RLG00000025786

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0000270
Physical Location & Seq
Reverse (-)
48272329 .. 48273939
1611 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000025786

Sequence Viewer

Length: 1611 bp
ATGTCCAGCACCATGATCAAAAGAAGCCGCATGGCTCAACCACCACCATCAAAATCCACGATTAATAATCTCCCTGACCTTGTATTGGTCGAAATCCTTTGTCGACTCCCTCACAAAAAACTTATTTTTCGATGCAAGCTCGTGTCCAAGCGTTGGCGCACCCTCCTCTCTGATCCTTATTTTGTTAACCGCTTTCTATGCATCCAACATGATCATCATAACCCCTTTCTGAATGATTATGTTACTTATATGATTCCCTATAGGTATGCAAAGCATAAGACTTTAGTCCTCACCATGTCATCCGAGCCTCCTCCTCCTCCTCTGTTAGAAGCCAGCATATCAAGCATTTTCTCTTTCCTCCCTTGTTTTCAAGGCCATGAATATGCCGAGAAGGGCGATAAGCTCTATGTGACAGGGACTTATAATGACTTGGTCTTGTGCTCGCCAACTAAAACTGCTCAACGTGATTACTACATATGCAATTCCTACACCAAGGAATGGATTCGTCTTCCTCCCCCCCGTTATAGACATTATTCTGATGATTTAGCAGTATCGGCAGGATTCATTTGTGATCCCTACTGCAATATTAAGGAAGACGATACTAGTAGCAACAGCGCTATCATCAAGGTTAATGCCGAGTATAGGTGCAGGATTGTGCGAATACTTCCTAACCAAGATTGCAAGGGATTTGATGTGGAGATATTTTCTTCCGAGACTGGTGAATGGAGGGAGTATCCATCGTCTAAGATATTATGCCAACAACGACCCTATACTACTTTTCAGTGTCCAAGCGTTGCTTGCAATGGAAAGCTGTATTGGCTGAATGACCGAGGCTCTATTTTTGAGTTGGATCCGTTCAATATTTGTGCTGGCGATGTTATTGATAAATGTCGTTTCATTGATGCACCGACCCCAGATGCACATATTTTATGTTGGCATATAGGTGTTTGTCAAGGGCGTTTGCGGATGTGCCCGTTTTTCTTTTATTGTTCTGCTCGTTATCCTATAACTATTTGGGAGATGAAAGAAAACCAAGTGGATGGCAAACCAGAATGGTGTTTACTTCATCACATATCTTCTCTGTCAGAGATGGTTGCAAAACAACCTTTCATCAGTTTAAGTTTTGAAATCGTAGGTTTCCACCCTGTTCATGGGGATATAGTGTACTTACAAAATAACGATATATATAGTGAGCCAAGATACATAGTCACGTGCAATGTTCGTGAAAGAACATTAGAGATAGCTACAAAAATTCCATTTGAGAATAGTCCTGGATACGCTTGGGCCCCTGAGCAGATTTGCCACAATGTGATCCCATGGTGGCCAACACCAATTCCAACAAGACTACACTATCACGAGGAGTGCCTAAATAATATCACTGTGATTAGTGTAGACACCTTTACTATTAAGGTAGGTTGCTTAAGTACTGTTAAGCAATTGAAACAAAAACTTGAAGAGAAGAAAGGGCCTGGGCAGTATGAACTACATTTTGATGGGCGAGTTTTAGAAGATGATGACAAATGGCTTGCGGATTATGGAATCAAGGACAAATCAAATATTTACATTGGCAAACATTGTTCGAAAGAGTGGCTTATGTCAGAGTCTTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

537

Amino Acids

62.23

Weight (kDa)

6.98

Isoelectric Point (pI)

46.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 21 - 61 3e-08 F-box domain
F-box-like PF12937 21 - 64 4e-07 F-box-like
b-prop_At3g26010-like PF24750 129 - 416 4.9e-15 F-box protein At3g26010-like, beta-propeller
ubiquitin PF00240 460 - 520 4.3e-09 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 423
AccB7I CCANNNNNTGG 2 cut(s) 153, 498
AccI GTMKAC 2 cut(s) 103, 1392
AciI CCGC 4 cut(s) 28, 190, 964, 1529
AclWI GGATC 5 cut(s) 167, 566, 845, 858, 1306
AcoI YGGCCR 1 cut(s) 1322
AcsI RAATTY 1 cut(s) 1251
AcvI CACGTG 1 cut(s) 1212
AdeI CACNNNGTG 1 cut(s) 1309
AfaI GTAC 2 cut(s) 1166, 1426
AfeI AGCGCT 1 cut(s) 616
AfiI CCNNNNNNNGG 5 cut(s) 85, 153, 498, 642, 1151
AflII CTTAAG 1 cut(s) 1420
AgsI TTSAA 5 cut(s) 371, 859, 1127, 1441, 1454
AhlI ACTAGT 1 cut(s) 602
AjnI CCWGG 2 cut(s) 1270, 1468
AjuI GAANNNNNNNTTGG 2 cut(s) 799, 831
AluBI AGCT 4 cut(s) 139, 403, 811, 1244
AluI AGCT 4 cut(s) 139, 403, 811, 1244
Alw21I GWGCWC 1 cut(s) 443
Alw26I GTCTC 1 cut(s) 707
AlwI GGATC 5 cut(s) 167, 566, 845, 858, 1306
Aor51HI AGCGCT 1 cut(s) 616
AoxI GGCC 4 cut(s) 373, 1284, 1322, 1466
ApaI GGGCCC 1 cut(s) 1288
ApoI RAATTY 1 cut(s) 1251
AseI ATTAAT 1 cut(s) 63
Asp700I GAANNNNTTC 1 cut(s) 501
AspLEI GCGC 2 cut(s) 159, 617
AspS9I GGNCC 3 cut(s) 1284, 1285, 1466
AsuHPI GGTGA 2 cut(s) 283, 731
AsuII TTCGAA 1 cut(s) 1580
BaeGI GKGCMC 2 cut(s) 974, 1288
BalI TGGCCA 1 cut(s) 1324
BamHI GGATCC 1 cut(s) 850
BanII GRGCYC 1 cut(s) 1288
BauI CACGAG 2 cut(s) 140, 1355
BbrPI CACGTG 1 cut(s) 1212
BbsI GAAGAC 2 cut(s) 500, 600
Bbv12I GWGCWC 1 cut(s) 443
BccI CCATC 5 cut(s) 55, 745, 1034, 1084, 1487
BciT130I CCWGG 2 cut(s) 1272, 1470
BciVI GTATCC 2 cut(s) 744, 1268
BclI TGATCA 2 cut(s) 15, 211
BcoDI GTCTC 1 cut(s) 707
BcuI ACTAGT 1 cut(s) 602
BfaI CTAG 2 cut(s) 603, 1609
BfmI CTRYAG 1 cut(s) 259
BfoI RGCGCY 1 cut(s) 618
BfrI CTTAAG 1 cut(s) 1420
BfuI GTATCC 2 cut(s) 744, 1268
BisI GCNGC 1 cut(s) 28
BlsI GCNGC 1 cut(s) 29
BmcAI AGTACT 1 cut(s) 1426
Bme1390I CCNGG 2 cut(s) 1272, 1470
BmgT120I GGNCC 3 cut(s) 1284, 1285, 1466
BmiI GGNNCC 3 cut(s) 852, 1286, 1287
BmrFI CCNGG 2 cut(s) 1272, 1470
BmsI GCATC 4 cut(s) 122, 210, 892, 907
BoxI GACNNNNGTC 1 cut(s) 284
BpiI GAAGAC 2 cut(s) 500, 600
Bpu10I CCTNAGC 1 cut(s) 1290
Bpu14I TTCGAA 1 cut(s) 1580
BsaAI YACGTR 1 cut(s) 1212
BsaJI CCNNGG 4 cut(s) 492, 829, 1316, 1469
Bsc4I CCNNNNNNNGG 5 cut(s) 85, 153, 498, 642, 1151
Bse1I ACTGG 1 cut(s) 721
Bse3DI GCAATG 2 cut(s) 808, 1222
BseBI CCWGG 2 cut(s) 1272, 1470
BseDI CCNNGG 4 cut(s) 492, 829, 1316, 1469
BseGI GGATG 4 cut(s) 201, 299, 972, 1045
BseLI CCNNNNNNNGG 5 cut(s) 85, 153, 498, 642, 1151
BseMI GCAATG 2 cut(s) 808, 1222
BseMII CTCAG 1 cut(s) 1281
BseNI ACTGG 1 cut(s) 721
BseRI GAGGAG 6 cut(s) 155, 300, 303, 306, 309, 1373
BseSI GKGCMC 2 cut(s) 974, 1288
BsgI GTGCAG 1 cut(s) 667
BshFI GGCC 4 cut(s) 375, 1286, 1324, 1468
BsiHKAI GWGCWC 1 cut(s) 443
BslFI GGGAC 1 cut(s) 430
BslI CCNNNNNNNGG 5 cut(s) 85, 153, 498, 642, 1151
BsmAI GTCTC 1 cut(s) 707
BsmFI GGGAC 1 cut(s) 430
BsnI GGCC 4 cut(s) 375, 1286, 1324, 1468
Bsp119I TTCGAA 1 cut(s) 1580
Bsp120I GGGCCC 1 cut(s) 1284
Bsp1286I GDGCHC 3 cut(s) 443, 974, 1288
Bsp143I GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
Bsp19I CCATGG 1 cut(s) 1316
BspACI CCGC 4 cut(s) 28, 190, 964, 1529
BspANI GGCC 4 cut(s) 375, 1286, 1324, 1468
BspCNI CTCAG 1 cut(s) 1282
BspLI GGNNCC 3 cut(s) 852, 1286, 1287
BspPI GGATC 5 cut(s) 167, 566, 845, 858, 1306
BspT104I TTCGAA 1 cut(s) 1580
BspTI CTTAAG 1 cut(s) 1420
BsrDI GCAATG 2 cut(s) 808, 1222
BsrI ACTGG 1 cut(s) 721
BssECI CCNNGG 4 cut(s) 492, 829, 1316, 1469
BssMI GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
BssSI CACGAG 2 cut(s) 140, 1355
BssT1I CCWWGG 2 cut(s) 492, 1316
Bst2BI CACGAG 2 cut(s) 140, 1355
Bst2UI CCWGG 2 cut(s) 1272, 1470
Bst4CI ACNGT 2 cut(s) 1381, 1429
Bst6I CTCTTC 1 cut(s) 1449
BstAFI CTTAAG 1 cut(s) 1420
BstBAI YACGTR 1 cut(s) 1212
BstBI TTCGAA 1 cut(s) 1580
BstC8I GCNNGC 6 cut(s) 137, 334, 443, 799, 871, 1527
BstDEI CTNAG 2 cut(s) 744, 1290
BstDSI CCRYGG 1 cut(s) 1316
BstF5I GGATG 4 cut(s) 201, 299, 972, 1045
BstH2I RGCGCY 1 cut(s) 618
BstHHI GCGC 2 cut(s) 159, 617
BstKTI GATC 6 cut(s) 18, 175, 214, 574, 853, 1314
BstMAI GTCTC 1 cut(s) 707
BstMBI GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
BstMWI GCNNNNNNNGC 5 cut(s) 198, 342, 554, 798, 817
BstNI CCWGG 2 cut(s) 1272, 1470
BstPAI GACNNNNGTC 1 cut(s) 284
BstSCI CCNGG 2 cut(s) 1270, 1468
BstSFI CTRYAG 1 cut(s) 259
BstSLI GKGCMC 2 cut(s) 974, 1288
BstV2I GAAGAC 2 cut(s) 500, 600
BstX2I RGATCY 1 cut(s) 850
BstXI CCANNNNNNTGG 1 cut(s) 1040
BstYI RGATCY 1 cut(s) 850
BsuI GTATCC 2 cut(s) 744, 1268
BsuRI GGCC 4 cut(s) 375, 1286, 1324, 1468
BtgI CCRYGG 1 cut(s) 1316
BtgZI GCGATG 1 cut(s) 888
BtsCI GGATG 4 cut(s) 201, 299, 972, 1045
BtsIMutI CAGTG 2 cut(s) 788, 1377
Cac8I GCNNGC 6 cut(s) 137, 334, 443, 799, 871, 1527
CfoI GCGC 2 cut(s) 159, 617
Cfr13I GGNCC 3 cut(s) 1284, 1285, 1466
Csp6I GTAC 2 cut(s) 1165, 1425
CviAII CATG 7 cut(s) 13, 31, 209, 295, 377, 1151, 1317
CviQI GTAC 2 cut(s) 1165, 1425
DdeI CTNAG 2 cut(s) 744, 1290
DpnI GATC 6 cut(s) 17, 174, 213, 573, 852, 1313
DpnII GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
DraIII CACNNNGTG 1 cut(s) 1309
EaeI YGGCCR 1 cut(s) 1322
Eam1104I CTCTTC 1 cut(s) 1449
EarI CTCTTC 1 cut(s) 1449
Eco130I CCWWGG 2 cut(s) 492, 1316
Eco24I GRGCYC 1 cut(s) 1288
Eco47III AGCGCT 1 cut(s) 616
Eco72I CACGTG 1 cut(s) 1212
EcoO109I RGGNCCY 2 cut(s) 1285, 1466
EcoRII CCWGG 2 cut(s) 1270, 1468
EcoT14I CCWWGG 2 cut(s) 492, 1316
EcoT22I ATGCAT 1 cut(s) 203
EcoT38I GRGCYC 1 cut(s) 1288
ErhI CCWWGG 2 cut(s) 492, 1316
FaeI CATG 7 cut(s) 16, 34, 212, 298, 380, 1154, 1320
FalI AAGNNNNNCTT 4 cut(s) 781, 813, 1575, 1607
FaqI GGGAC 1 cut(s) 430
FatI CATG 7 cut(s) 12, 30, 208, 294, 376, 1150, 1316
FauNDI CATATG 1 cut(s) 476
FbaI TGATCA 2 cut(s) 15, 211
FblI GTMKAC 2 cut(s) 103, 1392
Fnu4HI GCNGC 1 cut(s) 28
FokI GGATG 4 cut(s) 188, 286, 979, 1052
FriOI GRGCYC 1 cut(s) 1288
Fsp4HI GCNGC 1 cut(s) 28
FspBI CTAG 2 cut(s) 603, 1609
GlaI GCGC 2 cut(s) 158, 616
GluI GCNGC 1 cut(s) 28
HaeII RGCGCY 1 cut(s) 618
HaeIII GGCC 4 cut(s) 375, 1286, 1324, 1468
HhaI GCGC 2 cut(s) 159, 617
Hin1II CATG 7 cut(s) 16, 34, 212, 298, 380, 1154, 1320
Hin6I GCGC 2 cut(s) 157, 615
HinP1I GCGC 2 cut(s) 157, 615
HincII GTYRAC 2 cut(s) 104, 187
HindII GTYRAC 2 cut(s) 104, 187
HinfI GANTC 6 cut(s) 105, 253, 502, 561, 1539, 1601
HpaI GTTAAC 1 cut(s) 187
HphI GGTGA 2 cut(s) 283, 731
Hpy166II GTNNAC 5 cut(s) 104, 187, 1061, 1165, 1393
Hpy188I TCNGA 7 cut(s) 172, 231, 304, 538, 712, 1087, 1600
Hpy188III TCNNGA 2 cut(s) 1223, 1355
Hpy8I GTNNAC 5 cut(s) 104, 187, 1061, 1165, 1393
HpyAV CCTTC 1 cut(s) 385
HpyCH4III ACNGT 2 cut(s) 1381, 1429
HpyCH4IV ACGT 2 cut(s) 463, 1211
HpyF10VI GCNNNNNNNGC 5 cut(s) 198, 342, 554, 798, 817
HpyF3I CTNAG 2 cut(s) 744, 1290
HpySE526I ACGT 2 cut(s) 463, 1211
Hsp92II CATG 7 cut(s) 16, 34, 212, 298, 380, 1154, 1320
HspAI GCGC 2 cut(s) 157, 615
Ksp22I TGATCA 2 cut(s) 15, 211
KspAI GTTAAC 1 cut(s) 187
Kzo9I GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
LweI GCATC 4 cut(s) 122, 210, 892, 907
MaeI CTAG 2 cut(s) 603, 1609
MaeII ACGT 2 cut(s) 463, 1211
MaeIII GTNAC 3 cut(s) 241, 409, 1207
MalI GATC 6 cut(s) 17, 174, 213, 573, 852, 1313
MboI GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
MboII GAAGA 7 cut(s) 500, 605, 699, 1068, 1466, 1471, 1520
MfeI CAATTG 1 cut(s) 1436
MflI RGATCY 1 cut(s) 850
MhlI GDGCHC 3 cut(s) 443, 974, 1288
MlsI TGGCCA 1 cut(s) 1324
MluCI AATT 4 cut(s) 481, 1251, 1332, 1436
MluNI TGGCCA 1 cut(s) 1324
MlyI GAGTC 2 cut(s) 99, 1610
MmeI TCCRAC 3 cut(s) 229, 828, 1361
Mox20I TGGCCA 1 cut(s) 1324
Mph1103I ATGCAT 1 cut(s) 203
MroXI GAANNNNTTC 1 cut(s) 501
MscI TGGCCA 1 cut(s) 1324
MseI TTAA 8 cut(s) 63, 186, 588, 630, 1118, 1407, 1421, 1431
MslI CAYNNNNRTG 3 cut(s) 381, 942, 1491
Msp20I TGGCCA 1 cut(s) 1324
MspCI CTTAAG 1 cut(s) 1420
MspR9I CCNGG 2 cut(s) 1272, 1470
MunI CAATTG 1 cut(s) 1436
MvaI CCWGG 2 cut(s) 1272, 1470
MwoI GCNNNNNNNGC 5 cut(s) 198, 342, 554, 798, 817
NcoI CCATGG 1 cut(s) 1316
NdeI CATATG 1 cut(s) 476
NdeII GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
NlaIII CATG 7 cut(s) 16, 34, 212, 298, 380, 1154, 1320
NlaIV GGNNCC 3 cut(s) 852, 1286, 1287
NmeAIII GCCGAG 2 cut(s) 412, 661
NmuCI GTSAC 2 cut(s) 409, 1207
NsiI ATGCAT 1 cut(s) 203
NspV TTCGAA 1 cut(s) 1580
PdmI GAANNNNTTC 1 cut(s) 501
PfeI GAWTC 4 cut(s) 253, 502, 561, 1539
PflFI GACNNNGTC 1 cut(s) 431
PflMI CCANNNNNTGG 2 cut(s) 153, 498
PfoI TCCNGGA 1 cut(s) 1270
PkrI GCNGC 1 cut(s) 29
PleI GAGTC 2 cut(s) 99, 1609
PmaCI CACGTG 1 cut(s) 1212
PmlI CACGTG 1 cut(s) 1212
PpsI GAGTC 2 cut(s) 99, 1609
Ppu21I YACGTR 1 cut(s) 1212
PshAI GACNNNNGTC 1 cut(s) 284
PshBI ATTAAT 1 cut(s) 63
PsiI TTATAA 1 cut(s) 423
Psp6I CCWGG 2 cut(s) 1270, 1468
PspCI CACGTG 1 cut(s) 1212
PspGI CCWGG 2 cut(s) 1270, 1468
PspN4I GGNNCC 3 cut(s) 852, 1286, 1287
PspOMI GGGCCC 1 cut(s) 1284
PspPI GGNCC 3 cut(s) 1284, 1285, 1466
PsuI RGATCY 1 cut(s) 850
PsyI GACNNNGTC 1 cut(s) 431
RsaI GTAC 2 cut(s) 1166, 1426
RsaNI GTAC 2 cut(s) 1165, 1425
RseI CAYNNNNRTG 3 cut(s) 381, 942, 1491
SalI GTCGAC 1 cut(s) 102
SaqAI TTAA 8 cut(s) 63, 186, 588, 630, 1118, 1407, 1421, 1431
SatI GCNGC 1 cut(s) 28
Sau3AI GATC 6 cut(s) 15, 172, 211, 571, 850, 1311
Sau96I GGNCC 3 cut(s) 1284, 1285, 1466
ScaI AGTACT 1 cut(s) 1426
SchI GAGTC 2 cut(s) 99, 1610
ScrFI CCNGG 2 cut(s) 1272, 1470
SduI GDGCHC 3 cut(s) 443, 974, 1288
SfaNI GCATC 4 cut(s) 122, 210, 892, 907
SfcI CTRYAG 1 cut(s) 259
SfuI TTCGAA 1 cut(s) 1580
SmiMI CAYNNNNRTG 3 cut(s) 381, 942, 1491
SmlI CTYRAG 1 cut(s) 1420
SmoI CTYRAG 1 cut(s) 1420
SpeI ACTAGT 1 cut(s) 602
Sse9I AATT 4 cut(s) 481, 1251, 1332, 1436
SsiI CCGC 4 cut(s) 28, 190, 964, 1529
SspI AATATT 3 cut(s) 586, 862, 1558
SspMI CTAG 2 cut(s) 603, 1609
StyD4I CCNGG 2 cut(s) 1270, 1468
StyI CCWWGG 2 cut(s) 492, 1316
TaaI ACNGT 2 cut(s) 1381, 1429
TaiI ACGT 2 cut(s) 466, 1214
TaqI TCGA 4 cut(s) 90, 103, 130, 1580
TaqII GACCGA 1 cut(s) 843
TasI AATT 4 cut(s) 481, 1251, 1332, 1436
TatI WGTACW 2 cut(s) 1164, 1424
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 4 cut(s) 253, 502, 561, 1539
Tru1I TTAA 8 cut(s) 63, 186, 588, 630, 1118, 1407, 1421, 1431
Tru9I TTAA 8 cut(s) 63, 186, 588, 630, 1118, 1407, 1421, 1431
TscAI CASTG 2 cut(s) 788, 1384
TseFI GTSAC 2 cut(s) 409, 1207
Tsp45I GTSAC 2 cut(s) 409, 1207
TspDTI ATGAA 8 cut(s) 393, 553, 886, 1037, 1055, 1099, 1139, 1494
TspGWI ACGGA 1 cut(s) 843
TspRI CASTG 2 cut(s) 788, 1384
Tth111I GACNNNGTC 1 cut(s) 431
Van91I CCANNNNNTGG 2 cut(s) 153, 498
Vha464I CTTAAG 1 cut(s) 1420
VspI ATTAAT 1 cut(s) 63
XapI RAATTY 1 cut(s) 1251
XcmI CCANNNNNNNNNTGG 1 cut(s) 1148
XmiI GTMKAC 2 cut(s) 103, 1392
XmnI GAANNNNTTC 1 cut(s) 501
XspI CTAG 2 cut(s) 603, 1609
ZrmI AGTACT 1 cut(s) 1426
Zsp2I ATGCAT 1 cut(s) 203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.