 368, 440
FatI CATG 5 cut(s) 225, 347, 1059, 1210, 1250
FauI CCCGC 2 cut(s) 68, 275
FbaI TGATCA 2 cut(s) 826, 1207
FblI GTMKAC 2 cut(s) 52, 312
FokI GGATG 6 cut(s) 218, 397, 595, 830, 1048, 1334
FriOI GRGCYC 1 cut(s) 1200
FspBI CTAG 3 cut(s) 384, 866, 1299
FspI TGCGCA 1 cut(s) 373
GlaI GCGC 2 cut(s) 373, 1165
GsaI CCCAGC 1 cut(s) 769
HaeIII GGCC 8 cut(s) 248, 261, 307, 817, 983, 1058, 1258, 1366
HapII CCGG 1 cut(s) 170
HgaI GACGC 4 cut(s) 175, 437, 1096, 1339
HhaI GCGC 2 cut(s) 374, 1166
Hin1I GRCGYC 2 cut(s) 167, 429
Hin1II CATG 5 cut(s) 229, 351, 1063, 1214, 1254
Hin6I GCGC 2 cut(s) 372, 1164
HinP1I GCGC 2 cut(s) 372, 1164
HincII GTYRAC 2 cut(s) 53, 313
HindII GTYRAC 2 cut(s) 53, 313
HinfI GANTC 5 cut(s) 65, 196, 709, 869, 1064
HpaII CCGG 1 cut(s) 170
Hpy166II GTNNAC 3 cut(s) 53, 313, 1219
Hpy188I TCNGA 7 cut(s) 118, 186, 232, 391, 479, 655, 951
Hpy188III TCNNGA 7 cut(s) 193, 353, 640, 687, 821, 888, 1299
Hpy8I GTNNAC 3 cut(s) 53, 313, 1219
Hpy99I CGWCG 2 cut(s) 1227, 1264
HpyAV CCTTC 3 cut(s) 447, 502, 1063
HpyCH4III ACNGT 2 cut(s) 938, 1174
HpyCH4IV ACGT 5 cut(s) 399, 570, 911, 1135, 1143
HpyCH4V TGCA 6 cut(s) 81, 405, 516, 683, 807, 1246
HpyF10VI GCNNNNNNNGC 5 cut(s) 267, 270, 534, 767, 989
HpyF3I CTNAG 5 cut(s) 358, 950, 1194, 1368, 1418
HpySE526I ACGT 5 cut(s) 399, 570, 911, 1135, 1143
Hsp92I GRCGYC 2 cut(s) 167, 429
Hsp92II CATG 5 cut(s) 229, 351, 1063, 1214, 1254
HspAI GCGC 2 cut(s) 372, 1164
Ksp22I TGATCA 2 cut(s) 826, 1207
Kzo9I GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
LmnI GCTCC 3 cut(s) 172, 232, 1341
Lsp1109I GCAGC 7 cut(s) 247, 282, 356, 386, 443, 631, 1323
LweI GCATC 2 cut(s) 196, 692
MaeI CTAG 3 cut(s) 384, 866, 1299
MaeII ACGT 5 cut(s) 399, 570, 911, 1135, 1143
MalI GATC 7 cut(s) 18, 188, 590, 773, 828, 886, 1209
MboI GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
MboII GAAGA 5 cut(s) 181, 533, 983, 989, 1314
MfeI CAATTG 1 cut(s) 333
MflI RGATCY 1 cut(s) 884
MhlI GDGCHC 1 cut(s) 1200
MlsI TGGCCA 1 cut(s) 1058
MluCI AATT 6 cut(s) 333, 797, 942, 1349, 1376, 1402
MluNI TGGCCA 1 cut(s) 1058
MmeI TCCRAC 3 cut(s) 210, 457, 586
Mox20I TGGCCA 1 cut(s) 1058
MscI TGGCCA 1 cut(s) 1058
MseI TTAA 5 cut(s) 567, 756, 795, 876, 1373
Msp20I TGGCCA 1 cut(s) 1058
MspA1I CMGCKG 1 cut(s) 719
MspI CCGG 1 cut(s) 170
MspR9I CCNGG 2 cut(s) 1028, 1346
MunI CAATTG 1 cut(s) 333
Mva1269I GAATGC 2 cut(s) 518, 807
MvaI CCWGG 2 cut(s) 1028, 1346
MvnI CGCG 1 cut(s) 63
MwoI GCNNNNNNNGC 5 cut(s) 267, 270, 534, 767, 989
NcoI CCATGG 2 cut(s) 1059, 1250
NdeII GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
NlaIII CATG 5 cut(s) 229, 351, 1063, 1214, 1254
NlaIV GGNNCC 3 cut(s) 174, 330, 1343
NsbI TGCGCA 1 cut(s) 373
NspI RCATGY 1 cut(s) 351
PaeR7I CTCGAG 1 cut(s) 638
PaqCI CACCTGC 1 cut(s) 72
PceI AGGCCT 1 cut(s) 307
PctI GAATGC 2 cut(s) 518, 807
PfeI GAWTC 5 cut(s) 65, 196, 709, 869, 1064
PflMI CCANNNNNTGG 2 cut(s) 99, 423
Ple19I CGATCG 1 cut(s) 774
Ppu21I YACGTR 1 cut(s) 1136
PsiI TTATAA 1 cut(s) 1155
Psp1406I AACGTT 1 cut(s) 570
Psp6I CCWGG 2 cut(s) 1026, 1344
PspFI CCCAGC 1 cut(s) 765
PspGI CCWGG 2 cut(s) 1026, 1344
PspN4I GGNNCC 3 cut(s) 174, 330, 1343
PspPI GGNCC 1 cut(s) 815
PstNI CAGNNNCTG 1 cut(s) 241
PsuI RGATCY 1 cut(s) 884
PvuI CGATCG 1 cut(s) 774
RsaI GTAC 5 cut(s) 584, 965, 1128, 1134, 1220
RsaNI GTAC 5 cut(s) 583, 964, 1127, 1133, 1219
SalI GTCGAC 2 cut(s) 51, 311
SaqAI TTAA 5 cut(s) 567, 756, 795, 876, 1373
Sau3AI GATC 7 cut(s) 16, 186, 588, 771, 826, 884, 1207
Sau96I GGNCC 1 cut(s) 815
ScaI AGTACT 1 cut(s) 965
ScrFI CCNGG 2 cut(s) 1028, 1346
SduI GDGCHC 1 cut(s) 1200
SfaNI GCATC 2 cut(s) 196, 692
Sfr274I CTCGAG 1 cut(s) 638
SlaI CTCGAG 1 cut(s) 638
SmlI CTYRAG 2 cut(s) 638, 819
SmoI CTYRAG 2 cut(s) 638, 819
SpeI ACTAGT 1 cut(s) 383
Sse9I AATT 6 cut(s) 333, 797, 942, 1349, 1376, 1402
SseBI AGGCCT 1 cut(s) 307
SsiI CCGC 9 cut(s) 61, 69, 163, 262, 268, 344, 617, 719, 1339
SspI AATATT 1 cut(s) 1001
SspMI CTAG 3 cut(s) 384, 866, 1299
StuI AGGCCT 1 cut(s) 307
StyD4I CCNGG 2 cut(s) 1026, 1344
StyI CCWWGG 3 cut(s) 256, 1059, 1250
TaaI ACNGT 2 cut(s) 938, 1174
TaiI ACGT 5 cut(s) 402, 573, 914, 1138, 1146
TaqI TCGA 6 cut(s) 52, 312, 626, 639, 889, 1067
TasI AATT 6 cut(s) 333, 797, 942, 1349, 1376, 1402
TatI WGTACW 2 cut(s) 963, 1126
TauI GCSGC 3 cut(s) 264, 347, 619
TfiI GAWTC 5 cut(s) 65, 196, 709, 869, 1064
Tru1I TTAA 5 cut(s) 567, 756, 795, 876, 1373
Tru9I TTAA 5 cut(s) 567, 756, 795, 876, 1373
TseI GCWGC 7 cut(s) 235, 270, 369, 374, 456, 619, 1311
TspDTI ATGAA 5 cut(s) 597, 823, 840, 990, 1052
Van91I CCANNNNNTGG 2 cut(s) 99, 423
XbaI TCTAGA 1 cut(s) 1298
XceI RCATGY 1 cut(s) 351
XhoI CTCGAG 1 cut(s) 638
XmiI GTMKAC 2 cut(s) 52, 312
XspI CTAG 3 cut(s) 384, 866, 1299
ZrmI AGTACT 1 cut(s) 965
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.