RchiOBHm_Chr3g0450211

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000270
Physical Location & Seq
Forward (+)
1787218 .. 1788741
1524 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41755

Sequence Viewer

Length: 1524 bp
ATGAGACCTGGTGATACTGCTAGCAAAAGAAGCCGGATTACAATGTCTCAATCCCTTGGCCGGTACTCGAAAAGATCAAAACATTCCTCAAAAGTCATGATTACTATTGATGATCTTCCCGACCTTGTATTTTTTGATATCCTTCTCCGACTTCCCTTAAAATCTGCCACTCAATGCAAGTGTGTGTCCAAGCATTGGTTCGCTCTTATCTCCAGCCATTATTTTCTTTCCCGTTTTCTCTCTCTCCAATATGATAACCAAAAGTCGCTGCCCAGTACTCTCATCTTCTGGGATACCGAGAACCAGACTAAAATTTTTTCCATCTCCAAACTTTCTATGTTCAAAAAAGGCCGCTTCTCTCTCAATTTCCTCCCTCGTTATCAATCAGCAGCTCATGAAAAACAATTAGCTTTTCGGCCAGTTGTGGTAGGCTCGTGTAATGACTTAGTTCTCTGCTGCGCAACCACTTATTCACAGCGTGATTATTACATCTGCAATCCATACACCAAGCAATGGGTTGTTCTTCCTCCCGTCCCACATTGCCGGCTCCAGGTAAGAGTTGGTTTCATATGTGAACCGTACTATTACCGTAATCCAAGAGAAGAAAATAATACTAGTTACAACATCCATCTTAATGTTGACTACAGGTATGCGATTGTGCGAATACTTGAACCAGTTGAGCTAAGGAGTAATGTTTTTTCCTTCGAACTCCTGGTGCAAATCTTCTCTTCTGAGACCGGTAAGTGGACAGAGTTGGTTGTGCTGAGCCCAAGAAGATATTGTTTTGATCATTTGGTTAACAATCCAGGCCTTGTTTACAAGGGAATGTTATATTGGTCGTCTAAATGTGACGGCTATATGATTGGCTTGGATCCTTTCTTCAACAACACCACTAAATCTAATATTAGTAATTTCAACAACACCACTAATATTAGTAATACTAATGATCATAGACAATGTCATGTCATTGATTTTCCTAATGGGGAGCCAGGATCAATAAGTGTGAGCCGAGGAGGATGTCTGCGGATGCACAGGGTTTCAGAAGTTGAGGTGGCAAGATTTCGAGACGAATATGTTGCGAGTGTTTGGGAGATGAAAGATGATGGTGAGCATAATGTTGACGGAGGACGTGCTGGAAAATGGTGTTTGATAAGCACCATTTCGCTGGACAGAATTGGTTCGGAAAACCCATTGATCACCGAATGGAGTCCCCTCATTAGAAGAAGGGCTTGGGGGCTGGCTTTCGACCCCAATGATGATGATATCTTGTATCTAGAATTGTATGATCTATATGAAAAATCGGATCACCACATTGTTACGTGCAACATCCGTACAAAAACACTCAAGGTGGCTAAAACGACTTCAATTCGTGGGGTGATTGGTGTAATACCATTCACGGTGCCATGGTTGCCGACACCGGTTCCTAGACTTGAATACAACAACCACAAGGATATGCATGCCGTCCATTTTAGCAATTGTTGGTGGTGTACCGGCCGGCGAGAGCGAGGAGCTAGGTTTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

507

Amino Acids

58.81

Weight (kDa)

8.98

Isoelectric Point (pI)

45.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 36 - 76 7.1e-07 F-box domain
b-prop_At3g26010-like PF24750 135 - 454 1.1e-15 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 460
AccB1I GGYRCC 1 cut(s) 1399
AccB7I CCANNNNNTGG 2 cut(s) 195, 513
AciI CCGC 2 cut(s) 352, 1024
AclWI GGATC 4 cut(s) 866, 879, 1000, 1311
AcoI YGGCCR 3 cut(s) 58, 416, 1492
AcsI RAATTY 1 cut(s) 312
AdeI CACNNNGTG 1 cut(s) 479
AfaI GTAC 5 cut(s) 65, 277, 581, 1333, 1489
AfiI CCNNNNNNNGG 5 cut(s) 60, 195, 513, 550, 744
AgeI ACCGGT 2 cut(s) 737, 1417
AgsI TTSAA 7 cut(s) 343, 671, 883, 916, 1365, 1433, 1520
AhlI ACTAGT 1 cut(s) 614
AjiI CACGTC 1 cut(s) 1130
AjnI CCWGG 5 cut(s) 7, 549, 711, 805, 988
AjuI GAANNNNNNNTTGG 6 cut(s) 182, 214, 817, 849, 1213, 1245
AluBI AGCT 4 cut(s) 392, 410, 682, 1511
AluI AGCT 4 cut(s) 392, 410, 682, 1511
Alw26I GTCTC 3 cut(s) 51, 728, 1059
AlwI GGATC 4 cut(s) 866, 879, 1000, 1311
AoxI GGCC 5 cut(s) 58, 349, 416, 808, 1492
ApeKI GCWGC 3 cut(s) 268, 389, 456
ApoI RAATTY 1 cut(s) 312
AsiGI ACCGGT 2 cut(s) 737, 1417
Asp700I GAANNNNTTC 1 cut(s) 1177
AspLEI GCGC 1 cut(s) 461
AsuHPI GGTGA 5 cut(s) 23, 1118, 1189, 1298, 1387
AsuII TTCGAA 1 cut(s) 705
AsuNHI GCTAGC 1 cut(s) 20
BamHI GGATCC 1 cut(s) 871
BanI GGYRCC 1 cut(s) 1399
BanII GRGCYC 1 cut(s) 770
BarI GAAGNNNNNNTAC 2 cut(s) 22, 54
BauI CACGAG 1 cut(s) 433
BbvI GCAGC 3 cut(s) 255, 401, 443
BccI CCATC 3 cut(s) 329, 636, 1097
BceAI ACGGC 2 cut(s) 868, 1445
BcgI CGANNNNNNTGC 2 cut(s) 1058, 1092
BciT130I CCWGG 5 cut(s) 9, 551, 713, 807, 990
BciVI GTATCC 1 cut(s) 286
BclI TGATCA 3 cut(s) 787, 946, 1194
BcoDI GTCTC 3 cut(s) 51, 728, 1059
BcuI ACTAGT 1 cut(s) 614
BfaI CTAG 5 cut(s) 21, 615, 1274, 1425, 1512
BfmI CTRYAG 1 cut(s) 643
BfuI GTATCC 1 cut(s) 286
BisI GCNGC 4 cut(s) 269, 352, 390, 457
BlpI GCTNAGC 1 cut(s) 764
BlsI GCNGC 4 cut(s) 270, 353, 391, 458
BmcAI AGTACT 1 cut(s) 277
Bme1390I CCNGG 5 cut(s) 9, 551, 713, 807, 990
BmgBI CACGTC 1 cut(s) 1130
BmiI GGNNCC 5 cut(s) 548, 873, 987, 1401, 1422
BmrFI CCNGG 5 cut(s) 9, 551, 713, 807, 990
BmrI ACTGGG 1 cut(s) 267
BmsI GCATC 1 cut(s) 1017
BmtI GCTAGC 1 cut(s) 24
BmuI ACTGGG 1 cut(s) 267
BpmI CTGGAG 2 cut(s) 196, 533
Bpu10I CCTNAGC 1 cut(s) 683
Bpu1102I GCTNAGC 1 cut(s) 764
Bpu14I TTCGAA 1 cut(s) 705
BpuEI CTTGAG 1 cut(s) 1328
BsaAI YACGTR 1 cut(s) 1320
BsaI GGTCTC 1 cut(s) 728
BsaJI CCNNGG 3 cut(s) 55, 1009, 1403
BsaWI WCCGGW 2 cut(s) 737, 1417
Bsc4I CCNNNNNNNGG 5 cut(s) 60, 195, 513, 550, 744
Bse118I RCCGGY 6 cut(s) 60, 543, 737, 1417, 1490, 1494
Bse1I ACTGG 3 cut(s) 273, 419, 674
Bse3DI GCAATG 2 cut(s) 518, 538
BseBI CCWGG 5 cut(s) 9, 551, 713, 807, 990
BseDI CCNNGG 3 cut(s) 55, 1009, 1403
BseGI GGATG 4 cut(s) 624, 1022, 1032, 1326
BseLI CCNNNNNNNGG 5 cut(s) 60, 195, 513, 550, 744
BseMI GCAATG 2 cut(s) 518, 538
BseMII CTCAG 2 cut(s) 723, 755
BseNI ACTGG 3 cut(s) 273, 419, 674
BseRI GAGGAG 2 cut(s) 1026, 1521
BseX3I CGGCCG 1 cut(s) 1492
BseXI GCAGC 3 cut(s) 255, 401, 443
Bsh1285I CGRYCG 1 cut(s) 1495
BshFI GGCC 5 cut(s) 60, 351, 418, 810, 1494
BshNI GGYRCC 1 cut(s) 1399
BshTI ACCGGT 2 cut(s) 737, 1417
BsiEI CGRYCG 1 cut(s) 1495
BsiSI CCGG 7 cut(s) 34, 61, 544, 738, 1418, 1491, 1495
BslFI GGGAC 2 cut(s) 518, 1194
BslI CCNNNNNNNGG 5 cut(s) 60, 195, 513, 550, 744
BsmAI GTCTC 3 cut(s) 51, 728, 1059
BsmBI CGTCTC 1 cut(s) 1059
BsmFI GGGAC 2 cut(s) 518, 1194
BsnI GGCC 5 cut(s) 60, 351, 418, 810, 1494
Bso31I GGTCTC 1 cut(s) 728
Bsp119I TTCGAA 1 cut(s) 705
Bsp1286I GDGCHC 1 cut(s) 770
Bsp143I GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
Bsp1720I GCTNAGC 1 cut(s) 764
Bsp19I CCATGG 1 cut(s) 1403
BspACI CCGC 2 cut(s) 352, 1024
BspANI GGCC 5 cut(s) 60, 351, 418, 810, 1494
BspCNI CTCAG 2 cut(s) 724, 756
BspHI TCATGA 2 cut(s) 96, 394
BspLI GGNNCC 5 cut(s) 548, 873, 987, 1401, 1422
BspOI GCTAGC 1 cut(s) 24
BspPI GGATC 4 cut(s) 866, 879, 1000, 1311
BspT104I TTCGAA 1 cut(s) 705
BspT107I GGYRCC 1 cut(s) 1399
BspTNI GGTCTC 1 cut(s) 728
BsrDI GCAATG 2 cut(s) 518, 538
BsrFI RCCGGY 6 cut(s) 60, 543, 737, 1417, 1490, 1494
BsrI ACTGG 3 cut(s) 273, 419, 674
BssAI RCCGGY 6 cut(s) 60, 543, 737, 1417, 1490, 1494
BssECI CCNNGG 3 cut(s) 55, 1009, 1403
BssMI GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
BssSI CACGAG 1 cut(s) 433
BssT1I CCWWGG 2 cut(s) 55, 1403
Bst2BI CACGAG 1 cut(s) 433
Bst2UI CCWGG 5 cut(s) 9, 551, 713, 807, 990
Bst4CI ACNGT 3 cut(s) 579, 590, 1399
Bst6I CTCTTC 1 cut(s) 733
BstBAI YACGTR 1 cut(s) 1320
BstBI TTCGAA 1 cut(s) 705
BstC8I GCNNGC 5 cut(s) 22, 545, 1239, 1458, 1496
BstDEI CTNAG 4 cut(s) 445, 683, 732, 764
BstDSI CCRYGG 1 cut(s) 1403
BstF5I GGATG 4 cut(s) 624, 1022, 1032, 1326
BstHHI GCGC 1 cut(s) 461
BstKTI GATC 9 cut(s) 77, 115, 790, 874, 949, 995, 1197, 1288, 1306
BstMAI GTCTC 3 cut(s) 51, 728, 1059
BstMBI GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
BstMCI CGRYCG 1 cut(s) 1495
BstMWI GCNNNNNNNGC 2 cut(s) 30, 1408
BstNI CCWGG 5 cut(s) 9, 551, 713, 807, 990
BstNSI RCATGY 1 cut(s) 1460
BstSCI CCNGG 5 cut(s) 7, 549, 711, 805, 988
BstSFI CTRYAG 1 cut(s) 643
BstV1I GCAGC 3 cut(s) 255, 401, 443
BstX2I RGATCY 1 cut(s) 871
BstXI CCANNNNNNTGG 1 cut(s) 1165
BstYI RGATCY 1 cut(s) 871
BstZI CGGCCG 1 cut(s) 1492
BsuI GTATCC 1 cut(s) 286
BsuRI GGCC 5 cut(s) 60, 351, 418, 810, 1494
BtgI CCRYGG 1 cut(s) 1403
BtrI CACGTC 1 cut(s) 1130
BtsCI GGATG 4 cut(s) 624, 1022, 1032, 1326
Cac8I GCNNGC 5 cut(s) 22, 545, 1239, 1458, 1496
CciI TCATGA 2 cut(s) 96, 394
CfoI GCGC 1 cut(s) 461
Cfr10I RCCGGY 6 cut(s) 60, 543, 737, 1417, 1490, 1494
CsiI ACCWGGT 1 cut(s) 7
Csp6I GTAC 5 cut(s) 64, 276, 580, 1332, 1488
CspAI ACCGGT 2 cut(s) 737, 1417
CviAII CATG 5 cut(s) 97, 395, 962, 1404, 1457
CviQI GTAC 5 cut(s) 64, 276, 580, 1332, 1488
DdeI CTNAG 4 cut(s) 445, 683, 732, 764
DpnI GATC 9 cut(s) 76, 114, 789, 873, 948, 994, 1196, 1287, 1305
DpnII GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
DraIII CACNNNGTG 1 cut(s) 479
EaeI YGGCCR 3 cut(s) 58, 416, 1492
EagI CGGCCG 1 cut(s) 1492
Eam1104I CTCTTC 1 cut(s) 733
EarI CTCTTC 1 cut(s) 733
EclXI CGGCCG 1 cut(s) 1492
Eco130I CCWWGG 2 cut(s) 55, 1403
Eco147I AGGCCT 1 cut(s) 810
Eco24I GRGCYC 1 cut(s) 770
Eco31I GGTCTC 1 cut(s) 728
Eco32I GATATC 2 cut(s) 139, 1264
Eco52I CGGCCG 1 cut(s) 1492
EcoRII CCWGG 5 cut(s) 7, 549, 711, 805, 988
EcoRV GATATC 2 cut(s) 139, 1264
EcoT14I CCWWGG 2 cut(s) 55, 1403
EcoT22I ATGCAT 1 cut(s) 1458
EcoT38I GRGCYC 1 cut(s) 770
ErhI CCWWGG 2 cut(s) 55, 1403
Esp3I CGTCTC 1 cut(s) 1059
FaeI CATG 5 cut(s) 100, 398, 965, 1407, 1460
FalI AAGNNNNNCTT 2 cut(s) 1213, 1245
FaqI GGGAC 2 cut(s) 518, 1194
FatI CATG 5 cut(s) 96, 394, 961, 1403, 1456
FauNDI CATATG 1 cut(s) 569
FbaI TGATCA 3 cut(s) 787, 946, 1194
Fnu4HI GCNGC 4 cut(s) 269, 352, 390, 457
FokI GGATG 4 cut(s) 611, 1029, 1039, 1313
FriOI GRGCYC 1 cut(s) 770
Fsp4HI GCNGC 4 cut(s) 269, 352, 390, 457
FspBI CTAG 5 cut(s) 21, 615, 1274, 1425, 1512
FspI TGCGCA 1 cut(s) 460
GlaI GCGC 1 cut(s) 460
GluI GCNGC 4 cut(s) 269, 352, 390, 457
GsuI CTGGAG 2 cut(s) 196, 533
HaeIII GGCC 5 cut(s) 60, 351, 418, 810, 1494
HapII CCGG 7 cut(s) 34, 61, 544, 738, 1418, 1491, 1495
HhaI GCGC 1 cut(s) 461
Hin1II CATG 5 cut(s) 100, 398, 965, 1407, 1460
Hin6I GCGC 1 cut(s) 459
HinP1I GCGC 1 cut(s) 459
HincII GTYRAC 3 cut(s) 640, 799, 1120
HindII GTYRAC 3 cut(s) 640, 799, 1120
HinfI GANTC 1 cut(s) 1207
HpaI GTTAAC 1 cut(s) 799
HpaII CCGG 7 cut(s) 34, 61, 544, 738, 1418, 1491, 1495
HphI GGTGA 5 cut(s) 23, 1118, 1189, 1298, 1387
Hpy166II GTNNAC 7 cut(s) 575, 640, 747, 799, 817, 1120, 1488
Hpy188I TCNGA 5 cut(s) 149, 733, 1042, 1183, 1303
Hpy188III TCNNGA 5 cut(s) 97, 119, 395, 1064, 1274
Hpy8I GTNNAC 7 cut(s) 575, 640, 747, 799, 817, 1120, 1488
HpyAV CCTTC 3 cut(s) 152, 712, 1218
HpyCH4III ACNGT 3 cut(s) 579, 590, 1399
HpyCH4IV ACGT 2 cut(s) 1129, 1319
HpyCH4V TGCA 6 cut(s) 177, 495, 718, 1030, 1323, 1456
HpyF10VI GCNNNNNNNGC 2 cut(s) 30, 1408
HpyF3I CTNAG 4 cut(s) 445, 683, 732, 764
HpySE526I ACGT 2 cut(s) 1129, 1319
Hsp92II CATG 5 cut(s) 100, 398, 965, 1407, 1460
HspAI GCGC 1 cut(s) 459
KroI GCCGGC 2 cut(s) 543, 1494
KroNI GCCGGC 2 cut(s) 545, 1496
Ksp22I TGATCA 3 cut(s) 787, 946, 1194
KspAI GTTAAC 1 cut(s) 799
Kzo9I GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
LmnI GCTCC 3 cut(s) 552, 985, 1508
Lsp1109I GCAGC 3 cut(s) 255, 401, 443
LweI GCATC 1 cut(s) 1017
MabI ACCWGGT 1 cut(s) 7
MaeI CTAG 5 cut(s) 21, 615, 1274, 1425, 1512
MaeII ACGT 2 cut(s) 1129, 1319
MaeIII GTNAC 3 cut(s) 617, 848, 1315
MalI GATC 9 cut(s) 76, 114, 789, 873, 948, 994, 1196, 1287, 1305
MboI GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
MboII GAAGA 9 cut(s) 107, 277, 515, 614, 715, 720, 786, 871, 1233
MfeI CAATTG 1 cut(s) 1474
MflI RGATCY 1 cut(s) 871
MhlI GDGCHC 1 cut(s) 770
MluCI AATT 8 cut(s) 312, 364, 404, 910, 1173, 1277, 1365, 1474
MlyI GAGTC 1 cut(s) 1216
MmeI TCCRAC 1 cut(s) 172
Mph1103I ATGCAT 1 cut(s) 1458
MroNI GCCGGC 2 cut(s) 543, 1494
MroXI GAANNNNTTC 1 cut(s) 1177
MseI TTAA 3 cut(s) 158, 633, 798
MslI CAYNNNNRTG 1 cut(s) 633
MspI CCGG 7 cut(s) 34, 61, 544, 738, 1418, 1491, 1495
MspR9I CCNGG 5 cut(s) 9, 551, 713, 807, 990
MunI CAATTG 1 cut(s) 1474
MvaI CCWGG 5 cut(s) 9, 551, 713, 807, 990
MwoI GCNNNNNNNGC 2 cut(s) 30, 1408
NaeI GCCGGC 2 cut(s) 545, 1496
NcoI CCATGG 1 cut(s) 1403
NdeI CATATG 1 cut(s) 569
NdeII GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
NgoMIV GCCGGC 2 cut(s) 543, 1494
NheI GCTAGC 1 cut(s) 20
NlaIII CATG 5 cut(s) 100, 398, 965, 1407, 1460
NlaIV GGNNCC 5 cut(s) 548, 873, 987, 1401, 1422
NmeAIII GCCGAG 1 cut(s) 1034
NmuCI GTSAC 1 cut(s) 848
NsbI TGCGCA 1 cut(s) 460
NsiI ATGCAT 1 cut(s) 1458
NspI RCATGY 1 cut(s) 1460
NspV TTCGAA 1 cut(s) 705
PaeI GCATGC 1 cut(s) 1460
PagI TCATGA 2 cut(s) 96, 394
PceI AGGCCT 1 cut(s) 810
PdiI GCCGGC 2 cut(s) 545, 1496
PdmI GAANNNNTTC 1 cut(s) 1177
PflFI GACNNNGTC 1 cut(s) 957
PflMI CCANNNNNTGG 2 cut(s) 195, 513
PinAI ACCGGT 2 cut(s) 737, 1417
PkrI GCNGC 4 cut(s) 270, 353, 391, 458
PleI GAGTC 1 cut(s) 1215
PpsI GAGTC 1 cut(s) 1215
Ppu21I YACGTR 1 cut(s) 1320
Psp6I CCWGG 5 cut(s) 7, 549, 711, 805, 988
PspGI CCWGG 5 cut(s) 7, 549, 711, 805, 988
PspN4I GGNNCC 5 cut(s) 548, 873, 987, 1401, 1422
PsuI RGATCY 1 cut(s) 871
PsyI GACNNNGTC 1 cut(s) 957
RsaI GTAC 5 cut(s) 65, 277, 581, 1333, 1489
RsaNI GTAC 5 cut(s) 64, 276, 580, 1332, 1488
RseI CAYNNNNRTG 1 cut(s) 633
SaqAI TTAA 3 cut(s) 158, 633, 798
SatI GCNGC 4 cut(s) 269, 352, 390, 457
Sau3AI GATC 9 cut(s) 74, 112, 787, 871, 946, 992, 1194, 1285, 1303
ScaI AGTACT 1 cut(s) 277
SchI GAGTC 1 cut(s) 1216
ScrFI CCNGG 5 cut(s) 9, 551, 713, 807, 990
SduI GDGCHC 1 cut(s) 770
SexAI ACCWGGT 1 cut(s) 7
SfaNI GCATC 1 cut(s) 1017
SfcI CTRYAG 1 cut(s) 643
SfuI TTCGAA 1 cut(s) 705
SmiMI CAYNNNNRTG 1 cut(s) 633
SmlI CTYRAG 1 cut(s) 1343
SmoI CTYRAG 1 cut(s) 1343
SpeI ACTAGT 1 cut(s) 614
SphI GCATGC 1 cut(s) 1460
Sse9I AATT 8 cut(s) 312, 364, 404, 910, 1173, 1277, 1365, 1474
SseBI AGGCCT 1 cut(s) 810
SsiI CCGC 2 cut(s) 352, 1024
SspI AATATT 2 cut(s) 904, 931
SspMI CTAG 5 cut(s) 21, 615, 1274, 1425, 1512
StuI AGGCCT 1 cut(s) 810
StyD4I CCNGG 5 cut(s) 7, 549, 711, 805, 988
StyI CCWWGG 2 cut(s) 55, 1403
TaaI ACNGT 3 cut(s) 579, 590, 1399
TaiI ACGT 2 cut(s) 1132, 1322
TaqI TCGA 4 cut(s) 68, 705, 1063, 1245
TasI AATT 8 cut(s) 312, 364, 404, 910, 1173, 1277, 1365, 1474
TatI WGTACW 1 cut(s) 275
TauI GCSGC 1 cut(s) 354
Tru1I TTAA 3 cut(s) 158, 633, 798
Tru9I TTAA 3 cut(s) 158, 633, 798
TseFI GTSAC 1 cut(s) 848
TseI GCWGC 3 cut(s) 268, 389, 456
Tsp45I GTSAC 1 cut(s) 848
TspDTI ATGAA 4 cut(s) 411, 556, 1109, 1308
TspGWI ACGGA 2 cut(s) 1137, 1319
Tth111I GACNNNGTC 1 cut(s) 957
Van91I CCANNNNNTGG 2 cut(s) 195, 513
XapI RAATTY 1 cut(s) 312
XbaI TCTAGA 1 cut(s) 1273
XceI RCATGY 1 cut(s) 1460
XcmI CCANNNNNNNNNTGG 1 cut(s) 557
XmnI GAANNNNTTC 1 cut(s) 1177
XspI CTAG 5 cut(s) 21, 615, 1274, 1425, 1512
ZrmI AGTACT 1 cut(s) 277
Zsp2I ATGCAT 1 cut(s) 1458
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.