FvH4_4g18120

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000270
Physical Location & Seq
Reverse (-)
22045276 .. 22046720
1445 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g18120.t1

Sequence Viewer

Length: 1401 bp
ATGGAGAAATATATGTTAGAGCCATTGATGAAATCATCATCAGGTGGATCCTCATTGTTGATGAGAACTAAGAATATTGATGACCTCCCGGACGTTTTACTGGTTGAAATTCTGTGCCGCCTTCCCTGCAATAAACTCATATTCCAATGCAAGCTTGTGTCCAAGCCTTGGTACAAGCTCATATCTGCTCCTTACTTTGTTCGCCGCTATCTGTGCCTCCAACGTCAAATGCAGAAACCTGTTCTTCTAACAACTCTAGTTCGATTGAATGTAGGTATCCCTGGGAAACCTCTCATCATAACGTCGGATCATCCGGTCTTCAAAACAGCAGCTTCAAGCAATTTCACTCTTAATTTCCTCCCATGCTATAGCCAAGCCAAACAATTAGAAGAACCAGGTTCCTGGGGTGCACCTGTGGTGGTAGGGACTCATAATGACTTGGTTTTGTGCTGCGCAACCAAGAACTATCAACGTGACTACTACCTGTGTAATCCATACACCAAACAATGGGTTTCTCTCCCTCCCACCCCTCAGGTCTACCGCAACGCGCTTGTTGGCTTTCTATGTGATCCATATTTCAAGTACTACTCCTCAGATCATCATAATGGGGAAGAAGAACGTAGAACTTCTTTCATTGTTGATGCTGAGTATAAATGGAAGGTTGTGCGGGTAATATTGAATCCATCAGATCCCAACTTTCGTTTGGAGATCTTCTCTTCTGAGACCCGTCAATGGGGAGAGATATTTGTAGAATGCTCTCAGCCATTTTCTTCATTTGCCTGTGATGACTTCTTTGATAACACCCGGAAACCTAGATCTTCGTTAGCTTCCGTGGCTTACAAAGGAATGTTGTACTGGTGGTGCGAGAAGGACCTTACACTTGAGTTGGATGTGTCCGATTCAAACATACCTAAGTACCGTTTCATTGAACTCCTTGAGAATTTTGAAAGTACTGTTGGATTAGGGGTTCTAGGAGTGGGCGGAGGGCGTTTACAGTTGTGCATGCATGAAGAATATCTCTCTAGAGATCACGATGAGGTTCAGCAGGTATTTAGAGTTAGAGAGTTGAAACAAGTTGTCAAGGACAGGCAAGGCAAACTCAAATGGTTAGCCGACCGTGTTACTATAGTTTCCGAATCCAAAGATATTGAGGTCTACCCTCGACCGTTTACAAATCCAAAGATATTAGCTTTCCACCCAAACAATGAAGACGTCGTGTATTTGACTACTGAAGCTGGCTGCAAAATTTTCACGTGCAGCCTTCGTGAAGGAACATTAAGGGAAATTTCCAAGCTCGAGGTTTCCAAGCTCGAGGCTCCAATAAGGGGATCGAAGAAGACATTCAGCTACTCGTTTTCTCTCCCATGGTGGCCAACCCCTGTTCCAAAGACTCTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

467

Amino Acids

53.74

Weight (kDa)

8.37

Isoelectric Point (pI)

40.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 26 - 67 3.9e-06 F-box domain
b-prop_At3g26010-like PF24750 140 - 426 1.5e-07 F-box protein At3g26010-like, beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000270)

Species Orthologous Gene IDs
fragaria_vesca FvH4_2g30622 FvH4_4g16921 FvH4_4g17782 FvH4_4g17783 FvH4_4g18120 FvH4_6g01541 FvH4_6g02021 FvH4_6g02041 FvH4_6g02071 FvH4_6g02171 FvH4_6g10900 FvH4_6g37932
malus_domestica MD03G1256400.v1.1 MD05G1244200.v1.1 MD10G1000600.v1.1 MD14G1187900.v1.1 MD15G1018100.v1.1
prunus_persica Prupe.2G073200_v2.0.a1 Prupe.3G246100_v2.0.a1 Prupe.3G265100_v2.0.a1 Prupe.4G034700_v2.0.a1 Prupe.4G052100_v2.0.a1 Prupe.4G053600_v2.0.a1 Prupe.5G068800_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.5G070600_v2.0.a1 Prupe.6G075400_v2.0.a1 Prupe.6G075500_v2.0.a1 Prupe.7G028100_v2.0.a1 Prupe.8G074300_v2.0.a1 Prupe.8G110700_v2.0.a1
pyrus_communis pycom05g22060
rosa_chinensis RchiOBHm_Chr2g0151111 RchiOBHm_Chr3g0449911 RchiOBHm_Chr3g0450211 RchiOBHm_Chr3g0457271
rosa_laevigata RLG00000010311 RLG00000010333 RLG00000020423 RLG00000020530 RLG00000020531 RLG00000025776 RLG00000025778 RLG00000025779 RLG00000025780 RLG00000025782 RLG00000025784 RLG00000025786 RLG00000025789 RLG00000025797 RLG00000025820 RLG00000029780 RLG00000029788 RLG00000029793 RLG00000029794 RLG00000029795 RLG00000029798
rosa_multiflora Rmu_co8159556.1_g000001 Rmu_co8268783.1_g000001 Rmu_co8467147.1_g000001 Rmu_sc0000610.1_g000001 Rmu_sc0000610.1_g000009 Rmu_sc0002725.1_g000015 Rmu_sc0004401.1_g000009 Rmu_sc0004404.1_g000009 Rmu_sc0004404.1_g000016 Rmu_sc0005524.1_g000001 Rmu_sc0005524.1_g000004 Rmu_sc0006867.1_g000019 Rmu_sc0008007.1_g000002 Rmu_sc0010912.1_g000004 Rmu_sc0010912.1_g000005 Rmu_sc0013983.1_g000005 Rmu_sc0020391.1_g000001 Rmu_sc0032173.1_g000001 Rmu_sc0036096.1_g000001 Rmu_sc0043012.1_g000001 Rmu_ssc0000424.1_g000019
rosa_roxburghii Rroxscaffold_2G00097990 Rroxscaffold_6G00420940 Rroxscaffold_6G00427700
rosa_rugosa Rorug02G0424600 Rorug02G0424700 Rorug02G0623900 Rorug05G0571000 Rorug05G0571100 Rorug06G0395100
rosa_samantha Rh1CG104900 Rh1DG114100 Rh2AG485200 Rh2BG497300 Rh2DG508200 Rh2DG508300 Rh3AG022000 Rh3AG022300 Rh3AG022500 Rh3AG022600 Rh3AG022800 Rh3AG023000 Rh3BG020000 Rh3BG022700 Rh3BG022900 Rh3BG023000 Rh3BG023200 Rh3BG023300 Rh3BG023600 Rh3CG018700 Rh3CG021100 Rh3CG021600 Rh3CG021800 Rh3CG021900 Rh3CG022100 Rh3CG022200 Rh3CG022600 Rh3DG022400 Rh3DG022700 Rh3DG022800 Rh3DG023000 Rh3DG023100 Rh3DG023500 Rh6AG511800 Rh6AG512500 Rh6BG523100 Rh6BG523300 Rh6CG528700 Rh6DG514700
rosa_wichuraiana Rw1G008720 Rw2G039750 Rw3G001810 Rw3G002050 Rw6G044530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1215
Acc16I TGCGCA 1 cut(s) 454
Acc36I ACCTGC 1 cut(s) 1036
AccB7I CCANNNNNTGG 2 cut(s) 168, 507
AccI GTMKAC 2 cut(s) 537, 1155
AccII CGCG 1 cut(s) 548
AciI CCGC 5 cut(s) 118, 205, 541, 667, 981
AclWI GGATC 6 cut(s) 42, 55, 315, 563, 683, 1336
AcoI YGGCCR 1 cut(s) 1370
AcsI RAATTY 4 cut(s) 108, 940, 1245, 1284
AcuI CTGAAG 1 cut(s) 1251
AcvI CACGTG 1 cut(s) 1254
AcyI GRCGYC 1 cut(s) 1212
AfaI GTAC 5 cut(s) 173, 584, 854, 917, 952
AfiI CCNNNNNNNGG 5 cut(s) 168, 507, 732, 733, 1325
AjnI CCWGG 3 cut(s) 280, 394, 401
AjuI GAANNNNNNNTTGG 2 cut(s) 939, 971
AloI GAACNNNNNNTCC 2 cut(s) 951, 983
AluBI AGCT 9 cut(s) 154, 178, 332, 827, 1190, 1235, 1294, 1309, 1347
AluI AGCT 9 cut(s) 154, 178, 332, 827, 1190, 1235, 1294, 1309, 1347
Alw21I GWGCWC 1 cut(s) 412
Alw26I GTCTC 1 cut(s) 716
Alw44I GTGCAC 1 cut(s) 408
AlwI GGATC 6 cut(s) 42, 55, 315, 563, 683, 1336
Ama87I CYCGRG 2 cut(s) 1295, 1310
AoxI GGCC 1 cut(s) 1370
ApaLI GTGCAC 1 cut(s) 408
ApeKI GCWGC 4 cut(s) 329, 450, 1239, 1257
ApoI RAATTY 4 cut(s) 108, 940, 1245, 1284
Asp700I GAANNNNTTC 1 cut(s) 1340
AspLEI GCGC 2 cut(s) 455, 550
AspS9I GGNCC 1 cut(s) 871
AsuC2I CCSGG 2 cut(s) 89, 805
AvaI CYCGRG 2 cut(s) 1295, 1310
AvaII GGWCC 1 cut(s) 871
AxyI CCTNAGG 1 cut(s) 531
BaeGI GKGCMC 1 cut(s) 412
BaeI ACNNNNGTAYC 2 cut(s) 899, 932
BalI TGGCCA 1 cut(s) 1372
BamHI GGATCC 1 cut(s) 47
BbrPI CACGTG 1 cut(s) 1254
BbsI GAAGAC 3 cut(s) 310, 1215, 1343
Bbv12I GWGCWC 1 cut(s) 412
BbvI GCAGC 4 cut(s) 341, 437, 1226, 1269
BccI CCATC 1 cut(s) 691
BciT130I CCWGG 3 cut(s) 282, 396, 403
BciVI GTATCC 1 cut(s) 287
BcnI CCSGG 2 cut(s) 89, 805
BcoDI GTCTC 1 cut(s) 716
BfaI CTAG 5 cut(s) 257, 813, 971, 1023, 1394
BfmI CTRYAG 2 cut(s) 367, 1125
BfuAI ACCTGC 1 cut(s) 1036
BfuI GTATCC 1 cut(s) 287
BglII AGATCT 2 cut(s) 708, 815
BisI GCNGC 6 cut(s) 118, 205, 330, 451, 1240, 1258
BlsI GCNGC 6 cut(s) 119, 206, 331, 452, 1241, 1259
BmcAI AGTACT 2 cut(s) 584, 952
Bme1390I CCNGG 5 cut(s) 89, 282, 396, 403, 805
Bme18I GGWCC 1 cut(s) 871
BmeT110I CYCGRG 2 cut(s) 1295, 1310
BmgT120I GGNCC 1 cut(s) 871
BmiI GGNNCC 3 cut(s) 49, 400, 1317
BmrFI CCNGG 5 cut(s) 89, 282, 396, 403, 805
BmsI GCATC 1 cut(s) 631
BpiI GAAGAC 3 cut(s) 310, 1215, 1343
BplI GAGNNNNNCTC 2 cut(s) 698, 730
BpuEI CTTGAG 2 cut(s) 902, 956
BpuMI CCSGG 2 cut(s) 89, 805
BsaAI YACGTR 1 cut(s) 1254
BsaHI GRCGYC 1 cut(s) 1212
BsaI GGTCTC 1 cut(s) 716
BsaJI CCNNGG 6 cut(s) 167, 280, 281, 402, 831, 1364
BsaWI WCCGGW 1 cut(s) 313
Bsc4I CCNNNNNNNGG 5 cut(s) 168, 507, 732, 733, 1325
Bse1I ACTGG 2 cut(s) 105, 860
Bse21I CCTNAGG 1 cut(s) 531
BseBI CCWGG 3 cut(s) 282, 396, 403
BseDI CCNNGG 6 cut(s) 167, 280, 281, 402, 831, 1364
BseGI GGATG 2 cut(s) 310, 895
BseLI CCNNNNNNNGG 5 cut(s) 168, 507, 732, 733, 1325
BseMII CTCAG 5 cut(s) 545, 606, 636, 711, 773
BseNI ACTGG 2 cut(s) 105, 860
BseRI GAGGAG 1 cut(s) 580
BseSI GKGCMC 1 cut(s) 412
BseXI GCAGC 4 cut(s) 341, 437, 1226, 1269
BsgI GTGCAG 1 cut(s) 1276
Bsh1236I CGCG 1 cut(s) 548
Bsh1285I CGRYCG 2 cut(s) 1117, 1166
BshFI GGCC 1 cut(s) 1372
BsiEI CGRYCG 2 cut(s) 1117, 1166
BsiHKAI GWGCWC 1 cut(s) 412
BsiHKCI CYCGRG 2 cut(s) 1295, 1310
BsiSI CCGG 3 cut(s) 89, 314, 805
BslFI GGGAC 1 cut(s) 439
BslI CCNNNNNNNGG 5 cut(s) 168, 507, 732, 733, 1325
BsmAI GTCTC 1 cut(s) 716
BsmFI GGGAC 1 cut(s) 439
BsmI GAATGC 1 cut(s) 758
BsnI GGCC 1 cut(s) 1372
Bso31I GGTCTC 1 cut(s) 716
BsoBI CYCGRG 2 cut(s) 1295, 1310
Bsp1286I GDGCHC 1 cut(s) 412
Bsp143I GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
Bsp19I CCATGG 1 cut(s) 1364
BspACI CCGC 5 cut(s) 118, 205, 541, 667, 981
BspANI GGCC 1 cut(s) 1372
BspCNI CTCAG 5 cut(s) 544, 605, 637, 712, 772
BspFNI CGCG 1 cut(s) 548
BspLI GGNNCC 3 cut(s) 49, 400, 1317
BspMI ACCTGC 1 cut(s) 1036
BspPI GGATC 6 cut(s) 42, 55, 315, 563, 683, 1336
BspTNI GGTCTC 1 cut(s) 716
BsrI ACTGG 2 cut(s) 105, 860
BssECI CCNNGG 6 cut(s) 167, 280, 281, 402, 831, 1364
BssMI GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
BssNI GRCGYC 1 cut(s) 1212
BssT1I CCWWGG 2 cut(s) 167, 1364
Bst2UI CCWGG 3 cut(s) 282, 396, 403
Bst4CI ACNGT 5 cut(s) 920, 955, 996, 1118, 1167
Bst6I CTCTTC 1 cut(s) 721
BstACI GRCGYC 1 cut(s) 1212
BstBAI YACGTR 1 cut(s) 1254
BstC8I GCNNGC 3 cut(s) 152, 1004, 1237
BstDEI CTNAG 7 cut(s) 69, 531, 592, 645, 720, 759, 912
BstDSI CCRYGG 2 cut(s) 831, 1364
BstF5I GGATG 2 cut(s) 310, 895
BstFNI CGCG 1 cut(s) 548
BstHHI GCGC 2 cut(s) 455, 550
BstKTI GATC 9 cut(s) 50, 310, 571, 598, 691, 711, 818, 1030, 1331
BstMAI GTCTC 1 cut(s) 716
BstMBI GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
BstMCI CGRYCG 2 cut(s) 1117, 1166
BstMWI GCNNNNNNNGC 3 cut(s) 126, 213, 833
BstNI CCWGG 3 cut(s) 282, 396, 403
BstNSI RCATGY 1 cut(s) 1006
BstSCI CCNGG 5 cut(s) 87, 280, 394, 401, 803
BstSFI CTRYAG 2 cut(s) 367, 1125
BstSLI GKGCMC 1 cut(s) 412
BstUI CGCG 1 cut(s) 548
BstV1I GCAGC 4 cut(s) 341, 437, 1226, 1269
BstV2I GAAGAC 3 cut(s) 310, 1215, 1343
BstX2I RGATCY 4 cut(s) 47, 688, 708, 815
BstXI CCANNNNNNTGG 1 cut(s) 402
BstYI RGATCY 4 cut(s) 47, 688, 708, 815
Bsu36I CCTNAGG 1 cut(s) 531
BsuI GTATCC 1 cut(s) 287
BsuRI GGCC 1 cut(s) 1372
BtgI CCRYGG 2 cut(s) 831, 1364
BtsCI GGATG 2 cut(s) 310, 895
BveI ACCTGC 1 cut(s) 1036
Cac8I GCNNGC 3 cut(s) 152, 1004, 1237
CfoI GCGC 2 cut(s) 455, 550
Cfr13I GGNCC 1 cut(s) 871
CsiI ACCWGGT 1 cut(s) 394
Csp6I GTAC 5 cut(s) 172, 583, 853, 916, 951
CviAII CATG 4 cut(s) 363, 1003, 1007, 1365
CviQI GTAC 5 cut(s) 172, 583, 853, 916, 951
DdeI CTNAG 7 cut(s) 69, 531, 592, 645, 720, 759, 912
DpnI GATC 9 cut(s) 49, 309, 570, 597, 690, 710, 817, 1029, 1330
DpnII GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
EaeI YGGCCR 1 cut(s) 1370
Eam1104I CTCTTC 1 cut(s) 721
EarI CTCTTC 1 cut(s) 721
EciI GGCGGA 1 cut(s) 996
Eco130I CCWWGG 2 cut(s) 167, 1364
Eco31I GGTCTC 1 cut(s) 716
Eco47I GGWCC 1 cut(s) 871
Eco57I CTGAAG 1 cut(s) 1251
Eco72I CACGTG 1 cut(s) 1254
Eco81I CCTNAGG 1 cut(s) 531
Eco88I CYCGRG 2 cut(s) 1295, 1310
EcoO109I RGGNCCY 1 cut(s) 871
EcoRII CCWGG 3 cut(s) 280, 394, 401
EcoT14I CCWWGG 2 cut(s) 167, 1364
EcoT22I ATGCAT 1 cut(s) 1008
ErhI CCWWGG 2 cut(s) 167, 1364
FaeI CATG 4 cut(s) 366, 1006, 1010, 1368
FaqI GGGAC 1 cut(s) 439
FatI CATG 4 cut(s) 362, 1002, 1006, 1364
FauI CCCGC 1 cut(s) 660
FblI GTMKAC 2 cut(s) 537, 1155
Fnu4HI GCNGC 6 cut(s) 118, 205, 330, 451, 1240, 1258
FokI GGATG 2 cut(s) 297, 902
Fsp4HI GCNGC 6 cut(s) 118, 205, 330, 451, 1240, 1258
FspBI CTAG 5 cut(s) 257, 813, 971, 1023, 1394
FspI TGCGCA 1 cut(s) 454
GlaI GCGC 2 cut(s) 454, 549
GluI GCNGC 6 cut(s) 118, 205, 330, 451, 1240, 1258
HaeIII GGCC 1 cut(s) 1372
HapII CCGG 3 cut(s) 89, 314, 805
HhaI GCGC 2 cut(s) 455, 550
Hin1I GRCGYC 1 cut(s) 1212
Hin1II CATG 4 cut(s) 366, 1006, 1010, 1368
Hin6I GCGC 2 cut(s) 453, 548
HinP1I GCGC 2 cut(s) 453, 548
HindIII AAGCTT 1 cut(s) 152
HinfI GANTC 5 cut(s) 427, 679, 899, 1136, 1390
HpaII CCGG 3 cut(s) 89, 314, 805
Hpy166II GTNNAC 5 cut(s) 410, 538, 992, 1156, 1170
Hpy188I TCNGA 6 cut(s) 307, 595, 688, 721, 898, 1135
Hpy188III TCNNGA 4 cut(s) 1023, 1031, 1265, 1394
Hpy8I GTNNAC 5 cut(s) 410, 538, 992, 1156, 1170
Hpy99I CGWCG 2 cut(s) 307, 1217
HpyAV CCTTC 5 cut(s) 131, 652, 862, 1262, 1271
HpyCH4III ACNGT 5 cut(s) 920, 955, 996, 1118, 1167
HpyCH4IV ACGT 7 cut(s) 93, 223, 302, 472, 619, 1212, 1253
HpyCH4V TGCA 8 cut(s) 129, 150, 232, 410, 1002, 1006, 1242, 1257
HpyF10VI GCNNNNNNNGC 3 cut(s) 126, 213, 833
HpyF3I CTNAG 7 cut(s) 69, 531, 592, 645, 720, 759, 912
HpySE526I ACGT 7 cut(s) 93, 223, 302, 472, 619, 1212, 1253
Hsp92I GRCGYC 1 cut(s) 1212
Hsp92II CATG 4 cut(s) 366, 1006, 1010, 1368
HspAI GCGC 2 cut(s) 453, 548
Kzo9I GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
LmnI GCTCC 2 cut(s) 193, 1321
Lsp1109I GCAGC 4 cut(s) 341, 437, 1226, 1269
LweI GCATC 1 cut(s) 631
MabI ACCWGGT 1 cut(s) 394
MaeI CTAG 5 cut(s) 257, 813, 971, 1023, 1394
MaeII ACGT 7 cut(s) 93, 223, 302, 472, 619, 1212, 1253
MaeIII GTNAC 2 cut(s) 473, 1120
MalI GATC 9 cut(s) 49, 309, 570, 597, 690, 710, 817, 1029, 1330
MboI GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
MflI RGATCY 4 cut(s) 47, 688, 708, 815
MhlI GDGCHC 1 cut(s) 412
MlsI TGGCCA 1 cut(s) 1372
MluCI AATT 7 cut(s) 108, 340, 352, 383, 940, 1245, 1284
MluNI TGGCCA 1 cut(s) 1372
MlyI GAGTC 2 cut(s) 421, 1384
MmeI TCCRAC 4 cut(s) 244, 285, 867, 937
Mox20I TGGCCA 1 cut(s) 1372
Mph1103I ATGCAT 1 cut(s) 1008
MroXI GAANNNNTTC 1 cut(s) 1340
MscI TGGCCA 1 cut(s) 1372
MseI TTAA 2 cut(s) 351, 1277
MslI CAYNNNNRTG 1 cut(s) 603
Msp20I TGGCCA 1 cut(s) 1372
MspI CCGG 3 cut(s) 89, 314, 805
MspR9I CCNGG 5 cut(s) 89, 282, 396, 403, 805
Mva1269I GAATGC 1 cut(s) 758
MvaI CCWGG 3 cut(s) 282, 396, 403
MvnI CGCG 1 cut(s) 548
MwoI GCNNNNNNNGC 3 cut(s) 126, 213, 833
NciI CCSGG 2 cut(s) 89, 805
NcoI CCATGG 1 cut(s) 1364
NdeII GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
NlaIII CATG 4 cut(s) 366, 1006, 1010, 1368
NlaIV GGNNCC 3 cut(s) 49, 400, 1317
NmuCI GTSAC 1 cut(s) 473
NsbI TGCGCA 1 cut(s) 454
NsiI ATGCAT 1 cut(s) 1008
NspI RCATGY 1 cut(s) 1006
PaeI GCATGC 1 cut(s) 1006
PaeR7I CTCGAG 2 cut(s) 1295, 1310
PasI CCCWGGG 1 cut(s) 281
PctI GAATGC 1 cut(s) 758
PdmI GAANNNNTTC 1 cut(s) 1340
PfeI GAWTC 3 cut(s) 679, 899, 1136
PflMI CCANNNNNTGG 2 cut(s) 168, 507
PfoI TCCNGGA 1 cut(s) 87
PkrI GCNGC 6 cut(s) 119, 206, 331, 452, 1241, 1259
PleI GAGTC 2 cut(s) 421, 1384
PmaCI CACGTG 1 cut(s) 1254
PmlI CACGTG 1 cut(s) 1254
PpsI GAGTC 2 cut(s) 421, 1384
Ppu21I YACGTR 1 cut(s) 1254
PpuMI RGGWCCY 1 cut(s) 871
Psp5II RGGWCCY 1 cut(s) 871
Psp6I CCWGG 3 cut(s) 280, 394, 401
PspCI CACGTG 1 cut(s) 1254
PspGI CCWGG 3 cut(s) 280, 394, 401
PspN4I GGNNCC 3 cut(s) 49, 400, 1317
PspPI GGNCC 1 cut(s) 871
PspPPI RGGWCCY 1 cut(s) 871
PspXI VCTCGAGB 2 cut(s) 1295, 1310
PsuI RGATCY 4 cut(s) 47, 688, 708, 815
RsaI GTAC 5 cut(s) 173, 584, 854, 917, 952
RsaNI GTAC 5 cut(s) 172, 583, 853, 916, 951
RseI CAYNNNNRTG 1 cut(s) 603
SaqAI TTAA 2 cut(s) 351, 1277
SatI GCNGC 6 cut(s) 118, 205, 330, 451, 1240, 1258
Sau3AI GATC 9 cut(s) 47, 307, 568, 595, 688, 708, 815, 1027, 1328
Sau96I GGNCC 1 cut(s) 871
ScaI AGTACT 2 cut(s) 584, 952
SchI GAGTC 2 cut(s) 421, 1384
ScrFI CCNGG 5 cut(s) 89, 282, 396, 403, 805
SduI GDGCHC 1 cut(s) 412
SexAI ACCWGGT 1 cut(s) 394
SfaNI GCATC 1 cut(s) 631
SfcI CTRYAG 2 cut(s) 367, 1125
Sfr274I CTCGAG 2 cut(s) 1295, 1310
SinI GGWCC 1 cut(s) 871
SlaI CTCGAG 2 cut(s) 1295, 1310
SmiMI CAYNNNNRTG 1 cut(s) 603
SmlI CTYRAG 4 cut(s) 881, 935, 1295, 1310
SmoI CTYRAG 4 cut(s) 881, 935, 1295, 1310
SphI GCATGC 1 cut(s) 1006
Sse9I AATT 7 cut(s) 108, 340, 352, 383, 940, 1245, 1284
SsiI CCGC 5 cut(s) 118, 205, 541, 667, 981
SspI AATATT 2 cut(s) 76, 675
SspMI CTAG 5 cut(s) 257, 813, 971, 1023, 1394
StyD4I CCNGG 5 cut(s) 87, 280, 394, 401, 803
StyI CCWWGG 2 cut(s) 167, 1364
TaaI ACNGT 5 cut(s) 920, 955, 996, 1118, 1167
TaiI ACGT 7 cut(s) 96, 226, 305, 475, 622, 1215, 1256
TaqI TCGA 5 cut(s) 262, 1162, 1296, 1311, 1331
TasI AATT 7 cut(s) 108, 340, 352, 383, 940, 1245, 1284
TatI WGTACW 3 cut(s) 582, 852, 950
TauI GCSGC 2 cut(s) 120, 207
TfiI GAWTC 3 cut(s) 679, 899, 1136
Tru1I TTAA 2 cut(s) 351, 1277
Tru9I TTAA 2 cut(s) 351, 1277
TseFI GTSAC 1 cut(s) 473
TseI GCWGC 4 cut(s) 329, 450, 1239, 1257
Tsp45I GTSAC 1 cut(s) 473
TspDTI ATGAA 6 cut(s) 44, 622, 762, 913, 1023, 1221
TspGWI ACGGA 1 cut(s) 820
Van91I CCANNNNNTGG 2 cut(s) 168, 507
VneI GTGCAC 1 cut(s) 408
VpaK11BI GGWCC 1 cut(s) 871
XapI RAATTY 4 cut(s) 108, 940, 1245, 1284
XbaI TCTAGA 2 cut(s) 1022, 1393
XceI RCATGY 1 cut(s) 1006
XcmI CCANNNNNNNNNTGG 1 cut(s) 700
XhoI CTCGAG 2 cut(s) 1295, 1310
XmiI GTMKAC 2 cut(s) 537, 1155
XmnI GAANNNNTTC 1 cut(s) 1340
XspI CTAG 5 cut(s) 257, 813, 971, 1023, 1394
ZraI GACGTC 1 cut(s) 1213
ZrmI AGTACT 2 cut(s) 584, 952
Zsp2I ATGCAT 1 cut(s) 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.