Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000197

Physical Location & Seq

Genomic Coordinates Forward (+)

40662407 .. 40664012

Gene Structure 1606 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0290900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCAAAAGAGCTTCATGTTGTGATTCTTCCATGGTCTGCCTTTGGCCATATCATCCCTTTGATTCAACTCTCCATAGCCTTAGCAAAAGCCAAGATTCATGTCTCCTTCATATCTACCCCCAAAAACATCCAAAGGCTCCCTAAAATCCCACCTGAGTTGCAATCTCTCATAACAATAGTGCCTTTTCCTTTGCCAATTTTGGATGCTGCAGATCGGCTGTTGCCTGAAGGCGCCGAGGCCACGGTGGACATACCTTTCGAGAAAATGGACGACTTGAATTTTGCATTTGATCTTCTACGACAACCCTTTAAGCAATTCATTGCTGATCAAGTGCCGGATTGGATCATCACCGATTTTGCTGCCCACTGGGCGGTTGACGTTGCCAGAGAGTATGGTGTTCCTGTTGCCTACTTCTCTCCTTTCTCTGCTGCTACGCATGTCTTCTGTGGTTCACCGGAATATCTCTCTCATGTTCCACCATCACCGGAAGTATTCACCTCCCCACCGGAGTGGGTTCCTTTTCCGTCTTTGTTAGCACTCAAGGAGTTTGAGGAAGTTCATTTTCTTGGCTTTTTTAATGTGAATCGTTCAGGGATAAGTGATGCTGAAAGGGTTGCCAAGATTGTATCAGCGAGTCAAGTACTAGCCTTTCGTAGTTGCAATGAAATTGAAGGAGAGTACTTGGATTTGTACTCGAAACTCACCGGAAAACCTGTGATTCCCACCGGTTTGCTACCTCCAAAGGAATCAAAAAGGGAGTCGGGGAACGATGTGATTTTTGAGTGGCTTGATAAGCAGAAACCCAGGTCAGTTGTGTTTGTTGGGTTTGGGAGTGAGTGTAAGGTGAGCAAAGAACAAGTGTATGAGATAGCTCATGGTCTGGAGCTTTCAGAGTTGCCATTTCTCTGGGCACTCAGAAAACCCAGTTGGGCTAGTACTGATGCTGAGGCTCTACCTCTAGGTTTTGTGGACAGAACATCAAAGAAAGGCCTTGTTTGCATGGGATGGGTGCCACAAATCGAAATTCTGGGGCACCCATCAATCGGGGGTTCTCTGTTTCACTCTGGATGGGGTTCTGTGATTGAAACTCTGCAATTTGGGCATTGCCTTGTTGTGTTACCCTTAATTGCTGATCAGCCTCTGAATGCAAGGCTTCTGGTGGAGAAGGGTCTGGCTGCCGAAGTGAAACGCAACGAAGATGGGTCGTTTACTGCAGACGACATAGCCAAAACACTGAGGCTAGCAATGGTGGAAGAGGAAGGAGAGCACCTGAGAATCAATGCAAGGAAAGCTGCAGCTGTTTTTGGAGATGAGAAGCTGCACCAAGACCACTATCTTGGTGCATTTGTTGATTATCTCAAGAATAATGGTAGAAAAGGTCTTCTAGACAAGAATGATGACCCTATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005886 GO:0006355 GO:0008150 GO:0009889 GO:0009891 GO:0009893 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0060255 GO:0065007 GO:0071944 GO:0080090 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

470

Amino Acids

52.17

Weight (kDa)

5.38

Isoelectric Point (pI)

45.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	270 - 415	2.3e-17	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000197)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_7g18010 FvH4_7g18010 FvH4_7g18021 FvH4_7g18070 FvH4_7g18070 FvH4_7g18200 FvH4_7g18250
malus_domestica	MD01G1092200.v1.1 MD01G1092500.v1.1 MD01G1092600.v1.1 MD01G1092900.v1.1 MD01G1093000.v1.1 MD01G1093200.v1.1 MD01G1093500.v1.1 MD01G1093700.v1.1 MD01G1093800.v1.1 MD01G1093900.v1.1 MD01G1094000.v1.1 MD01G1094200.v1.1 MD01G1094400.v1.1 MD01G1094500.v1.1 MD01G1094700.v1.1 MD01G1094800.v1.1 MD01G1095100.v1.1 MD07G1162700.v1.1 MD07G1163200.v1.1 MD07G1163400.v1.1 MD07G1163700.v1.1 MD07G1164000.v1.1 MD10G1186100.v1.1
prunus_persica	Prupe.2G201200_v2.0.a1 Prupe.2G201200_v2.0.a1 Prupe.2G201300_v2.0.a1 Prupe.2G201800_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202000_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202500_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202700_v2.0.a1 Prupe.2G202800_v2.0.a1 Prupe.2G202900_v2.0.a1 Prupe.2G203000_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204700_v2.0.a1 Prupe.2G204900_v2.0.a1
pyrus_communis	pycom01g11610 pycom01g11650 pycom01g11670 pycom01g11680 pycom01g11700 pycom01g11710 pycom01g11720 pycom01g11730 pycom07g15770 pycom07g15860 pycom07g15870 pycom07g15890 pycom07g15900 pycom07g15920
rosa_chinensis	RchiOBHm_Chr1g0333731 RchiOBHm_Chr1g0361411 RchiOBHm_Chr1g0361501 RchiOBHm_Chr1g0361551 RchiOBHm_Chr1g0361631 RchiOBHm_Chr1g0361691 RchiOBHm_Chr1g0361701
rosa_laevigata	RLG00000011640 RLG00000014882 RLG00000027709 RLG00000027713 RLG00000027717 RLG00000027719 RLG00000029532 RLG00000030171 RLG00000030174 RLG00000030177 RLG00000030181 RLG00000030186
rosa_multiflora	Rmu_co8135790.1_g000001 Rmu_co8371689.1_g000001 Rmu_co8391943.1_g000001 Rmu_co8469521.1_g000001 Rmu_co8502503.1_g000002 Rmu_sc0001034.1_g000001 Rmu_sc0002119.1_g000002 Rmu_sc0002119.1_g000009 Rmu_sc0002119.1_g000019 Rmu_sc0003426.1_g000005 Rmu_sc0003693.1_g000010 Rmu_sc0003704.1_g000007 Rmu_sc0006101.1_g000005 Rmu_sc0006417.1_g000006 Rmu_sc0007217.1_g000012 Rmu_sc0010384.1_g000001 Rmu_sc0011258.1_g000003 Rmu_sc0017253.1_g000002 Rmu_ssc0000062.1_g000022
rosa_roxburghii	Rroxscaffold_159G00432930 Rroxscaffold_159G00433040 Rroxscaffold_159G00433060 Rroxscaffold_4G00294780 Rroxscaffold_4G00294810 Rroxscaffold_4G00294870 Rroxscaffold_4G00294930 Rroxscaffold_4G00294950 Rroxscaffold_4G00317240 Rroxscaffold_4G00325190 Rroxscaffold_4G00325210
rosa_rugosa	Rorug01G0047400 Rorug01G0047800 Rorug01G0048100 Rorug01G0048100 Rorug01G0111500 Rorug01G0111500 Rorug01G0289800 Rorug01G0290300 Rorug01G0290700 Rorug01G0290900
rosa_samantha	Rh1AG063000 Rh1AG064000 Rh1AG064400 Rh1AG133700 Rh1AG300300 Rh1AG300900 Rh1AG301000 Rh1AG301100 Rh1BG263800 Rh1BG264000 Rh1BG264100 Rh1CG281800 Rh1CG282100 Rh1CG282200 Rh1DG294000 Rh1DG294100 Rh5BG200600
rosa_wichuraiana	Rw1G005400 Rw1G011170 Rw1G026570 Rw1G026580 Rw1G026610 Rw1G026640 Rw1G026670 Rw1G026700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	233, 1012, 1035
AciI	CCGC	1 cut(s)	374
AclWI	GGATC	1 cut(s)	353
AcoI	YGGCCR	1 cut(s)	46
AcsI	RAATTY	2 cut(s)	280, 1026
AcuI	CTGAAG	1 cut(s)	249
AcyI	GRCGYC	1 cut(s)	234
AfaI	GTAC	4 cut(s)	645, 683, 695, 940
AfiI	CCNNNNNNNGG	2 cut(s)	373, 1046
AgeI	ACCGGT	1 cut(s)	728
AgsI	TTSAA	4 cut(s)	68, 280, 674, 1088
AjnI	CCWGG	1 cut(s)	806
AjuI	GAANNNNNNNTTGG	2 cut(s)	913, 945
AleI	CACNNNNGTG	1 cut(s)	511
AluBI	AGCT	6 cut(s)	13, 875, 889, 1295, 1301, 1321
AluI	AGCT	6 cut(s)	13, 875, 889, 1295, 1301, 1321
Alw21I	GWGCWC	1 cut(s)	1272
Alw26I	GTCTC	1 cut(s)	109
AlwI	GGATC	1 cut(s)	353
AlwNI	CAGNNNCTG	1 cut(s)	1144
AoxI	GGCC	3 cut(s)	46, 240, 991
ApeKI	GCWGC	7 cut(s)	209, 362, 431, 1178, 1295, 1298, 1321
ApoI	RAATTY	2 cut(s)	280, 1026
ArsI	GACNNNNNNTTYG	6 cut(s)	242, 266, 274, 298, 746, 778
AsiGI	ACCGGT	1 cut(s)	728
AspLEI	GCGC	1 cut(s)	236
AsuHPI	GGTGA	6 cut(s)	343, 447, 477, 490, 697, 859
AsuNHI	GCTAGC	1 cut(s)	1243
BaeGI	GKGCMC	2 cut(s)	916, 1038
BalI	TGGCCA	1 cut(s)	48
BanI	GGYRCC	3 cut(s)	233, 1012, 1035
BbsI	GAAGAC	2 cut(s)	436, 1376
Bbv12I	GWGCWC	1 cut(s)	1272
BbvCI	CCTCAGC	1 cut(s)	948
BbvI	GCAGC	7 cut(s)	196, 349, 418, 1165, 1282, 1308, 1310
BccI	CCATC	5 cut(s)	490, 1002, 1048, 1065, 1196
BcgI	CGANNNNNNTGC	2 cut(s)	344, 378
BciT130I	CCWGG	1 cut(s)	808
BclI	TGATCA	2 cut(s)	328, 1135
BcoDI	GTCTC	1 cut(s)	109
BfaI	CTAG	5 cut(s)	647, 936, 962, 1244, 1388
BfmI	CTRYAG	3 cut(s)	210, 1215, 1296
BfoI	RGCGCY	1 cut(s)	237
BglI	GCCNNNNNGGC	1 cut(s)	371
BisI	GCNGC	7 cut(s)	210, 363, 432, 1179, 1296, 1299, 1322
BlsI	GCNGC	7 cut(s)	211, 364, 433, 1180, 1297, 1300, 1323
BmcAI	AGTACT	3 cut(s)	645, 683, 940
Bme1390I	CCNGG	1 cut(s)	808
BmiI	GGNNCC	5 cut(s)	140, 235, 519, 1014, 1037
BmrFI	CCNGG	1 cut(s)	808
BmrI	ACTGGG	2 cut(s)	379, 921
BmsI	GCATC	3 cut(s)	196, 595, 934
BmtI	GCTAGC	1 cut(s)	1247
BmuI	ACTGGG	2 cut(s)	379, 921
BpiI	GAAGAC	2 cut(s)	436, 1376
BpmI	CTGGAG	1 cut(s)	905
Bpu10I	CCTNAGC	2 cut(s)	82, 948
BpuEI	CTTGAG	2 cut(s)	527, 1346
BsaHI	GRCGYC	1 cut(s)	234
BsaJI	CCNNGG	4 cut(s)	32, 237, 243, 806
BsaWI	WCCGGW	5 cut(s)	457, 487, 508, 707, 728
BsaXI	ACNNNNNCTCC	2 cut(s)	826, 856
Bsc4I	CCNNNNNNNGG	2 cut(s)	373, 1046
Bse118I	RCCGGY	1 cut(s)	728
Bse1I	ACTGG	2 cut(s)	374, 927
Bse3DI	GCAATG	4 cut(s)	321, 670, 1105, 1254
BseBI	CCWGG	1 cut(s)	808
BseDI	CCNNGG	4 cut(s)	32, 237, 243, 806
BseGI	GGATG	5 cut(s)	54, 129, 211, 1013, 1076
BseLI	CCNNNNNNNGG	2 cut(s)	373, 1046
BseMI	GCAATG	4 cut(s)	321, 670, 1105, 1254
BseMII	CTCAG	5 cut(s)	147, 931, 939, 1229, 1265
BseNI	ACTGG	2 cut(s)	374, 927
BseSI	GKGCMC	2 cut(s)	916, 1038
BseXI	GCAGC	7 cut(s)	196, 349, 418, 1165, 1282, 1308, 1310
BsgI	GTGCAG	1 cut(s)	1307
BshFI	GGCC	3 cut(s)	48, 242, 993
BshNI	GGYRCC	3 cut(s)	233, 1012, 1035
BshTI	ACCGGT	1 cut(s)	728
BsiHKAI	GWGCWC	1 cut(s)	1272
BsiSI	CCGG	6 cut(s)	338, 458, 488, 509, 708, 729
BslI	CCNNNNNNNGG	2 cut(s)	373, 1046
BsmAI	GTCTC	1 cut(s)	109
BsmI	GAATGC	1 cut(s)	1153
BsnI	GGCC	3 cut(s)	48, 242, 993
Bsp1286I	GDGCHC	3 cut(s)	916, 1038, 1272
Bsp143I	GATC	5 cut(s)	214, 292, 328, 345, 1135
Bsp19I	CCATGG	1 cut(s)	32
BspACI	CCGC	1 cut(s)	374
BspANI	GGCC	3 cut(s)	48, 242, 993
BspCNI	CTCAG	5 cut(s)	148, 930, 940, 1230, 1266
BspLI	GGNNCC	5 cut(s)	140, 235, 519, 1014, 1037
BspMAI	CTGCAG	3 cut(s)	214, 1219, 1300
BspOI	GCTAGC	1 cut(s)	1247
BspPI	GGATC	1 cut(s)	353
BspT107I	GGYRCC	3 cut(s)	233, 1012, 1035
BsrDI	GCAATG	4 cut(s)	321, 670, 1105, 1254
BsrFI	RCCGGY	1 cut(s)	728
BsrI	ACTGG	2 cut(s)	374, 927
BssAI	RCCGGY	1 cut(s)	728
BssECI	CCNNGG	4 cut(s)	32, 237, 243, 806
BssMI	GATC	5 cut(s)	214, 292, 328, 345, 1135
BssNI	GRCGYC	1 cut(s)	234
BssT1I	CCWWGG	1 cut(s)	32
Bst2UI	CCWGG	1 cut(s)	808
Bst4CI	ACNGT	1 cut(s)	247
Bst6I	CTCTTC	1 cut(s)	1251
BstACI	GRCGYC	1 cut(s)	234
BstC8I	GCNNGC	1 cut(s)	1245
BstDEI	CTNAG	6 cut(s)	82, 156, 917, 948, 1238, 1274
BstDSI	CCRYGG	2 cut(s)	32, 243
BstF5I	GGATG	5 cut(s)	54, 129, 211, 1013, 1076
BstH2I	RGCGCY	1 cut(s)	237
BstHHI	GCGC	1 cut(s)	236
BstKTI	GATC	5 cut(s)	217, 295, 331, 348, 1138
BstMAI	GTCTC	1 cut(s)	109
BstMBI	GATC	5 cut(s)	214, 292, 328, 345, 1135
BstMWI	GCNNNNNNNGC	5 cut(s)	371, 796, 999, 1102, 1292
BstNI	CCWGG	1 cut(s)	808
BstNSI	RCATGY	1 cut(s)	443
BstSCI	CCNGG	1 cut(s)	806
BstSFI	CTRYAG	3 cut(s)	210, 1215, 1296
BstSLI	GKGCMC	2 cut(s)	916, 1038
BstV1I	GCAGC	7 cut(s)	196, 349, 418, 1165, 1282, 1308, 1310
BstV2I	GAAGAC	2 cut(s)	436, 1376
BstXI	CCANNNNNNTGG	3 cut(s)	513, 909, 1340
BsuRI	GGCC	3 cut(s)	48, 242, 993
BtgI	CCRYGG	2 cut(s)	32, 243
BtsCI	GGATG	5 cut(s)	54, 129, 211, 1013, 1076
BtsIMutI	CAGTG	2 cut(s)	367, 1235
Cac8I	GCNNGC	1 cut(s)	1245
CaiI	CAGNNNCTG	1 cut(s)	1144
CfoI	GCGC	1 cut(s)	236
Cfr10I	RCCGGY	1 cut(s)	728
Csp6I	GTAC	4 cut(s)	644, 682, 694, 939
CspAI	ACCGGT	1 cut(s)	728
CspCI	CAANNNNNGTGG	2 cut(s)	141, 176
CviAII	CATG	7 cut(s)	17, 33, 101, 440, 473, 878, 1003
CviQI	GTAC	4 cut(s)	644, 682, 694, 939
DdeI	CTNAG	6 cut(s)	82, 156, 917, 948, 1238, 1274
DinI	GGCGCC	1 cut(s)	235
DpnI	GATC	5 cut(s)	216, 294, 330, 347, 1137
DpnII	GATC	5 cut(s)	214, 292, 328, 345, 1135
EaeI	YGGCCR	1 cut(s)	46
Eam1104I	CTCTTC	1 cut(s)	1251
EarI	CTCTTC	1 cut(s)	1251
Eco130I	CCWWGG	1 cut(s)	32
Eco147I	AGGCCT	1 cut(s)	993
Eco57I	CTGAAG	1 cut(s)	249
EcoRII	CCWGG	1 cut(s)	806
EcoT14I	CCWWGG	1 cut(s)	32
EgeI	GGCGCC	1 cut(s)	235
EheI	GGCGCC	1 cut(s)	235
ErhI	CCWWGG	1 cut(s)	32
FaeI	CATG	7 cut(s)	20, 36, 104, 443, 476, 881, 1006
FatI	CATG	7 cut(s)	16, 32, 100, 439, 472, 877, 1002
FbaI	TGATCA	2 cut(s)	328, 1135
Fnu4HI	GCNGC	7 cut(s)	210, 363, 432, 1179, 1296, 1299, 1322
FokI	GGATG	5 cut(s)	41, 116, 218, 1020, 1083
Fsp4HI	GCNGC	7 cut(s)	210, 363, 432, 1179, 1296, 1299, 1322
FspBI	CTAG	5 cut(s)	647, 936, 962, 1244, 1388
GlaI	GCGC	1 cut(s)	235
GluI	GCNGC	7 cut(s)	210, 363, 432, 1179, 1296, 1299, 1322
GsuI	CTGGAG	1 cut(s)	905
HaeII	RGCGCY	1 cut(s)	237
HaeIII	GGCC	3 cut(s)	48, 242, 993
HapII	CCGG	6 cut(s)	338, 458, 488, 509, 708, 729
HhaI	GCGC	1 cut(s)	236
Hin1I	GRCGYC	1 cut(s)	234
Hin1II	CATG	7 cut(s)	20, 36, 104, 443, 476, 881, 1006
Hin6I	GCGC	1 cut(s)	234
HinP1I	GCGC	1 cut(s)	234
HincII	GTYRAC	1 cut(s)	379
HindII	GTYRAC	1 cut(s)	379
HinfI	GANTC	9 cut(s)	25, 64, 97, 586, 637, 721, 749, 761, 1278
HpaII	CCGG	6 cut(s)	338, 458, 488, 509, 708, 729
HphI	GGTGA	6 cut(s)	343, 447, 477, 490, 697, 859
Hpy166II	GTNNAC	5 cut(s)	250, 379, 455, 973, 1212
Hpy188I	TCNGA	3 cut(s)	895, 920, 1146
Hpy188III	TCNNGA	5 cut(s)	262, 884, 1068, 1363, 1388
Hpy8I	GTNNAC	5 cut(s)	250, 379, 455, 973, 1212
HpyAV	CCTTC	5 cut(s)	118, 224, 668, 1162, 1256
HpyCH4III	ACNGT	1 cut(s)	247
HpyCH4IV	ACGT	1 cut(s)	381
HpyF10VI	GCNNNNNNNGC	5 cut(s)	371, 796, 999, 1102, 1292
HpyF3I	CTNAG	6 cut(s)	82, 156, 917, 948, 1238, 1274
HpySE526I	ACGT	1 cut(s)	381
Hsp92I	GRCGYC	1 cut(s)	234
Hsp92II	CATG	7 cut(s)	20, 36, 104, 443, 476, 881, 1006
HspAI	GCGC	1 cut(s)	234
KasI	GGCGCC	1 cut(s)	233
Ksp22I	TGATCA	2 cut(s)	328, 1135
Kzo9I	GATC	5 cut(s)	214, 292, 328, 345, 1135
LmnI	GCTCC	2 cut(s)	144, 886
Lsp1109I	GCAGC	7 cut(s)	196, 349, 418, 1165, 1282, 1308, 1310
LweI	GCATC	3 cut(s)	196, 595, 934
MaeI	CTAG	5 cut(s)	647, 936, 962, 1244, 1388
MaeII	ACGT	1 cut(s)	381
MaeIII	GTNAC	1 cut(s)	1119
MalI	GATC	5 cut(s)	216, 294, 330, 347, 1137
MboI	GATC	5 cut(s)	214, 292, 328, 345, 1135
MboII	GAAGA	6 cut(s)	20, 287, 436, 1211, 1268, 1376
MhlI	GDGCHC	3 cut(s)	916, 1038, 1272
MlsI	TGGCCA	1 cut(s)	48
MluCI	AATT	7 cut(s)	198, 280, 317, 669, 1026, 1097, 1128
MluNI	TGGCCA	1 cut(s)	48
Mly113I	GGCGCC	1 cut(s)	234
MlyI	GAGTC	2 cut(s)	646, 770
MnlI	CCTC	9 cut(s)	232, 511, 547, 750, 943, 969, 1152, 1233, 1252
Mox20I	TGGCCA	1 cut(s)	48
MscI	TGGCCA	1 cut(s)	48
MseI	TTAA	3 cut(s)	312, 579, 1127
MslI	CAYNNNNRTG	1 cut(s)	511
Msp20I	TGGCCA	1 cut(s)	48
MspA1I	CMGCKG	1 cut(s)	1301
MspI	CCGG	6 cut(s)	338, 458, 488, 509, 708, 729
MspR9I	CCNGG	1 cut(s)	808
Mva1269I	GAATGC	1 cut(s)	1153
MvaI	CCWGG	1 cut(s)	808
MwoI	GCNNNNNNNGC	5 cut(s)	371, 796, 999, 1102, 1292
NarI	GGCGCC	1 cut(s)	234
NcoI	CCATGG	1 cut(s)	32
NdeII	GATC	5 cut(s)	214, 292, 328, 345, 1135
NheI	GCTAGC	1 cut(s)	1243
NlaIII	CATG	7 cut(s)	20, 36, 104, 443, 476, 881, 1006
NlaIV	GGNNCC	5 cut(s)	140, 235, 519, 1014, 1037
NmeAIII	GCCGAG	1 cut(s)	262
NspI	RCATGY	1 cut(s)	443
OliI	CACNNNNGTG	1 cut(s)	511
PceI	AGGCCT	1 cut(s)	993
PctI	GAATGC	1 cut(s)	1153
PfeI	GAWTC	7 cut(s)	25, 64, 97, 586, 721, 749, 1278
PinAI	ACCGGT	1 cut(s)	728
PkrI	GCNGC	7 cut(s)	211, 364, 433, 1180, 1297, 1300, 1323
PleI	GAGTC	2 cut(s)	645, 769
PluTI	GGCGCC	1 cut(s)	237
PpsI	GAGTC	2 cut(s)	645, 769
Psp6I	CCWGG	1 cut(s)	806
PspGI	CCWGG	1 cut(s)	806
PspN4I	GGNNCC	5 cut(s)	140, 235, 519, 1014, 1037
PstI	CTGCAG	3 cut(s)	214, 1219, 1300
PstNI	CAGNNNCTG	1 cut(s)	1144
PvuII	CAGCTG	1 cut(s)	1301
RsaI	GTAC	4 cut(s)	645, 683, 695, 940
RsaNI	GTAC	4 cut(s)	644, 682, 694, 939
RseI	CAYNNNNRTG	1 cut(s)	511
SaqAI	TTAA	3 cut(s)	312, 579, 1127
SatI	GCNGC	7 cut(s)	210, 363, 432, 1179, 1296, 1299, 1322
Sau3AI	GATC	5 cut(s)	214, 292, 328, 345, 1135
ScaI	AGTACT	3 cut(s)	645, 683, 940
SchI	GAGTC	2 cut(s)	646, 770
ScrFI	CCNGG	1 cut(s)	808
SduI	GDGCHC	3 cut(s)	916, 1038, 1272
SfaNI	GCATC	3 cut(s)	196, 595, 934
SfcI	CTRYAG	3 cut(s)	210, 1215, 1296
SfoI	GGCGCC	1 cut(s)	235
SmiMI	CAYNNNNRTG	1 cut(s)	511
SmlI	CTYRAG	2 cut(s)	542, 1361
SmoI	CTYRAG	2 cut(s)	542, 1361
Sse9I	AATT	7 cut(s)	198, 280, 317, 669, 1026, 1097, 1128
SseBI	AGGCCT	1 cut(s)	993
SsiI	CCGC	1 cut(s)	374
SspDI	GGCGCC	1 cut(s)	233
SspMI	CTAG	5 cut(s)	647, 936, 962, 1244, 1388
StuI	AGGCCT	1 cut(s)	993
StyD4I	CCNGG	1 cut(s)	806
StyI	CCWWGG	1 cut(s)	32
TaaI	ACNGT	1 cut(s)	247
TaiI	ACGT	1 cut(s)	384
TaqI	TCGA	3 cut(s)	261, 698, 1023
TasI	AATT	7 cut(s)	198, 280, 317, 669, 1026, 1097, 1128
TatI	WGTACW	4 cut(s)	643, 681, 693, 938
TfiI	GAWTC	7 cut(s)	25, 64, 97, 586, 721, 749, 1278
Tru1I	TTAA	3 cut(s)	312, 579, 1127
Tru9I	TTAA	3 cut(s)	312, 579, 1127
TscAI	CASTG	2 cut(s)	374, 1242
TseI	GCWGC	7 cut(s)	209, 362, 431, 1178, 1295, 1298, 1321
TspDTI	ATGAA	6 cut(s)	5, 89, 100, 310, 551, 681
TspGWI	ACGGA	1 cut(s)	516
TspRI	CASTG	2 cut(s)	374, 1242
XapI	RAATTY	2 cut(s)	280, 1026
XbaI	TCTAGA	1 cut(s)	1387
XceI	RCATGY	1 cut(s)	443
XspI	CTAG	5 cut(s)	647, 936, 962, 1244, 1388
ZrmI	AGTACT	3 cut(s)	645, 683, 940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.