Prupe.4G053600_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000270
Physical Location & Seq
Forward (+)
2592306 .. 2593958
1653 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G053600.1

Sequence Viewer

Length: 1653 bp
ATGAGACCTTGTGATAAAAGTTCCCAATCTCTTGGAGCGCCCTCTCATGGTCGTGGTCCTGGTGGTCGCCATCATCAGTCCTCCTCAAAAAGATCAGCACCCGGAAAATCAATATCAAAATTAGTGACGAGTAATATTAATCTTGATGATCTCCCTGAATTTATATTACTGGAAATTCTATGTCGACTTCCTTCGGAATTTGCGGTTCAATGCATGTGTGTGTCCAAACGTTGGTTCAGTCTCATTTATAATTCTTATTTTTTTCGTCGTGTCCAAAGTGATAAACCCATTACACGCAGTGTCATTGTCCCGGATACACAGCATGCAAGGACGACATTCTTTTCTGTGTCGTCAGAGGAGCCTCCTCATGAGCTGGTGTTCAAAACACCACCACGTGAGTTCTCTCTGAGTTTCCTCCCTTGTTTCCAAGCTGATTGTGATTTTTTAAAAGGCGAGCCGTGTGTGGTAGGAACATATAATGACTTAATTTTGTGTTGTGCAACCACGCATTATCAATGTGATTACTACATCTGCAATCCACGCACCAAGCAATGGGAGGCTCTCCCTCGTCCGCCTCGACGCGGACGCCACAAGAGGGTAATGGTTGGATTCGTATGCGATCCCAACTACAAGTACAAGAATGATCGAAAGCAAGCAGAAGCAGAAAGATCTAGGAGGACTGTCAATATTCAGCTTAATAATAGTATTATTAATGTTGAGTACAGGTACAAGGTTGTGCGAATAATTGATGATCAATGGGAACGTCCCGAGCATTCCTCCCGTTTCTACATGGAGATCTTCTCTTCTGAGACTGGTAAATGGAGACAGTCACGTGTTTTCAGCCCGCGGAGGTTTTGTTTTACTAGATTGTCTCCCTACCCTGGGGTTGCTCATAATGGAAGCTTGTATTGGTTTACTGATACTGATCGCTTTATGGTTGGGTTGGATCCCTTCACTACTCGTGACCAGCTTTATATAAATGACACTAGTAACTATTGCTTTCGTTTCATTGATGAGCCTGAAGACGAATCTCGAACAATGCATTTCCTAGGTGAGTGTGGAAGAGGGTGTCTGCGGATGTGCATGTTGCCTCATTACTGTGATCTTAGTGGTATGAGTGTTTGGGAGTTCAAAGATGATGGTCGTGGTTATGTTGATGGTCAAGTCGACGGGCCTGGAAAATGGTGTTTGGTAGACAAAGTTCGCCTGTTCCAATTAGTCCCGGAAAATCCACTCCTCACTAAATGGGACCGTGAGTCCTCTACAAAAACGGTTATGGTGCTAGCTTTCGATCCAAATAATAAGGATGTGTTGTTACTACATTTGTTTGGTCGCATTGTCATGTACAACATCCGTGCAAAAACATTAAAAGAGACCACTTGGACCACTCCATTCACAACTCTCGTGCTCCGTTGCGCCGGGTTATCTGTCTTCCCAGCCTTTCCTTTTGTGCTCCCATGGTGGCCGACGCCGATAATTACTAGTAGGGGTAGGCGACAAAGATTCAGCCCTAATCGTTTAATTCCTCACACAGCGAAAGTGCAGCAACCTACACCAGTTTCATCAAAGAGGCCAAGGGAAAATGGACGAAAGGAGGCGGTTGCGACTGCCGCTTCTTCTTCTAGGCGGCCCAGTAAACGGTCTAGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like

Protein Analysis

551

Amino Acids

63.77

Weight (kDa)

9.49

Isoelectric Point (pI)

58.41

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 249
AccB7I CCANNNNNTGG 2 cut(s) 231, 552
AccI GTMKAC 3 cut(s) 184, 1167, 1194
AccII CGCG 2 cut(s) 582, 847
AciI CCGC 9 cut(s) 203, 572, 582, 845, 847, 1075, 1598, 1611, 1627
AclI AACGTT 1 cut(s) 229
AclWI GGATC 4 cut(s) 614, 941, 954, 1286
AcoI YGGCCR 1 cut(s) 1463
AcsI RAATTY 3 cut(s) 158, 174, 197
AcuI CTGAAG 1 cut(s) 1041
AcvI CACGTG 2 cut(s) 395, 833
AcyI GRCGYC 2 cut(s) 586, 1469
AdeI CACNNNGTG 2 cut(s) 299, 395
AfaI GTAC 4 cut(s) 635, 722, 728, 1346
AfiI CCNNNNNNNGG 8 cut(s) 47, 231, 552, 581, 595, 881, 882, 1638
AflIII ACRYGT 1 cut(s) 832
AgsI TTSAA 3 cut(s) 209, 382, 1132
AhdI GACNNNNNGTC 1 cut(s) 1255
AhlI ACTAGT 2 cut(s) 986, 1481
AjnI CCWGG 3 cut(s) 58, 880, 1174
AjuI GAANNNNNNNTTGG 4 cut(s) 218, 250, 892, 924
AluBI AGCT 6 cut(s) 373, 431, 694, 903, 970, 1286
AluI AGCT 6 cut(s) 373, 431, 694, 903, 970, 1286
Alw21I GWGCWC 2 cut(s) 1410, 1455
Alw26I GTCTC 5 cut(s) 245, 803, 817, 876, 1367
AlwI GGATC 4 cut(s) 614, 941, 954, 1286
Ama87I CYCGRG 1 cut(s) 767
AoxI GGCC 4 cut(s) 1172, 1463, 1571, 1628
ApeKI GCWGC 1 cut(s) 1543
ApoI RAATTY 3 cut(s) 158, 174, 197
AseI ATTAAT 2 cut(s) 138, 711
AspA2I CCTAGG 1 cut(s) 1048
AspLEI GCGC 2 cut(s) 40, 1418
AspS9I GGNCC 5 cut(s) 56, 1172, 1249, 1383, 1629
AsuC2I CCSGG 4 cut(s) 102, 311, 1223, 1420
AsuHPI GGTGA 1 cut(s) 1064
AsuNHI GCTAGC 1 cut(s) 1282
AvaI CYCGRG 1 cut(s) 767
AvaII GGWCC 3 cut(s) 56, 1249, 1383
AvrII CCTAGG 1 cut(s) 1048
BamHI GGATCC 1 cut(s) 946
BauI CACGAG 2 cut(s) 960, 1403
BbrPI CACGTG 2 cut(s) 395, 833
BbsI GAAGAC 2 cut(s) 1029, 1423
Bbv12I GWGCWC 2 cut(s) 1410, 1455
BbvI GCAGC 1 cut(s) 1555
BccI CCATC 3 cut(s) 78, 1133, 1151
BceAI ACGGC 1 cut(s) 442
BciT130I CCWGG 3 cut(s) 60, 882, 1176
BciVI GTATCC 1 cut(s) 307
BclI TGATCA 1 cut(s) 751
BcnI CCSGG 4 cut(s) 102, 311, 1223, 1420
BcoDI GTCTC 5 cut(s) 245, 803, 817, 876, 1367
BcuI ACTAGT 2 cut(s) 986, 1481
BfaI CTAG 8 cut(s) 672, 864, 987, 1049, 1283, 1482, 1623, 1644
BfoI RGCGCY 1 cut(s) 41
BfuI GTATCC 1 cut(s) 307
BglII AGATCT 2 cut(s) 668, 795
BisI GCNGC 3 cut(s) 1544, 1611, 1628
BlnI CCTAGG 1 cut(s) 1048
BlsI GCNGC 3 cut(s) 1545, 1612, 1629
Bme1390I CCNGG 7 cut(s) 60, 102, 311, 882, 1176, 1223, 1420
Bme18I GGWCC 3 cut(s) 56, 1249, 1383
BmeRI GACNNNNNGTC 1 cut(s) 1255
BmeT110I CYCGRG 1 cut(s) 767
BmgT120I GGNCC 5 cut(s) 56, 1172, 1249, 1383, 1629
BmiI GGNNCC 3 cut(s) 360, 948, 1250
BmrFI CCNGG 7 cut(s) 60, 102, 311, 882, 1176, 1223, 1420
BmrI ACTGGG 1 cut(s) 1626
BmtI GCTAGC 1 cut(s) 1286
BmuI ACTGGG 1 cut(s) 1626
BpiI GAAGAC 2 cut(s) 1029, 1423
BplI GAGNNNNNCTC 4 cut(s) 761, 793, 785, 817
BpuMI CCSGG 4 cut(s) 102, 311, 1223, 1420
BsaAI YACGTR 2 cut(s) 395, 833
BsaBI GATNNNNATC 1 cut(s) 924
BsaHI GRCGYC 2 cut(s) 586, 1469
BsaI GGTCTC 1 cut(s) 1367
BsaJI CCNNGG 6 cut(s) 845, 880, 881, 1048, 1457, 1574
BsaXI ACNNNNNCTCC 2 cut(s) 841, 871
Bsc4I CCNNNNNNNGG 8 cut(s) 47, 231, 552, 581, 595, 881, 882, 1638
Bse1I ACTGG 4 cut(s) 174, 817, 1556, 1632
Bse3DI GCAATG 1 cut(s) 557
Bse8I GATNNNNATC 1 cut(s) 924
BseBI CCWGG 3 cut(s) 60, 882, 1176
BseDI CCNNGG 6 cut(s) 845, 880, 881, 1048, 1457, 1574
BseGI GGATG 3 cut(s) 1083, 1312, 1350
BseJI GATNNNNATC 1 cut(s) 924
BseLI CCNNNNNNNGG 8 cut(s) 47, 231, 552, 581, 595, 881, 882, 1638
BseMI GCAATG 1 cut(s) 557
BseMII CTCAG 1 cut(s) 398
BseNI ACTGG 4 cut(s) 174, 817, 1556, 1632
BseRI GAGGAG 4 cut(s) 73, 354, 371, 1226
BseXI GCAGC 1 cut(s) 1555
BseYI CCCAGC 1 cut(s) 1435
BsgI GTGCAG 1 cut(s) 1562
Bsh1236I CGCG 2 cut(s) 582, 847
BshFI GGCC 4 cut(s) 1174, 1465, 1573, 1630
BsiHKAI GWGCWC 2 cut(s) 1410, 1455
BsiHKCI CYCGRG 1 cut(s) 767
BsiSI CCGG 4 cut(s) 102, 311, 1223, 1419
BslFI GGGAC 4 cut(s) 293, 750, 1205, 1262
BslI CCNNNNNNNGG 8 cut(s) 47, 231, 552, 581, 595, 881, 882, 1638
BsmAI GTCTC 5 cut(s) 245, 803, 817, 876, 1367
BsmFI GGGAC 4 cut(s) 293, 750, 1205, 1262
BsmI GAATGC 1 cut(s) 772
BsnI GGCC 4 cut(s) 1174, 1465, 1573, 1630
Bso31I GGTCTC 1 cut(s) 1367
BsoBI CYCGRG 1 cut(s) 767
Bsp1286I GDGCHC 2 cut(s) 1410, 1455
Bsp1407I TGTACA 1 cut(s) 1344
Bsp19I CCATGG 1 cut(s) 1457
BspACI CCGC 9 cut(s) 203, 572, 582, 845, 847, 1075, 1598, 1611, 1627
BspANI GGCC 4 cut(s) 1174, 1465, 1573, 1630
BspCNI CTCAG 2 cut(s) 399, 799
BspFNI CGCG 2 cut(s) 582, 847
BspHI TCATGA 1 cut(s) 367
BspLI GGNNCC 3 cut(s) 360, 948, 1250
BspOI GCTAGC 1 cut(s) 1286
BspPI GGATC 4 cut(s) 614, 941, 954, 1286
BspTNI GGTCTC 1 cut(s) 1367
BsrDI GCAATG 1 cut(s) 557
BsrGI TGTACA 1 cut(s) 1344
BsrI ACTGG 4 cut(s) 174, 817, 1556, 1632
BssECI CCNNGG 6 cut(s) 845, 880, 881, 1048, 1457, 1574
BssNI GRCGYC 2 cut(s) 586, 1469
BssSI CACGAG 2 cut(s) 960, 1403
BssT1I CCWWGG 3 cut(s) 1048, 1457, 1574
Bst2BI CACGAG 2 cut(s) 960, 1403
Bst2UI CCWGG 3 cut(s) 60, 882, 1176
Bst4CI ACNGT 6 cut(s) 682, 828, 1100, 1253, 1273, 1641
Bst6I CTCTTC 2 cut(s) 808, 1057
BstACI GRCGYC 2 cut(s) 586, 1469
BstAUI TGTACA 1 cut(s) 1344
BstBAI YACGTR 2 cut(s) 395, 833
BstC8I GCNNGC 5 cut(s) 324, 455, 654, 845, 1284
BstDEI CTNAG 3 cut(s) 407, 807, 1106
BstDSI CCRYGG 2 cut(s) 845, 1457
BstF5I GGATG 3 cut(s) 1083, 1312, 1350
BstFNI CGCG 2 cut(s) 582, 847
BstH2I RGCGCY 1 cut(s) 41
BstHHI GCGC 2 cut(s) 40, 1418
BstMAI GTCTC 5 cut(s) 245, 803, 817, 876, 1367
BstMWI GCNNNNNNNGC 2 cut(s) 540, 1610
BstNI CCWGG 3 cut(s) 60, 882, 1176
BstNSI RCATGY 3 cut(s) 217, 326, 1087
BstSCI CCNGG 7 cut(s) 58, 100, 309, 880, 1174, 1221, 1418
BstUI CGCG 2 cut(s) 582, 847
BstV1I GCAGC 1 cut(s) 1555
BstV2I GAAGAC 2 cut(s) 1029, 1423
BstX2I RGATCY 3 cut(s) 668, 795, 946
BstXI CCANNNNNNTGG 1 cut(s) 32
BstYI RGATCY 3 cut(s) 668, 795, 946
BsuI GTATCC 1 cut(s) 307
BsuRI GGCC 4 cut(s) 1174, 1465, 1573, 1630
BtgI CCRYGG 2 cut(s) 845, 1457
BtsCI GGATG 3 cut(s) 1083, 1312, 1350
BtsI GCAGTG 1 cut(s) 304
BtsIMutI CAGTG 1 cut(s) 304
Cac8I GCNNGC 5 cut(s) 324, 455, 654, 845, 1284
CciI TCATGA 1 cut(s) 367
CfoI GCGC 2 cut(s) 40, 1418
Cfr13I GGNCC 5 cut(s) 56, 1172, 1249, 1383, 1629
Cfr42I CCGCGG 1 cut(s) 848
CseI GACGC 3 cut(s) 588, 594, 1477
Csp6I GTAC 4 cut(s) 634, 721, 727, 1345
CviAII CATG 8 cut(s) 47, 214, 323, 368, 790, 1084, 1342, 1458
CviQI GTAC 4 cut(s) 634, 721, 727, 1345
DdeI CTNAG 3 cut(s) 407, 807, 1106
DraI TTTAAA 1 cut(s) 447
DraIII CACNNNGTG 2 cut(s) 299, 395
DriI GACNNNNNGTC 1 cut(s) 1255
EaeI YGGCCR 1 cut(s) 1463
Eam1104I CTCTTC 2 cut(s) 808, 1057
Eam1105I GACNNNNNGTC 1 cut(s) 1255
EarI CTCTTC 2 cut(s) 808, 1057
EciI GGCGGA 1 cut(s) 561
Eco130I CCWWGG 3 cut(s) 1048, 1457, 1574
Eco31I GGTCTC 1 cut(s) 1367
Eco47I GGWCC 3 cut(s) 56, 1249, 1383
Eco57I CTGAAG 1 cut(s) 1041
Eco72I CACGTG 2 cut(s) 395, 833
Eco88I CYCGRG 1 cut(s) 767
EcoRII CCWGG 3 cut(s) 58, 880, 1174
EcoT14I CCWWGG 3 cut(s) 1048, 1457, 1574
EcoT22I ATGCAT 2 cut(s) 215, 1044
ErhI CCWWGG 3 cut(s) 1048, 1457, 1574
FaeI CATG 8 cut(s) 50, 217, 326, 371, 793, 1087, 1345, 1461
FaqI GGGAC 4 cut(s) 293, 750, 1205, 1262
FatI CATG 8 cut(s) 46, 213, 322, 367, 789, 1083, 1341, 1457
FauI CCCGC 1 cut(s) 852
FbaI TGATCA 1 cut(s) 751
FblI GTMKAC 3 cut(s) 184, 1167, 1194
Fnu4HI GCNGC 3 cut(s) 1544, 1611, 1628
FokI GGATG 3 cut(s) 1090, 1319, 1337
Fsp4HI GCNGC 3 cut(s) 1544, 1611, 1628
FspBI CTAG 8 cut(s) 672, 864, 987, 1049, 1283, 1482, 1623, 1644
GlaI GCGC 2 cut(s) 39, 1417
GluI GCNGC 3 cut(s) 1544, 1611, 1628
GsaI CCCAGC 1 cut(s) 1439
HaeII RGCGCY 1 cut(s) 41
HaeIII GGCC 4 cut(s) 1174, 1465, 1573, 1630
HapII CCGG 4 cut(s) 102, 311, 1223, 1419
HgaI GACGC 3 cut(s) 588, 594, 1477
HhaI GCGC 2 cut(s) 40, 1418
Hin1I GRCGYC 2 cut(s) 586, 1469
Hin1II CATG 8 cut(s) 50, 217, 326, 371, 793, 1087, 1345, 1461
Hin6I GCGC 2 cut(s) 38, 1416
HinP1I GCGC 2 cut(s) 38, 1416
HincII GTYRAC 2 cut(s) 185, 1168
HindII GTYRAC 2 cut(s) 185, 1168
HindIII AAGCTT 1 cut(s) 901
HinfI GANTC 4 cut(s) 609, 1028, 1256, 1503
HpaII CCGG 4 cut(s) 102, 311, 1223, 1419
HphI GGTGA 1 cut(s) 1064
Hpy166II GTNNAC 5 cut(s) 185, 915, 1168, 1195, 1637
Hpy188I TCNGA 4 cut(s) 196, 355, 408, 808
Hpy188III TCNNGA 6 cut(s) 143, 368, 767, 962, 1032, 1644
Hpy8I GTNNAC 5 cut(s) 185, 915, 1168, 1195, 1637
Hpy99I CGWCG 4 cut(s) 270, 582, 1172, 1471
HpyAV CCTTC 3 cut(s) 201, 961, 1641
HpyCH4III ACNGT 6 cut(s) 682, 828, 1100, 1253, 1273, 1641
HpyCH4IV ACGT 4 cut(s) 229, 394, 763, 832
HpyCH4V TGCA 8 cut(s) 213, 326, 500, 534, 1042, 1083, 1358, 1543
HpyF10VI GCNNNNNNNGC 2 cut(s) 540, 1610
HpyF3I CTNAG 3 cut(s) 407, 807, 1106
HpySE526I ACGT 4 cut(s) 229, 394, 763, 832
Hsp92I GRCGYC 2 cut(s) 586, 1469
Hsp92II CATG 8 cut(s) 50, 217, 326, 371, 793, 1087, 1345, 1461
HspAI GCGC 2 cut(s) 38, 1416
Ksp22I TGATCA 1 cut(s) 751
KspI CCGCGG 1 cut(s) 848
LmnI GCTCC 4 cut(s) 35, 358, 1413, 1458
Lsp1109I GCAGC 1 cut(s) 1555
MaeI CTAG 8 cut(s) 672, 864, 987, 1049, 1283, 1482, 1623, 1644
MaeII ACGT 4 cut(s) 229, 394, 763, 832
MaeIII GTNAC 5 cut(s) 124, 828, 962, 989, 1314
MboII GAAGA 7 cut(s) 790, 795, 1034, 1074, 1423, 1608, 1611
MflI RGATCY 3 cut(s) 668, 795, 946
MhlI GDGCHC 2 cut(s) 1410, 1455
MlyI GAGTC 1 cut(s) 1265
MmeI TCCRAC 2 cut(s) 586, 924
Mph1103I ATGCAT 2 cut(s) 215, 1044
MseI TTAA 7 cut(s) 138, 446, 485, 696, 711, 1367, 1520
MslI CAYNNNNRTG 4 cut(s) 51, 218, 1098, 1340
MspA1I CMGCKG 1 cut(s) 847
MspI CCGG 4 cut(s) 102, 311, 1223, 1419
MspR9I CCNGG 7 cut(s) 60, 102, 311, 882, 1176, 1223, 1420
Mva1269I GAATGC 1 cut(s) 772
MvaI CCWGG 3 cut(s) 60, 882, 1176
MvnI CGCG 2 cut(s) 582, 847
MwoI GCNNNNNNNGC 2 cut(s) 540, 1610
NciI CCSGG 4 cut(s) 102, 311, 1223, 1420
NcoI CCATGG 1 cut(s) 1457
NheI GCTAGC 1 cut(s) 1282
NlaIII CATG 8 cut(s) 50, 217, 326, 371, 793, 1087, 1345, 1461
NlaIV GGNNCC 3 cut(s) 360, 948, 1250
NmuCI GTSAC 3 cut(s) 124, 828, 962
NsiI ATGCAT 2 cut(s) 215, 1044
NspI RCATGY 3 cut(s) 217, 326, 1087
PaeI GCATGC 1 cut(s) 326
PagI TCATGA 1 cut(s) 367
PasI CCCWGGG 1 cut(s) 881
PcsI WCGNNNNNNNCGW 1 cut(s) 574
PctI GAATGC 1 cut(s) 772
PfeI GAWTC 3 cut(s) 609, 1028, 1503
PflMI CCANNNNNTGG 2 cut(s) 231, 552
PfoI TCCNGGA 2 cut(s) 309, 1221
PkrI GCNGC 3 cut(s) 1545, 1612, 1629
PleI GAGTC 1 cut(s) 1264
PmaCI CACGTG 2 cut(s) 395, 833
PmlI CACGTG 2 cut(s) 395, 833
PpsI GAGTC 1 cut(s) 1264
Ppu21I YACGTR 2 cut(s) 395, 833
PshBI ATTAAT 2 cut(s) 138, 711
PsiI TTATAA 1 cut(s) 249
Psp1406I AACGTT 1 cut(s) 229
Psp6I CCWGG 3 cut(s) 58, 880, 1174
PspCI CACGTG 2 cut(s) 395, 833
PspFI CCCAGC 1 cut(s) 1435
PspGI CCWGG 3 cut(s) 58, 880, 1174
PspN4I GGNNCC 3 cut(s) 360, 948, 1250
PspPI GGNCC 5 cut(s) 56, 1172, 1249, 1383, 1629
PsrI GAACNNNNNNTAC 2 cut(s) 1185, 1217
PsuI RGATCY 3 cut(s) 668, 795, 946
RsaI GTAC 4 cut(s) 635, 722, 728, 1346
RsaNI GTAC 4 cut(s) 634, 721, 727, 1345
RseI CAYNNNNRTG 4 cut(s) 51, 218, 1098, 1340
SacII CCGCGG 1 cut(s) 848
SalI GTCGAC 2 cut(s) 183, 1166
SaqAI TTAA 7 cut(s) 138, 446, 485, 696, 711, 1367, 1520
SatI GCNGC 3 cut(s) 1544, 1611, 1628
Sau96I GGNCC 5 cut(s) 56, 1172, 1249, 1383, 1629
SchI GAGTC 1 cut(s) 1265
ScrFI CCNGG 7 cut(s) 60, 102, 311, 882, 1176, 1223, 1420
SduI GDGCHC 2 cut(s) 1410, 1455
Sfr303I CCGCGG 1 cut(s) 848
SgrBI CCGCGG 1 cut(s) 848
SinI GGWCC 3 cut(s) 56, 1249, 1383
SmiMI CAYNNNNRTG 4 cut(s) 51, 218, 1098, 1340
SpeI ACTAGT 2 cut(s) 986, 1481
SphI GCATGC 1 cut(s) 326
SsiI CCGC 9 cut(s) 203, 572, 582, 845, 847, 1075, 1598, 1611, 1627
SspI AATATT 2 cut(s) 136, 688
SspMI CTAG 8 cut(s) 672, 864, 987, 1049, 1283, 1482, 1623, 1644
StyD4I CCNGG 7 cut(s) 58, 100, 309, 880, 1174, 1221, 1418
StyI CCWWGG 3 cut(s) 1048, 1457, 1574
TaaI ACNGT 6 cut(s) 682, 828, 1100, 1253, 1273, 1641
TaiI ACGT 4 cut(s) 232, 397, 766, 835
TaqI TCGA 6 cut(s) 184, 577, 646, 1033, 1167, 1290
TatI WGTACW 3 cut(s) 633, 720, 1344
TauI GCSGC 2 cut(s) 1613, 1630
TfiI GAWTC 3 cut(s) 609, 1028, 1503
Tru1I TTAA 7 cut(s) 138, 446, 485, 696, 711, 1367, 1520
Tru9I TTAA 7 cut(s) 138, 446, 485, 696, 711, 1367, 1520
TscAI CASTG 1 cut(s) 304
TseFI GTSAC 3 cut(s) 124, 828, 962
TseI GCWGC 1 cut(s) 1543
Tsp45I GTSAC 3 cut(s) 124, 828, 962
TspDTI ATGAA 2 cut(s) 997, 1551
TspGWI ACGGA 2 cut(s) 1343, 1400
TspRI CASTG 1 cut(s) 304
Van91I CCANNNNNTGG 2 cut(s) 231, 552
VpaK11BI GGWCC 3 cut(s) 56, 1249, 1383
VspI ATTAAT 2 cut(s) 138, 711
XapI RAATTY 3 cut(s) 158, 174, 197
XbaI TCTAGA 1 cut(s) 1643
XceI RCATGY 3 cut(s) 217, 326, 1087
XmaJI CCTAGG 1 cut(s) 1048
XmiI GTMKAC 3 cut(s) 184, 1167, 1194
XspI CTAG 8 cut(s) 672, 864, 987, 1049, 1283, 1482, 1623, 1644
Zsp2I ATGCAT 2 cut(s) 215, 1044
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.