Rmu_sc0008007.1_g000002

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008007.1
OG0000270
Physical Location & Seq
Reverse (-)
11590 .. 13047
1458 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008007.1_g000002.1.cds

Sequence Viewer

Length: 1458 bp
atgggaagacattgtggtactaatgctacaaaaagattacttaacgtgccatctgggtctcagtcccacgtaaaaaaatcaaaatcatcaccggaaacaccatggcaaagcaagttgaagactagtattgatcatctccctgacatgttattagttgaaatcctttgtcggcttcctcacaataaatttgtcttccaatgcaagtgcgtgtgcaaacggtggtcttctctcatctctcatgaaaagtttcagtgccgttttctatggctccaaagtcgtcaggaccaaaagccaacgccggtgggacgtactatcatcttcagggatgccaaggacatgaggaagttttttatattgccggagctcgagcttccgatgttcaaaacacacaacttctctttgagtttcctccgctgttttgaacctccagagttcatagaaacagatgatgatattgatgatgggccaattgtggtcgggacgtgcaatgacttggttttgtgctgcgaaaccacaacttttcaaagttgttactacatttgcaatccatgcaccaagcaatttgttcatcttccgcccacccctcgacgctacaaggaagtaagagtgggattcatctgtgatccctattataaggaagatggtgatgatcagaaagaagaaagtgatatcatccaggttgatgctgatttcaggtacgctgttgtgcgaataggtccttgctcatccccatttaaattcaaccttgagatcttctcttcagaaacaggtaaatggacagaatcgactataatgagcacatgtaactttcgtttggacaatctgaatcgcagcggaggcgttccttataatggaatgttatattggttgaatgctgattatcaagatgccttcattgttgggttggatccctactattactcgaacaaaaacaacaatgatgaatgtcctggttttcattttattgaattgccagaaaggtatggacaatttcccttcttagctgtctgcggaggaggacgtctgcgaatttgccatttctttactaatcaattacgtgtcccgattcccttctctcatgaaactattgacgtccctatgccgtgtatgagtgtgtgggaattgaaagatgatgttgatgacgatgtaaatgattggtataacttgacaggcatcattgacctgagcacaatggttttcggaaatccattaactcgcgaatggggattctactcgaagacccctttgcttgactcaatcatggtgctggctttcgatccaaataatgaagatatactttatctagaattgtttgaccacattgtagcatgcaatatttctgaaagagcgataaagggaactacattaaccattccatatagaagtacggttcgttttgggagaggcgtcttcccatttgtgatcccaaagtggccaacaccccctcccagactatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

485

Amino Acids

56.07

Weight (kDa)

5.82

Isoelectric Point (pI)

49.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 633, 849
AatII GACGTC 2 cut(s) 1024, 1095
AccII CGCG 1 cut(s) 1218
AciI CCGC 4 cut(s) 412, 575, 834, 1011
AclWI GGATC 5 cut(s) 617, 902, 915, 1271, 1417
AcoI YGGCCR 1 cut(s) 1433
AcsI RAATTY 3 cut(s) 185, 737, 1029
AcuI CTGAAG 2 cut(s) 304, 744
AcyI GRCGYC 3 cut(s) 1021, 1092, 1407
AfaI GTAC 4 cut(s) 19, 310, 698, 1387
AfiI CCNNNNNNNGG 1 cut(s) 851
AflIII ACRYGT 3 cut(s) 144, 800, 1057
AgsI TTSAA 9 cut(s) 118, 158, 382, 422, 524, 742, 871, 968, 1126
AhlI ACTAGT 1 cut(s) 122
AjiI CACGTC 1 cut(s) 483
AjnI CCWGG 2 cut(s) 675, 949
AjuI GAANNNNNNNTTGG 2 cut(s) 847, 879
AluBI AGCT 3 cut(s) 364, 370, 1004
AluI AGCT 3 cut(s) 364, 370, 1004
Alw21I GWGCWC 3 cut(s) 366, 800, 1190
Alw26I GTCTC 1 cut(s) 63
AlwI GGATC 5 cut(s) 617, 902, 915, 1271, 1417
Ama87I CYCGRG 1 cut(s) 365
AoxI GGCC 2 cut(s) 464, 1433
ApeKI GCWGC 2 cut(s) 504, 831
ApoI RAATTY 3 cut(s) 185, 737, 1029
Asp700I GAANNNNTTC 1 cut(s) 246
AspS9I GGNCC 3 cut(s) 283, 464, 716
AsuHPI GGTGA 2 cut(s) 81, 656
AvaI CYCGRG 1 cut(s) 365
AvaII GGWCC 2 cut(s) 283, 716
BalI TGGCCA 1 cut(s) 1435
BamHI GGATCC 1 cut(s) 907
BanII GRGCYC 1 cut(s) 366
BbsI GAAGAC 6 cut(s) 13, 125, 184, 216, 1244, 1402
Bbv12I GWGCWC 3 cut(s) 366, 800, 1190
BbvI GCAGC 2 cut(s) 491, 843
BccI CCATC 3 cut(s) 58, 455, 635
BceAI ACGGC 2 cut(s) 240, 1087
BciT130I CCWGG 2 cut(s) 677, 951
BclI TGATCA 2 cut(s) 130, 649
BcoDI GTCTC 1 cut(s) 63
BcuI ACTAGT 1 cut(s) 122
BfaI CTAG 2 cut(s) 123, 1304
BglII AGATCT 1 cut(s) 750
BisI GCNGC 2 cut(s) 505, 832
BlsI GCNGC 2 cut(s) 506, 833
Bme1390I CCNGG 2 cut(s) 677, 951
Bme18I GGWCC 2 cut(s) 283, 716
BmeT110I CYCGRG 1 cut(s) 365
BmgBI CACGTC 1 cut(s) 483
BmgT120I GGNCC 3 cut(s) 283, 464, 716
BmiI GGNNCC 2 cut(s) 269, 909
BmrFI CCNGG 2 cut(s) 677, 951
BmsI GCATC 4 cut(s) 316, 673, 877, 1182
BpiI GAAGAC 6 cut(s) 13, 125, 184, 216, 1244, 1402
BplI GAGNNNNNCTC 2 cut(s) 740, 772
BpmI CTGGAG 1 cut(s) 411
Bpu10I CCTNAGC 1 cut(s) 1184
BpuEI CTTGAG 1 cut(s) 767
BsaAI YACGTR 2 cut(s) 70, 1058
BsaHI GRCGYC 3 cut(s) 1021, 1092, 1407
BsaI GGTCTC 1 cut(s) 63
BsaJI CCNNGG 2 cut(s) 101, 330
BsaWI WCCGGW 1 cut(s) 91
BsaXI ACNNNNNCTCC 1 cut(s) 1429
Bsc4I CCNNNNNNNGG 1 cut(s) 851
Bse118I RCCGGY 1 cut(s) 298
Bse3DI GCAATG 1 cut(s) 493
BseBI CCWGG 2 cut(s) 677, 951
BseDI CCNNGG 2 cut(s) 101, 330
BseGI GGATG 3 cut(s) 331, 672, 725
BseLI CCNNNNNNNGG 1 cut(s) 851
BseMI GCAATG 1 cut(s) 493
BseMII CTCAG 2 cut(s) 74, 1175
BseRI GAGGAG 1 cut(s) 1029
BseXI GCAGC 2 cut(s) 491, 843
Bsh1236I CGCG 1 cut(s) 1218
BshFI GGCC 2 cut(s) 466, 1435
BsiHKAI GWGCWC 3 cut(s) 366, 800, 1190
BsiHKCI CYCGRG 1 cut(s) 365
BsiSI CCGG 3 cut(s) 92, 299, 359
BslFI GGGAC 5 cut(s) 49, 318, 493, 1046, 1079
BslI CCNNNNNNNGG 1 cut(s) 851
BsmAI GTCTC 1 cut(s) 63
BsmFI GGGAC 5 cut(s) 49, 318, 493, 1046, 1079
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 2 cut(s) 466, 1435
Bso31I GGTCTC 1 cut(s) 63
BsoBI CYCGRG 1 cut(s) 365
Bsp1286I GDGCHC 3 cut(s) 366, 800, 1190
Bsp143I GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
Bsp19I CCATGG 1 cut(s) 101
Bsp68I TCGCGA 1 cut(s) 1218
BspACI CCGC 4 cut(s) 412, 575, 834, 1011
BspANI GGCC 2 cut(s) 466, 1435
BspCNI CTCAG 2 cut(s) 73, 1176
BspFNI CGCG 1 cut(s) 1218
BspHI TCATGA 2 cut(s) 238, 1078
BspLI GGNNCC 2 cut(s) 269, 909
BspPI GGATC 5 cut(s) 617, 902, 915, 1271, 1417
BspTNI GGTCTC 1 cut(s) 63
BsrDI GCAATG 1 cut(s) 493
BsrFI RCCGGY 1 cut(s) 298
BssAI RCCGGY 1 cut(s) 298
BssECI CCNNGG 2 cut(s) 101, 330
BssMI GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
BssNI GRCGYC 3 cut(s) 1021, 1092, 1407
BssT1I CCWWGG 2 cut(s) 101, 330
Bst2UI CCWGG 2 cut(s) 677, 951
Bst4CI ACNGT 2 cut(s) 219, 1390
Bst6I CTCTTC 1 cut(s) 763
BstACI GRCGYC 3 cut(s) 1021, 1092, 1407
BstAPI GCANNNNNTGC 1 cut(s) 549
BstBAI YACGTR 2 cut(s) 70, 1058
BstC8I GCNNGC 2 cut(s) 1269, 1330
BstDEI CTNAG 3 cut(s) 60, 1000, 1184
BstDSI CCRYGG 1 cut(s) 101
BstF5I GGATG 3 cut(s) 331, 672, 725
BstFNI CGCG 1 cut(s) 1218
BstKTI GATC 7 cut(s) 133, 625, 652, 753, 910, 1279, 1425
BstMAI GTCTC 1 cut(s) 63
BstMBI GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
BstMWI GCNNNNNNNGC 2 cut(s) 549, 837
BstNI CCWGG 2 cut(s) 677, 951
BstNSI RCATGY 3 cut(s) 148, 804, 1332
BstSCI CCNGG 2 cut(s) 675, 949
BstUI CGCG 1 cut(s) 1218
BstV1I GCAGC 2 cut(s) 491, 843
BstV2I GAAGAC 6 cut(s) 13, 125, 184, 216, 1244, 1402
BstX2I RGATCY 2 cut(s) 750, 907
BstYI RGATCY 2 cut(s) 750, 907
BsuRI GGCC 2 cut(s) 466, 1435
BtgI CCRYGG 1 cut(s) 101
BtrI CACGTC 1 cut(s) 483
BtsCI GGATG 3 cut(s) 331, 672, 725
BtsIMutI CAGTG 1 cut(s) 257
BtuMI TCGCGA 1 cut(s) 1218
Cac8I GCNNGC 2 cut(s) 1269, 1330
CciI TCATGA 2 cut(s) 238, 1078
Cfr10I RCCGGY 1 cut(s) 298
Cfr13I GGNCC 3 cut(s) 283, 464, 716
CseI GACGC 2 cut(s) 597, 1396
Csp6I GTAC 4 cut(s) 18, 309, 697, 1386
CspCI CAANNNNNGTGG 2 cut(s) 282, 317
CviAII CATG 9 cut(s) 102, 145, 239, 337, 549, 801, 1079, 1261, 1329
CviJI RGCY 9 cut(s) 172, 268, 292, 364, 370, 466, 1004, 1271, 1435
CviKI_1 RGCY 9 cut(s) 172, 268, 292, 364, 370, 466, 1004, 1271, 1435
CviQI GTAC 4 cut(s) 18, 309, 697, 1386
DdeI CTNAG 3 cut(s) 60, 1000, 1184
DpnI GATC 7 cut(s) 132, 624, 651, 752, 909, 1278, 1424
DpnII GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
DraI TTTAAA 1 cut(s) 736
EaeI YGGCCR 1 cut(s) 1433
Eam1104I CTCTTC 1 cut(s) 763
EarI CTCTTC 1 cut(s) 763
EciI GGCGGA 1 cut(s) 564
Ecl136II GAGCTC 1 cut(s) 364
Eco130I CCWWGG 2 cut(s) 101, 330
Eco24I GRGCYC 1 cut(s) 366
Eco31I GGTCTC 1 cut(s) 63
Eco32I GATATC 1 cut(s) 670
Eco47I GGWCC 2 cut(s) 283, 716
Eco53kI GAGCTC 1 cut(s) 364
Eco57I CTGAAG 2 cut(s) 304, 744
Eco88I CYCGRG 1 cut(s) 365
EcoICRI GAGCTC 1 cut(s) 364
EcoO109I RGGNCCY 1 cut(s) 716
EcoRII CCWGG 2 cut(s) 675, 949
EcoRV GATATC 1 cut(s) 670
EcoT14I CCWWGG 2 cut(s) 101, 330
EcoT38I GRGCYC 1 cut(s) 366
ErhI CCWWGG 2 cut(s) 101, 330
FaeI CATG 9 cut(s) 105, 148, 242, 340, 552, 804, 1082, 1264, 1332
FalI AAGNNNNNCTT 2 cut(s) 1281, 1313
FaqI GGGAC 5 cut(s) 49, 318, 493, 1046, 1079
FatI CATG 9 cut(s) 101, 144, 238, 336, 548, 800, 1078, 1260, 1328
FbaI TGATCA 2 cut(s) 130, 649
Fnu4HI GCNGC 2 cut(s) 505, 832
FokI GGATG 3 cut(s) 338, 659, 712
FriOI GRGCYC 1 cut(s) 366
Fsp4HI GCNGC 2 cut(s) 505, 832
FspBI CTAG 2 cut(s) 123, 1304
GluI GCNGC 2 cut(s) 505, 832
GsuI CTGGAG 1 cut(s) 411
HaeIII GGCC 2 cut(s) 466, 1435
HapII CCGG 3 cut(s) 92, 299, 359
HgaI GACGC 2 cut(s) 597, 1396
Hin1I GRCGYC 3 cut(s) 1021, 1092, 1407
Hin1II CATG 9 cut(s) 105, 148, 242, 340, 552, 804, 1082, 1264, 1332
HinfI GANTC 6 cut(s) 612, 782, 826, 1066, 1227, 1253
HpaII CCGG 3 cut(s) 92, 299, 359
HphI GGTGA 2 cut(s) 81, 656
Hpy188I TCNGA 6 cut(s) 375, 654, 763, 825, 1202, 1342
Hpy188III TCNNGA 9 cut(s) 239, 281, 428, 478, 884, 1063, 1079, 1217, 1304
Hpy99I CGWCG 1 cut(s) 591
HpyAV CCTTC 3 cut(s) 901, 1006, 1081
HpyCH4III ACNGT 2 cut(s) 219, 1390
HpyCH4IV ACGT 7 cut(s) 45, 69, 307, 482, 1021, 1057, 1092
HpyCH4V TGCA 6 cut(s) 201, 213, 486, 543, 552, 1332
HpyF10VI GCNNNNNNNGC 2 cut(s) 549, 837
HpyF3I CTNAG 3 cut(s) 60, 1000, 1184
HpySE526I ACGT 7 cut(s) 45, 69, 307, 482, 1021, 1057, 1092
Hsp92I GRCGYC 3 cut(s) 1021, 1092, 1407
Hsp92II CATG 9 cut(s) 105, 148, 242, 340, 552, 804, 1082, 1264, 1332
Ksp22I TGATCA 2 cut(s) 130, 649
Kzo9I GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
LmnI GCTCC 2 cut(s) 273, 361
Lsp1109I GCAGC 2 cut(s) 491, 843
LweI GCATC 4 cut(s) 316, 673, 877, 1182
MaeI CTAG 2 cut(s) 123, 1304
MaeII ACGT 7 cut(s) 45, 69, 307, 482, 1021, 1057, 1092
MaeIII GTNAC 2 cut(s) 530, 803
MalI GATC 7 cut(s) 132, 624, 651, 752, 909, 1278, 1424
MboI GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
MfeI CAATTG 1 cut(s) 468
MflI RGATCY 2 cut(s) 750, 907
MhlI GDGCHC 3 cut(s) 366, 800, 1190
MlsI TGGCCA 1 cut(s) 1435
MluNI TGGCCA 1 cut(s) 1435
MlyI GAGTC 1 cut(s) 1247
MmeI TCCRAC 1 cut(s) 885
Mox20I TGGCCA 1 cut(s) 1435
MroXI GAANNNNTTC 1 cut(s) 246
MscI TGGCCA 1 cut(s) 1435
MseI TTAA 4 cut(s) 42, 735, 1211, 1367
Msp20I TGGCCA 1 cut(s) 1435
MspA1I CMGCKG 2 cut(s) 414, 834
MspI CCGG 3 cut(s) 92, 299, 359
MspR9I CCNGG 2 cut(s) 677, 951
MunI CAATTG 1 cut(s) 468
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 2 cut(s) 677, 951
MvnI CGCG 1 cut(s) 1218
MwoI GCNNNNNNNGC 2 cut(s) 549, 837
NcoI CCATGG 1 cut(s) 101
NdeII GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
NlaIII CATG 9 cut(s) 105, 148, 242, 340, 552, 804, 1082, 1264, 1332
NlaIV GGNNCC 2 cut(s) 269, 909
NruI TCGCGA 1 cut(s) 1218
NspI RCATGY 3 cut(s) 148, 804, 1332
PaeI GCATGC 1 cut(s) 1332
PaeR7I CTCGAG 1 cut(s) 365
PagI TCATGA 2 cut(s) 238, 1078
PciI ACATGT 2 cut(s) 144, 800
PctI GAATGC 1 cut(s) 877
PdmI GAANNNNTTC 1 cut(s) 246
PfeI GAWTC 5 cut(s) 612, 782, 826, 1066, 1227
PkrI GCNGC 2 cut(s) 506, 833
PleI GAGTC 1 cut(s) 1247
PpsI GAGTC 1 cut(s) 1247
Ppu21I YACGTR 2 cut(s) 70, 1058
PpuMI RGGWCCY 1 cut(s) 716
PscI ACATGT 2 cut(s) 144, 800
PsiI TTATAA 2 cut(s) 633, 849
Psp124BI GAGCTC 1 cut(s) 366
Psp5II RGGWCCY 1 cut(s) 716
Psp6I CCWGG 2 cut(s) 675, 949
PspGI CCWGG 2 cut(s) 675, 949
PspN4I GGNNCC 2 cut(s) 269, 909
PspPI GGNCC 3 cut(s) 283, 464, 716
PspPPI RGGWCCY 1 cut(s) 716
PspXI VCTCGAGB 1 cut(s) 365
PsuI RGATCY 2 cut(s) 750, 907
RruI TCGCGA 1 cut(s) 1218
RsaI GTAC 4 cut(s) 19, 310, 698, 1387
RsaNI GTAC 4 cut(s) 18, 309, 697, 1386
SacI GAGCTC 1 cut(s) 366
SaqAI TTAA 4 cut(s) 42, 735, 1211, 1367
SatI GCNGC 2 cut(s) 505, 832
Sau3AI GATC 7 cut(s) 130, 622, 649, 750, 907, 1276, 1422
Sau96I GGNCC 3 cut(s) 283, 464, 716
SchI GAGTC 1 cut(s) 1247
ScrFI CCNGG 2 cut(s) 677, 951
SduI GDGCHC 3 cut(s) 366, 800, 1190
SfaNI GCATC 4 cut(s) 316, 673, 877, 1182
Sfr274I CTCGAG 1 cut(s) 365
SgrAI CRCCGGYG 1 cut(s) 298
SinI GGWCC 2 cut(s) 283, 716
SlaI CTCGAG 1 cut(s) 365
SmiI ATTTAAAT 1 cut(s) 736
SmlI CTYRAG 2 cut(s) 365, 746
SmoI CTYRAG 2 cut(s) 365, 746
SpeI ACTAGT 1 cut(s) 122
SphI GCATGC 1 cut(s) 1332
SsiI CCGC 4 cut(s) 412, 575, 834, 1011
SspI AATATT 1 cut(s) 1336
SspMI CTAG 2 cut(s) 123, 1304
SstI GAGCTC 1 cut(s) 366
StyD4I CCNGG 2 cut(s) 675, 949
StyI CCWWGG 2 cut(s) 101, 330
SwaI ATTTAAAT 1 cut(s) 736
TaaI ACNGT 2 cut(s) 219, 1390
TaiI ACGT 7 cut(s) 48, 72, 310, 485, 1024, 1060, 1095
TaqI TCGA 6 cut(s) 366, 586, 785, 923, 1235, 1275
TfiI GAWTC 5 cut(s) 612, 782, 826, 1066, 1227
Tru1I TTAA 4 cut(s) 42, 735, 1211, 1367
Tru9I TTAA 4 cut(s) 42, 735, 1211, 1367
TscAI CASTG 1 cut(s) 257
TseI GCWGC 2 cut(s) 504, 831
TspDTI ATGAA 9 cut(s) 255, 424, 557, 604, 883, 947, 957, 1095, 1302
TspRI CASTG 1 cut(s) 257
VpaK11BI GGWCC 2 cut(s) 283, 716
XapI RAATTY 3 cut(s) 185, 737, 1029
XbaI TCTAGA 1 cut(s) 1303
XceI RCATGY 3 cut(s) 148, 804, 1332
XhoI CTCGAG 1 cut(s) 365
XmnI GAANNNNTTC 1 cut(s) 246
XspI CTAG 2 cut(s) 123, 1304
ZraI GACGTC 2 cut(s) 1022, 1093
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.