MD01G1093000.v1.1
NAC Family

NAC domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000197
Physical Location & Seq
Reverse (-)
20779980 .. 20782726
2747 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1093000.v1.1.491

Sequence Viewer

Length: 1338 bp
ATGAGCAGTGGTGGCGGCGGCAGCAGCAGCAGCAGCATGACAACTGCAGAAGGAGATGAGGTTCATGTGAATGTGATCCTACTACCTGGGTTCAAATTCTGCCCCACCGATGAGTTGCTGGTTTGCTACTACTTGAAGAACAAGATACAGGGCACCGACTCCCATTTCCGCTCCGTCATCCCTGAGATCGATGTCAGCAAGTACGAGCCCTGGGATATTCCTGCTTTCTTTCCAGAAGTTCAAGAGAAGGAATGGTTCTTCTTCAGCCGGCCCAAATACAAGGACATCAACAAGCCTCGCCGCAACCGGACCACGTATAAAGGCTTTTACAAGAGCACAGGAGGTGAGAGGGAGATCAGGGCTGAAGAATCCCAAGCTGTGATTGGGAAGAAGAGGTTTCTGACCTTCCACGAAGGTCGTGCACGTGGGCCGAAAGCAACGAAGACCGATTGGGTAATCCATGAGTTTACAGAAACTGAGGTGGGTTCCTTTGTCCTCTGCCTCCTGAAGAAAAGGTCACCTAGTTATAAGAAGCCGAAGGGTGATCCAATCTGCGGCAAATTAGCTGATTCAGGTGCTAACTCGGAAGACAATCAAGCTGCTGTAAGTGATGCGATTCCAGAGCCAGTGGAACATCTGGGATACAAAGGGCGAGGAGATGTTAATAGCTCTGAGCCTCCAGATGGTTCTCGTCTTATAGACAGTAATAACATTTTGAGATTTGATGATGGTGATGATGAAACTGGTGACGTGAAATTCCCGGATTTGGATGATCCAGCTGCATCTGCTAGGGTTCTAGAGTTGCGTGCTGAGATGGAAGAAATTCTGAATTCACCCCCTCAAACACCGCACCAGACACCACAAGATTACCTTTGCTCTACATTCCTGTCATCAGGAAACATACAGCTGGGAGCTGTTCTGCAAGCCAATGGCACTAGTGATGATTGTAATATAATACAATCACCATTTGGAGATAATAATTATTCTTATGCTGATAAGAATGATATTTCAACCTGTGATGAAGGTGAACCTTATAGCTTCACCGTGAATGATTTCGAAAACAAAGTTGCAGATGATATGTCTCAAGAGATATGTGTTCAGCCACAAAAGGACATGGATCTACTTCAGTTACATGTCGCACAACAGTCACGAACATACACAAAATTCGAAGATTTTATGGATGCCAATATTTTTTATGATGAATGCATAGAGTGGCAGCCTCAAATTGGAGATGAATATTCACATGTTAATTGCTGCAATGCATTTGATTTGGAAAATCAATATACAGATAACATGACTCTGGAGGTGAGAATAATCATGCTTGAACAATTTTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

446

Amino Acids

50.17

Weight (kDa)

4.59

Isoelectric Point (pI)

54.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NAM PF02365 29 - 157 2.2e-33 No apical meristem (NAM) protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000197)

Species Orthologous Gene IDs
fragaria_vesca FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 528
AccB1I GGYRCC 1 cut(s) 152
AccBSI CCGCTC 1 cut(s) 171
AciI CCGC 6 cut(s) 15, 18, 169, 301, 555, 848
AclWI GGATC 4 cut(s) 70, 539, 767, 1125
AcsI RAATTY 5 cut(s) 95, 755, 822, 829, 1163
AcuI CTGAAG 4 cut(s) 247, 384, 527, 1109
AcvI CACGTG 1 cut(s) 425
AfaI GTAC 1 cut(s) 203
AfiI CCNNNNNNNGG 4 cut(s) 554, 683, 766, 1226
AflIII ACRYGT 2 cut(s) 1132, 1243
AgsI TTSAA 5 cut(s) 94, 136, 242, 1011, 1325
AhlI ACTAGT 1 cut(s) 935
AjiI CACGTC 1 cut(s) 751
AjnI CCWGG 2 cut(s) 85, 209
AloI GAACNNNNNNTCC 2 cut(s) 45, 77
AluBI AGCT 8 cut(s) 377, 566, 599, 669, 779, 907, 914, 1038
AluI AGCT 8 cut(s) 377, 566, 599, 669, 779, 907, 914, 1038
Alw21I GWGCWC 2 cut(s) 338, 424
Alw26I GTCTC 1 cut(s) 1086
Alw44I GTGCAC 1 cut(s) 420
AlwI GGATC 4 cut(s) 70, 539, 767, 1125
AlwNI CAGNNNCTG 1 cut(s) 476
AoxI GGCC 2 cut(s) 269, 428
ApaLI GTGCAC 1 cut(s) 420
ApeKI GCWGC 9 cut(s) 21, 24, 27, 30, 33, 599, 779, 1216, 1254
ApoI RAATTY 5 cut(s) 95, 755, 822, 829, 1163
Asp700I GAANNNNTTC 2 cut(s) 822, 1052
AspS9I GGNCC 3 cut(s) 270, 309, 428
AsuC2I CCSGG 1 cut(s) 761
AsuII TTCGAA 2 cut(s) 1056, 1167
AvaII GGWCC 1 cut(s) 309
BaeGI GKGCMC 2 cut(s) 155, 424
BanI GGYRCC 1 cut(s) 152
BanII GRGCYC 1 cut(s) 210
BbrPI CACGTG 1 cut(s) 425
BbsI GAAGAC 2 cut(s) 449, 594
Bbv12I GWGCWC 2 cut(s) 338, 424
BbvI GCAGC 9 cut(s) 33, 36, 39, 42, 45, 586, 766, 1228, 1241
BccI CCATC 3 cut(s) 677, 722, 808
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BciT130I CCWGG 2 cut(s) 87, 211
BciVI GTATCC 1 cut(s) 635
BcnI CCSGG 1 cut(s) 761
BcoDI GTCTC 1 cut(s) 1086
BcuI ACTAGT 1 cut(s) 935
BfaI CTAG 4 cut(s) 522, 789, 797, 936
BfmI CTRYAG 1 cut(s) 45
BfuI GTATCC 1 cut(s) 635
Bme1390I CCNGG 3 cut(s) 87, 211, 761
Bme18I GGWCC 1 cut(s) 309
BmgBI CACGTC 1 cut(s) 751
BmgT120I GGNCC 3 cut(s) 270, 309, 428
BmiI GGNNCC 2 cut(s) 154, 487
BmrFI CCNGG 3 cut(s) 87, 211, 761
BmsI GCATC 3 cut(s) 601, 791, 1171
BpiI GAAGAC 2 cut(s) 449, 594
BpmI CTGGAG 2 cut(s) 663, 1322
Bpu14I TTCGAA 2 cut(s) 1056, 1167
BpuEI CTTGAG 1 cut(s) 1068
BpuMI CCSGG 1 cut(s) 761
Bsa29I ATCGAT 1 cut(s) 189
BsaAI YACGTR 2 cut(s) 315, 425
BsaJI CCNNGG 3 cut(s) 86, 209, 210
BsaWI WCCGGW 1 cut(s) 306
BsaXI ACNNNNNCTCC 2 cut(s) 45, 75
Bsc4I CCNNNNNNNGG 4 cut(s) 554, 683, 766, 1226
Bse118I RCCGGY 1 cut(s) 267
Bse1I ACTGG 2 cut(s) 626, 748
Bse3DI GCAATG 1 cut(s) 1264
BseBI CCWGG 2 cut(s) 87, 211
BseCI ATCGAT 1 cut(s) 189
BseDI CCNNGG 3 cut(s) 86, 209, 210
BseGI GGATG 3 cut(s) 177, 775, 1186
BseLI CCNNNNNNNGG 4 cut(s) 554, 683, 766, 1226
BseMI GCAATG 1 cut(s) 1264
BseMII CTCAG 4 cut(s) 174, 468, 663, 801
BseNI ACTGG 2 cut(s) 626, 748
BseRI GAGGAG 1 cut(s) 669
BseSI GKGCMC 2 cut(s) 155, 424
BseXI GCAGC 9 cut(s) 33, 36, 39, 42, 45, 586, 766, 1228, 1241
BseYI CCCAGC 1 cut(s) 907
BshFI GGCC 2 cut(s) 271, 430
BshNI GGYRCC 1 cut(s) 152
BshVI ATCGAT 1 cut(s) 189
BsiHKAI GWGCWC 2 cut(s) 338, 424
BsiSI CCGG 3 cut(s) 268, 307, 761
BslI CCNNNNNNNGG 4 cut(s) 554, 683, 766, 1226
BsmAI GTCTC 1 cut(s) 1086
BsmI GAATGC 1 cut(s) 1208
BsnI GGCC 2 cut(s) 271, 430
Bsp119I TTCGAA 2 cut(s) 1056, 1167
Bsp1286I GDGCHC 4 cut(s) 155, 210, 338, 424
Bsp143I GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
BspACI CCGC 6 cut(s) 15, 18, 169, 301, 555, 848
BspANI GGCC 2 cut(s) 271, 430
BspCNI CTCAG 4 cut(s) 175, 469, 664, 802
BspDI ATCGAT 1 cut(s) 189
BspLI GGNNCC 2 cut(s) 154, 487
BspMAI CTGCAG 1 cut(s) 49
BspPI GGATC 4 cut(s) 70, 539, 767, 1125
BspT104I TTCGAA 2 cut(s) 1056, 1167
BspT107I GGYRCC 1 cut(s) 152
BsrBI CCGCTC 1 cut(s) 171
BsrDI GCAATG 1 cut(s) 1264
BsrFI RCCGGY 1 cut(s) 267
BsrI ACTGG 2 cut(s) 626, 748
BssAI RCCGGY 1 cut(s) 267
BssECI CCNNGG 3 cut(s) 86, 209, 210
BssMI GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
Bst2UI CCWGG 2 cut(s) 87, 211
Bst4CI ACNGT 3 cut(s) 704, 1045, 1146
Bst6I CTCTTC 1 cut(s) 386
BstBAI YACGTR 2 cut(s) 315, 425
BstBI TTCGAA 2 cut(s) 1056, 1167
BstC8I GCNNGC 3 cut(s) 269, 807, 924
BstDEI CTNAG 4 cut(s) 183, 477, 672, 810
BstEII GGTNACC 1 cut(s) 516
BstF5I GGATG 3 cut(s) 177, 775, 1186
BstKTI GATC 6 cut(s) 78, 189, 357, 547, 775, 1120
BstMAI GTCTC 1 cut(s) 1086
BstMBI GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
BstMWI GCNNNNNNNGC 7 cut(s) 12, 21, 24, 27, 30, 33, 785
BstNI CCWGG 2 cut(s) 87, 211
BstNSI RCATGY 2 cut(s) 1136, 1247
BstPI GGTNACC 1 cut(s) 516
BstSCI CCNGG 3 cut(s) 85, 209, 759
BstSFI CTRYAG 1 cut(s) 45
BstSLI GKGCMC 2 cut(s) 155, 424
BstV1I GCAGC 9 cut(s) 33, 36, 39, 42, 45, 586, 766, 1228, 1241
BstV2I GAAGAC 2 cut(s) 449, 594
BstX2I RGATCY 1 cut(s) 1117
BstYI RGATCY 1 cut(s) 1117
Bsu15I ATCGAT 1 cut(s) 189
BsuI GTATCC 1 cut(s) 635
BsuRI GGCC 2 cut(s) 271, 430
BsuTUI ATCGAT 1 cut(s) 189
BtrI CACGTC 1 cut(s) 751
BtsCI GGATG 3 cut(s) 177, 775, 1186
BtsI GCAGTG 1 cut(s) 13
BtsIMutI CAGTG 2 cut(s) 13, 633
Cac8I GCNNGC 3 cut(s) 269, 807, 924
CaiI CAGNNNCTG 1 cut(s) 476
Cfr10I RCCGGY 1 cut(s) 267
Cfr13I GGNCC 3 cut(s) 270, 309, 428
ClaI ATCGAT 1 cut(s) 189
Csp6I GTAC 1 cut(s) 202
CviAII CATG 8 cut(s) 37, 65, 461, 1114, 1133, 1244, 1294, 1318
CviQI GTAC 1 cut(s) 202
DdeI CTNAG 4 cut(s) 183, 477, 672, 810
DpnI GATC 6 cut(s) 77, 188, 356, 546, 774, 1119
DpnII GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
Eam1104I CTCTTC 1 cut(s) 386
EarI CTCTTC 1 cut(s) 386
Eco24I GRGCYC 1 cut(s) 210
Eco47I GGWCC 1 cut(s) 309
Eco57I CTGAAG 4 cut(s) 247, 384, 527, 1109
Eco72I CACGTG 1 cut(s) 425
Eco91I GGTNACC 1 cut(s) 516
EcoO65I GGTNACC 1 cut(s) 516
EcoRI GAATTC 1 cut(s) 829
EcoRII CCWGG 2 cut(s) 85, 209
EcoT22I ATGCAT 2 cut(s) 1208, 1264
EcoT38I GRGCYC 1 cut(s) 210
FaeI CATG 8 cut(s) 40, 68, 464, 1117, 1136, 1247, 1297, 1321
FalI AAGNNNNNCTT 2 cut(s) 855, 887
FatI CATG 8 cut(s) 36, 64, 460, 1113, 1132, 1243, 1293, 1317
FokI GGATG 3 cut(s) 164, 782, 1193
FriOI GRGCYC 1 cut(s) 210
FspBI CTAG 4 cut(s) 522, 789, 797, 936
GsaI CCCAGC 1 cut(s) 911
GsuI CTGGAG 2 cut(s) 663, 1322
HaeIII GGCC 2 cut(s) 271, 430
HapII CCGG 3 cut(s) 268, 307, 761
Hin1II CATG 8 cut(s) 40, 68, 464, 1117, 1136, 1247, 1297, 1321
HinfI GANTC 5 cut(s) 158, 368, 569, 616, 1297
HpaII CCGG 3 cut(s) 268, 307, 761
Hpy166II GTNNAC 3 cut(s) 422, 468, 1028
Hpy188I TCNGA 4 cut(s) 402, 586, 673, 828
Hpy8I GTNNAC 3 cut(s) 422, 468, 1028
HpyAV CCTTC 6 cut(s) 44, 241, 407, 415, 532, 1016
HpyCH4III ACNGT 3 cut(s) 704, 1045, 1146
HpyCH4IV ACGT 3 cut(s) 314, 424, 750
HpyCH4V TGCA 8 cut(s) 47, 422, 782, 922, 1070, 1206, 1257, 1262
HpyF10VI GCNNNNNNNGC 7 cut(s) 12, 21, 24, 27, 30, 33, 785
HpyF3I CTNAG 4 cut(s) 183, 477, 672, 810
HpySE526I ACGT 3 cut(s) 314, 424, 750
Hsp92II CATG 8 cut(s) 40, 68, 464, 1117, 1136, 1247, 1297, 1321
KroI GCCGGC 1 cut(s) 267
KroNI GCCGGC 1 cut(s) 269
Kzo9I GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
LmnI GCTCC 2 cut(s) 176, 911
Lsp1109I GCAGC 9 cut(s) 33, 36, 39, 42, 45, 586, 766, 1228, 1241
LweI GCATC 3 cut(s) 601, 791, 1171
MaeI CTAG 4 cut(s) 522, 789, 797, 936
MaeII ACGT 3 cut(s) 314, 424, 750
MaeIII GTNAC 4 cut(s) 516, 746, 1128, 1146
MalI GATC 6 cut(s) 77, 188, 356, 546, 774, 1119
MbiI CCGCTC 1 cut(s) 171
MboI GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
MflI RGATCY 1 cut(s) 1117
MhlI GDGCHC 4 cut(s) 155, 210, 338, 424
MlyI GAGTC 2 cut(s) 152, 1291
Mph1103I ATGCAT 2 cut(s) 1208, 1264
MroNI GCCGGC 1 cut(s) 267
MroXI GAANNNNTTC 2 cut(s) 822, 1052
MseI TTAA 2 cut(s) 663, 1248
MslI CAYNNNNRTG 1 cut(s) 69
MspA1I CMGCKG 2 cut(s) 779, 907
MspI CCGG 3 cut(s) 268, 307, 761
MspR9I CCNGG 3 cut(s) 87, 211, 761
Mva1269I GAATGC 1 cut(s) 1208
MvaI CCWGG 2 cut(s) 87, 211
MwoI GCNNNNNNNGC 7 cut(s) 12, 21, 24, 27, 30, 33, 785
NaeI GCCGGC 1 cut(s) 269
NciI CCSGG 1 cut(s) 761
NdeII GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
NgoMIV GCCGGC 1 cut(s) 267
NlaIII CATG 8 cut(s) 40, 68, 464, 1117, 1136, 1247, 1297, 1321
NlaIV GGNNCC 2 cut(s) 154, 487
NmuCI GTSAC 3 cut(s) 516, 746, 1146
NsiI ATGCAT 2 cut(s) 1208, 1264
NspI RCATGY 2 cut(s) 1136, 1247
NspV TTCGAA 2 cut(s) 1056, 1167
PasI CCCWGGG 1 cut(s) 210
PciI ACATGT 2 cut(s) 1132, 1243
PctI GAATGC 1 cut(s) 1208
PdiI GCCGGC 1 cut(s) 269
PdmI GAANNNNTTC 2 cut(s) 822, 1052
PfeI GAWTC 3 cut(s) 368, 569, 616
PfoI TCCNGGA 1 cut(s) 759
PleI GAGTC 2 cut(s) 152, 1291
PmaCI CACGTG 1 cut(s) 425
PmlI CACGTG 1 cut(s) 425
PpsI GAGTC 2 cut(s) 152, 1291
Ppu21I YACGTR 2 cut(s) 315, 425
PscI ACATGT 2 cut(s) 1132, 1243
PsiI TTATAA 1 cut(s) 528
Psp6I CCWGG 2 cut(s) 85, 209
PspCI CACGTG 1 cut(s) 425
PspEI GGTNACC 1 cut(s) 516
PspFI CCCAGC 1 cut(s) 907
PspGI CCWGG 2 cut(s) 85, 209
PspN4I GGNNCC 2 cut(s) 154, 487
PspPI GGNCC 3 cut(s) 270, 309, 428
PstI CTGCAG 1 cut(s) 49
PstNI CAGNNNCTG 1 cut(s) 476
PsuI RGATCY 1 cut(s) 1117
PvuII CAGCTG 2 cut(s) 779, 907
RsaI GTAC 1 cut(s) 203
RsaNI GTAC 1 cut(s) 202
RseI CAYNNNNRTG 1 cut(s) 69
SaqAI TTAA 2 cut(s) 663, 1248
Sau3AI GATC 6 cut(s) 75, 186, 354, 544, 772, 1117
Sau96I GGNCC 3 cut(s) 270, 309, 428
SchI GAGTC 2 cut(s) 152, 1291
ScrFI CCNGG 3 cut(s) 87, 211, 761
SduI GDGCHC 4 cut(s) 155, 210, 338, 424
SfaNI GCATC 3 cut(s) 601, 791, 1171
SfcI CTRYAG 1 cut(s) 45
SfuI TTCGAA 2 cut(s) 1056, 1167
SinI GGWCC 1 cut(s) 309
SmiMI CAYNNNNRTG 1 cut(s) 69
SmlI CTYRAG 1 cut(s) 1083
SmoI CTYRAG 1 cut(s) 1083
SpeI ACTAGT 1 cut(s) 935
SsiI CCGC 6 cut(s) 15, 18, 169, 301, 555, 848
SspI AATATT 2 cut(s) 1189, 1238
SspMI CTAG 4 cut(s) 522, 789, 797, 936
StyD4I CCNGG 3 cut(s) 85, 209, 759
TaaI ACNGT 3 cut(s) 704, 1045, 1146
TaiI ACGT 3 cut(s) 317, 427, 753
TaqI TCGA 3 cut(s) 189, 1056, 1167
TaqII GACCGA 1 cut(s) 461
TauI GCSGC 4 cut(s) 18, 21, 303, 558
TfiI GAWTC 3 cut(s) 368, 569, 616
Tru1I TTAA 2 cut(s) 663, 1248
Tru9I TTAA 2 cut(s) 663, 1248
TscAI CASTG 2 cut(s) 13, 633
TseFI GTSAC 3 cut(s) 516, 746, 1146
TseI GCWGC 9 cut(s) 21, 24, 27, 30, 33, 599, 779, 1216, 1254
Tsp45I GTSAC 3 cut(s) 516, 746, 1146
TspDTI ATGAA 5 cut(s) 53, 753, 1035, 1215, 1248
TspGWI ACGGA 1 cut(s) 163
TspRI CASTG 2 cut(s) 13, 633
VneI GTGCAC 1 cut(s) 420
VpaK11BI GGWCC 1 cut(s) 309
XapI RAATTY 5 cut(s) 95, 755, 822, 829, 1163
XbaI TCTAGA 1 cut(s) 796
XceI RCATGY 2 cut(s) 1136, 1247
XcmI CCANNNNNNNNNTGG 1 cut(s) 380
XmnI GAANNNNTTC 2 cut(s) 822, 1052
XspI CTAG 4 cut(s) 522, 789, 797, 936
Zsp2I ATGCAT 2 cut(s) 1208, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.